SEQ2FUN

BioLiP
Download all results in tab-seperated text for 942758 receptor-ligand interactions, whose format is explained at readme.txt.
  • Hover over PDB to view the title of the structure. Click PDB to view the structure at the RCSB PDB database. Resolution -1.00 means the resolution is unavailable, e.g., for NMR structures.
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    # PDB
    (Resolution Å)
    Site # Ligand EC number GO terms UniProt PubMed Binding
    affinity
    379801 5mig:A (1.35) BS03 CU 1.10.3.2 GO:0005507 ... I1VE66 28471364
    379802 5mig:A (1.35) BS04 CU 1.10.3.2 GO:0005507 ... I1VE66 28471364
    379803 5mih:A (1.8) BS01 CA ? GO:0005737 ... Q05097 28960731
    379804 5mih:A (1.8) BS02 7NU ? GO:0005737 ... Q05097 28960731 MOAD: ic50=64uM
    379805 5mih:B (1.8) BS01 CA ? GO:0005737 ... Q05097 28960731
    379806 5mih:B (1.8) BS02 7NU ? GO:0005737 ... Q05097 28960731 MOAD: ic50=64uM
    379807 5mih:C (1.8) BS01 CA ? GO:0005737 ... Q05097 28960731
    379808 5mih:C (1.8) BS02 7NU ? GO:0005737 ... Q05097 28960731 MOAD: ic50=64uM
    379809 5mih:D (1.8) BS01 CA ? GO:0005737 ... Q05097 28960731
    379810 5mih:D (1.8) BS02 7NU ? GO:0005737 ... Q05097 28960731 MOAD: ic50=64uM
    379811 5mil:A (2.1) BS01 DUP ? GO:0046872 ... Q4ZDP4 28826473
    379812 5mil:A (2.1) BS02 MG ? GO:0046872 ... Q4ZDP4 28826473
    379813 5mil:A (2.1) BS03 MG ? GO:0046872 ... Q4ZDP4 28826473
    379814 5mil:A (2.1) BS04 DUP ? GO:0046872 ... Q4ZDP4 28826473
    379815 5mil:B (2.1) BS01 DUP ? GO:0046872 ... Q4ZDP4 28826473
    379816 5mil:B (2.1) BS02 DUP ? GO:0046872 ... Q4ZDP4 28826473
    379817 5mil:B (2.1) BS03 MG ? GO:0046872 ... Q4ZDP4 28826473
    379818 5mil:B (2.1) BS04 MG ? GO:0046872 ... Q4ZDP4 28826473
    379819 5mim:A (1.9) BS01 CA 3.4.21.75 GO:0004252 ... P09958 28402100
    379820 5mim:A (1.9) BS02 CA 3.4.21.75 GO:0004252 ... P09958 28402100
    379821 5mim:A (1.9) BS03 CA 3.4.21.75 GO:0004252 ... P09958 28402100
    379822 5mim:A (1.9) BS04 1N 3.4.21.75 GO:0004252 ... P09958 28402100 MOAD: Ki=0.046uM
    379823 5mim:A (1.9) BS05 1N 3.4.21.75 GO:0004252 ... P09958 28402100 MOAD: Ki=0.046uM
    379824 5min:A (1.76) BS01 CA 1.1.5.2 GO:0008876 ... P13650 N/A
    379825 5min:A (1.76) BS02 CA 1.1.5.2 GO:0008876 ... P13650 N/A
    379826 5min:B (1.76) BS01 CA 1.1.5.2 GO:0008876 ... P13650 N/A
    379827 5min:B (1.76) BS02 CA 1.1.5.2 GO:0008876 ... P13650 N/A
    379828 5mio:A (3.19) BS01 GTP 3.6.5.- GO:0000226 ... P81947 28694425
    379829 5mio:B (3.19) BS01 GDP ? GO:0003924 ... D0VWY9 28694425
    379830 5mio:B (3.19) BS02 LOC ? GO:0003924 ... D0VWY9 28694425
    379831 5mio:C (3.19) BS01 MG ? GO:0003777 ... Q99661 28694425
    379832 5mio:C (3.19) BS02 ANP ? GO:0003777 ... Q99661 28694425
    379833 5mip:A (2.0) BS01 FAD 1.8.1.9 GO:0000166 ... A2RLJ5 28397795
    379834 5mip:A (2.0) BS02 NAP 1.8.1.9 GO:0000166 ... A2RLJ5 28397795
    379835 5miq:A (1.92) BS01 FAD 1.8.1.9 GO:0000166 ... A2RLJ5 28397795
    379836 5miq:A (1.92) BS02 NAP 1.8.1.9 GO:0000166 ... A2RLJ5 28397795
    379837 5mir:A (2.0) BS01 FAD 1.8.1.9 GO:0000166 ... A2RLJ5 28397795
    379838 5mir:A (2.0) BS02 NAP 1.8.1.9 GO:0000166 ... A2RLJ5 28397795
    379839 5mis:A (1.81) BS01 FAD 1.8.1.9 GO:0000166 ... A2RLJ5 28397795
    379840 5mis:A (1.81) BS02 NAP 1.8.1.9 GO:0000166 ... A2RLJ5 28397795
    379841 5mit:A (1.8) BS01 FAD 1.8.1.9 GO:0000166 ... A2RLJ5 28397795
    379842 5mit:A (1.8) BS02 NAP 1.8.1.9 GO:0000166 ... A2RLJ5 28397795
    379843 5miu:A (3.5) BS01 FAD 1.6.99.- GO:0016491 ... Q9Z0X1 28666871
    379844 5miu:B (3.5) BS01 FAD 1.6.99.- GO:0016491 ... Q9Z0X1 28666871
    379845 5miv:A (3.1) BS01 NAD 1.6.99.- GO:0016491 ... Q9Z0X1 28666871
    379846 5miv:A (3.1) BS02 FAD 1.6.99.- GO:0016491 ... Q9Z0X1 28666871
    379847 5miv:C (3.1) BS01 NAD 1.6.99.- GO:0016491 ... Q9Z0X1 28666871
    379848 5miv:C (3.1) BS02 FAD 1.6.99.- GO:0016491 ... Q9Z0X1 28666871
    379849 5miw:A (1.28) BS01 URA 2.4.2.3 GO:0003824 ... Q9K4U1 N/A
    379850 5miw:B (1.28) BS01 URA 2.4.2.3 GO:0003824 ... Q9K4U1 N/A
    379851 5miw:C (1.28) BS01 URA 2.4.2.3 GO:0003824 ... Q9K4U1 N/A
    379852 5miw:D (1.28) BS01 URA 2.4.2.3 GO:0003824 ... Q9K4U1 N/A
    379853 5miw:E (1.28) BS01 URA 2.4.2.3 GO:0003824 ... Q9K4U1 N/A
    379854 5miw:F (1.28) BS01 URA 2.4.2.3 GO:0003824 ... Q9K4U1 N/A
    379855 5miz:B (-1.00) BS01 peptide ? GO:0005179 ... P01317 N/A
    379856 5mj5:A (1.9) BS01 peptide ? GO:0003677 ... P19793 28691794
    379857 5mj5:A (1.9) BS02 7O0 ? GO:0003677 ... P19793 28691794
    379858 5mj6:A (2.53) BS01 ZN 3.4.11.3 GO:0006508 ... Q9UIQ6 28328206
    379859 5mj6:A (2.53) BS02 7O2 3.4.11.3 GO:0006508 ... Q9UIQ6 28328206 BindingDB: IC50=32nM, Ki=18nM
    379860 5mj6:B (2.53) BS01 ZN 3.4.11.3 GO:0006508 ... Q9UIQ6 28328206
    379861 5mj6:B (2.53) BS02 7O2 3.4.11.3 GO:0006508 ... Q9UIQ6 28328206 BindingDB: IC50=32nM, Ki=18nM
    379862 5mj7:A (1.65) BS01 CA 3.2.2.-
    3.2.2.1
    3.2.2.2
    3.2.2.3
    3.2.2.7
    3.2.2.8
    GO:0005509 ... Q9XWN7 28218438
    379863 5mj7:B (1.65) BS01 CA 3.2.2.-
    3.2.2.1
    3.2.2.2
    3.2.2.3
    3.2.2.7
    3.2.2.8
    GO:0005509 ... Q9XWN7 28218438
    379864 5mja:A (2.14) BS01 7O3 2.7.10.1 GO:0004672 ... P54762 28459525 MOAD: ic50=220nM
    379865 5mja:B (2.14) BS01 7O3 2.7.10.1 GO:0004672 ... P54762 28459525 MOAD: ic50=220nM
    379866 5mjb:A (2.23) BS01 7O3 2.7.10.1 GO:0004672 ... P54762 28459525
    379867 5mjb:B (2.23) BS01 7O3 2.7.10.1 GO:0004672 ... P54762 28459525
    379868 5mjc:A (1.62) BS01 HEM 1.7.-.- GO:0005092 ... Q9ER97 31576217
    379869 5mjc:A (1.62) BS02 OXY 1.7.-.- GO:0005092 ... Q9ER97 31576217
    379870 5mjd:A (1.7) BS01 HEM 1.7.-.- GO:0005092 ... Q9ER97 31576217
    379871 5mjh:A (1.45) BS01 HEM N/A GO:0004601 ... N/A 28512573
    379872 5mjh:A (1.45) BS02 OXY N/A GO:0004601 ... N/A 28512573
    379873 5mjh:B (1.45) BS01 HEM N/A GO:0004601 ... N/A 28512573
    379874 5mji:A (2.0) BS01 7O6 2.6.1.114 GO:0008483 ... K4REZ6 27981706
    379875 5mjk:A (2.0) BS01 FAD 1.8.1.9 GO:0000166 ... A2RLJ5 28397795
    379876 5mjk:B (2.0) BS01 FAD 1.8.1.9 GO:0000166 ... A2RLJ5 28397795
    379877 5mjk:C (2.0) BS01 FAD 1.8.1.9 GO:0000166 ... A2RLJ5 28397795
    379878 5mjk:D (2.0) BS01 FAD 1.8.1.9 GO:0000166 ... A2RLJ5 28397795
    379879 5mjl:A (2.21014) BS01 CA 3.4.21.64 GO:0004252 ... P06873 29097720
    379880 5mjn:A (1.17) BS01 ZN 4.2.1.1
    4.2.1.69
    GO:0002009 ... P00918 28024887
    379881 5mjn:A (1.17) BS02 7O8 4.2.1.1
    4.2.1.69
    GO:0002009 ... P00918 28024887 MOAD: Ki=2.9nM
    BindingDB: Ki=2.9nM
    379882 5mjs:A (4.6) BS01 GDP ? GO:0000022 ... P05219 29235477
    379883 5mjs:B (4.6) BS01 GDP ? GO:0000022 ... P05219 29235477
    379884 5mjs:C (4.6) BS01 GDP ? GO:0000022 ... P05219 29235477
    379885 5mjs:E (4.6) BS01 GTP 3.6.5.- GO:0000226 ... P04688 29235477
    379886 5mjs:F (4.6) BS01 GTP 3.6.5.- GO:0000226 ... P04688 29235477
    379887 5mjs:G (4.6) BS01 GTP 3.6.5.- GO:0000226 ... P04688 29235477
    379888 5mjs:H (4.6) BS01 GTP 3.6.5.- GO:0000226 ... P04688 29235477
    379889 5mjs:J (4.6) BS01 GDP ? GO:0000022 ... P05219 29235477
    379890 5mjt:H (1.4) BS01 peptide 3.4.21.5 GO:0004252 ... P00734 N/A
    379891 5mjt:H (1.4) BS02 23U 3.4.21.5 GO:0004252 ... P00734 N/A BindingDB: IC50=12nM
    379892 5mju:A (3.71) BS01 6Z6 ? GO:0015293 ... P43003
    Q15758
    28424515
    379893 5mju:A (3.71) BS02 7O9 ? GO:0015293 ... P43003
    Q15758
    28424515
    379894 5mjv:A (3.09) BS01 rna 2.7.7.48
    3.4.22.28
    3.6.1.15
    N/A Q66578 28232749
    379895 5mjv:B (3.09) BS01 rna 2.7.7.48
    3.4.22.28
    3.6.1.15
    N/A Q66578 28232749
    379896 5mjy:A (2.25) BS01 peptide 3.1.3.48 N/A Q9H3S7 28602823
    379897 5mjy:A (2.25) BS02 peptide 3.1.3.48 N/A Q9H3S7 28602823
    379898 5mjy:B (2.25) BS01 peptide 3.1.3.48 N/A Q9H3S7 28602823
    379899 5mjy:C (2.25) BS01 peptide 3.1.3.48 N/A Q9H3S7 28602823
    379900 5mk0:A (1.765) BS01 peptide 3.1.3.48 N/A Q9H3S7 28602823
    379901 5mk0:C (1.765) BS01 peptide 3.1.3.48 N/A Q9H3S7 28602823
    379902 5mk0:C (1.765) BS02 peptide 3.1.3.48 N/A Q9H3S7 28602823
    379903 5mk1:A (2.5) BS01 peptide 3.1.3.48 N/A Q9H3S7 28602823
    379904 5mk1:B (2.5) BS01 peptide 3.1.3.48 N/A Q9H3S7 28602823
    379905 5mk1:C (2.5) BS01 peptide 3.1.3.48 N/A Q9H3S7 28602823
    379906 5mk1:D (2.5) BS01 peptide 3.1.3.48 N/A Q9H3S7 28602823
    379907 5mk2:B (1.7) BS01 peptide 3.1.3.48 N/A Q9H3S7 28602823
    379908 5mk3:A (2.0) BS01 peptide 3.1.3.48 N/A Q9H3S7 28602823
    379909 5mk3:A (2.0) BS02 peptide 3.1.3.48 N/A Q9H3S7 28602823
    379910 5mk3:B (2.0) BS01 peptide 3.1.3.48 N/A Q9H3S7 28602823
    379911 5mk3:B (2.0) BS02 peptide 3.1.3.48 N/A Q9H3S7 28602823
    379912 5mk3:C (2.0) BS01 peptide 3.1.3.48 N/A Q9H3S7 28602823
    379913 5mk3:C (2.0) BS02 peptide 3.1.3.48 N/A Q9H3S7 28602823
    379914 5mk3:D (2.0) BS01 peptide 3.1.3.48 N/A Q9H3S7 28602823
    379915 5mk3:D (2.0) BS02 peptide 3.1.3.48 N/A Q9H3S7 28602823
    379916 5mk4:A (2.0) BS01 peptide ? GO:0003677 ... P19793 28691794
    379917 5mk4:A (2.0) BS02 I5W ? GO:0003677 ... P19793 28691794
    379918 5mk4:C (2.0) BS01 peptide ? GO:0003677 ... P19793 28691794
    379919 5mk4:C (2.0) BS02 I5W ? GO:0003677 ... P19793 28691794
    379920 5mk9:A (0.919) BS01 GLC ? GO:0015768 ... B0L7B0 28370477
    379921 5mk9:A (0.919) BS02 GLC ? GO:0015768 ... B0L7B0 28370477
    379922 5mk9:A (0.919) BS03 GLC ? GO:0015768 ... B0L7B0 28370477
    379923 5mk9:A (0.919) BS04 GLC ? GO:0015768 ... B0L7B0 28370477
    379924 5mk9:A (0.919) BS05 GLC ? GO:0015768 ... B0L7B0 28370477
    379925 5mka:A (1.149) BS01 GLC ? GO:0015768 ... B0L7B0 28370477
    379926 5mka:A (1.149) BS02 GLC ? GO:0015768 ... B0L7B0 28370477
    379927 5mka:A (1.149) BS03 GLC ? GO:0015768 ... B0L7B0 28370477
    379928 5mka:A (1.149) BS04 GLC ? GO:0015768 ... B0L7B0 28370477
    379929 5mkc:C (2.04) BS01 CA ? N/A A0A0H2UNT6 28252635
    379930 5mkc:E (2.04) BS01 CA ? N/A A0A0H2UNT6 28252635
    379931 5mkc:F (2.04) BS01 CA ? N/A A0A0H2UNT6 28252635
    379932 5mke:A (4.3) BS01 CHS ? GO:0001658 ... Q13563 28092368
    379933 5mke:B (4.3) BS01 CHS ? GO:0001658 ... Q13563 28092368
    379934 5mke:C (4.3) BS01 CHS ? GO:0001658 ... Q13563 28092368
    379935 5mke:D (4.3) BS01 CHS ? GO:0001658 ... Q13563 28092368
    379936 5mkf:A (4.2) BS01 CHS ? GO:0001658 ... Q13563 28092368
    379937 5mkf:B (4.2) BS01 CHS ? GO:0001658 ... Q13563 28092368
    379938 5mkf:C (4.2) BS01 CHS ? GO:0001658 ... Q13563 28092368
    379939 5mkf:D (4.2) BS01 CHS ? GO:0001658 ... Q13563 28092368
    379940 5mkg:A (2.44) BS01 CA N/A GO:0071111 ... N/A 28186120
    379941 5mkg:A (2.44) BS02 CA N/A GO:0071111 ... N/A 28186120
    379942 5mkg:A (2.44) BS03 CA N/A GO:0071111 ... N/A 28186120
    379943 5mkg:A (2.44) BS04 C2E N/A GO:0071111 ... N/A 28186120
    379944 5mkg:B (2.44) BS01 CA N/A GO:0071111 ... N/A 28186120
    379945 5mkg:B (2.44) BS02 CA N/A GO:0071111 ... N/A 28186120
    379946 5mkg:B (2.44) BS03 CA N/A GO:0071111 ... N/A 28186120
    379947 5mkg:B (2.44) BS04 C2E N/A GO:0071111 ... N/A 28186120
    379948 5mki:C (2.048) BS01 CA ? GO:0003723 ... A6UPF5 32422160
    379949 5mki:D (2.048) BS01 CA ? GO:0003723 ... A6UPF5 32422160
    379950 5mki:E (2.048) BS01 CA ? GO:0003723 ... A6UPF5 32422160
    379951 5mki:F (2.048) BS01 CA ? GO:0003723 ... A6UPF5 32422160
    379952 5mki:G (2.048) BS01 CA ? GO:0003723 ... A6UPF5 32422160
    379953 5mki:I (2.048) BS01 CA ? GO:0003723 ... A6UPF5 32422160
    379954 5mki:J (2.048) BS01 CA ? GO:0003723 ... A6UPF5 32422160
    379955 5mki:K (2.048) BS01 CA ? GO:0003723 ... A6UPF5 32422160
    379956 5mki:L (2.048) BS01 CA ? GO:0003723 ... A6UPF5 32422160
    379957 5mkj:A (2.5) BS01 peptide ? GO:0003677 ... P19793 28691794
    379958 5mkj:A (2.5) BS02 4CU ? GO:0003677 ... P19793 28691794
    379959 5mkm:A (1.996) BS01 CU 1.10.3.2 GO:0005507 ... A0A0M4FJ81 31261802
    379960 5mkm:A (1.996) BS02 CU 1.10.3.2 GO:0005507 ... A0A0M4FJ81 31261802
    379961 5mkm:A (1.996) BS03 OXY 1.10.3.2 GO:0005507 ... A0A0M4FJ81 31261802
    379962 5mkm:A (1.996) BS04 O 1.10.3.2 GO:0005507 ... A0A0M4FJ81 31261802
    379963 5mkm:B (1.996) BS01 OXY 1.10.3.2 GO:0005507 ... A0A0M4FJ81 31261802
    379964 5mkm:B (1.996) BS02 CU 1.10.3.2 GO:0005507 ... A0A0M4FJ81 31261802
    379965 5mkm:B (1.996) BS03 CU 1.10.3.2 GO:0005507 ... A0A0M4FJ81 31261802
    379966 5mkm:C (1.996) BS01 O 1.10.3.2 GO:0005507 ... A0A0M4FJ81 31261802
    379967 5mkm:C (1.996) BS02 CU 1.10.3.2 GO:0005507 ... A0A0M4FJ81 31261802
    379968 5mkm:C (1.996) BS03 CU 1.10.3.2 GO:0005507 ... A0A0M4FJ81 31261802
    379969 5mkm:D (1.996) BS01 O 1.10.3.2 GO:0005507 ... A0A0M4FJ81 31261802
    379970 5mkm:D (1.996) BS02 CU 1.10.3.2 GO:0005507 ... A0A0M4FJ81 31261802
    379971 5mkm:D (1.996) BS03 CU 1.10.3.2 GO:0005507 ... A0A0M4FJ81 31261802
    379972 5mkm:D (1.996) BS04 OXY 1.10.3.2 GO:0005507 ... A0A0M4FJ81 31261802
    379973 5mkm:E (1.996) BS01 OXY 1.10.3.2 GO:0005507 ... A0A0M4FJ81 31261802
    379974 5mkm:E (1.996) BS02 CU 1.10.3.2 GO:0005507 ... A0A0M4FJ81 31261802
    379975 5mkm:E (1.996) BS03 CU 1.10.3.2 GO:0005507 ... A0A0M4FJ81 31261802
    379976 5mkm:F (1.996) BS01 CU 1.10.3.2 GO:0005507 ... A0A0M4FJ81 31261802
    379977 5mkm:F (1.996) BS02 CU 1.10.3.2 GO:0005507 ... A0A0M4FJ81 31261802
    379978 5mkn:A (2.55) BS01 U5P ? GO:0003723 ... A6UPF5 N/A
    379979 5mkn:B (2.55) BS01 U5P ? GO:0003723 ... A6UPF5 N/A
    379980 5mkn:C (2.55) BS01 U5P ? GO:0003723 ... A6UPF5 N/A
    379981 5mkn:D (2.55) BS01 U5P ? GO:0003723 ... A6UPF5 N/A
    379982 5mkn:E (2.55) BS01 U5P ? GO:0003723 ... A6UPF5 N/A
    379983 5mkn:F (2.55) BS01 U5P ? GO:0003723 ... A6UPF5 N/A
    379984 5mkn:F (2.55) BS02 U5P ? GO:0003723 ... A6UPF5 N/A
    379985 5mkn:G (2.55) BS01 U5P ? GO:0003723 ... A6UPF5 N/A
    379986 5mkn:G (2.55) BS02 U5P ? GO:0003723 ... A6UPF5 N/A
    379987 5mkn:H (2.55) BS01 U5P ? GO:0003723 ... A6UPF5 N/A
    379988 5mkn:I (2.55) BS01 U5P ? GO:0003723 ... A6UPF5 N/A
    379989 5mkn:J (2.55) BS01 U5P ? GO:0003723 ... A6UPF5 N/A
    379990 5mkn:K (2.55) BS01 U5P ? GO:0003723 ... A6UPF5 N/A
    379991 5mkn:L (2.55) BS01 U5P ? GO:0003723 ... A6UPF5 N/A
    379992 5mkn:M (2.55) BS01 U5P ? GO:0003723 ... A6UPF5 N/A
    379993 5mkn:M (2.55) BS02 U5P ? GO:0003723 ... A6UPF5 N/A
    379994 5mkn:N (2.55) BS01 U5P ? GO:0003723 ... A6UPF5 N/A
    379995 5mkn:O (2.55) BS01 U5P ? GO:0003723 ... A6UPF5 N/A
    379996 5mkn:P (2.55) BS01 U5P ? GO:0003723 ... A6UPF5 N/A
    379997 5mkn:Q (2.55) BS01 U5P ? GO:0003723 ... A6UPF5 N/A
    379998 5mkn:R (2.55) BS01 U5P ? GO:0003723 ... A6UPF5 N/A
    379999 5mkn:T (2.55) BS01 U5P ? GO:0003723 ... A6UPF5 N/A
    380000 5mkn:U (2.55) BS01 U5P ? GO:0003723 ... A6UPF5 N/A

    Reference:
  • Chengxin Zhang, Xi Zhang, Lydia Freddolino, and Yang Zhang. BioLiP2: an updated structure database for biologically relevent ligand-protein interactions, Nucleic Acids Research, gkad630 (2023).
  • Jianyi Yang, Ambrish Roy, and Yang Zhang. BioLiP: a semi-manually curated database for biologically relevant ligand-protein interactions, Nucleic Acids Research, 41: D1096-D1103 (2013) (download the PDF file).