SEQ2FUN

BioLiP
Download all results in tab-seperated text for 942758 receptor-ligand interactions, whose format is explained at readme.txt.
  • Hover over PDB to view the title of the structure. Click PDB to view the structure at the RCSB PDB database. Resolution -1.00 means the resolution is unavailable, e.g., for NMR structures.
  • Click Site # to view the binding site structure. Hover over Site # to view the binding residues.
  • Hover over Ligand to view the full ligand name. Click Ligand to view the 2D diagram and other detail information of the ligand.
  • Hover over EC number to view the full name of enzymatic activity.
  • Hover over GO terms to view all GO terms.
  • Hover over UniProt to view the protein name.
  • Sort results by
    << < 1901 1902 1903 1904 1905 1906 1907 1908 1909 1910 1911 1912 1913 1914 1915 1916 1917 1918 1919 1920 1921 > >>
    Go to page

    # PDB
    (Resolution Å)
    Site # Ligand EC number GO terms UniProt PubMed Binding
    affinity
    382001 5myi:D (1.9) BS02 CA 3.6.1.23 GO:0004170 ... A0A2D0TC88 28892519
    382002 5myj:A (5.6) BS01 rna ? GO:0005737 ... A2RIX0 28959045
    382003 5myj:AB (5.6) BS01 rna ? GO:0003735 ... A2RNV0 28959045
    382004 5myj:AC (5.6) BS01 rna ? GO:0003676 ... A2RNP9 28959045
    382005 5myj:AD (5.6) BS01 rna ? GO:0003723 ... A2RI10 28959045
    382006 5myj:AE (5.6) BS01 rna ? GO:0003723 ... A2RNN6 28959045
    382007 5myj:AF (5.6) BS01 rna ? GO:0003735 ... A2RNZ4 28959045
    382008 5myj:AG (5.6) BS01 rna ? GO:0000049 ... A2RP73 28959045
    382009 5myj:AH (5.6) BS01 rna ? GO:0003735 ... A2RNN9 28959045
    382010 5myj:AI (5.6) BS01 rna ? GO:0003723 ... A2RP61 28959045
    382011 5myj:AJ (5.6) BS01 rna ? GO:0000049 ... A2RNQ6 28959045
    382012 5myj:AK (5.6) BS01 rna ? GO:0003735 ... A2RNM8 28959045
    382013 5myj:AL (5.6) BS01 rna ? GO:0000049 ... A2RP74 28959045
    382014 5myj:AM (5.6) BS01 rna ? GO:0000049 ... A2RNM9 28959045
    382015 5myj:AM (5.6) BS02 rna ? GO:0000049 ... A2RNM9 28959045
    382016 5myj:AN (5.6) BS01 rna ? GO:0003735 ... A2RNP2 28959045
    382017 5myj:AO (5.6) BS01 rna ? GO:0003735 ... A2RMV9 28959045
    382018 5myj:AO (5.6) BS02 rna ? GO:0003735 ... A2RMV9 28959045
    382019 5myj:AP (5.6) BS01 rna ? GO:0003735 ... A2RJS1 28959045
    382020 5myj:AQ (5.6) BS01 rna ? GO:0003735 ... A2RNP6 28959045
    382021 5myj:AR (5.6) BS01 rna ? GO:0003735 ... A2RNZ2 28959045
    382022 5myj:AS (5.6) BS01 rna ? GO:0000028 ... A2RNQ1 28959045
    382023 5myj:AT (5.6) BS01 rna ? GO:0003723 ... A2RMG0 28959045
    382024 5myj:AU (5.6) BS01 rna ? GO:0003735 ... A2RHW9 28959045
    382025 5myj:B0 (5.6) BS01 rna ? GO:0003735 ... A2RHS3 28959045
    382026 5myj:B1 (5.6) BS01 rna ? GO:0003735 ... A2RNP7 28959045
    382027 5myj:B2 (5.6) BS01 rna ? GO:0003735 ... A2RNN5 28959045
    382028 5myj:B3 (5.6) BS01 rna ? GO:0003735 ... A2RJP7 28959045
    382029 5myj:B4 (5.6) BS01 rna ? GO:0003735 ... A2RHH0 28959045
    382030 5myj:B5 (5.6) BS01 rna ? GO:0003735 ... A2RNR2 28959045
    382031 5myj:B6 (5.6) BS01 rna ? GO:0003735 ... A2RHL6 28959045
    382032 5myj:B7 (5.6) BS01 rna ? GO:0003735 ... A2RMR2 28959045
    382033 5myj:B8 (5.6) BS01 rna ? GO:0003735 ... A2RNN0 28959045
    382034 5myj:BD (5.6) BS01 rna ? GO:0002181 ... A2RNQ2 28959045
    382035 5myj:BE (5.6) BS01 rna ? GO:0003735 ... A2RNQ5 28959045
    382036 5myj:BF (5.6) BS01 rna ? GO:0003735 ... A2RNQ4 28959045
    382037 5myj:BG (5.6) BS01 rna ? GO:0000049 ... A2RNP3 28959045
    382038 5myj:BG (5.6) BS02 rna ? GO:0000049 ... A2RNP3 28959045
    382039 5myj:BH (5.6) BS01 rna ? GO:0002181 ... A2RNN8 28959045
    382040 5myj:BM (5.6) BS01 rna ? GO:0003729 ... A2RP62 28959045
    382041 5myj:BN (5.6) BS01 rna ? GO:0003735 ... A2RNP5 28959045
    382042 5myj:BN (5.6) BS02 rna ? GO:0003735 ... A2RNP5 28959045
    382043 5myj:BO (5.6) BS01 rna ? GO:0003735 ... A2RNN4 28959045
    382044 5myj:BP (5.6) BS01 rna ? GO:0000049 ... A2RNP8 28959045
    382045 5myj:BP (5.6) BS02 rna ? GO:0000049 ... A2RNP8 28959045
    382046 5myj:BQ (5.6) BS01 rna ? GO:0003735 ... A2RNM6 28959045
    382047 5myj:BR (5.6) BS01 rna ? GO:0003735 ... A2RNN7 28959045
    382048 5myj:BR (5.6) BS02 rna ? GO:0003735 ... A2RNN7 28959045
    382049 5myj:BS (5.6) BS01 rna ? GO:0003735 ... A2RLS5 28959045
    382050 5myj:BS (5.6) BS02 rna ? GO:0003735 ... A2RLS5 28959045
    382051 5myj:BT (5.6) BS01 rna ? GO:0000027 ... A2RMR1 28959045
    382052 5myj:BU (5.6) BS01 rna ? GO:0003723 ... A2RLA4 28959045
    382053 5myj:BV (5.6) BS01 rna ? GO:0003735 ... A2RNQ0 28959045
    382054 5myj:BW (5.6) BS01 rna ? GO:0003735 ... A2RNQ3 28959045
    382055 5myj:BX (5.6) BS01 rna ? GO:0003723 ... A2RNP4 28959045
    382056 5myj:BZ (5.6) BS01 rna ? GO:0003735 ... A2RLA2 28959045
    382057 5myj:BZ (5.6) BS02 rna ? GO:0003735 ... A2RLA2 28959045
    382058 5myk:A (1.6) BS01 peptide N/A N/A N/A 28623233
    382059 5myk:B (1.6) BS01 peptide N/A N/A N/A 28623233
    382060 5myl:A (1.724) BS01 Q2N ? GO:0000976 ... P9WMC1 29018348 MOAD: ic50=9.9uM
    382061 5mym:B (2.28) BS01 HYV ? GO:0000976 ... P9WMC1 29018348 MOAD: ic50=3.9uM
    382062 5mym:C (2.28) BS01 HYV ? GO:0000976 ... P9WMC1 29018348 MOAD: ic50=3.9uM
    382063 5myn:A (1.564) BS01 ZUF ? GO:0000976 ... P9WMC1 29018348 MOAD: ic50=30uM
    382064 5myo:A (1.59) BS01 peptide N/A N/A N/A 28623233
    382065 5myo:B (1.59) BS01 peptide N/A N/A N/A 28623233
    382066 5myq:A (1.89) BS01 HBF ? GO:0005576 ... P02701 N/A
    382067 5myq:B (1.89) BS01 HBF ? GO:0005576 ... P02701 N/A
    382068 5myq:C (1.89) BS01 HBF ? GO:0005576 ... P02701 N/A
    382069 5myq:D (1.89) BS01 HBF ? GO:0005576 ... P02701 N/A
    382070 5myr:A (1.828) BS01 UDY ? GO:0000976 ... P9WMC1 29018348 MOAD: ic50=22uM
    382071 5mys:A (1.587) BS01 YP6 ? GO:0000976 ... P9WMC1 29018348 MOAD: ic50=50uM
    382072 5myt:A (1.61) BS01 ZQC ? GO:0000976 ... P9WMC1 29018348
    382073 5myv:A (2.9) BS01 W4A 2.7.11.1 GO:0004672 ... P78362 28135068
    382074 5myv:B (2.9) BS01 W4A 2.7.11.1 GO:0004672 ... P78362 28135068
    382075 5myv:C (2.9) BS01 W4A 2.7.11.1 GO:0004672 ... P78362 28135068
    382076 5myv:D (2.9) BS01 W4A 2.7.11.1 GO:0004672 ... P78362 28135068
    382077 5myw:A (1.77) BS01 WCU ? GO:0000976 ... P9WMC1 29018348
    382078 5myx:A (1.492) BS01 peptide N/A N/A N/A 28623233
    382079 5myx:B (1.492) BS01 peptide N/A N/A N/A 28623233
    382080 5myx:C (1.492) BS01 peptide N/A N/A N/A 28623233
    382081 5myx:D (1.492) BS01 peptide N/A N/A N/A 28623233
    382082 5mz2:A (1.9) BS01 MG 4.1.1.39 GO:0000287 ... A8DP67 29925588
    382083 5mz2:A (1.9) BS02 CAP 4.1.1.39 GO:0000287 ... A8DP67 29925588
    382084 5mz2:A (1.9) BS03 CAP 4.1.1.39 GO:0000287 ... A8DP67 29925588
    382085 5mz2:B (1.9) BS01 CAP 4.1.1.39 GO:0000287 ... A8DP67 29925588
    382086 5mz2:B (1.9) BS02 MG 4.1.1.39 GO:0000287 ... A8DP67 29925588
    382087 5mz2:B (1.9) BS03 CAP 4.1.1.39 GO:0000287 ... A8DP67 29925588
    382088 5mz2:C (1.9) BS01 MG 4.1.1.39 GO:0000287 ... A8DP67 29925588
    382089 5mz2:C (1.9) BS02 CAP 4.1.1.39 GO:0000287 ... A8DP67 29925588
    382090 5mz2:C (1.9) BS03 CAP 4.1.1.39 GO:0000287 ... A8DP67 29925588
    382091 5mz2:D (1.9) BS01 CAP 4.1.1.39 GO:0000287 ... A8DP67 29925588
    382092 5mz2:D (1.9) BS02 MG 4.1.1.39 GO:0000287 ... A8DP67 29925588
    382093 5mz2:D (1.9) BS03 CAP 4.1.1.39 GO:0000287 ... A8DP67 29925588
    382094 5mz2:E (1.9) BS01 CAP 4.1.1.39 GO:0000287 ... A8DP67 29925588
    382095 5mz2:E (1.9) BS02 MG 4.1.1.39 GO:0000287 ... A8DP67 29925588
    382096 5mz2:E (1.9) BS03 CAP 4.1.1.39 GO:0000287 ... A8DP67 29925588
    382097 5mz2:F (1.9) BS01 MG 4.1.1.39 GO:0000287 ... A8DP67 29925588
    382098 5mz2:F (1.9) BS02 CAP 4.1.1.39 GO:0000287 ... A8DP67 29925588
    382099 5mz2:F (1.9) BS03 CAP 4.1.1.39 GO:0000287 ... A8DP67 29925588
    382100 5mz2:G (1.9) BS01 CAP 4.1.1.39 GO:0000287 ... A8DP67 29925588
    382101 5mz2:G (1.9) BS02 MG 4.1.1.39 GO:0000287 ... A8DP67 29925588
    382102 5mz2:G (1.9) BS03 CAP 4.1.1.39 GO:0000287 ... A8DP67 29925588
    382103 5mz2:H (1.9) BS01 MG 4.1.1.39 GO:0000287 ... A8DP67 29925588
    382104 5mz2:H (1.9) BS02 CAP 4.1.1.39 GO:0000287 ... A8DP67 29925588
    382105 5mz2:H (1.9) BS03 CAP 4.1.1.39 GO:0000287 ... A8DP67 29925588
    382106 5mz3:A (2.15) BS01 8EN 2.7.11.24 GO:0000077 ... Q16539 29107542 MOAD: ic50=0.0002uM
    BindingDB: IC50=220nM
    382107 5mza:A (2.78) BS01 3PO ? GO:0016020 ... Q8IHM0 28279348
    382108 5mza:B (2.78) BS01 IHP ? GO:0005178 ... P05362 28279348
    382109 5mzc:A (1.82) BS01 FAD 1.14.13.9 GO:0003824 ... Q84HF5 28398044
    382110 5mzc:A (1.82) BS02 8EQ 1.14.13.9 GO:0003824 ... Q84HF5 28398044 MOAD: ic50=5.012nM
    382111 5mzc:A (1.82) BS03 8EQ 1.14.13.9 GO:0003824 ... Q84HF5 28398044 MOAD: ic50=5.012nM
    382112 5mzc:A (1.82) BS04 8EQ 1.14.13.9 GO:0003824 ... Q84HF5 28398044 MOAD: ic50=5.012nM
    382113 5mzc:B (1.82) BS01 8EQ 1.14.13.9 GO:0003824 ... Q84HF5 28398044 MOAD: ic50=5.012nM
    382114 5mzc:B (1.82) BS02 FAD 1.14.13.9 GO:0003824 ... Q84HF5 28398044
    382115 5mzc:B (1.82) BS03 8EQ 1.14.13.9 GO:0003824 ... Q84HF5 28398044 MOAD: ic50=5.012nM
    382116 5mzc:B (1.82) BS04 8EQ 1.14.13.9 GO:0003824 ... Q84HF5 28398044 MOAD: ic50=5.012nM
    382117 5mze:A (2.1) BS01 CU 3.6.1.-
    3.6.1.56
    GO:0001669 ... P53368 29281266
    382118 5mze:A (2.1) BS02 CU 3.6.1.-
    3.6.1.56
    GO:0001669 ... P53368 29281266
    382119 5mze:A (2.1) BS03 8DG 3.6.1.-
    3.6.1.56
    GO:0001669 ... P53368 29281266
    382120 5mze:B (2.1) BS01 CU 3.6.1.-
    3.6.1.56
    GO:0001669 ... P53368 29281266
    382121 5mze:B (2.1) BS02 8DG 3.6.1.-
    3.6.1.56
    GO:0001669 ... P53368 29281266
    382122 5mze:C (2.1) BS01 8DG 3.6.1.-
    3.6.1.56
    GO:0001669 ... P53368 29281266
    382123 5mze:D (2.1) BS01 8DG 3.6.1.-
    3.6.1.56
    GO:0001669 ... P53368 29281266
    382124 5mzg:A (1.85) BS01 2GE 3.6.1.-
    3.6.1.56
    GO:0001669 ... P53368 29281266 MOAD: ic50=138nM
    382125 5mzg:B (1.85) BS01 2GE 3.6.1.-
    3.6.1.56
    GO:0001669 ... P53368 29281266 MOAD: ic50=138nM
    382126 5mzi:A (1.71) BS01 FAD 1.14.13.9 GO:0003824 ... Q84HF5 28398044
    382127 5mzi:A (1.71) BS02 FYK 1.14.13.9 GO:0003824 ... Q84HF5 28398044 MOAD: ic50=3.162nM
    382128 5mzi:A (1.71) BS03 FYK 1.14.13.9 GO:0003824 ... Q84HF5 28398044 MOAD: ic50=3.162nM
    382129 5mzi:A (1.71) BS04 FYK 1.14.13.9 GO:0003824 ... Q84HF5 28398044 MOAD: ic50=3.162nM
    382130 5mzi:B (1.71) BS01 FAD 1.14.13.9 GO:0003824 ... Q84HF5 28398044
    382131 5mzi:B (1.71) BS02 FYK 1.14.13.9 GO:0003824 ... Q84HF5 28398044 MOAD: ic50=3.162nM
    382132 5mzi:B (1.71) BS03 FYK 1.14.13.9 GO:0003824 ... Q84HF5 28398044 MOAD: ic50=3.162nM
    382133 5mzj:A (2.0) BS01 TEP ? GO:0001609 ... P0ABE7
    P29274
    28712806
    382134 5mzj:A (2.0) BS02 CLR ? GO:0001609 ... P0ABE7
    P29274
    28712806
    382135 5mzj:A (2.0) BS03 CLR ? GO:0001609 ... P0ABE7
    P29274
    28712806
    382136 5mzj:A (2.0) BS04 CLR ? GO:0001609 ... P0ABE7
    P29274
    28712806
    382137 5mzk:A (1.82) BS01 FAD 1.14.13.9 GO:0003824 ... Q84HF5 28398044
    382138 5mzk:A (1.82) BS02 OK1 1.14.13.9 GO:0003824 ... Q84HF5 28398044 MOAD: ic50=251.2uM
    382139 5mzk:A (1.82) BS03 OK1 1.14.13.9 GO:0003824 ... Q84HF5 28398044 MOAD: ic50=251.2uM
    382140 5mzk:B (1.82) BS01 FAD 1.14.13.9 GO:0003824 ... Q84HF5 28398044
    382141 5mzk:B (1.82) BS02 OK1 1.14.13.9 GO:0003824 ... Q84HF5 28398044 MOAD: ic50=251.2uM
    382142 5mzl:A (1.955) BS01 peptide 2.7.11.1 GO:0004672 ... P11309 N/A
    382143 5mzl:A (1.955) BS02 8ET 2.7.11.1 GO:0004672 ... P11309 N/A
    382144 5mzm:A (2.4) BS01 peptide ? N/A P01899 29507106
    382145 5mzm:D (2.4) BS01 peptide ? N/A P01899 29507106
    382146 5mzn:A (1.787) BS01 ADP 3.6.4.- GO:0004386 ... Q00416 28408439
    382147 5mzo:A (3.48) BS01 CA ? GO:0003980 ... G0SB58 28739903
    382148 5mzp:A (2.1) BS01 CFF ? GO:0001609 ... P0ABE7
    P29274
    28712806
    382149 5mzp:A (2.1) BS02 CLR ? GO:0001609 ... P0ABE7
    P29274
    28712806
    382150 5mzp:A (2.1) BS03 CLR ? GO:0001609 ... P0ABE7
    P29274
    28712806
    382151 5mzp:A (2.1) BS04 CLR ? GO:0001609 ... P0ABE7
    P29274
    28712806
    382152 5mzq:A (2.8) BS01 2IL ? GO:0004888 ... Q7NDN8 29694907
    382153 5mzq:A (2.8) BS02 MBR ? GO:0004888 ... Q7NDN8 29694907
    382154 5mzq:B (2.8) BS01 2IL ? GO:0004888 ... Q7NDN8 29694907
    382155 5mzq:B (2.8) BS02 2IL ? GO:0004888 ... Q7NDN8 29694907
    382156 5mzq:B (2.8) BS03 MBR ? GO:0004888 ... Q7NDN8 29694907
    382157 5mzq:C (2.8) BS01 2IL ? GO:0004888 ... Q7NDN8 29694907
    382158 5mzq:C (2.8) BS02 2IL ? GO:0004888 ... Q7NDN8 29694907
    382159 5mzq:C (2.8) BS03 MBR ? GO:0004888 ... Q7NDN8 29694907
    382160 5mzq:D (2.8) BS01 2IL ? GO:0004888 ... Q7NDN8 29694907
    382161 5mzq:D (2.8) BS02 2IL ? GO:0004888 ... Q7NDN8 29694907
    382162 5mzq:D (2.8) BS03 MBR ? GO:0004888 ... Q7NDN8 29694907
    382163 5mzq:E (2.8) BS01 2IL ? GO:0004888 ... Q7NDN8 29694907
    382164 5mzq:E (2.8) BS02 2IL ? GO:0004888 ... Q7NDN8 29694907
    382165 5mzq:E (2.8) BS03 MBR ? GO:0004888 ... Q7NDN8 29694907
    382166 5mzr:A (2.65) BS01 PFL ? GO:0004888 ... Q7NDN8 N/A
    382167 5mzr:C (2.65) BS01 PFL ? GO:0004888 ... Q7NDN8 N/A
    382168 5mzr:D (2.65) BS01 PFL ? GO:0004888 ... Q7NDN8 N/A
    382169 5mzr:E (2.65) BS01 PFL ? GO:0004888 ... Q7NDN8 N/A
    382170 5mzt:A (2.65) BS01 MBR ? GO:0004888 ... Q7NDN8 N/A
    382171 5mzt:A (2.65) BS02 MBR ? GO:0004888 ... Q7NDN8 N/A
    382172 5mzt:B (2.65) BS01 MBR ? GO:0004888 ... Q7NDN8 N/A
    382173 5mzt:B (2.65) BS02 MBR ? GO:0004888 ... Q7NDN8 N/A
    382174 5mzt:C (2.65) BS01 MBR ? GO:0004888 ... Q7NDN8 N/A
    382175 5mzt:C (2.65) BS02 MBR ? GO:0004888 ... Q7NDN8 N/A
    382176 5mzt:D (2.65) BS01 MBR ? GO:0004888 ... Q7NDN8 N/A
    382177 5mzt:D (2.65) BS02 MBR ? GO:0004888 ... Q7NDN8 N/A
    382178 5mzt:E (2.65) BS01 MBR ? GO:0004888 ... Q7NDN8 N/A
    382179 5mzt:E (2.65) BS02 MBR ? GO:0004888 ... Q7NDN8 N/A
    382180 5mzv:A (2.8) BS01 MAN ? GO:0004896 ... P29460 29287995
    382181 5mzx:B (2.0) BS01 4PS ? GO:0008410 ... Q1D4I3 28508504
    382182 5mzx:D (2.0) BS01 4PS ? GO:0008410 ... Q1D4I3 28508504
    382183 5mzy:B (1.6) BS01 8EZ ? GO:0008410 ... Q1D4I3 28508504
    382184 5mzy:D (1.6) BS01 8EZ ? GO:0008410 ... Q1D4I3 28508504
    382185 5mzz:B (2.3) BS01 8EW ? GO:0008410 ... Q1D4I3 28508504
    382186 5mzz:D (2.3) BS01 8EW ? GO:0008410 ... Q1D4I3 28508504
    382187 5n04:A (1.76) BS01 CU 3.2.1.4 GO:0004497 ... A0A0S2GKZ1 28364950
    382188 5n05:A (1.58) BS01 BGC 3.2.1.4 GO:0004497 ... A0A0S2GKZ1 28364950
    382189 5n05:A (1.58) BS02 BGC 3.2.1.4 GO:0004497 ... A0A0S2GKZ1 28364950
    382190 5n05:A (1.58) BS03 CU 3.2.1.4 GO:0004497 ... A0A0S2GKZ1 28364950
    382191 5n07:A (1.95) BS01 SF4 ? GO:0003677 ... Q9L132 28425466
    382192 5n09:A (3.9) BS01 FUC ? GO:0046983 ... A0A0B4SHY9 28534525
    382193 5n09:B (3.9) BS01 FUC ? GO:0046983 ... A0A0B4SHY9 28534525
    382194 5n0a:A (3.9) BS01 FUC ? GO:0046983 ... A0A0B4SHY9 28534525
    382195 5n0a:B (3.9) BS01 FUC ? GO:0046983 ... A0A0B4SHY9 28534525
    382196 5n0a:L (3.9) BS01 MAN N/A N/A N/A 28534525
    382197 5n0b:A (2.6) BS01 GAL 3.4.24.68 GO:0004222 ... P04958 28645943
    382198 5n0b:A (2.6) BS02 ZN 3.4.24.68 GO:0004222 ... P04958 28645943
    382199 5n0c:A (2.6) BS01 GAL 3.4.24.68 GO:0004222 ... P04958 28645943
    382200 5n0c:A (2.6) BS02 ZN 3.4.24.68 GO:0004222 ... P04958 28645943

    Reference:
  • Chengxin Zhang, Xi Zhang, Lydia Freddolino, and Yang Zhang. BioLiP2: an updated structure database for biologically relevent ligand-protein interactions, Nucleic Acids Research, gkad630 (2023).
  • Jianyi Yang, Ambrish Roy, and Yang Zhang. BioLiP: a semi-manually curated database for biologically relevant ligand-protein interactions, Nucleic Acids Research, 41: D1096-D1103 (2013) (download the PDF file).