SEQ2FUN

BioLiP
Download all results in tab-seperated text for 942758 receptor-ligand interactions, whose format is explained at readme.txt.
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    # PDB
    (Resolution Å)
    Site # Ligand EC number GO terms UniProt PubMed Binding
    affinity
    386801 5nsx:B (1.8) BS02 97K 2.4.2.-
    2.4.2.30
    GO:0003950 ... Q9H2K2 29374194 MOAD: ic50=400nM
    386802 5nt0:A (1.75) BS01 ZN 2.4.2.-
    2.4.2.30
    GO:0003950 ... Q9H2K2 29374194
    386803 5nt0:A (1.75) BS02 97H 2.4.2.-
    2.4.2.30
    GO:0003950 ... Q9H2K2 29374194 MOAD: ic50=280nM
    386804 5nt0:B (1.75) BS01 ZN 2.4.2.-
    2.4.2.30
    GO:0003950 ... Q9H2K2 29374194
    386805 5nt0:B (1.75) BS02 97H 2.4.2.-
    2.4.2.30
    GO:0003950 ... Q9H2K2 29374194 MOAD: ic50=280nM
    386806 5nt4:A (1.9) BS01 ZN 2.4.2.-
    2.4.2.30
    GO:0003950 ... Q9H2K2 29374194
    386807 5nt4:A (1.9) BS02 97Z 2.4.2.-
    2.4.2.30
    GO:0003950 ... Q9H2K2 29374194 MOAD: ic50=17nM
    386808 5nt4:B (1.9) BS01 ZN 2.4.2.-
    2.4.2.30
    GO:0003950 ... Q9H2K2 29374194
    386809 5nt4:B (1.9) BS02 97Z 2.4.2.-
    2.4.2.30
    GO:0003950 ... Q9H2K2 29374194 MOAD: ic50=17nM
    386810 5ntc:A (2.25) BS01 6L7 2.1.1.319 GO:0016274 ... Q9WVG6 N/A
    386811 5ntc:B (2.25) BS01 6L7 2.1.1.319 GO:0016274 ... Q9WVG6 N/A
    386812 5ntc:C (2.25) BS01 DXE 2.1.1.319 GO:0016274 ... Q9WVG6 N/A
    386813 5ntc:C (2.25) BS02 6L7 2.1.1.319 GO:0016274 ... Q9WVG6 N/A
    386814 5ntc:D (2.25) BS01 6L7 2.1.1.319 GO:0016274 ... Q9WVG6 N/A
    386815 5ntd:A (2.3) BS01 MN ? GO:0004177 ... Q385B0 28815215
    386816 5ntd:A (2.3) BS02 MN ? GO:0004177 ... Q385B0 28815215
    386817 5ntd:A (2.3) BS03 BES ? GO:0004177 ... Q385B0 28815215
    386818 5ntd:A (2.3) BS04 BCT ? GO:0004177 ... Q385B0 28815215
    386819 5ntd:B (2.3) BS01 MN ? GO:0004177 ... Q385B0 28815215
    386820 5ntd:B (2.3) BS02 MN ? GO:0004177 ... Q385B0 28815215
    386821 5ntd:B (2.3) BS03 BES ? GO:0004177 ... Q385B0 28815215
    386822 5ntd:B (2.3) BS04 BCT ? GO:0004177 ... Q385B0 28815215
    386823 5ntd:C (2.3) BS01 MN ? GO:0004177 ... Q385B0 28815215
    386824 5ntd:C (2.3) BS02 MN ? GO:0004177 ... Q385B0 28815215
    386825 5ntd:C (2.3) BS03 BES ? GO:0004177 ... Q385B0 28815215
    386826 5ntd:C (2.3) BS04 BCT ? GO:0004177 ... Q385B0 28815215
    386827 5ntd:D (2.3) BS01 MN ? GO:0004177 ... Q385B0 28815215
    386828 5ntd:D (2.3) BS02 MN ? GO:0004177 ... Q385B0 28815215
    386829 5ntd:D (2.3) BS03 BES ? GO:0004177 ... Q385B0 28815215
    386830 5ntd:D (2.3) BS04 BCT ? GO:0004177 ... Q385B0 28815215
    386831 5ntd:E (2.3) BS01 MN ? GO:0004177 ... Q385B0 28815215
    386832 5ntd:E (2.3) BS02 MN ? GO:0004177 ... Q385B0 28815215
    386833 5ntd:E (2.3) BS03 BES ? GO:0004177 ... Q385B0 28815215
    386834 5ntd:E (2.3) BS04 BCT ? GO:0004177 ... Q385B0 28815215
    386835 5ntd:F (2.3) BS01 MN ? GO:0004177 ... Q385B0 28815215
    386836 5ntd:F (2.3) BS02 MN ? GO:0004177 ... Q385B0 28815215
    386837 5ntd:F (2.3) BS03 BES ? GO:0004177 ... Q385B0 28815215
    386838 5ntd:F (2.3) BS04 BCT ? GO:0004177 ... Q385B0 28815215
    386839 5ntd:G (2.3) BS01 MN ? GO:0004177 ... Q385B0 28815215
    386840 5ntd:G (2.3) BS02 MN ? GO:0004177 ... Q385B0 28815215
    386841 5ntd:G (2.3) BS03 BES ? GO:0004177 ... Q385B0 28815215
    386842 5ntd:G (2.3) BS04 BCT ? GO:0004177 ... Q385B0 28815215
    386843 5ntd:H (2.3) BS01 MN ? GO:0004177 ... Q385B0 28815215
    386844 5ntd:H (2.3) BS02 MN ? GO:0004177 ... Q385B0 28815215
    386845 5ntd:H (2.3) BS03 BES ? GO:0004177 ... Q385B0 28815215
    386846 5ntd:H (2.3) BS04 BCT ? GO:0004177 ... Q385B0 28815215
    386847 5ntd:I (2.3) BS01 MN ? GO:0004177 ... Q385B0 28815215
    386848 5ntd:I (2.3) BS02 MN ? GO:0004177 ... Q385B0 28815215
    386849 5ntd:I (2.3) BS03 BES ? GO:0004177 ... Q385B0 28815215
    386850 5ntd:I (2.3) BS04 BCT ? GO:0004177 ... Q385B0 28815215
    386851 5ntd:J (2.3) BS01 MN ? GO:0004177 ... Q385B0 28815215
    386852 5ntd:J (2.3) BS02 MN ? GO:0004177 ... Q385B0 28815215
    386853 5ntd:J (2.3) BS03 BES ? GO:0004177 ... Q385B0 28815215
    386854 5ntd:J (2.3) BS04 BCT ? GO:0004177 ... Q385B0 28815215
    386855 5ntd:K (2.3) BS01 MN ? GO:0004177 ... Q385B0 28815215
    386856 5ntd:K (2.3) BS02 MN ? GO:0004177 ... Q385B0 28815215
    386857 5ntd:K (2.3) BS03 BES ? GO:0004177 ... Q385B0 28815215
    386858 5ntd:K (2.3) BS04 BCT ? GO:0004177 ... Q385B0 28815215
    386859 5ntd:L (2.3) BS01 MN ? GO:0004177 ... Q385B0 28815215
    386860 5ntd:L (2.3) BS02 MN ? GO:0004177 ... Q385B0 28815215
    386861 5ntd:L (2.3) BS03 BES ? GO:0004177 ... Q385B0 28815215
    386862 5ntd:L (2.3) BS04 BCT ? GO:0004177 ... Q385B0 28815215
    386863 5ntg:A (2.32) BS01 MN ? GO:0004177 ... V5BWE3 28815215
    386864 5ntg:B (2.32) BS01 MN ? GO:0004177 ... V5BWE3 28815215
    386865 5nth:A (2.5) BS01 BCT 3.4.11.- GO:0004177 ... Q4QH17 28815215
    386866 5nth:A (2.5) BS02 MN 3.4.11.- GO:0004177 ... Q4QH17 28815215
    386867 5nth:A (2.5) BS03 MN 3.4.11.- GO:0004177 ... Q4QH17 28815215
    386868 5nth:A (2.5) BS04 BB2 3.4.11.- GO:0004177 ... Q4QH17 28815215
    386869 5nti:A (2.4) BS01 peptide ? GO:0003677 ... P51449 28590087
    386870 5nti:A (2.4) BS02 C3S ? GO:0003677 ... P51449 28590087
    386871 5nti:B (2.4) BS01 peptide ? GO:0003677 ... P51449 28590087
    386872 5nti:B (2.4) BS02 C3S ? GO:0003677 ... P51449 28590087
    386873 5nti:C (2.4) BS01 peptide ? GO:0003677 ... P51449 28590087
    386874 5nti:C (2.4) BS02 C3S ? GO:0003677 ... P51449 28590087
    386875 5nti:D (2.4) BS01 peptide ? GO:0003677 ... P51449 28590087
    386876 5nti:D (2.4) BS02 C3S ? GO:0003677 ... P51449 28590087
    386877 5ntj:A (1.56) BS01 peptide 2.7.11.11 GO:0000287 ... P25321 N/A
    386878 5ntk:A (1.9) BS01 99N ? GO:0003677 ... P51449 28590087 MOAD: ic50=9.7nM
    386879 5ntk:B (1.9) BS01 99N ? GO:0003677 ... P51449 28590087 MOAD: ic50=9.7nM
    386880 5ntn:A (1.9) BS01 peptide ? GO:0003677 ... P51449 28590087
    386881 5ntn:A (1.9) BS02 98H ? GO:0003677 ... P51449 28590087
    386882 5ntn:B (1.9) BS01 peptide ? GO:0003677 ... P51449 28590087
    386883 5ntn:B (1.9) BS02 peptide ? GO:0003677 ... P51449 28590087
    386884 5ntn:B (1.9) BS03 98H ? GO:0003677 ... P51449 28590087
    386885 5ntn:C (1.9) BS01 peptide ? GO:0003677 ... P51449 28590087
    386886 5ntn:C (1.9) BS02 98H ? GO:0003677 ... P51449 28590087
    386887 5ntn:D (1.9) BS01 peptide ? GO:0003677 ... P51449 28590087
    386888 5ntn:D (1.9) BS02 98H ? GO:0003677 ... P51449 28590087
    386889 5ntp:A (1.7) BS01 98E ? GO:0003677 ... P51449 28590087 MOAD: ic50=0.7nM
    386890 5ntq:A (2.26) BS01 444 ? GO:0003677 ... P51449 28590087 MOAD: ic50=33.8nM
    BindingDB: IC50=60nM, EC50=54nM, Ki=51nM
    386891 5ntq:B (2.26) BS01 444 ? GO:0003677 ... P51449 28590087 MOAD: ic50=33.8nM
    BindingDB: IC50=60nM, EC50=54nM, Ki=51nM
    386892 5ntt:A (2.75) BS01 SVE 2.7.12.1 GO:0004672 ... P33981 28726638 BindingDB: IC50=182nM
    386893 5ntw:A (1.64) BS01 peptide ? GO:0003677 ... P51449 28590087
    386894 5ntw:A (1.64) BS02 peptide ? GO:0003677 ... P51449 28590087
    386895 5ntw:A (1.64) BS03 98N ? GO:0003677 ... P51449 28590087 MOAD: ic50=0.6nM
    BindingDB: IC50=<100nM, Ki=<100nM
    386896 5ntw:B (1.64) BS01 peptide ? GO:0003677 ... P51449 28590087
    386897 5ntw:B (1.64) BS02 98N ? GO:0003677 ... P51449 28590087 MOAD: ic50=0.6nM
    BindingDB: IC50=<100nM, Ki=<100nM
    386898 5ntw:C (1.64) BS01 peptide ? GO:0003677 ... P51449 28590087
    386899 5ntw:C (1.64) BS02 98N ? GO:0003677 ... P51449 28590087 MOAD: ic50=0.6nM
    BindingDB: IC50=<100nM, Ki=<100nM
    386900 5ntw:D (1.64) BS01 peptide ? GO:0003677 ... P51449 28590087
    386901 5ntw:D (1.64) BS02 98N ? GO:0003677 ... P51449 28590087 MOAD: ic50=0.6nM
    BindingDB: IC50=<100nM, Ki=<100nM
    386902 5nu1:A (1.85) BS01 peptide ? GO:0003677 ... P51449 28590087
    386903 5nu1:A (1.85) BS02 8YB ? GO:0003677 ... P51449 28590087 MOAD: ic50=1nM
    BindingDB: IC50=10.0nM, EC50=8.0nM, Ki=40nM
    386904 5nu1:B (1.85) BS01 peptide ? GO:0003677 ... P51449 28590087
    386905 5nu1:B (1.85) BS02 8YB ? GO:0003677 ... P51449 28590087 MOAD: ic50=1nM
    BindingDB: IC50=10.0nM, EC50=8.0nM, Ki=40nM
    386906 5nu3:A (1.75) BS01 99E 2.3.1.-
    2.3.1.48
    N/A Q92793 28766825 MOAD: Kd=0.23uM
    386907 5nu3:A (1.75) BS02 BU3 2.3.1.-
    2.3.1.48
    N/A Q92793 28766825
    386908 5nu3:A (1.75) BS03 BU3 2.3.1.-
    2.3.1.48
    N/A Q92793 28766825
    386909 5nu3:A (1.75) BS04 BU3 2.3.1.-
    2.3.1.48
    N/A Q92793 28766825
    386910 5nu5:A (1.6) BS01 99E 2.3.1.-
    2.3.1.48
    N/A Q09472 28766825 MOAD: Kd=0.47uM
    386911 5nu5:B (1.6) BS01 99E 2.3.1.-
    2.3.1.48
    N/A Q09472 28766825 MOAD: Kd=0.47uM
    386912 5nu7:A (1.5) BS01 RTL ? GO:0001654 ... P02753 29414511
    386913 5nua:A (1.6) BS01 DAO ? GO:0001654 ... P02753 29414511
    386914 5nub:A (1.6) BS01 DAO ? GO:0001654 ... P02753 29414511
    386915 5nuc:A (2.1) BS01 CA 3.1.31.1 GO:0003676 ... P00644 8762134
    386916 5nuc:A (2.1) BS02 THP 3.1.31.1 GO:0003676 ... P00644 8762134
    386917 5nud:A (2.5) BS01 99K 2.7.10.1 GO:0004672 ... P22455 30108871
    386918 5nud:B (2.5) BS01 99K 2.7.10.1 GO:0004672 ... P22455 30108871
    386919 5nue:A (1.35) BS01 NAD 1.1.1.37 GO:0000325 ... P93819 29194485
    386920 5nue:B (1.35) BS01 NAD 1.1.1.37 GO:0000325 ... P93819 29194485
    386921 5nue:C (1.35) BS01 NAD 1.1.1.37 GO:0000325 ... P93819 29194485
    386922 5nuf:A (1.8) BS01 NAD 1.1.1.37 GO:0000325 ... P93819 29194485
    386923 5nuf:B (1.8) BS01 NAD 1.1.1.37 GO:0000325 ... P93819 29194485
    386924 5nuf:C (1.8) BS01 NAD 1.1.1.37 GO:0000325 ... P93819 29194485
    386925 5nug:A (3.8) BS01 ADP ? GO:0003723 ... Q14204 28602352
    386926 5nug:A (3.8) BS02 ATP ? GO:0003723 ... Q14204 28602352
    386927 5nug:A (3.8) BS03 MG ? GO:0003723 ... Q14204 28602352
    386928 5nug:A (3.8) BS04 ADP ? GO:0003723 ... Q14204 28602352
    386929 5nug:A (3.8) BS05 ADP ? GO:0003723 ... Q14204 28602352
    386930 5nug:B (3.8) BS01 ADP ? GO:0003723 ... Q14204 28602352
    386931 5nug:B (3.8) BS02 ATP ? GO:0003723 ... Q14204 28602352
    386932 5nug:B (3.8) BS03 MG ? GO:0003723 ... Q14204 28602352
    386933 5nug:B (3.8) BS04 ADP ? GO:0003723 ... Q14204 28602352
    386934 5nug:B (3.8) BS05 ADP ? GO:0003723 ... Q14204 28602352
    386935 5nui:B (2.5) BS01 peptide ? GO:0005525 ... Q5QGG3 28874665
    386936 5nuj:A (2.6) BS01 Z80 ? GO:0005515 ... P02754 29555509
    386937 5nuk:A (1.7) BS01 Z80 ? GO:0005515 ... P02754 29555509
    386938 5nul:A (1.6) BS01 FMN ? GO:0009055 ... P00322 9063874
    386939 5num:A (2.3) BS01 Z80 ? GO:0005515 ... P02754 29555509
    386940 5nun:A (1.95) BS01 Z80 ? GO:0005515 ... P02754 29555509
    386941 5nuo:A (3.2) BS01 C8E ? GO:0001530 ... P02931 29038444
    386942 5nuo:A (3.2) BS02 C8E ? GO:0001530 ... P02931 29038444
    386943 5nuo:A (3.2) BS03 C8E ? GO:0001530 ... P02931 29038444
    386944 5nuo:A (3.2) BS04 C8E ? GO:0001530 ... P02931 29038444
    386945 5nuo:B (3.2) BS01 C8E ? GO:0016020 ... A0A0W8AQT6 29038444
    386946 5nuo:C (3.2) BS01 C8E ? GO:0001530 ... P02931 29038444
    386947 5nuo:C (3.2) BS02 C8E ? GO:0001530 ... P02931 29038444
    386948 5nuo:C (3.2) BS03 C8E ? GO:0001530 ... P02931 29038444
    386949 5nuo:D (3.2) BS01 C8E ? GO:0016020 ... A0A0W8AQT6 29038444
    386950 5nuo:D (3.2) BS02 C8E ? GO:0016020 ... A0A0W8AQT6 29038444
    386951 5nuo:D (3.2) BS03 C8E ? GO:0016020 ... A0A0W8AQT6 29038444
    386952 5nuo:D (3.2) BS04 C8E ? GO:0016020 ... A0A0W8AQT6 29038444
    386953 5nuo:E (3.2) BS01 C8E ? GO:0001530 ... P02931 29038444
    386954 5nuo:E (3.2) BS02 C8E ? GO:0001530 ... P02931 29038444
    386955 5nuo:F (3.2) BS01 C8E ? GO:0016020 ... A0A0W8AQT6 29038444
    386956 5nuo:F (3.2) BS02 C8E ? GO:0016020 ... A0A0W8AQT6 29038444
    386957 5nup:A (2.9) BS01 C8E ? GO:0006811 ... F2VN85 29038444
    386958 5nup:A (2.9) BS02 C8E ? GO:0006811 ... F2VN85 29038444
    386959 5nup:A (2.9) BS03 C8E ? GO:0006811 ... F2VN85 29038444
    386960 5nup:B (2.9) BS01 C8E ? GO:0006811 ... F2VN85 29038444
    386961 5nup:B (2.9) BS02 C8E ? GO:0006811 ... F2VN85 29038444
    386962 5nup:B (2.9) BS03 C8E ? GO:0006811 ... F2VN85 29038444
    386963 5nup:B (2.9) BS04 C8E ? GO:0006811 ... F2VN85 29038444
    386964 5nup:C (2.9) BS01 C8E ? GO:0006811 ... F2VN85 29038444
    386965 5nup:E (2.9) BS01 C8E ? GO:0016020 ... A0A0W8AQT6 29038444
    386966 5nuq:A (3.2) BS01 C8E ? GO:0001530 ... P02931 29038444
    386967 5nuq:B (3.2) BS01 C8E ? GO:0001530 ... P02931 29038444
    386968 5nuq:D (3.2) BS01 C8E ? GO:0001530 ... P02931 29038444
    386969 5nuq:F (3.2) BS01 C8E ? GO:0001530 ... P02931 29038444
    386970 5nur:A (3.29) BS01 C8E ? GO:0001530 ... P02931 29038444
    386971 5nur:A (3.29) BS02 C8E ? GO:0001530 ... P02931 29038444
    386972 5nur:A (3.29) BS03 CA ? GO:0001530 ... P02931 29038444
    386973 5nur:C (3.29) BS01 CA ? GO:0001530 ... P02931 29038444
    386974 5nur:C (3.29) BS02 C8E ? GO:0001530 ... P02931 29038444
    386975 5nur:D (3.29) BS01 C8E ? GO:0016020 ... A0A0W8AQT6 29038444
    386976 5nur:E (3.29) BS01 Z9M ? GO:0001530 ... P02931 29038444
    386977 5nur:E (3.29) BS02 C8E ? GO:0001530 ... P02931 29038444
    386978 5nur:E (3.29) BS03 CA ? GO:0001530 ... P02931 29038444
    386979 5nus:B (2.2) BS01 ZN ? GO:0000439 ... G0RZE6 28977422
    386980 5nus:B (2.2) BS02 ZN ? GO:0000439 ... G0RZE6 28977422
    386981 5nut:A (1.6) BS01 ZN 2.4.2.-
    2.4.2.30
    GO:0003950 ... Q9H2K2 29374194
    386982 5nut:A (1.6) BS02 9A8 2.4.2.-
    2.4.2.30
    GO:0003950 ... Q9H2K2 29374194 MOAD: ic50=12nM
    386983 5nut:B (1.6) BS01 ZN 2.4.2.-
    2.4.2.30
    GO:0003950 ... Q9H2K2 29374194
    386984 5nut:B (1.6) BS02 9A8 2.4.2.-
    2.4.2.30
    GO:0003950 ... Q9H2K2 29374194 MOAD: ic50=12nM
    386985 5nuu:A (2.5) BS01 9A5 3.1.1.7 GO:0001507 ... P04058 30851693
    386986 5nux:A (2.3) BS01 FMN ? GO:0000166 ... B0JDW3 N/A
    386987 5nux:B (2.3) BS01 FMN ? GO:0000166 ... B0JDW3 N/A
    386988 5nux:C (2.3) BS01 FMN ? GO:0000166 ... B0JDW3 N/A
    386989 5nux:D (2.3) BS01 FMN ? GO:0000166 ... B0JDW3 N/A
    386990 5nv0:A (2.399) BS01 9AH 2.1.1.37 N/A Q9UBC3 N/A
    386991 5nv0:B (2.399) BS01 9AH 2.1.1.37 N/A Q9UBC3 N/A
    386992 5nv1:A (1.51) BS01 MG ? N/A Q60598 N/A
    386993 5nv2:A (2.029) BS01 9AE 2.1.1.37 N/A Q9UBC3 N/A
    386994 5nv2:B (2.029) BS01 9AE 2.1.1.37 N/A Q9UBC3 N/A
    386995 5nv3:A (3.39) BS01 CAP 4.1.1.39 GO:0000287 ... P27997 28803776
    386996 5nv3:A (3.39) BS02 MG 4.1.1.39 GO:0000287 ... P27997 28803776
    386997 5nv3:A (3.39) BS03 CAP 4.1.1.39 GO:0000287 ... P27997 28803776
    386998 5nv3:B (3.39) BS01 CAP 4.1.1.39 GO:0000287 ... P27997 28803776
    386999 5nv3:B (3.39) BS02 MG 4.1.1.39 GO:0000287 ... P27997 28803776
    387000 5nv3:B (3.39) BS03 CAP 4.1.1.39 GO:0000287 ... P27997 28803776

    Reference:
  • Chengxin Zhang, Xi Zhang, Lydia Freddolino, and Yang Zhang. BioLiP2: an updated structure database for biologically relevent ligand-protein interactions, Nucleic Acids Research, gkad630 (2023).
  • Jianyi Yang, Ambrish Roy, and Yang Zhang. BioLiP: a semi-manually curated database for biologically relevant ligand-protein interactions, Nucleic Acids Research, 41: D1096-D1103 (2013) (download the PDF file).