SEQ2FUN

BioLiP
Download all results in tab-seperated text for 942758 receptor-ligand interactions, whose format is explained at readme.txt.
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    # PDB
    (Resolution Å)
    Site # Ligand EC number GO terms UniProt PubMed Binding
    affinity
    379001 5mei:Q (3.5) BS02 rna ? GO:0000028 ... Q01855 28457705
    379002 5mei:Q (3.5) BS03 OHX ? GO:0000028 ... Q01855 28457705
    379003 5mei:R (3.5) BS01 rna ? GO:0000462 ... P0CX51 28457705
    379004 5mei:S (3.5) BS01 rna ? GO:0000028 ... P14127 28457705
    379005 5mei:T (3.5) BS01 rna ? GO:0000054 ... P0CX55 28457705
    379006 5mei:T (3.5) BS02 OHX ? GO:0000054 ... P0CX55 28457705
    379007 5mei:U (3.5) BS01 rna ? GO:0000028 ... P07280 28457705
    379008 5mei:V (3.5) BS01 rna ? GO:0000462 ... P38701 28457705
    379009 5mei:X (3.5) BS01 rna ? GO:0002181 ... P0C0W1 28457705
    379010 5mei:Y (3.5) BS01 rna ? GO:0000462 ... P0CX29 28457705
    379011 5mei:Z (3.5) BS01 rna ? GO:0000462 ... P0CX31 28457705
    379012 5mei:a (3.5) BS01 rna ? N/A Q3E792 28457705
    379013 5mei:b (3.5) BS01 rna ? GO:0003735 ... P39939 28457705
    379014 5mei:b (3.5) BS02 MG ? GO:0003735 ... P39939 28457705
    379015 5mei:b (3.5) BS03 ZN ? GO:0003735 ... P39939 28457705
    379016 5mei:c (3.5) BS01 rna ? GO:0000028 ... P35997 28457705
    379017 5mei:c0 (3.5) BS01 rna ? GO:0000054 ... Q08745 28457705
    379018 5mei:c1 (3.5) BS01 rna ? GO:0000028 ... P0CX47 28457705
    379019 5mei:c2 (3.5) BS01 rna ? GO:0003735 ... P48589 28457705
    379020 5mei:c3 (3.5) BS01 rna ? GO:0000462 ... P05756 28457705
    379021 5mei:c3 (3.5) BS02 rna ? GO:0000462 ... P05756 28457705
    379022 5mei:c3 (3.5) BS03 OHX ? GO:0000462 ... P05756 28457705
    379023 5mei:c4 (3.5) BS01 rna ? GO:0000028 ... P39516 28457705
    379024 5mei:c5 (3.5) BS01 rna ? GO:0000028 ... Q01855 28457705
    379025 5mei:c5 (3.5) BS02 OHX ? GO:0000028 ... Q01855 28457705
    379026 5mei:c6 (3.5) BS01 rna ? GO:0000462 ... P0CX51 28457705
    379027 5mei:c7 (3.5) BS01 rna ? GO:0003735 ... P02407 28457705
    379028 5mei:c8 (3.5) BS01 rna ? GO:0000054 ... P0CX55 28457705
    379029 5mei:c9 (3.5) BS01 rna ? GO:0000028 ... P07280 28457705
    379030 5mei:c9 (3.5) BS02 MG ? GO:0000028 ... P07280 28457705
    379031 5mei:d (3.5) BS01 rna ? GO:0000028 ... Q3E7X9 28457705
    379032 5mei:d0 (3.5) BS01 rna ? GO:0000462 ... P38701 28457705
    379033 5mei:d2 (3.5) BS01 rna ? GO:0002181 ... P0C0W1 28457705
    379034 5mei:d3 (3.5) BS01 rna ? GO:0000462 ... P0CX29 28457705
    379035 5mei:d4 (3.5) BS01 rna ? GO:0000462 ... P0CX31 28457705
    379036 5mei:d4 (3.5) BS02 OHX ? GO:0000462 ... P0CX31 28457705
    379037 5mei:d5 (3.5) BS01 rna ? N/A Q3E792 28457705
    379038 5mei:d6 (3.5) BS01 rna ? GO:0003735 ... P39939 28457705
    379039 5mei:d6 (3.5) BS02 ZN ? GO:0003735 ... P39939 28457705
    379040 5mei:d7 (3.5) BS01 rna ? GO:0000028 ... P35997 28457705
    379041 5mei:d7 (3.5) BS02 ZN ? GO:0000028 ... P35997 28457705
    379042 5mei:d8 (3.5) BS01 rna ? GO:0000028 ... Q3E7X9 28457705
    379043 5mei:d9 (3.5) BS01 rna ? GO:0002181 ... P41057 28457705
    379044 5mei:d9 (3.5) BS02 OHX ? GO:0002181 ... P41057 28457705
    379045 5mei:d9 (3.5) BS03 ZN ? GO:0002181 ... P41057 28457705
    379046 5mei:e (3.5) BS01 rna ? GO:0002181 ... P41057 28457705
    379047 5mei:e (3.5) BS02 OHX ? GO:0002181 ... P41057 28457705
    379048 5mei:e (3.5) BS03 ZN ? GO:0002181 ... P41057 28457705
    379049 5mei:e0 (3.5) BS01 rna ? GO:0002181 ... P0CX33 28457705
    379050 5mei:e1 (3.5) BS01 rna ? GO:0003735 ... P05759 28457705
    379051 5mei:e1 (3.5) BS02 ZN ? GO:0003735 ... P05759 28457705
    379052 5mei:f (3.5) BS01 rna ? GO:0002181 ... P0CX33 28457705
    379053 5mei:g (3.5) BS01 rna ? GO:0003735 ... P05759 28457705
    379054 5mei:g (3.5) BS02 ZN ? GO:0003735 ... P05759 28457705
    379055 5mei:h (3.5) BS01 rna ? GO:0001965 ... P38011 28457705
    379056 5mei:h (3.5) BS02 OHX ? GO:0001965 ... P38011 28457705
    379057 5mei:i (3.5) BS01 rna ? N/A P39015 28457705
    379058 5mei:i (3.5) BS02 rna ? N/A P39015 28457705
    379059 5mei:i (3.5) BS03 MG ? N/A P39015 28457705
    379060 5mei:j (3.5) BS01 rna ? GO:0002181 ... P0CX45 28457705
    379061 5mei:j (3.5) BS02 rna ? GO:0002181 ... P0CX45 28457705
    379062 5mei:j (3.5) BS03 MG ? GO:0002181 ... P0CX45 28457705
    379063 5mei:k (3.5) BS01 rna ? GO:0000027 ... P14126 28457705
    379064 5mei:k (3.5) BS02 MG ? GO:0000027 ... P14126 28457705
    379065 5mei:k (3.5) BS03 OHX ? GO:0000027 ... P14126 28457705
    379066 5mei:k (3.5) BS04 OHX ? GO:0000027 ... P14126 28457705
    379067 5mei:l (3.5) BS01 rna ? GO:0002181 ... P10664 28457705
    379068 5mei:l (3.5) BS02 rna ? GO:0002181 ... P10664 28457705
    379069 5mei:l (3.5) BS03 MG ? GO:0002181 ... P10664 28457705
    379070 5mei:l (3.5) BS04 OHX ? GO:0002181 ... P10664 28457705
    379071 5mei:l2 (3.5) BS01 rna ? GO:0002181 ... P0CX41 28457705
    379072 5mei:l2 (3.5) BS02 rna ? GO:0002181 ... P0CX41 28457705
    379073 5mei:m (3.5) BS01 rna ? GO:0000027 ... P26321 28457705
    379074 5mei:m (3.5) BS02 rna ? GO:0000027 ... P26321 28457705
    379075 5mei:n (3.5) BS01 rna ? GO:0000027 ... Q02326 28457705
    379076 5mei:n (3.5) BS02 OHX ? GO:0000027 ... Q02326 28457705
    379077 5mei:o (3.5) BS01 rna ? GO:0000463 ... P05737 28457705
    379078 5mei:o (3.5) BS02 rna ? GO:0000463 ... P05737 28457705
    379079 5mei:p (3.5) BS01 rna ? GO:0000470 ... P17076 28457705
    379080 5mei:p (3.5) BS02 rna ? GO:0000470 ... P17076 28457705
    379081 5mei:p0 (3.5) BS01 rna ? N/A P05317 28457705
    379082 5mei:q (3.5) BS01 rna ? GO:0002181 ... P05738 28457705
    379083 5mei:r (3.5) BS01 rna ? GO:0000027 ... P41805 28457705
    379084 5mei:r (3.5) BS02 rna ? GO:0000027 ... P41805 28457705
    379085 5mei:s (3.5) BS01 rna ? GO:0000027 ... Q3E757 28457705
    379086 5mei:s (3.5) BS02 rna ? GO:0000027 ... Q3E757 28457705
    379087 5mei:s0 (3.5) BS01 rna ? GO:0003735 ... P32905 28457705
    379088 5mei:s1 (3.5) BS01 rna ? GO:0003735 ... P33442 28457705
    379089 5mei:s1 (3.5) BS02 rna ? GO:0003735 ... P33442 28457705
    379090 5mei:s1 (3.5) BS03 OHX ? GO:0003735 ... P33442 28457705
    379091 5mei:s2 (3.5) BS01 rna ? GO:0003723 ... P25443 28457705
    379092 5mei:s3 (3.5) BS01 rna ? GO:0000054 ... P05750 28457705
    379093 5mei:s4 (3.5) BS01 rna ? GO:0002181 ... P0CX35 28457705
    379094 5mei:s4 (3.5) BS02 MG ? GO:0002181 ... P0CX35 28457705
    379095 5mei:s5 (3.5) BS01 rna ? GO:0000028 ... P26783 28457705
    379096 5mei:s6 (3.5) BS01 rna ? GO:0000462 ... P0CX37 28457705
    379097 5mei:s7 (3.5) BS01 rna ? GO:0002181 ... P26786 28457705
    379098 5mei:s8 (3.5) BS01 rna ? GO:0000462 ... P0CX39 28457705
    379099 5mei:s8 (3.5) BS02 rna ? GO:0000462 ... P0CX39 28457705
    379100 5mei:s8 (3.5) BS03 OHX ? GO:0000462 ... P0CX39 28457705
    379101 5mei:s9 (3.5) BS01 rna ? GO:0000462 ... O13516 28457705
    379102 5mei:sM (3.5) BS01 rna ? N/A P39015 28457705
    379103 5mei:sM (3.5) BS02 rna ? N/A P39015 28457705
    379104 5mei:sR (3.5) BS01 rna ? GO:0001965 ... P38011 28457705
    379105 5mei:sR (3.5) BS02 OHX ? GO:0001965 ... P38011 28457705
    379106 5mei:t (3.5) BS01 rna ? GO:0002181 ... Q12690 28457705
    379107 5mei:t (3.5) BS02 rna ? GO:0002181 ... Q12690 28457705
    379108 5mei:u (3.5) BS01 rna ? GO:0000027 ... P36105 28457705
    379109 5mei:v (3.5) BS01 rna ? GO:0002181 ... P05748 28457705
    379110 5mei:v (3.5) BS02 rna ? GO:0002181 ... P05748 28457705
    379111 5mei:v (3.5) BS03 OHX ? GO:0002181 ... P05748 28457705
    379112 5mei:v (3.5) BS04 OHX ? GO:0002181 ... P05748 28457705
    379113 5mei:w (3.5) BS01 rna ? GO:0000470 ... P26784 28457705
    379114 5mei:x (3.5) BS01 rna ? GO:0000448 ... P05740 28457705
    379115 5mei:x (3.5) BS02 rna ? GO:0000448 ... P05740 28457705
    379116 5mei:x (3.5) BS03 MG ? GO:0000448 ... P05740 28457705
    379117 5mei:x (3.5) BS04 OHX ? GO:0000448 ... P05740 28457705
    379118 5mei:y (3.5) BS01 rna ? GO:0002181 ... P0CX49 28457705
    379119 5mei:z (3.5) BS01 rna ? GO:0002181 ... P0CX82 28457705
    379120 5mei:z (3.5) BS02 rna ? GO:0002181 ... P0CX82 28457705
    379121 5mei:z (3.5) BS03 OHX ? GO:0002181 ... P0CX82 28457705
    379122 5mei:z (3.5) BS04 MG ? GO:0002181 ... P0CX82 28457705
    379123 5mej:A (1.5) BS01 CU 1.10.3.2 GO:0005507 ... I1VE66 28471364
    379124 5mej:A (1.5) BS02 CU 1.10.3.2 GO:0005507 ... I1VE66 28471364
    379125 5mej:A (1.5) BS03 CU 1.10.3.2 GO:0005507 ... I1VE66 28471364
    379126 5mej:A (1.5) BS04 CU 1.10.3.2 GO:0005507 ... I1VE66 28471364
    379127 5mej:A (1.5) BS05 OXY 1.10.3.2 GO:0005507 ... I1VE66 28471364
    379128 5mej:A (1.5) BS06 OXY 1.10.3.2 GO:0005507 ... I1VE66 28471364
    379129 5mek:A (1.74) BS01 A3P 2.8.2.38 GO:0005737 ... Q9C9C9 28646214
    379130 5mek:A (1.74) BS02 POL 2.8.2.38 GO:0005737 ... Q9C9C9 28646214
    379131 5mek:A (1.74) BS03 POL 2.8.2.38 GO:0005737 ... Q9C9C9 28646214
    379132 5mek:A (1.74) BS04 POL 2.8.2.38 GO:0005737 ... Q9C9C9 28646214
    379133 5mek:A (1.74) BS05 POL 2.8.2.38 GO:0005737 ... Q9C9C9 28646214
    379134 5mel:A (1.2) BS01 GLC ? GO:0004559 ... D6D1V7 27992199
    379135 5mel:A (1.2) BS02 7LQ ? GO:0004559 ... D6D1V7 27992199
    379136 5mem:A (1.78) BS01 PLP 2.4.1.1 GO:0000166 ... P00489 28493496
    379137 5mem:A (1.78) BS02 7LS 2.4.1.1 GO:0000166 ... P00489 28493496 MOAD: Ki=71nM
    379138 5men:A (2.81) BS01 peptide ? N/A P04439 27903649
    379139 5men:D (2.81) BS01 peptide ? GO:0002250 ... A0A0B4J277
    K7N5M3
    27903649
    379140 5men:E (2.81) BS01 peptide ? N/A A0A0K0K1A5
    K7N5M4
    27903649
    379141 5meo:A (1.772) BS01 peptide ? N/A P04439 27903649
    379142 5mep:A (2.71) BS01 peptide ? N/A P04439 27903649
    379143 5mep:D (2.71) BS01 peptide ? N/A P04439 27903649
    379144 5meq:A (2.27) BS01 peptide ? N/A P04439 27903649
    379145 5mer:A (1.88) BS01 peptide ? N/A P04439 27903649
    379146 5mer:A (1.88) BS02 CA ? N/A P04439 27903649
    379147 5mer:D (1.88) BS01 peptide ? N/A P04439 27903649
    379148 5mer:D (1.88) BS02 CA ? N/A P04439 27903649
    379149 5mes:A (2.24) BS01 7LT ? GO:0042981 ... P97287
    Q07820
    28197319 MOAD: Kd=0.34uM
    379150 5mev:A (2.94) BS01 7LW ? GO:0042981 ... P97287
    Q07820
    28197319
    379151 5mew:A (1.35) BS01 CU 1.10.3.2 GO:0005507 ... I1VE66 28471364
    379152 5mew:A (1.35) BS02 CU 1.10.3.2 GO:0005507 ... I1VE66 28471364
    379153 5mew:A (1.35) BS03 CU 1.10.3.2 GO:0005507 ... I1VE66 28471364
    379154 5mew:A (1.35) BS04 CU 1.10.3.2 GO:0005507 ... I1VE66 28471364
    379155 5mew:A (1.35) BS05 OXY 1.10.3.2 GO:0005507 ... I1VE66 28471364
    379156 5mew:A (1.35) BS06 OXY 1.10.3.2 GO:0005507 ... I1VE66 28471364
    379157 5mex:A (1.92) BS01 PAP 2.8.2.38 GO:0005737 ... Q9C9C9 28646214
    379158 5mex:A (1.92) BS02 SZZ 2.8.2.38 GO:0005737 ... Q9C9C9 28646214
    379159 5mex:A (1.92) BS03 BU2 2.8.2.38 GO:0005737 ... Q9C9C9 28646214
    379160 5mey:A (2.05) BS01 dna ? GO:0005667 ... Q13485 29234012
    379161 5mey:A (2.05) BS02 ZN ? GO:0005667 ... Q13485 29234012
    379162 5mez:A (2.98) BS01 dna ? GO:0005667 ... Q13485 29234012
    379163 5mez:A (2.98) BS02 ZN ? GO:0005667 ... Q13485 29234012
    379164 5mez:B (2.98) BS01 ZN ? GO:0005667 ... Q13485 29234012
    379165 5mf0:A (3.03) BS01 dna ? GO:0005667 ... Q13485 29234012
    379166 5mf0:A (3.03) BS02 ZN ? GO:0005667 ... Q13485 29234012
    379167 5mf0:B (3.03) BS01 ZN ? GO:0005667 ... Q13485 29234012
    379168 5mf2:A (2.0) BS01 7MT ? GO:0098015 ... Q6QGE8 29619195
    379169 5mf2:C (2.0) BS01 7MT ? GO:0098015 ... Q6QGE8 29619195
    379170 5mf2:D (2.0) BS01 7MT ? GO:0098015 ... Q6QGE8 29619195
    379171 5mf4:A (2.3) BS01 GTP 3.6.5.- GO:0000226 ... P81947 30023505
    379172 5mf4:A (2.3) BS02 CA 3.6.5.- GO:0000226 ... P81947 30023505
    379173 5mf4:B (2.3) BS01 GDP ? GO:0000226 ... Q6B856 30023505
    379174 5mf4:B (2.3) BS02 7LZ ? GO:0000226 ... Q6B856 30023505
    379175 5mf4:C (2.3) BS01 GTP 3.6.5.- GO:0000226 ... P81947 30023505
    379176 5mf4:C (2.3) BS02 CA 3.6.5.- GO:0000226 ... P81947 30023505
    379177 5mf4:D (2.3) BS01 GDP ? GO:0000226 ... Q6B856 30023505
    379178 5mf4:D (2.3) BS02 7LZ ? GO:0000226 ... Q6B856 30023505
    379179 5mf4:F (2.3) BS01 CA N/A GO:0036211 ... N/A 30023505
    379180 5mf4:F (2.3) BS02 ACP N/A GO:0036211 ... N/A 30023505
    379181 5mf5:A (1.77) BS01 C2E 3.1.4.52 GO:0071111 ... Q9HXH7 28186120
    379182 5mf5:A (1.77) BS02 MG 3.1.4.52 GO:0071111 ... Q9HXH7 28186120
    379183 5mf5:A (1.77) BS03 MG 3.1.4.52 GO:0071111 ... Q9HXH7 28186120
    379184 5mf5:A (1.77) BS04 MG 3.1.4.52 GO:0071111 ... Q9HXH7 28186120
    379185 5mf6:A (1.87) BS01 AR6 2.3.1.-
    2.3.1.286
    2.4.2.-
    GO:0070403 ... Q8N6T7 27990725
    379186 5mf6:A (1.87) BS02 ZN 2.3.1.-
    2.3.1.286
    2.4.2.-
    GO:0070403 ... Q8N6T7 27990725
    379187 5mf6:A (1.87) BS03 7M2 2.3.1.-
    2.3.1.286
    2.4.2.-
    GO:0070403 ... Q8N6T7 27990725 MOAD: Kd=38uM
    BindingDB: EC50=38000nM
    379188 5mf6:B (1.87) BS01 AR6 2.3.1.-
    2.3.1.286
    2.4.2.-
    GO:0070403 ... Q8N6T7 27990725
    379189 5mf6:B (1.87) BS02 ZN 2.3.1.-
    2.3.1.286
    2.4.2.-
    GO:0070403 ... Q8N6T7 27990725
    379190 5mf6:B (1.87) BS03 7M2 2.3.1.-
    2.3.1.286
    2.4.2.-
    GO:0070403 ... Q8N6T7 27990725 MOAD: Kd=38uM
    BindingDB: EC50=38000nM
    379191 5mf7:A (1.59) BS01 ZN ? GO:0000976 ... P04637 30057026
    379192 5mf7:B (1.59) BS01 ZN ? GO:0000976 ... P04637 30057026
    379193 5mf9:A (-1.00) BS01 peptide ? N/A P52756 27894420
    379194 5mfa:A (1.2) BS01 MAN 1.11.2.2 GO:0001878 ... P05164 28348079
    379195 5mfa:A (1.2) BS02 HEM 1.11.2.2 GO:0001878 ... P05164 28348079
    379196 5mfa:A (1.2) BS03 CA 1.11.2.2 GO:0001878 ... P05164 28348079
    379197 5mfd:A (2.3) BS01 CA N/A N/A N/A 28691351
    379198 5mfd:A (2.3) BS02 CA N/A N/A N/A 28691351
    379199 5mfd:A (2.3) BS03 CA N/A N/A N/A 28691351
    379200 5mfd:A (2.3) BS04 CA N/A N/A N/A 28691351

    Reference:
  • Chengxin Zhang, Xi Zhang, Lydia Freddolino, and Yang Zhang. BioLiP2: an updated structure database for biologically relevent ligand-protein interactions, Nucleic Acids Research, gkad630 (2023).
  • Jianyi Yang, Ambrish Roy, and Yang Zhang. BioLiP: a semi-manually curated database for biologically relevant ligand-protein interactions, Nucleic Acids Research, 41: D1096-D1103 (2013) (download the PDF file).