SEQ2FUN

BioLiP
Download all results in tab-seperated text for 942758 receptor-ligand interactions, whose format is explained at readme.txt.
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    # PDB
    (Resolution Å)
    Site # Ligand EC number GO terms UniProt PubMed Binding
    affinity
    386001 5nmp:H (2.65) BS01 MN ? GO:0004061 ... Q8XYC3 30166577
    386002 5nmp:I (2.65) BS01 MN ? GO:0004061 ... Q8XYC3 30166577
    386003 5nmp:J (2.65) BS01 MN ? GO:0004061 ... Q8XYC3 30166577
    386004 5nmr:A (2.1) BS01 CA ? GO:0001503 ... Q6PHU5 29167428
    386005 5nmr:A (2.1) BS02 CA ? GO:0001503 ... Q6PHU5 29167428
    386006 5nmw:A (1.89) BS01 FAD 1.-.-.- GO:0000166 ... L0N8S9 29717713
    386007 5nmw:B (1.89) BS01 FAD 1.-.-.- GO:0000166 ... L0N8S9 29717713
    386008 5nmw:C (1.89) BS01 FAD 1.-.-.- GO:0000166 ... L0N8S9 29717713
    386009 5nmw:D (1.89) BS01 FAD 1.-.-.- GO:0000166 ... L0N8S9 29717713
    386010 5nmx:A (1.6) BS01 FAD 1.-.-.- GO:0000166 ... L0N8S9 29717713
    386011 5nmx:A (1.6) BS02 NAP 1.-.-.- GO:0000166 ... L0N8S9 29717713
    386012 5nmx:B (1.6) BS01 FAD 1.-.-.- GO:0000166 ... L0N8S9 29717713
    386013 5nmx:B (1.6) BS02 NAP 1.-.-.- GO:0000166 ... L0N8S9 29717713
    386014 5nmx:C (1.6) BS01 FAD 1.-.-.- GO:0000166 ... L0N8S9 29717713
    386015 5nmx:C (1.6) BS02 NAP 1.-.-.- GO:0000166 ... L0N8S9 29717713
    386016 5nmx:D (1.6) BS01 FAD 1.-.-.- GO:0000166 ... L0N8S9 29717713
    386017 5nmx:D (1.6) BS02 NAP 1.-.-.- GO:0000166 ... L0N8S9 29717713
    386018 5nmy:A (-1.00) BS01 ZN 3.4.24.75 N/A P10547 30018958
    386019 5nn0:A (2.1) BS01 FUC 3.1.1.8 GO:0001540 ... P06276 29227101
    386020 5nn0:A (2.1) BS02 FUC 3.1.1.8 GO:0001540 ... P06276 29227101
    386021 5nn0:A (2.1) BS03 92H 3.1.1.8 GO:0001540 ... P06276 29227101 MOAD: Kd=11.1pM
    BindingDB: IC50=1.0nM
    386022 5nn0:A (2.1) BS04 92H 3.1.1.8 GO:0001540 ... P06276 29227101 MOAD: Kd=11.1pM
    BindingDB: IC50=1.0nM
    386023 5nn2:A (1.81) BS01 Z24 2.7.11.21 N/A P53350 N/A
    386024 5nn4:A (1.83) BS01 SC2 3.2.1.20 GO:0000023 ... P10253 29061980 MOAD: Kd=11.57mM
    386025 5nn4:A (1.83) BS02 SC2 3.2.1.20 GO:0000023 ... P10253 29061980 MOAD: Kd=11.57mM
    386026 5nn5:A (2.0) BS01 NOJ 3.2.1.20 GO:0000023 ... P10253 29061980 MOAD: Ki=3.4uM
    386027 5nn6:A (2.0) BS01 MIG 3.2.1.20 GO:0000023 ... P10253 29061980 MOAD: Ki=3uM
    BindingDB: IC50=2000nM
    386028 5nn8:A (2.45) BS01 AC1 3.2.1.20 GO:0000023 ... P10253 29061980
    386029 5nn8:A (2.45) BS02 AC1 3.2.1.20 GO:0000023 ... P10253 29061980
    386030 5nn9:A (2.3) BS01 CA 3.2.1.18 GO:0004308 ... P03472 1920429
    386031 5nna:A (1.5) BS01 BZM ? GO:0004061 ... A0P0F0 30166577
    386032 5nna:A (1.5) BS02 MN ? GO:0004061 ... A0P0F0 30166577
    386033 5nna:B (1.5) BS01 BZM ? GO:0004061 ... A0P0F0 30166577
    386034 5nna:B (1.5) BS02 MN ? GO:0004061 ... A0P0F0 30166577
    386035 5nna:C (1.5) BS01 BZM ? GO:0004061 ... A0P0F0 30166577
    386036 5nna:C (1.5) BS02 MN ? GO:0004061 ... A0P0F0 30166577
    386037 5nna:D (1.5) BS01 BZM ? GO:0004061 ... A0P0F0 30166577
    386038 5nna:D (1.5) BS02 MN ? GO:0004061 ... A0P0F0 30166577
    386039 5nnb:A (1.8) BS01 MN ? GO:0004061 ... A0P0F0 30166577
    386040 5nnb:A (1.8) BS02 92K ? GO:0004061 ... A0P0F0 30166577
    386041 5nnb:A (1.8) BS03 92K ? GO:0004061 ... A0P0F0 30166577
    386042 5nnb:B (1.8) BS01 92K ? GO:0004061 ... A0P0F0 30166577
    386043 5nnb:B (1.8) BS02 MN ? GO:0004061 ... A0P0F0 30166577
    386044 5nnb:B (1.8) BS03 92K ? GO:0004061 ... A0P0F0 30166577
    386045 5nnb:C (1.8) BS01 MN ? GO:0004061 ... A0P0F0 30166577
    386046 5nnb:C (1.8) BS02 92K ? GO:0004061 ... A0P0F0 30166577
    386047 5nnb:D (1.8) BS01 MN ? GO:0004061 ... A0P0F0 30166577
    386048 5nnb:D (1.8) BS02 92K ? GO:0004061 ... A0P0F0 30166577
    386049 5nnc:A (2.22) BS01 peptide ? N/A O60885 30554943
    386050 5nnc:A (2.22) BS02 peptide ? N/A O60885 30554943
    386051 5nnc:B (2.22) BS01 peptide ? N/A O60885 30554943
    386052 5nnd:A (1.82) BS01 peptide ? N/A O60885 30554943
    386053 5nnd:A (1.82) BS02 peptide ? N/A O60885 30554943
    386054 5nnd:B (1.82) BS01 peptide ? N/A O60885 30554943
    386055 5nne:A (1.15) BS01 peptide ? N/A O60885 30554943
    386056 5nnf:A (1.15) BS01 peptide ? N/A O60885 30554943
    386057 5nng:A (1.2) BS01 peptide ? N/A O60885 30554943
    386058 5nnm:A (1.9) BS01 CO3 ? GO:0042742 ... P49913 29133814
    386059 5nno:A (2.5) BS01 NAD ? GO:0000166 ... C9ZQX6 29425238
    386060 5nno:A (2.5) BS02 92N ? GO:0000166 ... C9ZQX6 29425238
    386061 5nno:B (2.5) BS01 NAD ? GO:0000166 ... C9ZQX6 29425238
    386062 5nno:B (2.5) BS02 92N ? GO:0000166 ... C9ZQX6 29425238
    386063 5nnp:B (2.602) BS01 peptide ? GO:0004596 ... G0SEE8 28585574
    386064 5nnp:B (2.602) BS02 CMC ? GO:0004596 ... G0SEE8 28585574
    386065 5nnp:F (2.602) BS01 peptide ? GO:0004596 ... G0SEE8 28585574
    386066 5nnp:F (2.602) BS02 CMC ? GO:0004596 ... G0SEE8 28585574
    386067 5nns:A (2.1) BS01 CU 3.2.1.4 GO:0004497 ... W4KMP1 29660793
    386068 5nns:B (2.1) BS01 CU 3.2.1.4 GO:0004497 ... W4KMP1 29660793
    386069 5nnt:A (2.209) BS01 DPV ? GO:0042742 ... P49913 29133814
    386070 5nnt:B (2.209) BS01 DPV ? GO:0042742 ... P49913 29133814
    386071 5nnu:A (2.97) BS01 dna 3.2.2.27 GO:0004844 ... F5HFA1 29596604
    386072 5nnu:A (2.97) BS02 dna 3.2.2.27 GO:0004844 ... F5HFA1 29596604
    386073 5nnu:A (2.97) BS03 dna 3.2.2.27 GO:0004844 ... F5HFA1 29596604
    386074 5nnu:A (2.97) BS04 dna 3.2.2.27 GO:0004844 ... F5HFA1 29596604
    386075 5nnu:B (2.97) BS01 dna 3.2.2.27 GO:0004844 ... F5HFA1 29596604
    386076 5nnu:B (2.97) BS02 dna 3.2.2.27 GO:0004844 ... F5HFA1 29596604
    386077 5nnu:B (2.97) BS03 dna 3.2.2.27 GO:0004844 ... F5HFA1 29596604
    386078 5nnu:B (2.97) BS04 dna 3.2.2.27 GO:0004844 ... F5HFA1 29596604
    386079 5nnu:D (2.97) BS01 dna 3.2.2.27 GO:0004844 ... F5HFA1 29596604
    386080 5nnu:D (2.97) BS02 dna 3.2.2.27 GO:0004844 ... F5HFA1 29596604
    386081 5nnu:D (2.97) BS03 dna 3.2.2.27 GO:0004844 ... F5HFA1 29596604
    386082 5nnu:E (2.97) BS01 dna 3.2.2.27 GO:0004844 ... F5HFA1 29596604
    386083 5nnu:E (2.97) BS02 dna 3.2.2.27 GO:0004844 ... F5HFA1 29596604
    386084 5nnu:E (2.97) BS03 dna 3.2.2.27 GO:0004844 ... F5HFA1 29596604
    386085 5nnw:A (1.54) BS01 MG ? GO:0005576 ... Q9SPD4 29242345
    386086 5nnw:B (1.54) BS01 MG ? GO:0005576 ... Q9SPD4 29242345
    386087 5nnw:C (1.54) BS01 MG ? GO:0005576 ... Q9SPD4 29242345
    386088 5nnw:D (1.54) BS01 MG ? GO:0005576 ... Q9SPD4 29242345
    386089 5nnw:D (1.54) BS02 GCS ? GO:0005576 ... Q9SPD4 29242345
    386090 5nnx:A (3.29) BS01 dna ? GO:0003700 ... P28347 N/A
    386091 5nnx:A (3.29) BS02 dna ? GO:0003700 ... P28347 N/A
    386092 5no1:A (2.6) BS01 dna 2.7.7.-
    2.7.7.49
    2.7.7.7
    3.1.-.-
    3.1.26.4
    3.4.23.-
    GO:0003676 ... P14350 28737946
    386093 5no1:A (2.6) BS02 dna 2.7.7.-
    2.7.7.49
    2.7.7.7
    3.1.-.-
    3.1.26.4
    3.4.23.-
    GO:0003676 ... P14350 28737946
    386094 5no1:A (2.6) BS03 MG 2.7.7.-
    2.7.7.49
    2.7.7.7
    3.1.-.-
    3.1.26.4
    3.4.23.-
    GO:0003676 ... P14350 28737946
    386095 5no1:A (2.6) BS04 MG 2.7.7.-
    2.7.7.49
    2.7.7.7
    3.1.-.-
    3.1.26.4
    3.4.23.-
    GO:0003676 ... P14350 28737946
    386096 5no1:A (2.6) BS05 XZ4 2.7.7.-
    2.7.7.49
    2.7.7.7
    3.1.-.-
    3.1.26.4
    3.4.23.-
    GO:0003676 ... P14350 28737946
    386097 5no1:A (2.6) BS06 ZN 2.7.7.-
    2.7.7.49
    2.7.7.7
    3.1.-.-
    3.1.26.4
    3.4.23.-
    GO:0003676 ... P14350 28737946
    386098 5no1:B (2.6) BS01 MG 2.7.7.-
    2.7.7.49
    2.7.7.7
    3.1.-.-
    3.1.26.4
    3.4.23.-
    GO:0003676 ... P14350 28737946
    386099 5no2:D (5.16) BS01 rna ? GO:0000028 ... P0A7V8 28482099
    386100 5no2:E (5.16) BS01 rna ? GO:0000028 ... P0A7W1 28482099
    386101 5no2:F (5.16) BS01 rna ? GO:0003735 ... P02358 28482099
    386102 5no2:G (5.16) BS01 rna ? GO:0003723 ... P02359 28482099
    386103 5no2:H (5.16) BS01 rna ? GO:0000028 ... P0A7W7 28482099
    386104 5no2:I (5.16) BS01 rna ? GO:0000049 ... P0A7X3 28482099
    386105 5no2:J (5.16) BS01 rna ? GO:0000049 ... P0A7R5 28482099
    386106 5no2:K (5.16) BS01 rna ? GO:0002181 ... P0A7R9 28482099
    386107 5no2:M (5.16) BS01 rna ? GO:0000049 ... P0A7S9 28482099
    386108 5no2:M (5.16) BS02 MG ? GO:0000049 ... P0A7S9 28482099
    386109 5no2:N (5.16) BS01 rna ? GO:0000028 ... P0AG59 28482099
    386110 5no2:O (5.16) BS01 rna ? GO:0000028 ... P0ADZ4 28482099
    386111 5no2:P (5.16) BS01 rna ? GO:0000028 ... P0A7T3 28482099
    386112 5no2:Q (5.16) BS01 rna ? GO:0000028 ... P0AG63 28482099
    386113 5no2:Q (5.16) BS02 peptide ? GO:0000028 ... P0AG63 28482099
    386114 5no2:R (5.16) BS01 rna ? GO:0003735 ... P0A7T7 28482099
    386115 5no2:S (5.16) BS01 rna ? GO:0003723 ... P0A7U3 28482099
    386116 5no2:T (5.16) BS01 rna ? GO:0000028 ... P0A7U7 28482099
    386117 5no2:Z (5.16) BS01 rna 3.6.1.- GO:0003924 ... P39286 28482099
    386118 5no2:Z (5.16) BS02 ZN 3.6.1.- GO:0003924 ... P39286 28482099
    386119 5no2:Z (5.16) BS03 GNP 3.6.1.- GO:0003924 ... P39286 28482099
    386120 5no2:Z (5.16) BS04 MG 3.6.1.- GO:0003924 ... P39286 28482099
    386121 5no3:B (5.16) BS01 rna ? GO:0000028 ... P0A7V0 28482099
    386122 5no3:B (5.16) BS02 ZN ? GO:0000028 ... P0A7V0 28482099
    386123 5no3:D (5.16) BS01 rna ? GO:0000028 ... P0A7V8 28482099
    386124 5no3:E (5.16) BS01 rna ? GO:0000028 ... P0A7W1 28482099
    386125 5no3:F (5.16) BS01 rna ? GO:0003735 ... P02358 28482099
    386126 5no3:G (5.16) BS01 rna ? GO:0003723 ... P02359 28482099
    386127 5no3:H (5.16) BS01 rna ? GO:0000028 ... P0A7W7 28482099
    386128 5no3:I (5.16) BS01 rna ? GO:0000049 ... P0A7X3 28482099
    386129 5no3:J (5.16) BS01 rna ? GO:0000049 ... P0A7R5 28482099
    386130 5no3:K (5.16) BS01 rna ? GO:0002181 ... P0A7R9 28482099
    386131 5no3:M (5.16) BS01 rna ? GO:0000049 ... P0A7S9 28482099
    386132 5no3:M (5.16) BS02 MG ? GO:0000049 ... P0A7S9 28482099
    386133 5no3:N (5.16) BS01 rna ? GO:0000028 ... P0AG59 28482099
    386134 5no3:O (5.16) BS01 rna ? GO:0000028 ... P0ADZ4 28482099
    386135 5no3:P (5.16) BS01 rna ? GO:0000028 ... P0A7T3 28482099
    386136 5no3:Q (5.16) BS01 rna ? GO:0000028 ... P0AG63 28482099
    386137 5no3:Q (5.16) BS02 peptide ? GO:0000028 ... P0AG63 28482099
    386138 5no3:R (5.16) BS01 rna ? GO:0003735 ... P0A7T7 28482099
    386139 5no3:S (5.16) BS01 rna ? GO:0003723 ... P0A7U3 28482099
    386140 5no3:T (5.16) BS01 rna ? GO:0000028 ... P0A7U7 28482099
    386141 5no3:Z (5.16) BS01 rna 3.6.1.- GO:0003924 ... P39286 28482099
    386142 5no3:Z (5.16) BS02 ZN 3.6.1.- GO:0003924 ... P39286 28482099
    386143 5no3:Z (5.16) BS03 GNP 3.6.1.- GO:0003924 ... P39286 28482099
    386144 5no3:Z (5.16) BS04 MG 3.6.1.- GO:0003924 ... P39286 28482099
    386145 5no4:C (5.16) BS01 rna ? GO:0003676 ... P0A7V3 28482099
    386146 5no4:D (5.16) BS01 rna ? GO:0000028 ... P0A7V8 28482099
    386147 5no4:E (5.16) BS01 rna ? GO:0000028 ... P0A7W1 28482099
    386148 5no4:F (5.16) BS01 rna ? GO:0003735 ... P02358 28482099
    386149 5no4:G (5.16) BS01 rna ? GO:0003723 ... P02359 28482099
    386150 5no4:H (5.16) BS01 rna ? GO:0000028 ... P0A7W7 28482099
    386151 5no4:I (5.16) BS01 rna ? GO:0000049 ... P0A7X3 28482099
    386152 5no4:J (5.16) BS01 rna ? GO:0000049 ... P0A7R5 28482099
    386153 5no4:K (5.16) BS01 rna ? GO:0002181 ... P0A7R9 28482099
    386154 5no4:M (5.16) BS01 rna ? GO:0000049 ... P0A7S9 28482099
    386155 5no4:M (5.16) BS02 MG ? GO:0000049 ... P0A7S9 28482099
    386156 5no4:N (5.16) BS01 rna ? GO:0000028 ... P0AG59 28482099
    386157 5no4:O (5.16) BS01 rna ? GO:0000028 ... P0ADZ4 28482099
    386158 5no4:P (5.16) BS01 rna ? GO:0000028 ... P0A7T3 28482099
    386159 5no4:Q (5.16) BS01 rna ? GO:0000028 ... P0AG63 28482099
    386160 5no4:Q (5.16) BS02 peptide ? GO:0000028 ... P0AG63 28482099
    386161 5no4:R (5.16) BS01 rna ? GO:0003735 ... P0A7T7 28482099
    386162 5no4:S (5.16) BS01 rna ? GO:0003723 ... P0A7U3 28482099
    386163 5no4:T (5.16) BS01 rna ? GO:0000028 ... P0A7U7 28482099
    386164 5no4:Z (5.16) BS01 rna 3.6.1.- GO:0003924 ... P39286 28482099
    386165 5no4:Z (5.16) BS02 ZN 3.6.1.- GO:0003924 ... P39286 28482099
    386166 5no4:Z (5.16) BS03 GNP 3.6.1.- GO:0003924 ... P39286 28482099
    386167 5no4:Z (5.16) BS04 MG 3.6.1.- GO:0003924 ... P39286 28482099
    386168 5no6:A (2.88) BS01 dna ? GO:0000981 ... Q92826 N/A
    386169 5no6:A (2.88) BS02 dna ? GO:0000981 ... Q92826 N/A
    386170 5no6:B (2.88) BS01 dna ? GO:0000981 ... Q92826 N/A
    386171 5no6:B (2.88) BS02 dna ? GO:0000981 ... Q92826 N/A
    386172 5no6:I (2.88) BS01 dna ? GO:0003700 ... Q15561 N/A
    386173 5no6:I (2.88) BS02 dna ? GO:0003700 ... Q15561 N/A
    386174 5no6:N (2.88) BS01 dna ? GO:0003700 ... Q15561 N/A
    386175 5no6:N (2.88) BS02 dna ? GO:0003700 ... Q15561 N/A
    386176 5no7:A (3.01) BS01 BMA ? N/A A0A2I6QB00 29377002
    386177 5no9:A (1.75) BS01 MG ? GO:0005576 ... Q9SPD4 29242345
    386178 5no9:B (1.75) BS01 MG ? GO:0005576 ... Q9SPD4 29242345
    386179 5no9:C (1.75) BS01 MG ? GO:0005576 ... Q9SPD4 29242345
    386180 5no9:D (1.75) BS01 MG ? GO:0005576 ... Q9SPD4 29242345
    386181 5no9:D (1.75) BS02 95Z ? GO:0005576 ... Q9SPD4 29242345
    386182 5nob:A (1.85) BS01 92T 2.4.2.-
    2.4.2.30
    GO:0003950 ... Q9H2K2 29155568 MOAD: ic50=0.0063uM
    BindingDB: IC50=6.3nM
    386183 5nob:A (1.85) BS02 ZN 2.4.2.-
    2.4.2.30
    GO:0003950 ... Q9H2K2 29155568
    386184 5nob:B (1.85) BS01 92T 2.4.2.-
    2.4.2.30
    GO:0003950 ... Q9H2K2 29155568 MOAD: ic50=0.0063uM
    BindingDB: IC50=6.3nM
    386185 5nob:B (1.85) BS02 ZN 2.4.2.-
    2.4.2.30
    GO:0003950 ... Q9H2K2 29155568
    386186 5nof:A (2.42) BS01 ZN 2.4.2.18 GO:0000162 ... Q9YGB4 28781961
    386187 5nof:A (2.42) BS02 ZN 2.4.2.18 GO:0000162 ... Q9YGB4 28781961
    386188 5nof:B (2.42) BS01 ZN 2.4.2.18 GO:0000162 ... Q9YGB4 28781961
    386189 5nof:B (2.42) BS02 ZN 2.4.2.18 GO:0000162 ... Q9YGB4 28781961
    386190 5nog:A (11.0) BS01 ADP 3.6.4.- GO:0001725 ... P68137 28607071
    386191 5nog:A (11.0) BS02 MG 3.6.4.- GO:0001725 ... P68137 28607071
    386192 5nog:B (11.0) BS01 ADP 3.6.4.- GO:0001725 ... P68137 28607071
    386193 5nog:B (11.0) BS02 MG 3.6.4.- GO:0001725 ... P68137 28607071
    386194 5nog:C (11.0) BS01 ADP 3.6.4.- GO:0001725 ... P68137 28607071
    386195 5nog:D (11.0) BS01 ADP 3.6.4.- GO:0001725 ... P68137 28607071
    386196 5nog:D (11.0) BS02 MG 3.6.4.- GO:0001725 ... P68137 28607071
    386197 5nog:E (11.0) BS01 ADP 3.6.4.- GO:0001725 ... P68137 28607071
    386198 5nog:E (11.0) BS02 MG 3.6.4.- GO:0001725 ... P68137 28607071
    386199 5noj:A (11.0) BS01 ADP 3.6.4.- GO:0001725 ... P68137 28607071
    386200 5noj:B (11.0) BS01 ADP 3.6.4.- GO:0001725 ... P68137 28607071

    Reference:
  • Chengxin Zhang, Xi Zhang, Lydia Freddolino, and Yang Zhang. BioLiP2: an updated structure database for biologically relevent ligand-protein interactions, Nucleic Acids Research, gkad630 (2023).
  • Jianyi Yang, Ambrish Roy, and Yang Zhang. BioLiP: a semi-manually curated database for biologically relevant ligand-protein interactions, Nucleic Acids Research, 41: D1096-D1103 (2013) (download the PDF file).