SEQ2FUN

BioLiP
Download all results in tab-seperated text for 942758 receptor-ligand interactions, whose format is explained at readme.txt.
  • Hover over PDB to view the title of the structure. Click PDB to view the structure at the RCSB PDB database. Resolution -1.00 means the resolution is unavailable, e.g., for NMR structures.
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    # PDB
    (Resolution Å)
    Site # Ligand EC number GO terms UniProt PubMed Binding
    affinity
    382801 5n62:B (1.8) BS01 MN ? GO:0001523 ... P02766 30213975
    382802 5n63:A (2.4) BS01 8OW 2.7.11.24 GO:0000077 ... Q16539 28892510
    382803 5n64:A (2.4) BS01 8OH 2.7.11.24 GO:0000077 ... Q16539 28892510
    382804 5n65:A (2.0) BS01 8OT 2.7.11.24 GO:0000077 ... Q16539 28892510
    382805 5n65:A (2.0) BS02 8OT 2.7.11.24 GO:0000077 ... Q16539 28892510
    382806 5n66:A (2.4) BS01 BW1 2.7.11.24 GO:0000077 ... Q16539 28892510
    382807 5n66:A (2.4) BS02 B96 2.7.11.24 GO:0000077 ... Q16539 28892510 BindingDB: Kd=0.1nM, IC50=12nM, Ki=22nM, koff=0.000008s-1, kon=84900M-1-s-1
    382808 5n67:A (1.9) BS01 8ON 2.7.11.24 GO:0000077 ... Q16539 28892510
    382809 5n68:A (1.85) BS01 8OK 2.7.11.24 GO:0000077 ... Q16539 28892510
    382810 5n69:A (2.45) BS01 ADP ? GO:0003774 ... Q9BE39 28775348
    382811 5n69:A (2.45) BS02 MG ? GO:0003774 ... Q9BE39 28775348
    382812 5n69:A (2.45) BS03 2OW ? GO:0003774 ... Q9BE39 28775348 MOAD: Kd=0.29uM
    382813 5n69:B (2.45) BS01 ADP ? GO:0003774 ... Q9BE39 28775348
    382814 5n69:B (2.45) BS02 MG ? GO:0003774 ... Q9BE39 28775348
    382815 5n69:B (2.45) BS03 2OW ? GO:0003774 ... Q9BE39 28775348 MOAD: Kd=0.29uM
    382816 5n69:B (2.45) BS04 TCE ? GO:0003774 ... Q9BE39 28775348
    382817 5n6a:A (3.1) BS01 ADP ? GO:0003774 ... Q9BE39 28775348
    382818 5n6a:A (3.1) BS02 MG ? GO:0003774 ... Q9BE39 28775348
    382819 5n6b:A (1.71) BS01 peptide ? N/A P04439 28975614
    382820 5n6b:D (1.71) BS01 peptide ? N/A P04439 28975614
    382821 5n6b:D (1.71) BS02 peptide ? N/A P04439 28975614
    382822 5n6c:A (2.3) BS01 NAD 1.1.1.37
    1.1.1.399
    1.1.1.95
    GO:0016616 ... O43175 29262655 MOAD: Ka=22500M^-1
    382823 5n6c:B (2.3) BS01 NAD 1.1.1.37
    1.1.1.399
    1.1.1.95
    GO:0016616 ... O43175 29262655 MOAD: Ka=22500M^-1
    382824 5n6f:A (1.1191) BS01 ZN 2.4.2.29 GO:0002099 ... P28720 31808981
    382825 5n6f:A (1.1191) BS02 GUN 2.4.2.29 GO:0002099 ... P28720 31808981
    382826 5n6g:A (1.58) BS01 FMN ? GO:0000166 ... O31246 28485453
    382827 5n6g:A (1.58) BS02 8OZ ? GO:0000166 ... O31246 28485453
    382828 5n6i:A (3.6) BS01 dna 2.7.7.86 N/A Q8C6L5 28902841
    382829 5n6i:A (3.6) BS02 dna 2.7.7.86 N/A Q8C6L5 28902841
    382830 5n6i:A (3.6) BS03 dna 2.7.7.86 N/A Q8C6L5 28902841
    382831 5n6i:A (3.6) BS04 dna 2.7.7.86 N/A Q8C6L5 28902841
    382832 5n6i:A (3.6) BS05 ZN 2.7.7.86 N/A Q8C6L5 28902841
    382833 5n6i:B (3.6) BS01 dna 2.7.7.86 N/A Q8C6L5 28902841
    382834 5n6i:B (3.6) BS02 dna 2.7.7.86 N/A Q8C6L5 28902841
    382835 5n6i:B (3.6) BS03 dna 2.7.7.86 N/A Q8C6L5 28902841
    382836 5n6i:B (3.6) BS04 dna 2.7.7.86 N/A Q8C6L5 28902841
    382837 5n6i:B (3.6) BS05 ZN 2.7.7.86 N/A Q8C6L5 28902841
    382838 5n6i:C (3.6) BS01 dna 2.7.7.86 N/A Q8C6L5 28902841
    382839 5n6i:C (3.6) BS02 dna 2.7.7.86 N/A Q8C6L5 28902841
    382840 5n6i:C (3.6) BS03 dna 2.7.7.86 N/A Q8C6L5 28902841
    382841 5n6i:C (3.6) BS04 dna 2.7.7.86 N/A Q8C6L5 28902841
    382842 5n6i:C (3.6) BS05 ZN 2.7.7.86 N/A Q8C6L5 28902841
    382843 5n6i:D (3.6) BS01 dna 2.7.7.86 N/A Q8C6L5 28902841
    382844 5n6i:D (3.6) BS02 dna 2.7.7.86 N/A Q8C6L5 28902841
    382845 5n6i:D (3.6) BS03 dna 2.7.7.86 N/A Q8C6L5 28902841
    382846 5n6i:D (3.6) BS04 dna 2.7.7.86 N/A Q8C6L5 28902841
    382847 5n6i:D (3.6) BS05 ZN 2.7.7.86 N/A Q8C6L5 28902841
    382848 5n6i:E (3.6) BS01 dna 2.7.7.86 N/A Q8C6L5 28902841
    382849 5n6i:E (3.6) BS02 dna 2.7.7.86 N/A Q8C6L5 28902841
    382850 5n6i:E (3.6) BS03 dna 2.7.7.86 N/A Q8C6L5 28902841
    382851 5n6i:E (3.6) BS04 dna 2.7.7.86 N/A Q8C6L5 28902841
    382852 5n6i:E (3.6) BS05 ZN 2.7.7.86 N/A Q8C6L5 28902841
    382853 5n6i:F (3.6) BS01 dna 2.7.7.86 N/A Q8C6L5 28902841
    382854 5n6i:F (3.6) BS02 dna 2.7.7.86 N/A Q8C6L5 28902841
    382855 5n6i:F (3.6) BS03 dna 2.7.7.86 N/A Q8C6L5 28902841
    382856 5n6i:F (3.6) BS04 dna 2.7.7.86 N/A Q8C6L5 28902841
    382857 5n6i:F (3.6) BS05 ZN 2.7.7.86 N/A Q8C6L5 28902841
    382858 5n6n:C (2.29) BS01 GLC 3.2.1.28 GO:0004555 ... P32356 29087344
    382859 5n6n:C (2.29) BS02 FRU 3.2.1.28 GO:0004555 ... P32356 29087344
    382860 5n6n:C (2.29) BS03 GLC 3.2.1.28 GO:0004555 ... P32356 29087344
    382861 5n6n:C (2.29) BS04 FRU 3.2.1.28 GO:0004555 ... P32356 29087344
    382862 5n6n:C (2.29) BS05 GLC 3.2.1.28 GO:0004555 ... P32356 29087344
    382863 5n6n:C (2.29) BS06 CA 3.2.1.28 GO:0004555 ... P32356 29087344
    382864 5n6o:A (2.59) BS01 GDP 3.6.5.2 GO:0001764 ... P63000 29089502
    382865 5n6o:B (2.59) BS01 GDP 3.6.5.2 GO:0001764 ... P63000 29089502
    382866 5n6q:A (2.2) BS01 8OZ ? GO:0000166 ... Q9R9V9 28485453
    382867 5n6q:A (2.2) BS02 FMN ? GO:0000166 ... Q9R9V9 28485453
    382868 5n6q:B (2.2) BS01 FMN ? GO:0000166 ... Q9R9V9 28485453
    382869 5n6q:B (2.2) BS02 8OZ ? GO:0000166 ... Q9R9V9 28485453
    382870 5n6s:A (2.1) BS01 8P5 3.2.1.21 GO:0004553 ... Q08638 28463498
    382871 5n6s:B (2.1) BS01 8P5 3.2.1.21 GO:0004553 ... Q08638 28463498
    382872 5n6s:C (2.1) BS01 8P5 3.2.1.21 GO:0004553 ... Q08638 28463498
    382873 5n6s:D (2.1) BS01 8P5 3.2.1.21 GO:0004553 ... Q08638 28463498
    382874 5n6t:A (2.1) BS01 8P2 3.2.1.21 GO:0004553 ... Q08638 28463498
    382875 5n6t:B (2.1) BS01 8P2 3.2.1.21 GO:0004553 ... Q08638 28463498
    382876 5n6u:A (3.08) BS01 BMA 3.2.1.25 GO:0004553 ... B5YAN4 28385558
    382877 5n6u:B (3.08) BS01 BMA 3.2.1.25 GO:0004553 ... B5YAN4 28385558
    382878 5n6u:C (3.08) BS01 BMA 3.2.1.25 GO:0004553 ... B5YAN4 28385558
    382879 5n6u:D (3.08) BS01 BMA 3.2.1.25 GO:0004553 ... B5YAN4 28385558
    382880 5n6v:A (1.6) BS01 GLC 2.4.1.4 GO:0005576 ... Q9ZEU2 N/A
    382881 5n6v:A (1.6) BS02 FRU 2.4.1.4 GO:0005576 ... Q9ZEU2 N/A
    382882 5n6v:A (1.6) BS03 GLC 2.4.1.4 GO:0005576 ... Q9ZEU2 N/A
    382883 5n6v:A (1.6) BS04 FRU 2.4.1.4 GO:0005576 ... Q9ZEU2 N/A
    382884 5n6x:A (1.75) BS01 MN ? GO:0016791 ... Q5GA16 28389563
    382885 5n6x:B (1.75) BS01 MN ? GO:0016791 ... Q5GA16 28389563
    382886 5n6x:B (1.75) BS02 MN ? GO:0016791 ... Q5GA16 28389563
    382887 5n6y:A (1.35) BS01 8P8 1.18.6.1 GO:0005524 ... P16855 28692069
    382888 5n6y:A (1.35) BS02 CO3 1.18.6.1 GO:0005524 ... P16855 28692069
    382889 5n6y:A (1.35) BS03 CLF 1.18.6.1 GO:0005524 ... P16855 28692069
    382890 5n6y:B (1.35) BS01 CLF 1.18.6.1 GO:0005524 ... P16856 28692069
    382891 5n6y:D (1.35) BS01 CLF 1.18.6.1 GO:0005524 ... P16855 28692069
    382892 5n6y:D (1.35) BS02 8P8 1.18.6.1 GO:0005524 ... P16855 28692069
    382893 5n6y:D (1.35) BS03 CO3 1.18.6.1 GO:0005524 ... P16855 28692069
    382894 5n6y:E (1.35) BS01 CLF 1.18.6.1 GO:0005524 ... P16856 28692069
    382895 5n70:A (1.81) BS01 peptide ? GO:0004190 ... V5HCK7 29396291
    382896 5n74:A (2.3) BS01 peptide ? GO:0008017 ... H0XPX6 28552577
    382897 5n74:A (2.3) BS02 peptide ? GO:0008017 ... H0XPX6 28552577
    382898 5n74:B (2.3) BS01 peptide ? GO:0008017 ... H0XPX6 28552577
    382899 5n74:B (2.3) BS02 peptide ? GO:0008017 ... H0XPX6 28552577
    382900 5n74:C (2.3) BS01 peptide ? GO:0008017 ... H0XPX6 28552577
    382901 5n74:C (2.3) BS02 peptide ? GO:0008017 ... H0XPX6 28552577
    382902 5n74:D (2.3) BS01 peptide ? GO:0008017 ... H0XPX6 28552577
    382903 5n74:D (2.3) BS02 peptide ? GO:0008017 ... H0XPX6 28552577
    382904 5n74:E (2.3) BS01 peptide ? GO:0008017 ... H0XPX6 28552577
    382905 5n74:E (2.3) BS02 peptide ? GO:0008017 ... H0XPX6 28552577
    382906 5n74:F (2.3) BS01 peptide ? GO:0008017 ... H0XPX6 28552577
    382907 5n74:F (2.3) BS02 peptide ? GO:0008017 ... H0XPX6 28552577
    382908 5n74:G (2.3) BS01 peptide ? GO:0008017 ... H0XPX6 28552577
    382909 5n74:G (2.3) BS02 peptide ? GO:0008017 ... H0XPX6 28552577
    382910 5n74:H (2.3) BS01 peptide ? GO:0008017 ... H0XPX6 28552577
    382911 5n74:H (2.3) BS02 peptide ? GO:0008017 ... H0XPX6 28552577
    382912 5n75:A (1.803) BS01 peptide ? GO:0000122 ... P31947 28681606
    382913 5n75:A (1.803) BS02 MG ? GO:0000122 ... P31947 28681606
    382914 5n7b:H (1.7) BS01 peptide ? N/A P01727
    P01801
    30726084
    382915 5n7c:A (2.45) BS01 CU ? GO:0001523 ... P02766 30213975
    382916 5n7c:B (2.45) BS01 CU ? GO:0001523 ... P02766 30213975
    382917 5n7d:A (2.3) BS01 peptide ? GO:0001525 ... P07355
    Q96QZ7
    29083550
    382918 5n7d:A (2.3) BS02 CA ? GO:0001525 ... P07355
    Q96QZ7
    29083550
    382919 5n7d:A (2.3) BS03 CA ? GO:0001525 ... P07355
    Q96QZ7
    29083550
    382920 5n7d:A (2.3) BS04 CA ? GO:0001525 ... P07355
    Q96QZ7
    29083550
    382921 5n7d:B (2.3) BS01 CA ? GO:0001525 ... P07355
    Q96QZ7
    29083550
    382922 5n7d:B (2.3) BS02 CA ? GO:0001525 ... P07355
    Q96QZ7
    29083550
    382923 5n7d:B (2.3) BS03 CA ? GO:0001525 ... P07355
    Q96QZ7
    29083550
    382924 5n7f:A (2.3) BS01 peptide ? GO:0001525 ... P07355
    Q96QZ7
    29083550
    382925 5n7f:A (2.3) BS02 CA ? GO:0001525 ... P07355
    Q96QZ7
    29083550
    382926 5n7f:A (2.3) BS03 CA ? GO:0001525 ... P07355
    Q96QZ7
    29083550
    382927 5n7f:A (2.3) BS04 CA ? GO:0001525 ... P07355
    Q96QZ7
    29083550
    382928 5n7f:A (2.3) BS05 CA ? GO:0001525 ... P07355
    Q96QZ7
    29083550
    382929 5n7f:B (2.3) BS01 CA ? GO:0001525 ... P07355
    Q96QZ7
    29083550
    382930 5n7f:B (2.3) BS02 CA ? GO:0001525 ... P07355
    Q96QZ7
    29083550
    382931 5n7g:A (2.95) BS01 peptide ? GO:0001525 ... P07355
    Q96QZ7
    29083550
    382932 5n7g:A (2.95) BS02 CA ? GO:0001525 ... P07355
    Q96QZ7
    29083550
    382933 5n7g:A (2.95) BS03 CA ? GO:0001525 ... P07355
    Q96QZ7
    29083550
    382934 5n7g:A (2.95) BS04 CA ? GO:0001525 ... P07355
    Q96QZ7
    29083550
    382935 5n7g:A (2.95) BS05 CA ? GO:0001525 ... P07355
    Q96QZ7
    29083550
    382936 5n7g:B (2.95) BS01 CA ? GO:0001525 ... P07355
    Q96QZ7
    29083550
    382937 5n7g:B (2.95) BS02 CA ? GO:0001525 ... P07355
    Q96QZ7
    29083550
    382938 5n7j:A (2.001) BS01 GLC 2.4.1.4 GO:0005576 ... Q9ZEU2 28732882
    382939 5n7j:A (2.001) BS02 FRU 2.4.1.4 GO:0005576 ... Q9ZEU2 28732882
    382940 5n7j:A (2.001) BS03 GLC 2.4.1.4 GO:0005576 ... Q9ZEU2 28732882
    382941 5n7j:A (2.001) BS04 GLC 2.4.1.4 GO:0005576 ... Q9ZEU2 28732882
    382942 5n7j:A (2.001) BS05 FRU 2.4.1.4 GO:0005576 ... Q9ZEU2 28732882
    382943 5n7j:A (2.001) BS06 GLC 2.4.1.4 GO:0005576 ... Q9ZEU2 28732882
    382944 5n7l:A (2.501) BS01 GLU ? N/A P25060 30425318
    382945 5n7l:A (2.501) BS02 GLU ? N/A P25060 30425318
    382946 5n7m:A (1.73) BS01 GAL ? N/A Q83884 28505592
    382947 5n7m:A (1.73) BS02 FUC ? N/A Q83884 28505592
    382948 5n7m:B (1.73) BS01 GAL ? N/A Q83884 28505592
    382949 5n7m:B (1.73) BS02 FUC ? N/A Q83884 28505592
    382950 5n7o:A (2.3) BS01 69Y ? GO:0000976 ... O53623 28416386
    382951 5n7o:B (2.3) BS01 69Y ? GO:0000976 ... O53623 28416386
    382952 5n7p:A (1.501) BS01 peptide 2.7.11.11 GO:0000287 ... P25321 N/A
    382953 5n7p:A (1.501) BS02 E9Q 2.7.11.11 GO:0000287 ... P25321 N/A
    382954 5n7q:A (1.45) BS01 peptide ? GO:0004190 ... V5HCK7 29396291
    382955 5n7q:B (1.45) BS01 peptide ? GO:0004190 ... V5HCK7 29396291
    382956 5n7t:A (1.81) BS01 FAD 1.14.13.9 GO:0003824 ... Q84HF5 28336141
    382957 5n7t:A (1.81) BS02 JHY 1.14.13.9 GO:0003824 ... Q84HF5 28336141 MOAD: ic50=6.3nM
    382958 5n7t:B (1.81) BS01 FAD 1.14.13.9 GO:0003824 ... Q84HF5 28336141
    382959 5n7t:B (1.81) BS02 JHY 1.14.13.9 GO:0003824 ... Q84HF5 28336141 MOAD: ic50=6.3nM
    382960 5n7u:A (1.371) BS01 peptide 2.7.11.11 GO:0000287 ... P25321 N/A
    382961 5n7u:A (1.371) BS02 8PQ 2.7.11.11 GO:0000287 ... P25321 N/A
    382962 5n7v:A (2.52) BS01 8PT 2.7.12.1 GO:0004672 ... P33981 28539250 BindingDB: IC50=1.8nM
    382963 5n7x:A (1.12) BS01 peptide ? GO:0009374 ... P22629 28935886
    382964 5n7x:A (1.12) BS02 peptide ? GO:0009374 ... P22629 28935886
    382965 5n7x:B (1.12) BS01 peptide ? GO:0009374 ... P22629 28935886
    382966 5n7x:B (1.12) BS02 peptide ? GO:0009374 ... P22629 28935886
    382967 5n7x:E (1.12) BS01 peptide ? GO:0009374 ... P22629 28935886
    382968 5n7x:E (1.12) BS02 peptide ? GO:0009374 ... P22629 28935886
    382969 5n7x:F (1.12) BS01 peptide ? GO:0009374 ... P22629 28935886
    382970 5n7x:F (1.12) BS02 peptide ? GO:0009374 ... P22629 28935886
    382971 5n7x:H (1.12) BS01 peptide ? GO:0009374 ... P22629 28935886
    382972 5n7x:H (1.12) BS02 peptide ? GO:0009374 ... P22629 28935886
    382973 5n7x:K (1.12) BS01 peptide ? GO:0009374 ... P22629 28935886
    382974 5n7x:K (1.12) BS02 peptide ? GO:0009374 ... P22629 28935886
    382975 5n7x:M (1.12) BS01 peptide ? GO:0009374 ... P22629 28935886
    382976 5n7x:M (1.12) BS02 peptide ? GO:0009374 ... P22629 28935886
    382977 5n7x:O (1.12) BS01 peptide ? GO:0009374 ... P22629 28935886
    382978 5n7x:O (1.12) BS02 peptide ? GO:0009374 ... P22629 28935886
    382979 5n7y:A (-1.00) BS01 ZN ? N/A P37534 29526435
    382980 5n7y:C (-1.00) BS01 ZN ? N/A P37534 29526435
    382981 5n80:A (1.92) BS01 UDP 2.4.1.- GO:0009103 ... Q06994 N/A
    382982 5n81:A (1.6) BS01 8Q2 5.1.1.11 N/A P09095 29461527
    382983 5n81:B (1.6) BS01 8Q2 5.1.1.11 N/A P09095 29461527
    382984 5n82:A (1.708) BS01 8PZ 5.1.1.11 N/A P09095 29461527
    382985 5n84:A (2.3) BS01 8Q5 2.7.12.1 GO:0004672 ... P33981 28539250 MOAD: Kd=11nM
    BindingDB: IC50=10.0nM
    382986 5n85:A (2.0) BS01 peptide ? GO:0003677 ... P27694 28534480
    382987 5n87:A (2.29) BS01 N66 2.7.12.1 GO:0004672 ... P33981 28539250 MOAD: Kd=0.56nM
    382988 5n89:A (1.27) BS01 peptide ? GO:0009374 ... P22629 28935886
    382989 5n89:A (1.27) BS02 peptide ? GO:0009374 ... P22629 28935886
    382990 5n89:B (1.27) BS01 peptide ? GO:0009374 ... P22629 28935886
    382991 5n89:B (1.27) BS02 peptide ? GO:0009374 ... P22629 28935886
    382992 5n89:D (1.27) BS01 peptide ? GO:0009374 ... P22629 28935886
    382993 5n89:D (1.27) BS02 peptide ? GO:0009374 ... P22629 28935886
    382994 5n89:F (1.27) BS01 peptide ? GO:0009374 ... P22629 28935886
    382995 5n89:F (1.27) BS02 peptide ? GO:0009374 ... P22629 28935886
    382996 5n89:H (1.27) BS01 peptide ? GO:0009374 ... P22629 28935886
    382997 5n89:H (1.27) BS02 peptide ? GO:0009374 ... P22629 28935886
    382998 5n89:K (1.27) BS01 peptide ? GO:0009374 ... P22629 28935886
    382999 5n89:K (1.27) BS02 peptide ? GO:0009374 ... P22629 28935886
    383000 5n89:M (1.27) BS01 peptide ? GO:0009374 ... P22629 28935886

    Reference:
  • Chengxin Zhang, Xi Zhang, Lydia Freddolino, and Yang Zhang. BioLiP2: an updated structure database for biologically relevent ligand-protein interactions, Nucleic Acids Research, gkad630 (2023).
  • Jianyi Yang, Ambrish Roy, and Yang Zhang. BioLiP: a semi-manually curated database for biologically relevant ligand-protein interactions, Nucleic Acids Research, 41: D1096-D1103 (2013) (download the PDF file).