SEQ2FUN

BioLiP
Download all results in tab-seperated text for 942758 receptor-ligand interactions, whose format is explained at readme.txt.
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    # PDB
    (Resolution Å)
    Site # Ligand EC number GO terms UniProt PubMed Binding
    affinity
    391001 5on6:y (3.1) BS01 rna ? GO:0002181 ... P0CX49 29429877
    391002 5on6:y (3.1) BS02 OHX ? GO:0002181 ... P0CX49 29429877
    391003 5on6:z (3.1) BS01 rna ? GO:0002181 ... P0CX82 29429877
    391004 5on6:z (3.1) BS02 rna ? GO:0002181 ... P0CX82 29429877
    391005 5on6:z (3.1) BS03 OHX ? GO:0002181 ... P0CX82 29429877
    391006 5on6:z (3.1) BS04 OHX ? GO:0002181 ... P0CX82 29429877
    391007 5on7:A (3.35) BS01 PIO ? N/A Q05785 29362354
    391008 5on8:A (1.6) BS01 9YH ? GO:0005515 ... P33590 29148757
    391009 5on8:B (1.6) BS01 9YH ? GO:0005515 ... P33590 29148757
    391010 5on9:A (1.7) BS01 9YH ? GO:0005515 ... P33590 29148757
    391011 5on9:B (1.7) BS01 9YH ? GO:0005515 ... P33590 29148757
    391012 5ona:B (2.7) BS01 peptide ? GO:0006402 ... Q92600 29255063
    391013 5ona:E (2.7) BS01 peptide ? GO:0006402 ... Q92600 29255063
    391014 5onb:A (3.0) BS01 peptide ? GO:0006402 ... Q92600 29255063
    391015 5onb:C (3.0) BS01 peptide ? GO:0006402 ... Q92600 29255063
    391016 5onb:E (3.0) BS01 peptide ? GO:0006402 ... Q92600 29255063
    391017 5onb:G (3.0) BS01 peptide ? GO:0006402 ... Q92600 29255063
    391018 5ond:A (2.1) BS01 dna ? GO:0001000 ... P0AFW0 29741479
    391019 5ond:B (2.1) BS01 dna ? GO:0001000 ... P0AFW0 29741479
    391020 5one:A (2.6) BS01 9YQ 2.7.11.1 GO:0000212 ... O14965 28818446 BindingDB: EC50=38nM, IC50=52nM
    391021 5ong:A (2.797) BS01 dna ? GO:0000786 ... P84233 29113904
    391022 5ong:A (2.797) BS02 dna ? GO:0000786 ... P84233 29113904
    391023 5ong:B (2.797) BS01 dna ? GO:0000786 ... P62799 29113904
    391024 5ong:B (2.797) BS02 dna ? GO:0000786 ... P62799 29113904
    391025 5ong:C (2.797) BS01 dna ? GO:0000786 ... P06897 29113904
    391026 5ong:C (2.797) BS02 dna ? GO:0000786 ... P06897 29113904
    391027 5ong:D (2.797) BS01 dna ? GO:0000786 ... P02281 29113904
    391028 5ong:D (2.797) BS02 dna ? GO:0000786 ... P02281 29113904
    391029 5ong:E (2.797) BS01 dna ? GO:0000786 ... P84233 29113904
    391030 5ong:E (2.797) BS02 dna ? GO:0000786 ... P84233 29113904
    391031 5ong:F (2.797) BS01 dna ? GO:0000786 ... P62799 29113904
    391032 5ong:F (2.797) BS02 dna ? GO:0000786 ... P62799 29113904
    391033 5ong:G (2.797) BS01 dna ? GO:0000786 ... P06897 29113904
    391034 5ong:G (2.797) BS02 dna ? GO:0000786 ... P06897 29113904
    391035 5ong:H (2.797) BS01 dna ? GO:0000786 ... P02281 29113904
    391036 5ong:H (2.797) BS02 dna ? GO:0000786 ... P02281 29113904
    391037 5onh:A (3.1) BS01 rna 6.1.1.4 GO:0000166 ... P07813 29111343
    391038 5onh:A (3.1) BS02 ZN 6.1.1.4 GO:0000166 ... P07813 29111343
    391039 5onh:A (3.1) BS03 LSS 6.1.1.4 GO:0000166 ... P07813 29111343 BindingDB: Ki=0.139000nM
    391040 5onh:A (3.1) BS04 VRT 6.1.1.4 GO:0000166 ... P07813 29111343
    391041 5onh:D (3.1) BS01 rna 6.1.1.4 GO:0000166 ... P07813 29111343
    391042 5onh:D (3.1) BS02 ZN 6.1.1.4 GO:0000166 ... P07813 29111343
    391043 5onh:D (3.1) BS03 LSS 6.1.1.4 GO:0000166 ... P07813 29111343 BindingDB: Ki=0.139000nM
    391044 5onh:D (3.1) BS04 VRT 6.1.1.4 GO:0000166 ... P07813 29111343
    391045 5oni:A (2.0) BS01 9YE 2.7.11.1 GO:0004672 ... P68400 29236079
    391046 5oni:B (2.0) BS01 9YE 2.7.11.1 GO:0004672 ... P68400 29236079
    391047 5onj:A (1.7) BS01 peptide ? N/A O31815 30387270
    391048 5onj:A (1.7) BS02 ZN ? N/A O31815 30387270
    391049 5onk:A (1.03) BS01 ZN ? N/A O31815 30387270
    391050 5onl:A (1.7) BS01 010 ? N/A O31815 30387270
    391051 5onl:A (1.7) BS02 FAH ? N/A O31815 30387270
    391052 5onm:A (1.52) BS01 FE 4.2.1.108 GO:0016829 ... A0A1R1AV52 30674920
    391053 5onn:A (1.4) BS01 FE 4.2.1.108 GO:0016829 ... A0A1R1AV52 30674920
    391054 5onn:A (1.4) BS02 9YT 4.2.1.108 GO:0016829 ... A0A1R1AV52 30674920
    391055 5ono:A (2.5) BS01 FE 4.2.1.108 GO:0016829 ... A0A1R1AV52 30674920
    391056 5ono:A (2.5) BS02 4CS 4.2.1.108 GO:0016829 ... A0A1R1AV52 30674920
    391057 5onp:A (1.34) BS01 peptide 3.4.24.27 GO:0004222 ... P43133 30403288
    391058 5onp:A (1.34) BS02 CA 3.4.24.27 GO:0004222 ... P43133 30403288
    391059 5onp:A (1.34) BS03 CA 3.4.24.27 GO:0004222 ... P43133 30403288
    391060 5onp:A (1.34) BS04 CA 3.4.24.27 GO:0004222 ... P43133 30403288
    391061 5onq:A (1.17) BS01 peptide 3.4.24.27 GO:0004222 ... P43133 30403288
    391062 5onq:A (1.17) BS02 CA 3.4.24.27 GO:0004222 ... P43133 30403288
    391063 5onr:A (1.39) BS01 peptide 3.4.24.27 GO:0004222 ... P00800 30403288
    391064 5onr:A (1.39) BS02 CA 3.4.24.27 GO:0004222 ... P00800 30403288
    391065 5onr:A (1.39) BS03 CA 3.4.24.27 GO:0004222 ... P00800 30403288
    391066 5onr:A (1.39) BS04 CA 3.4.24.27 GO:0004222 ... P00800 30403288
    391067 5onr:A (1.39) BS05 CA 3.4.24.27 GO:0004222 ... P00800 30403288
    391068 5onr:A (1.39) BS06 ZN 3.4.24.27 GO:0004222 ... P00800 30403288
    391069 5ons:A (2.14) BS01 peptide ? GO:0000339 ... Q9ULC4 29889857
    391070 5ont:A (2.05) BS01 A0K 3.2.1.208 GO:0004573 ... K5BDL0 31316802
    391071 5ont:B (2.05) BS01 A0K 3.2.1.208 GO:0004573 ... K5BDL0 31316802
    391072 5onu:A (2.22) BS01 C8E ? GO:0015288 ... P0C6Q6 29372896
    391073 5onu:B (2.22) BS01 C8E ? GO:0015288 ... P0C6Q6 29372896
    391074 5onu:C (2.22) BS01 C8E ? GO:0015288 ... P0C6Q6 29372896
    391075 5onv:A (4.1) BS01 ADP 3.6.4.- GO:0000287 ... P68135 29867215
    391076 5onv:B (4.1) BS01 ADP 3.6.4.- GO:0000287 ... P68135 29867215
    391077 5onv:C (4.1) BS01 ADP 3.6.4.- GO:0000287 ... P68135 29867215
    391078 5onv:D (4.1) BS01 ADP 3.6.4.- GO:0000287 ... P68135 29867215
    391079 5onv:E (4.1) BS01 ADP 3.6.4.- GO:0000287 ... P68135 29867215
    391080 5onw:A (2.8) BS01 dna ? GO:0000786 ... P84233 29113904
    391081 5onw:A (2.8) BS02 dna ? GO:0000786 ... P84233 29113904
    391082 5onw:B (2.8) BS01 dna ? GO:0000786 ... P62799 29113904
    391083 5onw:B (2.8) BS02 dna ? GO:0000786 ... P62799 29113904
    391084 5onw:C (2.8) BS01 dna ? GO:0000786 ... P06897 29113904
    391085 5onw:C (2.8) BS02 dna ? GO:0000786 ... P06897 29113904
    391086 5onw:D (2.8) BS01 dna ? GO:0000786 ... P02281 29113904
    391087 5onw:D (2.8) BS02 dna ? GO:0000786 ... P02281 29113904
    391088 5onw:E (2.8) BS01 dna ? GO:0000786 ... P84233 29113904
    391089 5onw:E (2.8) BS02 dna ? GO:0000786 ... P84233 29113904
    391090 5onw:F (2.8) BS01 dna ? GO:0000786 ... P62799 29113904
    391091 5onw:F (2.8) BS02 dna ? GO:0000786 ... P62799 29113904
    391092 5onw:G (2.8) BS01 dna ? GO:0000786 ... P06897 29113904
    391093 5onw:G (2.8) BS02 dna ? GO:0000786 ... P06897 29113904
    391094 5onw:H (2.8) BS01 dna ? GO:0000786 ... P02281 29113904
    391095 5onw:H (2.8) BS02 dna ? GO:0000786 ... P02281 29113904
    391096 5onx:A (1.6) BS01 CU 1.7.2.1 GO:0005507 ... O68601 29354268
    391097 5onx:A (1.6) BS02 CU 1.7.2.1 GO:0005507 ... O68601 29354268
    391098 5onx:A (1.6) BS03 ZN 1.7.2.1 GO:0005507 ... O68601 29354268
    391099 5onx:A (1.6) BS04 OXY 1.7.2.1 GO:0005507 ... O68601 29354268
    391100 5ony:A (1.6) BS01 CU 1.7.2.1 GO:0005507 ... O68601 29354268
    391101 5ony:A (1.6) BS02 CU 1.7.2.1 GO:0005507 ... O68601 29354268
    391102 5onz:A (1.93) BS01 9YW 3.2.1.208 GO:0004573 ... K5BDL0 31316802
    391103 5onz:A (1.93) BS02 9YW 3.2.1.208 GO:0004573 ... K5BDL0 31316802
    391104 5onz:A (1.93) BS03 SER 3.2.1.208 GO:0004573 ... K5BDL0 31316802
    391105 5onz:B (1.93) BS01 9YW 3.2.1.208 GO:0004573 ... K5BDL0 31316802
    391106 5onz:B (1.93) BS02 SER 3.2.1.208 GO:0004573 ... K5BDL0 31316802
    391107 5oo0:A (1.6) BS01 9YZ 2.7.11.22 GO:0000082 ... P24941 29480525
    391108 5oo1:A (2.0) BS01 9Z2 2.7.11.22 GO:0000082 ... P24941 N/A
    391109 5oo2:A (2.06) BS01 9YW 3.2.1.208 GO:0004573 ... K5BDL0 31316802
    391110 5oo2:A (2.06) BS02 SER 3.2.1.208 GO:0004573 ... K5BDL0 31316802
    391111 5oo2:B (2.06) BS01 9YW 3.2.1.208 GO:0004573 ... K5BDL0 31316802
    391112 5oo3:A (1.73) BS01 9ZB 2.7.11.22 GO:0000082 ... P24941 N/A
    391113 5oo4:A (1.6) BS01 URI ? GO:0016853 ... E2EKP5 28786545
    391114 5oo5:A (1.78) BS01 UUA ? GO:0016853 ... E2EKP5 28786545
    391115 5oo6:A (2.8) BS01 peptide ? GO:0000184 ... Q09161 29101316
    391116 5oo6:B (2.8) BS01 peptide ? GO:0000184 ... P52298 29101316
    391117 5oo6:B (2.8) BS02 MGT ? GO:0000184 ... P52298 29101316
    391118 5oo6:D (2.8) BS01 peptide ? GO:0000184 ... Q09161 29101316
    391119 5oo6:E (2.8) BS01 peptide ? GO:0000184 ... P52298 29101316
    391120 5oo6:E (2.8) BS02 MGT ? GO:0000184 ... P52298 29101316
    391121 5oo6:G (2.8) BS01 peptide ? GO:0000184 ... Q09161 29101316
    391122 5oo6:H (2.8) BS01 peptide ? GO:0000184 ... P52298 29101316
    391123 5oo6:H (2.8) BS02 MGT ? GO:0000184 ... P52298 29101316
    391124 5oo6:J (2.8) BS01 peptide ? GO:0000184 ... Q09161 29101316
    391125 5oo6:K (2.8) BS01 peptide ? GO:0000184 ... P52298 29101316
    391126 5oo6:K (2.8) BS02 MGT ? GO:0000184 ... P52298 29101316
    391127 5oo6:M (2.8) BS01 peptide ? GO:0000184 ... Q09161 29101316
    391128 5oo6:N (2.8) BS01 peptide ? GO:0000184 ... P52298 29101316
    391129 5oo6:N (2.8) BS02 MGT ? GO:0000184 ... P52298 29101316
    391130 5oo6:P (2.8) BS01 peptide ? GO:0000184 ... Q09161 29101316
    391131 5oo6:Q (2.8) BS01 peptide ? GO:0000184 ... P52298 29101316
    391132 5oo6:Q (2.8) BS02 MGT ? GO:0000184 ... P52298 29101316
    391133 5oo6:S (2.8) BS01 peptide ? GO:0000184 ... Q09161 29101316
    391134 5oo6:T (2.8) BS01 peptide ? GO:0000184 ... P52298 29101316
    391135 5oo6:T (2.8) BS02 MGT ? GO:0000184 ... P52298 29101316
    391136 5oo6:V (2.8) BS01 peptide ? GO:0000184 ... Q09161 29101316
    391137 5oo6:W (2.8) BS01 peptide ? GO:0000184 ... P52298 29101316
    391138 5oo6:W (2.8) BS02 MGT ? GO:0000184 ... P52298 29101316
    391139 5oo8:A (1.78) BS01 URI ? GO:0016853 ... E2EKP5 28786545
    391140 5oo9:A (1.59) BS01 URI ? GO:0016853 ... E2EKP5 28786545
    391141 5ooa:A (1.6) BS01 URI ? GO:0016853 ... E2EKP5 28786545
    391142 5oob:A (2.79) BS01 peptide ? GO:0000184 ... Q09161 29101316
    391143 5oob:B (2.79) BS01 peptide ? GO:0000184 ... P52298 29101316
    391144 5oob:B (2.79) BS02 MGT ? GO:0000184 ... P52298 29101316
    391145 5oob:C (2.79) BS01 peptide ? GO:0000184 ... Q09161 29101316
    391146 5oob:D (2.79) BS01 peptide ? GO:0000184 ... P52298 29101316
    391147 5oob:D (2.79) BS02 MGT ? GO:0000184 ... P52298 29101316
    391148 5oob:G (2.79) BS01 MGT ? GO:0000184 ... P52298 29101316
    391149 5oob:I (2.79) BS01 peptide ? GO:0000184 ... Q09161 29101316
    391150 5oob:J (2.79) BS01 peptide ? GO:0000184 ... P52298 29101316
    391151 5oob:J (2.79) BS02 MGT ? GO:0000184 ... P52298 29101316
    391152 5ooc:A (3.6) BS01 ADP 3.6.4.- GO:0000287 ... P68135 29867215
    391153 5ooc:A (3.6) BS02 9ZK 3.6.4.- GO:0000287 ... P68135 29867215
    391154 5ooc:A (3.6) BS03 9ZK 3.6.4.- GO:0000287 ... P68135 29867215
    391155 5ooc:B (3.6) BS01 9ZK 3.6.4.- GO:0000287 ... P68135 29867215
    391156 5ooc:B (3.6) BS02 ADP 3.6.4.- GO:0000287 ... P68135 29867215
    391157 5ooc:B (3.6) BS03 9ZK 3.6.4.- GO:0000287 ... P68135 29867215
    391158 5ooc:C (3.6) BS01 9ZK 3.6.4.- GO:0000287 ... P68135 29867215
    391159 5ooc:C (3.6) BS02 ADP 3.6.4.- GO:0000287 ... P68135 29867215
    391160 5ooc:C (3.6) BS03 9ZK 3.6.4.- GO:0000287 ... P68135 29867215
    391161 5ooc:D (3.6) BS01 9ZK 3.6.4.- GO:0000287 ... P68135 29867215
    391162 5ooc:D (3.6) BS02 ADP 3.6.4.- GO:0000287 ... P68135 29867215
    391163 5ooc:D (3.6) BS03 9ZK 3.6.4.- GO:0000287 ... P68135 29867215
    391164 5ooc:E (3.6) BS01 9ZK 3.6.4.- GO:0000287 ... P68135 29867215
    391165 5ooc:E (3.6) BS02 ADP 3.6.4.- GO:0000287 ... P68135 29867215
    391166 5ood:A (3.7) BS01 ADP 3.6.4.- GO:0000287 ... P68135 29867215
    391167 5ood:A (3.7) BS02 PO4 3.6.4.- GO:0000287 ... P68135 29867215
    391168 5ood:A (3.7) BS03 9ZK 3.6.4.- GO:0000287 ... P68135 29867215
    391169 5ood:A (3.7) BS04 9ZK 3.6.4.- GO:0000287 ... P68135 29867215
    391170 5ood:B (3.7) BS01 9ZK 3.6.4.- GO:0000287 ... P68135 29867215
    391171 5ood:B (3.7) BS02 ADP 3.6.4.- GO:0000287 ... P68135 29867215
    391172 5ood:B (3.7) BS03 PO4 3.6.4.- GO:0000287 ... P68135 29867215
    391173 5ood:B (3.7) BS04 9ZK 3.6.4.- GO:0000287 ... P68135 29867215
    391174 5ood:C (3.7) BS01 9ZK 3.6.4.- GO:0000287 ... P68135 29867215
    391175 5ood:C (3.7) BS02 ADP 3.6.4.- GO:0000287 ... P68135 29867215
    391176 5ood:C (3.7) BS03 PO4 3.6.4.- GO:0000287 ... P68135 29867215
    391177 5ood:C (3.7) BS04 9ZK 3.6.4.- GO:0000287 ... P68135 29867215
    391178 5ood:D (3.7) BS01 9ZK 3.6.4.- GO:0000287 ... P68135 29867215
    391179 5ood:D (3.7) BS02 ADP 3.6.4.- GO:0000287 ... P68135 29867215
    391180 5ood:D (3.7) BS03 PO4 3.6.4.- GO:0000287 ... P68135 29867215
    391181 5ood:D (3.7) BS04 9ZK 3.6.4.- GO:0000287 ... P68135 29867215
    391182 5ood:E (3.7) BS01 9ZK 3.6.4.- GO:0000287 ... P68135 29867215
    391183 5ood:E (3.7) BS02 ADP 3.6.4.- GO:0000287 ... P68135 29867215
    391184 5ood:E (3.7) BS03 PO4 3.6.4.- GO:0000287 ... P68135 29867215
    391185 5ooe:A (3.6) BS01 ANP 3.6.4.- GO:0000287 ... P68135 29867215
    391186 5ooe:B (3.6) BS01 ANP 3.6.4.- GO:0000287 ... P68135 29867215
    391187 5ooe:C (3.6) BS01 ANP 3.6.4.- GO:0000287 ... P68135 29867215
    391188 5ooe:D (3.6) BS01 ANP 3.6.4.- GO:0000287 ... P68135 29867215
    391189 5ooe:E (3.6) BS01 ANP 3.6.4.- GO:0000287 ... P68135 29867215
    391190 5oof:A (3.4) BS01 ADP 3.6.4.- GO:0000287 ... P68135 29867215
    391191 5oof:B (3.4) BS01 ADP 3.6.4.- GO:0000287 ... P68135 29867215
    391192 5oof:C (3.4) BS01 ADP 3.6.4.- GO:0000287 ... P68135 29867215
    391193 5oof:D (3.4) BS01 ADP 3.6.4.- GO:0000287 ... P68135 29867215
    391194 5oof:E (3.4) BS01 ADP 3.6.4.- GO:0000287 ... P68135 29867215
    391195 5oog:A (1.33) BS01 A0B 1.3.1.-
    1.5.1.30
    2.6.99.-
    GO:0004074 ... P30043 29487133 MOAD: ic50=0.7uM
    391196 5oog:A (1.33) BS02 NAP 1.3.1.-
    1.5.1.30
    2.6.99.-
    GO:0004074 ... P30043 29487133
    391197 5ooh:A (1.2) BS01 NAP 1.3.1.-
    1.5.1.30
    2.6.99.-
    GO:0004074 ... P30043 29487133
    391198 5ooh:A (1.2) BS02 9ZZ 1.3.1.-
    1.5.1.30
    2.6.99.-
    GO:0004074 ... P30043 29487133 MOAD: ic50=0.41uM
    391199 5ooi:A (1.998) BS01 9YE 2.7.11.1 GO:0000785 ... P19784 29236079
    391200 5ooi:B (1.998) BS01 9YE 2.7.11.1 GO:0000785 ... P19784 29236079

    Reference:
  • Chengxin Zhang, Xi Zhang, Lydia Freddolino, and Yang Zhang. BioLiP2: an updated structure database for biologically relevent ligand-protein interactions, Nucleic Acids Research, gkad630 (2023).
  • Jianyi Yang, Ambrish Roy, and Yang Zhang. BioLiP: a semi-manually curated database for biologically relevant ligand-protein interactions, Nucleic Acids Research, 41: D1096-D1103 (2013) (download the PDF file).