SEQ2FUN

BioLiP
Download all results in tab-seperated text for 942758 receptor-ligand interactions, whose format is explained at readme.txt.
  • Hover over PDB to view the title of the structure. Click PDB to view the structure at the RCSB PDB database. Resolution -1.00 means the resolution is unavailable, e.g., for NMR structures.
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  • Hover over EC number to view the full name of enzymatic activity.
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    # PDB
    (Resolution Å)
    Site # Ligand EC number GO terms UniProt PubMed Binding
    affinity
    379601 5mh5:A (1.4) BS04 NAP 1.1.1.- GO:0016491 ... Q2VEQ7 N/A
    379602 5mh5:B (1.4) BS01 MG 1.1.1.- GO:0016491 ... Q2VEQ7 N/A
    379603 5mh5:B (1.4) BS02 MG 1.1.1.- GO:0016491 ... Q2VEQ7 N/A
    379604 5mh5:B (1.4) BS03 7N5 1.1.1.- GO:0016491 ... Q2VEQ7 N/A
    379605 5mh5:B (1.4) BS04 NAP 1.1.1.- GO:0016491 ... Q2VEQ7 N/A
    379606 5mh6:A (1.35) BS01 MG 1.1.1.- GO:0016491 ... Q2VEQ7 N/A
    379607 5mh6:A (1.35) BS02 MG 1.1.1.- GO:0016491 ... Q2VEQ7 N/A
    379608 5mh6:A (1.35) BS03 MG 1.1.1.- GO:0016491 ... Q2VEQ7 N/A
    379609 5mh6:A (1.35) BS04 NAD 1.1.1.- GO:0016491 ... Q2VEQ7 N/A
    379610 5mh6:A (1.35) BS05 7N5 1.1.1.- GO:0016491 ... Q2VEQ7 N/A
    379611 5mh6:B (1.35) BS01 MG 1.1.1.- GO:0016491 ... Q2VEQ7 N/A
    379612 5mh6:B (1.35) BS02 MG 1.1.1.- GO:0016491 ... Q2VEQ7 N/A
    379613 5mh6:B (1.35) BS03 NAD 1.1.1.- GO:0016491 ... Q2VEQ7 N/A
    379614 5mh6:B (1.35) BS04 7N5 1.1.1.- GO:0016491 ... Q2VEQ7 N/A
    379615 5mh6:C (1.35) BS01 MG 1.1.1.- GO:0016491 ... Q2VEQ7 N/A
    379616 5mh6:C (1.35) BS02 MG 1.1.1.- GO:0016491 ... Q2VEQ7 N/A
    379617 5mh6:C (1.35) BS03 NAD 1.1.1.- GO:0016491 ... Q2VEQ7 N/A
    379618 5mh6:C (1.35) BS04 7N5 1.1.1.- GO:0016491 ... Q2VEQ7 N/A
    379619 5mh6:D (1.35) BS01 MG 1.1.1.- GO:0016491 ... Q2VEQ7 N/A
    379620 5mh6:D (1.35) BS02 MG 1.1.1.- GO:0016491 ... Q2VEQ7 N/A
    379621 5mh6:D (1.35) BS03 NAD 1.1.1.- GO:0016491 ... Q2VEQ7 N/A
    379622 5mh6:D (1.35) BS04 7N5 1.1.1.- GO:0016491 ... Q2VEQ7 N/A
    379623 5mha:A (1.57) BS01 MG 1.1.1.- GO:0016491 ... Q2VEQ7 N/A
    379624 5mha:A (1.57) BS02 7N5 1.1.1.- GO:0016491 ... Q2VEQ7 N/A
    379625 5mha:A (1.57) BS03 NDP 1.1.1.- GO:0016491 ... Q2VEQ7 N/A
    379626 5mha:B (1.57) BS01 MG 1.1.1.- GO:0016491 ... Q2VEQ7 N/A
    379627 5mha:B (1.57) BS02 7N5 1.1.1.- GO:0016491 ... Q2VEQ7 N/A
    379628 5mha:B (1.57) BS03 7N6 1.1.1.- GO:0016491 ... Q2VEQ7 N/A
    379629 5mha:B (1.57) BS04 NDP 1.1.1.- GO:0016491 ... Q2VEQ7 N/A
    379630 5mhb:A (2.1) BS01 PBG 4.2.1.24 GO:0000287 ... P0ACB2 28045381
    379631 5mhb:A (2.1) BS02 ZN 4.2.1.24 GO:0000287 ... P0ACB2 28045381
    379632 5mhb:A (2.1) BS03 ZN 4.2.1.24 GO:0000287 ... P0ACB2 28045381
    379633 5mhc:A (1.2) BS01 peptide ? GO:0000122 ... P31947 28640363
    379634 5mhd:B (-1.00) BS01 peptide ? GO:0005179 ... P01308 28024260
    379635 5mhe:H (1.9) BS01 T44 N/A N/A N/A N/A
    379636 5mhe:L (1.9) BS01 T44 N/A N/A N/A N/A
    379637 5mhf:A (2.1) BS01 6A9 3.2.1.106 GO:0004573 ... Q80UM7 32227946
    379638 5mhf:B (2.1) BS01 6A9 3.2.1.106 GO:0004573 ... Q80UM7 32227946
    379639 5mhf:C (2.1) BS01 6A9 3.2.1.106 GO:0004573 ... Q80UM7 32227946
    379640 5mhf:D (2.1) BS01 6A9 3.2.1.106 GO:0004573 ... Q80UM7 32227946
    379641 5mhg:H (2.801) BS01 4IB N/A N/A N/A N/A
    379642 5mhi:A (1.489) BS01 peptide 2.7.11.11 GO:0000287 ... P25321 N/A
    379643 5mhi:A (1.489) BS02 7N9 2.7.11.11 GO:0000287 ... P25321 N/A
    379644 5mhi:A (1.489) BS03 7N9 2.7.11.11 GO:0000287 ... P25321 N/A
    379645 5mhj:A (2.117) BS01 dna ? GO:0045893 ... P08392 28505309
    379646 5mhj:A (2.117) BS02 dna ? GO:0045893 ... P08392 28505309
    379647 5mhj:B (2.117) BS01 dna ? GO:0045893 ... P08392 28505309
    379648 5mhj:B (2.117) BS02 dna ? GO:0045893 ... P08392 28505309
    379649 5mhk:A (2.28) BS01 dna ? GO:0045893 ... P08392 28505309
    379650 5mhk:A (2.28) BS02 dna ? GO:0045893 ... P08392 28505309
    379651 5mhk:A (2.28) BS03 dna ? GO:0045893 ... P08392 28505309
    379652 5mhk:A (2.28) BS04 dna ? GO:0045893 ... P08392 28505309
    379653 5mhk:B (2.28) BS01 dna ? GO:0045893 ... P08392 28505309
    379654 5mhk:B (2.28) BS02 dna ? GO:0045893 ... P08392 28505309
    379655 5mhk:B (2.28) BS03 dna ? GO:0045893 ... P08392 28505309
    379656 5mhk:C (2.28) BS01 dna ? GO:0045893 ... P08392 28505309
    379657 5mhk:C (2.28) BS02 dna ? GO:0045893 ... P08392 28505309
    379658 5mhk:D (2.28) BS01 dna ? GO:0045893 ... P08392 28505309
    379659 5mhk:D (2.28) BS02 dna ? GO:0045893 ... P08392 28505309
    379660 5mhl:A (2.4) BS01 peptide 2.3.2.13 GO:0003810 ... P00488 N/A
    379661 5mhl:A (2.4) BS02 CA 2.3.2.13 GO:0003810 ... P00488 N/A
    379662 5mhl:A (2.4) BS03 CA 2.3.2.13 GO:0003810 ... P00488 N/A
    379663 5mhl:A (2.4) BS04 CA 2.3.2.13 GO:0003810 ... P00488 N/A
    379664 5mhl:B (2.4) BS01 peptide 2.3.2.13 GO:0003810 ... P00488 N/A
    379665 5mhl:B (2.4) BS02 CA 2.3.2.13 GO:0003810 ... P00488 N/A
    379666 5mhl:B (2.4) BS03 CA 2.3.2.13 GO:0003810 ... P00488 N/A
    379667 5mhl:B (2.4) BS04 CA 2.3.2.13 GO:0003810 ... P00488 N/A
    379668 5mhm:A (2.12) BS01 peptide 2.3.2.13 GO:0003810 ... P00488 N/A
    379669 5mhm:A (2.12) BS02 CA 2.3.2.13 GO:0003810 ... P00488 N/A
    379670 5mhm:A (2.12) BS03 CA 2.3.2.13 GO:0003810 ... P00488 N/A
    379671 5mhm:A (2.12) BS04 CA 2.3.2.13 GO:0003810 ... P00488 N/A
    379672 5mhm:B (2.12) BS01 peptide 2.3.2.13 GO:0003810 ... P00488 N/A
    379673 5mhm:B (2.12) BS02 CA 2.3.2.13 GO:0003810 ... P00488 N/A
    379674 5mhm:B (2.12) BS03 CA 2.3.2.13 GO:0003810 ... P00488 N/A
    379675 5mhm:B (2.12) BS04 CA 2.3.2.13 GO:0003810 ... P00488 N/A
    379676 5mhn:A (2.48) BS01 peptide 2.3.2.13 GO:0003810 ... P00488 N/A
    379677 5mhn:A (2.48) BS02 CA 2.3.2.13 GO:0003810 ... P00488 N/A
    379678 5mhn:A (2.48) BS03 CA 2.3.2.13 GO:0003810 ... P00488 N/A
    379679 5mhn:A (2.48) BS04 CA 2.3.2.13 GO:0003810 ... P00488 N/A
    379680 5mhn:B (2.48) BS01 peptide 2.3.2.13 GO:0003810 ... P00488 N/A
    379681 5mhn:B (2.48) BS02 CA 2.3.2.13 GO:0003810 ... P00488 N/A
    379682 5mhn:B (2.48) BS03 CA 2.3.2.13 GO:0003810 ... P00488 N/A
    379683 5mhn:B (2.48) BS04 CA 2.3.2.13 GO:0003810 ... P00488 N/A
    379684 5mho:A (2.92) BS01 peptide 2.3.2.13 GO:0003810 ... P00488 N/A
    379685 5mho:A (2.92) BS02 CA 2.3.2.13 GO:0003810 ... P00488 N/A
    379686 5mho:A (2.92) BS03 CA 2.3.2.13 GO:0003810 ... P00488 N/A
    379687 5mho:A (2.92) BS04 CA 2.3.2.13 GO:0003810 ... P00488 N/A
    379688 5mho:B (2.92) BS01 peptide 2.3.2.13 GO:0003810 ... P00488 N/A
    379689 5mho:B (2.92) BS02 CA 2.3.2.13 GO:0003810 ... P00488 N/A
    379690 5mho:B (2.92) BS03 CA 2.3.2.13 GO:0003810 ... P00488 N/A
    379691 5mho:B (2.92) BS04 CA 2.3.2.13 GO:0003810 ... P00488 N/A
    379692 5mhp:A (2.43) BS01 MAN 3.1.4.39 GO:0003676 ... Q13822 28414242
    379693 5mhp:A (2.43) BS02 MAN 3.1.4.39 GO:0003676 ... Q13822 28414242
    379694 5mhp:A (2.43) BS03 ZN 3.1.4.39 GO:0003676 ... Q13822 28414242
    379695 5mhp:A (2.43) BS04 ZN 3.1.4.39 GO:0003676 ... Q13822 28414242
    379696 5mhp:A (2.43) BS05 CA 3.1.4.39 GO:0003676 ... Q13822 28414242
    379697 5mhp:A (2.43) BS06 MG 3.1.4.39 GO:0003676 ... Q13822 28414242
    379698 5mhp:A (2.43) BS07 7NB 3.1.4.39 GO:0003676 ... Q13822 28414242 MOAD: Ki=15nM
    BindingDB: IC50=300nM, Ki=15nM
    379699 5mhq:A (1.3) BS01 8QT 2.7.11.22 GO:0000082 ... P24941 29063678 BindingDB: IC50=30nM
    379700 5mht:A (2.7) BS01 dna 2.1.1.37 GO:0003677 ... P05102 8918941
    379701 5mht:A (2.7) BS02 dna 2.1.1.37 GO:0003677 ... P05102 8918941
    379702 5mht:A (2.7) BS03 SAH 2.1.1.37 GO:0003677 ... P05102 8918941
    379703 5mhu:A (1.35) BS01 CU 1.10.3.2 GO:0005507 ... I1VE66 28471364
    379704 5mhu:A (1.35) BS02 CU 1.10.3.2 GO:0005507 ... I1VE66 28471364
    379705 5mhu:A (1.35) BS03 CU 1.10.3.2 GO:0005507 ... I1VE66 28471364
    379706 5mhu:A (1.35) BS04 CU 1.10.3.2 GO:0005507 ... I1VE66 28471364
    379707 5mhu:A (1.35) BS05 OXY 1.10.3.2 GO:0005507 ... I1VE66 28471364
    379708 5mhu:A (1.35) BS06 OXY 1.10.3.2 GO:0005507 ... I1VE66 28471364
    379709 5mhv:A (1.35) BS01 CU 1.10.3.2 GO:0005507 ... I1VE66 28471364
    379710 5mhv:A (1.35) BS02 CU 1.10.3.2 GO:0005507 ... I1VE66 28471364
    379711 5mhv:A (1.35) BS03 CU 1.10.3.2 GO:0005507 ... I1VE66 28471364
    379712 5mhv:A (1.35) BS04 CU 1.10.3.2 GO:0005507 ... I1VE66 28471364
    379713 5mhv:A (1.35) BS05 OXY 1.10.3.2 GO:0005507 ... I1VE66 28471364
    379714 5mhv:A (1.35) BS06 OXY 1.10.3.2 GO:0005507 ... I1VE66 28471364
    379715 5mhw:A (1.35) BS01 CU 1.10.3.2 GO:0005507 ... I1VE66 28471364
    379716 5mhw:A (1.35) BS02 CU 1.10.3.2 GO:0005507 ... I1VE66 28471364
    379717 5mhw:A (1.35) BS03 CU 1.10.3.2 GO:0005507 ... I1VE66 28471364
    379718 5mhw:A (1.35) BS04 CU 1.10.3.2 GO:0005507 ... I1VE66 28471364
    379719 5mhw:A (1.35) BS05 OXY 1.10.3.2 GO:0005507 ... I1VE66 28471364
    379720 5mhw:A (1.35) BS06 OXY 1.10.3.2 GO:0005507 ... I1VE66 28471364
    379721 5mhx:A (1.35) BS01 CU 1.10.3.2 GO:0005507 ... I1VE66 28471364
    379722 5mhx:A (1.35) BS02 CU 1.10.3.2 GO:0005507 ... I1VE66 28471364
    379723 5mhx:A (1.35) BS03 CU 1.10.3.2 GO:0005507 ... I1VE66 28471364
    379724 5mhx:A (1.35) BS04 CU 1.10.3.2 GO:0005507 ... I1VE66 28471364
    379725 5mhx:A (1.35) BS05 OXY 1.10.3.2 GO:0005507 ... I1VE66 28471364
    379726 5mhx:A (1.35) BS06 OXY 1.10.3.2 GO:0005507 ... I1VE66 28471364
    379727 5mhy:A (1.35) BS01 CU 1.10.3.2 GO:0005507 ... I1VE66 28471364
    379728 5mhy:A (1.35) BS02 CU 1.10.3.2 GO:0005507 ... I1VE66 28471364
    379729 5mhy:A (1.35) BS03 CU 1.10.3.2 GO:0005507 ... I1VE66 28471364
    379730 5mhy:A (1.35) BS04 CU 1.10.3.2 GO:0005507 ... I1VE66 28471364
    379731 5mhy:A (1.35) BS05 OXY 1.10.3.2 GO:0005507 ... I1VE66 28471364
    379732 5mhy:A (1.35) BS06 OXY 1.10.3.2 GO:0005507 ... I1VE66 28471364
    379733 5mhz:A (1.35) BS01 CU 1.10.3.2 GO:0005507 ... I1VE66 28471364
    379734 5mhz:A (1.35) BS02 CU 1.10.3.2 GO:0005507 ... I1VE66 28471364
    379735 5mhz:A (1.35) BS03 CU 1.10.3.2 GO:0005507 ... I1VE66 28471364
    379736 5mhz:A (1.35) BS04 CU 1.10.3.2 GO:0005507 ... I1VE66 28471364
    379737 5mhz:A (1.35) BS05 OXY 1.10.3.2 GO:0005507 ... I1VE66 28471364
    379738 5mhz:A (1.35) BS06 OXY 1.10.3.2 GO:0005507 ... I1VE66 28471364
    379739 5mi1:A (1.35) BS01 CU 1.10.3.2 GO:0005507 ... I1VE66 28471364
    379740 5mi1:A (1.35) BS02 CU 1.10.3.2 GO:0005507 ... I1VE66 28471364
    379741 5mi1:A (1.35) BS03 CU 1.10.3.2 GO:0005507 ... I1VE66 28471364
    379742 5mi1:A (1.35) BS04 CU 1.10.3.2 GO:0005507 ... I1VE66 28471364
    379743 5mi1:A (1.35) BS05 OXY 1.10.3.2 GO:0005507 ... I1VE66 28471364
    379744 5mi1:A (1.35) BS06 OXY 1.10.3.2 GO:0005507 ... I1VE66 28471364
    379745 5mi2:A (1.35) BS01 CU 1.10.3.2 GO:0005507 ... I1VE66 28471364
    379746 5mi2:A (1.35) BS02 CU 1.10.3.2 GO:0005507 ... I1VE66 28471364
    379747 5mi2:A (1.35) BS03 CU 1.10.3.2 GO:0005507 ... I1VE66 28471364
    379748 5mi2:A (1.35) BS04 CU 1.10.3.2 GO:0005507 ... I1VE66 28471364
    379749 5mi2:A (1.35) BS05 OXY 1.10.3.2 GO:0005507 ... I1VE66 28471364
    379750 5mi2:A (1.35) BS06 OXY 1.10.3.2 GO:0005507 ... I1VE66 28471364
    379751 5mi3:A (2.8) BS01 GDP ? GO:0000287 ... P0CE47 29546243
    379752 5mi3:B (2.8) BS01 GDP ? GO:0000287 ... P0CE47 29546243
    379753 5mi4:A (1.8) BS01 7NQ 3.2.1.169 GO:0005975 ... Q89ZI2 29163914
    379754 5mi4:A (1.8) BS02 CA 3.2.1.169 GO:0005975 ... Q89ZI2 29163914
    379755 5mi5:A (2.15) BS01 OAN 3.2.1.169 GO:0005975 ... Q89ZI2 29163914
    379756 5mi5:A (2.15) BS02 7NQ 3.2.1.169 GO:0005975 ... Q89ZI2 29163914
    379757 5mi5:A (2.15) BS03 CA 3.2.1.169 GO:0005975 ... Q89ZI2 29163914
    379758 5mi6:A (2.0) BS01 NHT 3.2.1.169 GO:0005975 ... Q89ZI2 29163914
    379759 5mi6:A (2.0) BS02 7NQ 3.2.1.169 GO:0005975 ... Q89ZI2 29163914
    379760 5mi6:A (2.0) BS03 CA 3.2.1.169 GO:0005975 ... Q89ZI2 29163914
    379761 5mi7:A (2.1) BS01 OAN 3.2.1.169 GO:0005975 ... Q89ZI2 29163914
    379762 5mi7:A (2.1) BS02 7NT 3.2.1.169 GO:0005975 ... Q89ZI2 29163914
    379763 5mi7:A (2.1) BS03 CA 3.2.1.169 GO:0005975 ... Q89ZI2 29163914
    379764 5mi8:A (2.18) BS01 GDP ? GO:0000287 ... P0CE47 29546243
    379765 5mi8:B (2.18) BS01 GDP ? GO:0000287 ... P0CE47 29546243
    379766 5mi9:A (3.3) BS01 GDP ? GO:0000287 ... P0CE47 29546243
    379767 5mi9:B (3.3) BS01 GDP ? GO:0000287 ... P0CE47 29546243
    379768 5mia:A (1.35) BS01 CU 1.10.3.2 GO:0005507 ... I1VE66 28471364
    379769 5mia:A (1.35) BS02 CU 1.10.3.2 GO:0005507 ... I1VE66 28471364
    379770 5mia:A (1.35) BS03 CU 1.10.3.2 GO:0005507 ... I1VE66 28471364
    379771 5mia:A (1.35) BS04 CU 1.10.3.2 GO:0005507 ... I1VE66 28471364
    379772 5mia:A (1.35) BS05 OXY 1.10.3.2 GO:0005507 ... I1VE66 28471364
    379773 5mia:A (1.35) BS06 OXY 1.10.3.2 GO:0005507 ... I1VE66 28471364
    379774 5mib:A (1.35) BS01 CU 1.10.3.2 GO:0005507 ... I1VE66 28471364
    379775 5mib:A (1.35) BS02 CU 1.10.3.2 GO:0005507 ... I1VE66 28471364
    379776 5mib:A (1.35) BS03 CU 1.10.3.2 GO:0005507 ... I1VE66 28471364
    379777 5mib:A (1.35) BS04 CU 1.10.3.2 GO:0005507 ... I1VE66 28471364
    379778 5mib:A (1.35) BS05 OXY 1.10.3.2 GO:0005507 ... I1VE66 28471364
    379779 5mib:A (1.35) BS06 OXY 1.10.3.2 GO:0005507 ... I1VE66 28471364
    379780 5mic:A (1.35) BS01 CU 1.10.3.2 GO:0005507 ... I1VE66 28471364
    379781 5mic:A (1.35) BS02 CU 1.10.3.2 GO:0005507 ... I1VE66 28471364
    379782 5mic:A (1.35) BS03 CU 1.10.3.2 GO:0005507 ... I1VE66 28471364
    379783 5mic:A (1.35) BS04 CU 1.10.3.2 GO:0005507 ... I1VE66 28471364
    379784 5mic:A (1.35) BS05 OXY 1.10.3.2 GO:0005507 ... I1VE66 28471364
    379785 5mic:A (1.35) BS06 OXY 1.10.3.2 GO:0005507 ... I1VE66 28471364
    379786 5mid:A (1.35) BS01 CU 1.10.3.2 GO:0005507 ... I1VE66 28471364
    379787 5mid:A (1.35) BS02 CU 1.10.3.2 GO:0005507 ... I1VE66 28471364
    379788 5mid:A (1.35) BS03 CU 1.10.3.2 GO:0005507 ... I1VE66 28471364
    379789 5mid:A (1.35) BS04 CU 1.10.3.2 GO:0005507 ... I1VE66 28471364
    379790 5mid:A (1.35) BS05 OXY 1.10.3.2 GO:0005507 ... I1VE66 28471364
    379791 5mid:A (1.35) BS06 OXY 1.10.3.2 GO:0005507 ... I1VE66 28471364
    379792 5mie:A (1.35) BS01 CU 1.10.3.2 GO:0005507 ... I1VE66 28471364
    379793 5mie:A (1.35) BS02 CU 1.10.3.2 GO:0005507 ... I1VE66 28471364
    379794 5mie:A (1.35) BS03 CU 1.10.3.2 GO:0005507 ... I1VE66 28471364
    379795 5mie:A (1.35) BS04 CU 1.10.3.2 GO:0005507 ... I1VE66 28471364
    379796 5mie:A (1.35) BS05 OXY 1.10.3.2 GO:0005507 ... I1VE66 28471364
    379797 5mif:C (2.141) BS01 TRT ? GO:0016787 ... D5GA36 28794466
    379798 5mif:D (2.141) BS01 TRT ? GO:0016787 ... D5GA36 28794466
    379799 5mig:A (1.35) BS01 CU 1.10.3.2 GO:0005507 ... I1VE66 28471364
    379800 5mig:A (1.35) BS02 CU 1.10.3.2 GO:0005507 ... I1VE66 28471364

    Reference:
  • Chengxin Zhang, Xi Zhang, Lydia Freddolino, and Yang Zhang. BioLiP2: an updated structure database for biologically relevent ligand-protein interactions, Nucleic Acids Research, gkad630 (2023).
  • Jianyi Yang, Ambrish Roy, and Yang Zhang. BioLiP: a semi-manually curated database for biologically relevant ligand-protein interactions, Nucleic Acids Research, 41: D1096-D1103 (2013) (download the PDF file).