SEQ2FUN

BioLiP
Download all results in tab-seperated text for 942758 receptor-ligand interactions, whose format is explained at readme.txt.
  • Hover over PDB to view the title of the structure. Click PDB to view the structure at the RCSB PDB database. Resolution -1.00 means the resolution is unavailable, e.g., for NMR structures.
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    # PDB
    (Resolution Å)
    Site # Ligand EC number GO terms UniProt PubMed Binding
    affinity
    383001 5n89:M (1.27) BS02 peptide ? GO:0009374 ... P22629 28935886
    383002 5n89:O (1.27) BS01 peptide ? GO:0009374 ... P22629 28935886
    383003 5n89:O (1.27) BS02 peptide ? GO:0009374 ... P22629 28935886
    383004 5n8a:A (1.28) BS01 peptide ? GO:0003677 ... P27694 28534480
    383005 5n8b:A (1.03) BS01 peptide ? GO:0009374 ... P22629 28935886
    383006 5n8b:A (1.03) BS02 peptide ? GO:0009374 ... P22629 28935886
    383007 5n8b:B (1.03) BS01 peptide ? GO:0009374 ... P22629 28935886
    383008 5n8b:B (1.03) BS02 peptide ? GO:0009374 ... P22629 28935886
    383009 5n8b:D (1.03) BS01 peptide ? GO:0009374 ... P22629 28935886
    383010 5n8b:D (1.03) BS02 peptide ? GO:0009374 ... P22629 28935886
    383011 5n8b:G (1.03) BS01 peptide ? GO:0009374 ... P22629 28935886
    383012 5n8b:G (1.03) BS02 peptide ? GO:0009374 ... P22629 28935886
    383013 5n8c:A (1.9) BS01 ZN 3.5.1.108 GO:0006796 ... P47205 28302397
    383014 5n8c:A (1.9) BS02 8Q8 3.5.1.108 GO:0006796 ... P47205 28302397
    383015 5n8c:B (1.9) BS01 ZN 3.5.1.108 GO:0006796 ... P47205 28302397
    383016 5n8c:B (1.9) BS02 8Q8 3.5.1.108 GO:0006796 ... P47205 28302397
    383017 5n8e:A (1.1) BS01 peptide ? GO:0009374 ... P22629 28935886
    383018 5n8e:A (1.1) BS02 peptide ? GO:0009374 ... P22629 28935886
    383019 5n8e:B (1.1) BS01 peptide ? GO:0009374 ... P22629 28935886
    383020 5n8e:C (1.1) BS01 peptide ? GO:0009374 ... P22629 28935886
    383021 5n8e:C (1.1) BS02 peptide ? GO:0009374 ... P22629 28935886
    383022 5n8e:D (1.1) BS01 peptide ? GO:0009374 ... P22629 28935886
    383023 5n8f:A (1.38) BS01 CU 1.7.2.1 GO:0005507 ... P25006 28875036
    383024 5n8f:A (1.38) BS02 CU 1.7.2.1 GO:0005507 ... P25006 28875036
    383025 5n8g:A (1.47) BS01 CU 1.7.2.1 GO:0005507 ... P25006 28875036
    383026 5n8g:A (1.47) BS02 CU 1.7.2.1 GO:0005507 ... P25006 28875036
    383027 5n8h:A (1.65) BS01 CU 1.7.2.1 GO:0005507 ... P25006 28875036
    383028 5n8h:A (1.65) BS02 CU 1.7.2.1 GO:0005507 ... P25006 28875036
    383029 5n8i:A (1.4) BS01 CU 1.7.2.1 GO:0005507 ... P25006 28875036
    383030 5n8i:A (1.4) BS02 CU 1.7.2.1 GO:0005507 ... P25006 28875036
    383031 5n8j:A (1.05) BS01 peptide ? GO:0009374 ... P22629 28935886
    383032 5n8j:B (1.05) BS01 peptide ? GO:0009374 ... P22629 28935886
    383033 5n8j:D (1.05) BS01 peptide ? GO:0009374 ... P22629 28935886
    383034 5n8l:A (-1.00) BS01 rna ? N/A Q15633 29449323
    383035 5n8l:A (-1.00) BS02 rna ? N/A Q15633 29449323
    383036 5n8m:A (-1.00) BS01 rna ? N/A Q15633 29449323
    383037 5n8m:A (-1.00) BS02 rna ? N/A Q15633 29449323
    383038 5n8o:A (3.9) BS01 dna 3.6.4.12
    5.6.2.1
    GO:0003677 ... P14565 28457609
    383039 5n8p:A (2.7) BS01 CA ? GO:0005509 ... P35828 28418382
    383040 5n8p:A (2.7) BS02 CA ? GO:0005509 ... P35828 28418382
    383041 5n8p:A (2.7) BS03 CA ? GO:0005509 ... P35828 28418382
    383042 5n8p:A (2.7) BS04 CA ? GO:0005509 ... P35828 28418382
    383043 5n8p:A (2.7) BS05 CA ? GO:0005509 ... P35828 28418382
    383044 5n8p:A (2.7) BS06 CA ? GO:0005509 ... P35828 28418382
    383045 5n8p:A (2.7) BS07 CA ? GO:0005509 ... P35828 28418382
    383046 5n8p:A (2.7) BS08 CA ? GO:0005509 ... P35828 28418382
    383047 5n8p:A (2.7) BS09 CA ? GO:0005509 ... P35828 28418382
    383048 5n8p:A (2.7) BS10 CA ? GO:0005509 ... P35828 28418382
    383049 5n8p:A (2.7) BS11 CA ? GO:0005509 ... P35828 28418382
    383050 5n8p:A (2.7) BS12 CA ? GO:0005509 ... P35828 28418382
    383051 5n8p:A (2.7) BS13 CA ? GO:0005509 ... P35828 28418382
    383052 5n8p:A (2.7) BS14 CA ? GO:0005509 ... P35828 28418382
    383053 5n8p:A (2.7) BS15 CA ? GO:0005509 ... P35828 28418382
    383054 5n8p:A (2.7) BS16 CA ? GO:0005509 ... P35828 28418382
    383055 5n8p:A (2.7) BS17 CA ? GO:0005509 ... P35828 28418382
    383056 5n8p:A (2.7) BS18 CA ? GO:0005509 ... P35828 28418382
    383057 5n8p:A (2.7) BS19 CA ? GO:0005509 ... P35828 28418382
    383058 5n8p:B (2.7) BS01 CA ? GO:0005509 ... P35828 28418382
    383059 5n8p:B (2.7) BS02 CA ? GO:0005509 ... P35828 28418382
    383060 5n8p:B (2.7) BS03 CA ? GO:0005509 ... P35828 28418382
    383061 5n8p:B (2.7) BS04 CA ? GO:0005509 ... P35828 28418382
    383062 5n8p:B (2.7) BS05 CA ? GO:0005509 ... P35828 28418382
    383063 5n8p:B (2.7) BS06 CA ? GO:0005509 ... P35828 28418382
    383064 5n8p:B (2.7) BS07 CA ? GO:0005509 ... P35828 28418382
    383065 5n8p:B (2.7) BS08 CA ? GO:0005509 ... P35828 28418382
    383066 5n8p:B (2.7) BS09 CA ? GO:0005509 ... P35828 28418382
    383067 5n8p:B (2.7) BS10 CA ? GO:0005509 ... P35828 28418382
    383068 5n8p:B (2.7) BS11 CA ? GO:0005509 ... P35828 28418382
    383069 5n8p:B (2.7) BS12 CA ? GO:0005509 ... P35828 28418382
    383070 5n8p:B (2.7) BS13 CA ? GO:0005509 ... P35828 28418382
    383071 5n8p:B (2.7) BS14 CA ? GO:0005509 ... P35828 28418382
    383072 5n8p:B (2.7) BS15 CA ? GO:0005509 ... P35828 28418382
    383073 5n8p:B (2.7) BS16 CA ? GO:0005509 ... P35828 28418382
    383074 5n8p:B (2.7) BS17 CA ? GO:0005509 ... P35828 28418382
    383075 5n8p:B (2.7) BS18 CA ? GO:0005509 ... P35828 28418382
    383076 5n8p:C (2.7) BS01 CA ? GO:0005509 ... P35828 28418382
    383077 5n8p:C (2.7) BS02 CA ? GO:0005509 ... P35828 28418382
    383078 5n8p:C (2.7) BS03 CA ? GO:0005509 ... P35828 28418382
    383079 5n8p:C (2.7) BS04 CA ? GO:0005509 ... P35828 28418382
    383080 5n8p:C (2.7) BS05 CA ? GO:0005509 ... P35828 28418382
    383081 5n8p:C (2.7) BS06 CA ? GO:0005509 ... P35828 28418382
    383082 5n8p:C (2.7) BS07 CA ? GO:0005509 ... P35828 28418382
    383083 5n8p:C (2.7) BS08 CA ? GO:0005509 ... P35828 28418382
    383084 5n8p:C (2.7) BS09 CA ? GO:0005509 ... P35828 28418382
    383085 5n8p:C (2.7) BS10 CA ? GO:0005509 ... P35828 28418382
    383086 5n8p:C (2.7) BS11 CA ? GO:0005509 ... P35828 28418382
    383087 5n8p:C (2.7) BS12 CA ? GO:0005509 ... P35828 28418382
    383088 5n8p:C (2.7) BS13 CA ? GO:0005509 ... P35828 28418382
    383089 5n8p:C (2.7) BS14 CA ? GO:0005509 ... P35828 28418382
    383090 5n8p:C (2.7) BS15 CA ? GO:0005509 ... P35828 28418382
    383091 5n8p:C (2.7) BS16 CA ? GO:0005509 ... P35828 28418382
    383092 5n8p:C (2.7) BS17 CA ? GO:0005509 ... P35828 28418382
    383093 5n8p:C (2.7) BS18 CA ? GO:0005509 ... P35828 28418382
    383094 5n8p:C (2.7) BS19 CA ? GO:0005509 ... P35828 28418382
    383095 5n8p:D (2.7) BS01 CA ? GO:0005509 ... P35828 28418382
    383096 5n8p:D (2.7) BS02 CA ? GO:0005509 ... P35828 28418382
    383097 5n8p:D (2.7) BS03 CA ? GO:0005509 ... P35828 28418382
    383098 5n8p:D (2.7) BS04 CA ? GO:0005509 ... P35828 28418382
    383099 5n8p:D (2.7) BS05 CA ? GO:0005509 ... P35828 28418382
    383100 5n8p:D (2.7) BS06 CA ? GO:0005509 ... P35828 28418382
    383101 5n8p:D (2.7) BS07 CA ? GO:0005509 ... P35828 28418382
    383102 5n8p:D (2.7) BS08 CA ? GO:0005509 ... P35828 28418382
    383103 5n8p:D (2.7) BS09 CA ? GO:0005509 ... P35828 28418382
    383104 5n8p:D (2.7) BS10 CA ? GO:0005509 ... P35828 28418382
    383105 5n8p:D (2.7) BS11 CA ? GO:0005509 ... P35828 28418382
    383106 5n8p:D (2.7) BS12 CA ? GO:0005509 ... P35828 28418382
    383107 5n8p:D (2.7) BS13 CA ? GO:0005509 ... P35828 28418382
    383108 5n8p:D (2.7) BS14 CA ? GO:0005509 ... P35828 28418382
    383109 5n8p:D (2.7) BS15 CA ? GO:0005509 ... P35828 28418382
    383110 5n8p:D (2.7) BS16 CA ? GO:0005509 ... P35828 28418382
    383111 5n8p:D (2.7) BS17 CA ? GO:0005509 ... P35828 28418382
    383112 5n8p:E (2.7) BS01 CA ? GO:0005509 ... P35828 28418382
    383113 5n8p:E (2.7) BS02 CA ? GO:0005509 ... P35828 28418382
    383114 5n8p:E (2.7) BS03 CA ? GO:0005509 ... P35828 28418382
    383115 5n8p:E (2.7) BS04 CA ? GO:0005509 ... P35828 28418382
    383116 5n8p:E (2.7) BS05 CA ? GO:0005509 ... P35828 28418382
    383117 5n8p:E (2.7) BS06 CA ? GO:0005509 ... P35828 28418382
    383118 5n8p:E (2.7) BS07 CA ? GO:0005509 ... P35828 28418382
    383119 5n8p:E (2.7) BS08 CA ? GO:0005509 ... P35828 28418382
    383120 5n8p:E (2.7) BS09 CA ? GO:0005509 ... P35828 28418382
    383121 5n8p:E (2.7) BS10 CA ? GO:0005509 ... P35828 28418382
    383122 5n8p:E (2.7) BS11 CA ? GO:0005509 ... P35828 28418382
    383123 5n8p:E (2.7) BS12 CA ? GO:0005509 ... P35828 28418382
    383124 5n8p:E (2.7) BS13 CA ? GO:0005509 ... P35828 28418382
    383125 5n8p:E (2.7) BS14 CA ? GO:0005509 ... P35828 28418382
    383126 5n8p:E (2.7) BS15 CA ? GO:0005509 ... P35828 28418382
    383127 5n8p:E (2.7) BS16 CA ? GO:0005509 ... P35828 28418382
    383128 5n8p:E (2.7) BS17 CA ? GO:0005509 ... P35828 28418382
    383129 5n8p:E (2.7) BS18 CA ? GO:0005509 ... P35828 28418382
    383130 5n8p:F (2.7) BS01 CA ? GO:0005509 ... P35828 28418382
    383131 5n8p:F (2.7) BS02 CA ? GO:0005509 ... P35828 28418382
    383132 5n8p:F (2.7) BS03 CA ? GO:0005509 ... P35828 28418382
    383133 5n8p:F (2.7) BS04 CA ? GO:0005509 ... P35828 28418382
    383134 5n8p:F (2.7) BS05 CA ? GO:0005509 ... P35828 28418382
    383135 5n8p:F (2.7) BS06 CA ? GO:0005509 ... P35828 28418382
    383136 5n8p:F (2.7) BS07 CA ? GO:0005509 ... P35828 28418382
    383137 5n8p:F (2.7) BS08 CA ? GO:0005509 ... P35828 28418382
    383138 5n8p:F (2.7) BS09 CA ? GO:0005509 ... P35828 28418382
    383139 5n8p:F (2.7) BS10 CA ? GO:0005509 ... P35828 28418382
    383140 5n8p:F (2.7) BS11 CA ? GO:0005509 ... P35828 28418382
    383141 5n8p:F (2.7) BS12 CA ? GO:0005509 ... P35828 28418382
    383142 5n8p:F (2.7) BS13 CA ? GO:0005509 ... P35828 28418382
    383143 5n8p:F (2.7) BS14 CA ? GO:0005509 ... P35828 28418382
    383144 5n8p:F (2.7) BS15 CA ? GO:0005509 ... P35828 28418382
    383145 5n8p:F (2.7) BS16 CA ? GO:0005509 ... P35828 28418382
    383146 5n8p:F (2.7) BS17 CA ? GO:0005509 ... P35828 28418382
    383147 5n8p:F (2.7) BS18 CA ? GO:0005509 ... P35828 28418382
    383148 5n8r:A (2.2) BS01 dna 3.6.4.13 GO:0002151 ... Q8SWT2 29429875
    383149 5n8r:B (2.2) BS01 dna 3.6.4.13 GO:0002151 ... Q8SWT2 29429875
    383150 5n8s:A (2.88) BS01 dna 3.6.4.13 GO:0002151 ... Q8SWT2 29429875
    383151 5n8s:B (2.88) BS01 dna 3.6.4.13 GO:0002151 ... Q8SWT2 29429875
    383152 5n8t:A (1.61) BS01 peptide ? GO:0009374 ... P22629 28935886
    383153 5n8u:A (2.62) BS01 dna 3.6.4.13 GO:0002151 ... Q8SWT2 N/A
    383154 5n8u:B (2.62) BS01 dna 3.6.4.13 GO:0002151 ... Q8SWT2 N/A
    383155 5n8v:A (1.55) BS01 KZZ ? GO:0005778 ... Q8IEW2 28360328 MOAD: Ki=0.207uM
    383156 5n8v:B (1.55) BS01 KZZ ? GO:0005778 ... Q8IEW2 28360328 MOAD: Ki=0.207uM
    383157 5n8v:D (1.55) BS01 KZZ ? GO:0005778 ... Q8IEW2 28360328 MOAD: Ki=0.207uM
    383158 5n8v:F (1.55) BS01 KZZ ? GO:0005778 ... Q8IEW2 28360328 MOAD: Ki=0.207uM
    383159 5n8w:A (1.1) BS01 peptide ? GO:0009374 ... P22629 28935886
    383160 5n8w:B (1.1) BS01 peptide ? GO:0009374 ... P22629 28935886
    383161 5n8z:A (3.477) BS01 dna 3.6.4.13 GO:0002151 ... Q8SWT2 N/A
    383162 5n8z:B (3.477) BS01 dna 3.6.4.13 GO:0002151 ... Q8SWT2 N/A
    383163 5n90:A (3.069) BS01 dna 3.6.4.13 GO:0002151 ... Q8SWT2 29429875
    383164 5n90:B (3.069) BS01 dna 3.6.4.13 GO:0002151 ... Q8SWT2 29429875
    383165 5n91:A (1.49) BS01 peptide ? N/A Q8N8S7 33184177
    383166 5n91:A (1.49) BS02 peptide ? N/A Q8N8S7 33184177
    383167 5n91:B (1.49) BS01 peptide ? N/A Q8N8S7 33184177
    383168 5n93:A (2.1) BS01 8QE 2.7.12.1 GO:0004672 ... P33981 28539250 MOAD: Kd=2.2nM
    BindingDB: IC50=6.4nM
    383169 5n94:A (2.428) BS01 rna 3.6.4.13 GO:0002151 ... Q8SWT2 29429875
    383170 5n94:B (2.428) BS01 rna 3.6.4.13 GO:0002151 ... Q8SWT2 29429875
    383171 5n95:A (2.6) BS01 3PO 2.7.7.48
    3.4.22.28
    3.4.22.46
    3.6.1.15
    GO:0003723 ... P03311 28460010
    383172 5n96:A (2.716) BS01 dna 3.6.4.13 GO:0002151 ... Q8SWT2 29429875
    383173 5n96:B (2.716) BS01 dna 3.6.4.13 GO:0002151 ... Q8SWT2 29429875
    383174 5n97:A (7.4) BS01 CA ? GO:0005509 ... A0A0H3C8J1 28418382
    383175 5n97:A (7.4) BS02 CA ? GO:0005509 ... A0A0H3C8J1 28418382
    383176 5n97:A (7.4) BS03 CA ? GO:0005509 ... A0A0H3C8J1 28418382
    383177 5n97:A (7.4) BS04 CA ? GO:0005509 ... A0A0H3C8J1 28418382
    383178 5n97:A (7.4) BS05 CA ? GO:0005509 ... A0A0H3C8J1 28418382
    383179 5n97:A (7.4) BS06 CA ? GO:0005509 ... A0A0H3C8J1 28418382
    383180 5n97:A (7.4) BS07 CA ? GO:0005509 ... A0A0H3C8J1 28418382
    383181 5n97:A (7.4) BS08 CA ? GO:0005509 ... A0A0H3C8J1 28418382
    383182 5n97:A (7.4) BS09 CA ? GO:0005509 ... A0A0H3C8J1 28418382
    383183 5n97:A (7.4) BS10 CA ? GO:0005509 ... A0A0H3C8J1 28418382
    383184 5n97:A (7.4) BS11 CA ? GO:0005509 ... A0A0H3C8J1 28418382
    383185 5n97:A (7.4) BS12 CA ? GO:0005509 ... A0A0H3C8J1 28418382
    383186 5n97:A (7.4) BS13 CA ? GO:0005509 ... A0A0H3C8J1 28418382
    383187 5n97:A (7.4) BS14 CA ? GO:0005509 ... A0A0H3C8J1 28418382
    383188 5n97:A (7.4) BS15 CA ? GO:0005509 ... A0A0H3C8J1 28418382
    383189 5n97:A (7.4) BS16 CA ? GO:0005509 ... A0A0H3C8J1 28418382
    383190 5n97:A (7.4) BS17 CA ? GO:0005509 ... A0A0H3C8J1 28418382
    383191 5n97:A (7.4) BS18 CA ? GO:0005509 ... A0A0H3C8J1 28418382
    383192 5n97:A (7.4) BS19 CA ? GO:0005509 ... A0A0H3C8J1 28418382
    383193 5n97:B (7.4) BS01 CA ? GO:0005509 ... A0A0H3C8J1 28418382
    383194 5n97:B (7.4) BS02 CA ? GO:0005509 ... A0A0H3C8J1 28418382
    383195 5n97:B (7.4) BS03 CA ? GO:0005509 ... A0A0H3C8J1 28418382
    383196 5n97:B (7.4) BS04 CA ? GO:0005509 ... A0A0H3C8J1 28418382
    383197 5n97:B (7.4) BS05 CA ? GO:0005509 ... A0A0H3C8J1 28418382
    383198 5n97:B (7.4) BS06 CA ? GO:0005509 ... A0A0H3C8J1 28418382
    383199 5n97:B (7.4) BS07 CA ? GO:0005509 ... A0A0H3C8J1 28418382
    383200 5n97:B (7.4) BS08 CA ? GO:0005509 ... A0A0H3C8J1 28418382

    Reference:
  • Chengxin Zhang, Xi Zhang, Lydia Freddolino, and Yang Zhang. BioLiP2: an updated structure database for biologically relevent ligand-protein interactions, Nucleic Acids Research, gkad630 (2023).
  • Jianyi Yang, Ambrish Roy, and Yang Zhang. BioLiP: a semi-manually curated database for biologically relevant ligand-protein interactions, Nucleic Acids Research, 41: D1096-D1103 (2013) (download the PDF file).