SEQ2FUN

BioLiP
Download all results in tab-seperated text for 1072681 receptor-ligand interactions, whose format is explained at readme.txt.
  • Hover over PDB to view the title of the structure. Click PDB to view the structure at the RCSB PDB database. Resolution -1.00 means the resolution is unavailable, e.g., for NMR structures.
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    # PDB
    (Resolution Å)
    Site # Ligand EC number GO terms UniProt PubMed Binding
    affinity
    39001 1ofh:C (2.5) BS01 ADP ? GO:0005524 ... P43773 12823960
    39002 1ofh:G (2.5) BS01 MG 3.4.25.2 GO:0004298 ... P43772 12823960
    39003 1ofh:H (2.5) BS01 MG 3.4.25.2 GO:0004298 ... P43772 12823960
    39004 1ofh:I (2.5) BS01 MG 3.4.25.2 GO:0004298 ... P43772 12823960
    39005 1ofh:L (2.5) BS01 MG 3.4.25.2 GO:0004298 ... P43772 12823960
    39006 1ofh:M (2.5) BS01 MG 3.4.25.2 GO:0004298 ... P43772 12823960
    39007 1ofh:N (2.5) BS01 MG 3.4.25.2 GO:0004298 ... P43772 12823960
    39008 1ofi:A (3.2) BS01 ADP ? GO:0005524 ... P43773 12823960
    39009 1ofi:B (3.2) BS01 ADP ? GO:0005524 ... P43773 12823960
    39010 1ofi:C (3.2) BS01 ADP ? GO:0005524 ... P43773 12823960
    39011 1ofi:G (3.2) BS01 LVS 3.4.25.2 GO:0004298 ... P43772 12823960
    39012 1ofi:G (3.2) BS02 MG 3.4.25.2 GO:0004298 ... P43772 12823960
    39013 1ofi:H (3.2) BS01 LVS 3.4.25.2 GO:0004298 ... P43772 12823960
    39014 1ofi:H (3.2) BS02 MG 3.4.25.2 GO:0004298 ... P43772 12823960
    39015 1ofi:I (3.2) BS01 LVS 3.4.25.2 GO:0004298 ... P43772 12823960
    39016 1ofi:I (3.2) BS02 MG 3.4.25.2 GO:0004298 ... P43772 12823960
    39017 1ofi:L (3.2) BS01 MG 3.4.25.2 GO:0004298 ... P43772 12823960
    39018 1ofi:M (3.2) BS01 MG 3.4.25.2 GO:0004298 ... P43772 12823960
    39019 1ofi:N (3.2) BS01 MG 3.4.25.2 GO:0004298 ... P43772 12823960
    39020 1ofj:A (1.8) BS01 HEM 1.11.1.-
    1.7.-.-
    GO:0004601 ... P02185 9915818
    39021 1ofk:A (1.8) BS01 HEM 1.11.1.-
    1.7.-.-
    GO:0004601 ... P02185 9915818
    39022 1ofl:A (1.7) BS01 MAN 4.2.2.19 GO:0033999 ... Q46079 15155751
    39023 1ofl:A (1.7) BS02 GCU 4.2.2.19 GO:0033999 ... Q46079 15155751
    39024 1ofl:A (1.7) BS03 ASG 4.2.2.19 GO:0033999 ... Q46079 15155751
    39025 1ofl:A (1.7) BS04 GCD 4.2.2.19 GO:0033999 ... Q46079 15155751
    39026 1ofl:A (1.7) BS05 ASG 4.2.2.19 GO:0033999 ... Q46079 15155751
    39027 1ofl:A (1.7) BS06 GCD 4.2.2.19 GO:0033999 ... Q46079 15155751
    39028 1ofl:A (1.7) BS07 ASG 4.2.2.19 GO:0033999 ... Q46079 15155751
    39029 1ofl:A (1.7) BS08 NGK 4.2.2.19 GO:0033999 ... Q46079 15155751
    39030 1ofl:A (1.7) BS09 CA 4.2.2.19 GO:0033999 ... Q46079 15155751
    39031 1ofm:A (1.8) BS01 MAN 4.2.2.19 GO:0033999 ... Q46079 15155751
    39032 1ofm:A (1.8) BS02 ASG 4.2.2.19 GO:0033999 ... Q46079 15155751
    39033 1ofo:A (1.86) BS01 PGA 2.5.1.54 GO:0003849 ... P32449 15019786
    39034 1ofo:B (1.86) BS01 PGA 2.5.1.54 GO:0003849 ... P32449 15019786
    39035 1ofq:A (2.7) BS01 MN 2.5.1.54 GO:0003849 ... P32449 15019786
    39036 1ofq:B (2.7) BS01 MN 2.5.1.54 GO:0003849 ... P32449 15019786
    39037 1ofq:C (2.7) BS01 MN 2.5.1.54 GO:0003849 ... P32449 15019786
    39038 1ofq:D (2.7) BS01 MN 2.5.1.54 GO:0003849 ... P32449 15019786
    39039 1ofr:A (2.7) BS01 MN 2.5.1.54 GO:0003849 ... P32449 15019786
    39040 1ofr:B (2.7) BS01 MN 2.5.1.54 GO:0003849 ... P32449 15019786
    39041 1ofr:C (2.7) BS01 MN 2.5.1.54 GO:0003849 ... P32449 15019786
    39042 1ofr:C (2.7) BS02 PHE 2.5.1.54 GO:0003849 ... P32449 15019786
    39043 1ofr:C (2.7) BS03 PHE 2.5.1.54 GO:0003849 ... P32449 15019786
    39044 1ofr:D (2.7) BS01 PHE 2.5.1.54 GO:0003849 ... P32449 15019786
    39045 1ofr:D (2.7) BS02 MN 2.5.1.54 GO:0003849 ... P32449 15019786
    39046 1ofr:D (2.7) BS03 PHE 2.5.1.54 GO:0003849 ... P32449 15019786
    39047 1ofr:E (2.7) BS01 MN 2.5.1.54 GO:0003849 ... P32449 15019786
    39048 1ofr:F (2.7) BS01 MN 2.5.1.54 GO:0003849 ... P32449 15019786
    39049 1ofr:G (2.7) BS01 MN 2.5.1.54 GO:0003849 ... P32449 15019786
    39050 1ofr:G (2.7) BS02 PHE 2.5.1.54 GO:0003849 ... P32449 15019786
    39051 1ofr:H (2.7) BS01 MN 2.5.1.54 GO:0003849 ... P32449 15019786
    39052 1ofr:H (2.7) BS02 PHE 2.5.1.54 GO:0003849 ... P32449 15019786
    39053 1ofr:H (2.7) BS03 PHE 2.5.1.54 GO:0003849 ... P32449 15019786
    39054 1ofs:A (1.8) BS01 GLC ? GO:0030246 ... P02867 N/A
    39055 1ofs:A (1.8) BS02 MN ? GO:0030246 ... P02867 N/A
    39056 1ofs:A (1.8) BS03 CA ? GO:0030246 ... P02867 N/A
    39057 1ofs:B (1.8) BS01 GLC ? GO:0030246 ... P02867 N/A
    39058 1ofs:B (1.8) BS02 FRU ? GO:0030246 ... P02867 N/A
    39059 1ofs:C (1.8) BS01 GLC ? GO:0030246 ... P02867 N/A
    39060 1ofs:C (1.8) BS02 MN ? GO:0030246 ... P02867 N/A
    39061 1ofs:C (1.8) BS03 CA ? GO:0030246 ... P02867 N/A
    39062 1ofs:D (1.8) BS01 GLC ? GO:0030246 ... P02867 N/A
    39063 1ofs:D (1.8) BS02 FRU ? GO:0030246 ... P02867 N/A
    39064 1ofu:A (2.1) BS01 GDP ? GO:0003924 ... P47204 12808143
    39065 1ofu:B (2.1) BS01 GDP ? GO:0003924 ... P47204 12808143
    39066 1ofv:A (1.7) BS01 FMN ? GO:0009055 ... P10340 10610791
    39067 1ofw:A (1.5) BS01 HEC ? GO:0009055 ... Q9RN68 12750363
    39068 1ofw:A (1.5) BS02 HEC ? GO:0009055 ... Q9RN68 12750363
    39069 1ofw:A (1.5) BS03 HEC ? GO:0009055 ... Q9RN68 12750363
    39070 1ofw:A (1.5) BS04 HEC ? GO:0009055 ... Q9RN68 12750363
    39071 1ofw:A (1.5) BS05 HEC ? GO:0009055 ... Q9RN68 12750363
    39072 1ofw:A (1.5) BS06 HEC ? GO:0009055 ... Q9RN68 12750363
    39073 1ofw:A (1.5) BS07 HEC ? GO:0009055 ... Q9RN68 12750363
    39074 1ofw:A (1.5) BS08 HEC ? GO:0009055 ... Q9RN68 12750363
    39075 1ofw:A (1.5) BS09 HEC ? GO:0009055 ... Q9RN68 12750363
    39076 1ofw:B (1.5) BS01 HEC ? GO:0009055 ... Q9RN68 12750363
    39077 1ofw:B (1.5) BS02 HEC ? GO:0009055 ... Q9RN68 12750363
    39078 1ofw:B (1.5) BS03 HEC ? GO:0009055 ... Q9RN68 12750363
    39079 1ofw:B (1.5) BS04 HEC ? GO:0009055 ... Q9RN68 12750363
    39080 1ofw:B (1.5) BS05 HEC ? GO:0009055 ... Q9RN68 12750363
    39081 1ofw:B (1.5) BS06 HEC ? GO:0009055 ... Q9RN68 12750363
    39082 1ofw:B (1.5) BS07 HEC ? GO:0009055 ... Q9RN68 12750363
    39083 1ofw:B (1.5) BS08 HEC ? GO:0009055 ... Q9RN68 12750363
    39084 1ofw:B (1.5) BS09 HEC ? GO:0009055 ... Q9RN68 12750363
    39085 1ofw:B (1.5) BS10 HEC ? GO:0009055 ... Q9RN68 12750363
    39086 1ofy:A (2.0) BS01 HEC ? GO:0009055 ... Q9RN68 12750363
    39087 1ofy:A (2.0) BS02 HEC ? GO:0009055 ... Q9RN68 12750363
    39088 1ofy:A (2.0) BS03 HEC ? GO:0009055 ... Q9RN68 12750363
    39089 1ofy:A (2.0) BS04 HEC ? GO:0009055 ... Q9RN68 12750363
    39090 1ofy:A (2.0) BS05 HEC ? GO:0009055 ... Q9RN68 12750363
    39091 1ofy:A (2.0) BS06 HEC ? GO:0009055 ... Q9RN68 12750363
    39092 1ofy:A (2.0) BS07 HEC ? GO:0009055 ... Q9RN68 12750363
    39093 1ofy:A (2.0) BS08 HEC ? GO:0009055 ... Q9RN68 12750363
    39094 1ofy:A (2.0) BS09 HEC ? GO:0009055 ... Q9RN68 12750363
    39095 1ofy:B (2.0) BS01 HEC ? GO:0009055 ... Q9RN68 12750363
    39096 1ofy:B (2.0) BS02 HEC ? GO:0009055 ... Q9RN68 12750363
    39097 1ofy:B (2.0) BS03 HEC ? GO:0009055 ... Q9RN68 12750363
    39098 1ofy:B (2.0) BS04 HEC ? GO:0009055 ... Q9RN68 12750363
    39099 1ofy:B (2.0) BS05 HEC ? GO:0009055 ... Q9RN68 12750363
    39100 1ofy:B (2.0) BS06 HEC ? GO:0009055 ... Q9RN68 12750363
    39101 1ofy:B (2.0) BS07 HEC ? GO:0009055 ... Q9RN68 12750363
    39102 1ofy:B (2.0) BS08 HEC ? GO:0009055 ... Q9RN68 12750363
    39103 1ofy:B (2.0) BS09 HEC ? GO:0009055 ... Q9RN68 12750363
    39104 1ofy:B (2.0) BS10 HEC ? GO:0009055 ... Q9RN68 12750363
    39105 1ofz:A (1.5) BS01 FUL ? GO:0030246 ... P18891 12732625 MOAD: Kd=24.1uM
    39106 1ofz:A (1.5) BS02 FUL ? GO:0030246 ... P18891 12732625 MOAD: Kd=24.1uM
    39107 1ofz:A (1.5) BS03 FUL ? GO:0030246 ... P18891 12732625 MOAD: Kd=24.1uM
    39108 1ofz:A (1.5) BS04 FUC ? GO:0030246 ... P18891 12732625
    39109 1ofz:A (1.5) BS05 FUL ? GO:0030246 ... P18891 12732625 MOAD: Kd=24.1uM
    39110 1ofz:A (1.5) BS06 FUC ? GO:0030246 ... P18891 12732625
    39111 1ofz:B (1.5) BS01 FUL ? GO:0030246 ... P18891 12732625 MOAD: Kd=24.1uM
    39112 1ofz:B (1.5) BS02 FUC ? GO:0030246 ... P18891 12732625
    39113 1ofz:B (1.5) BS03 FUL ? GO:0030246 ... P18891 12732625 MOAD: Kd=24.1uM
    39114 1ofz:B (1.5) BS04 FUC ? GO:0030246 ... P18891 12732625
    39115 1ofz:B (1.5) BS05 FUL ? GO:0030246 ... P18891 12732625 MOAD: Kd=24.1uM
    39116 1ofz:B (1.5) BS06 FUL ? GO:0030246 ... P18891 12732625 MOAD: Kd=24.1uM
    39117 1og0:A (2.7) BS01 MN 2.5.1.54 GO:0003849 ... P32449 N/A
    39118 1og0:A (2.7) BS02 PHE 2.5.1.54 GO:0003849 ... P32449 N/A
    39119 1og0:B (2.7) BS01 PHE 2.5.1.54 GO:0003849 ... P32449 N/A
    39120 1og0:B (2.7) BS02 MN 2.5.1.54 GO:0003849 ... P32449 N/A
    39121 1og0:C (2.7) BS01 MN 2.5.1.54 GO:0003849 ... P32449 N/A
    39122 1og0:C (2.7) BS02 PHE 2.5.1.54 GO:0003849 ... P32449 N/A
    39123 1og0:C (2.7) BS03 PHE 2.5.1.54 GO:0003849 ... P32449 N/A
    39124 1og0:D (2.7) BS01 PHE 2.5.1.54 GO:0003849 ... P32449 N/A
    39125 1og0:D (2.7) BS02 MN 2.5.1.54 GO:0003849 ... P32449 N/A
    39126 1og0:D (2.7) BS03 PHE 2.5.1.54 GO:0003849 ... P32449 N/A
    39127 1og0:E (2.7) BS01 MN 2.5.1.54 GO:0003849 ... P32449 N/A
    39128 1og0:E (2.7) BS02 PHE 2.5.1.54 GO:0003849 ... P32449 N/A
    39129 1og0:E (2.7) BS03 PHE 2.5.1.54 GO:0003849 ... P32449 N/A
    39130 1og0:F (2.7) BS01 PHE 2.5.1.54 GO:0003849 ... P32449 N/A
    39131 1og0:F (2.7) BS02 MN 2.5.1.54 GO:0003849 ... P32449 N/A
    39132 1og0:F (2.7) BS03 PHE 2.5.1.54 GO:0003849 ... P32449 N/A
    39133 1og0:G (2.7) BS01 MN 2.5.1.54 GO:0003849 ... P32449 N/A
    39134 1og0:G (2.7) BS02 PHE 2.5.1.54 GO:0003849 ... P32449 N/A
    39135 1og0:G (2.7) BS03 PHE 2.5.1.54 GO:0003849 ... P32449 N/A
    39136 1og0:H (2.7) BS01 PHE 2.5.1.54 GO:0003849 ... P32449 N/A
    39137 1og0:H (2.7) BS02 MN 2.5.1.54 GO:0003849 ... P32449 N/A
    39138 1og0:H (2.7) BS03 PHE 2.5.1.54 GO:0003849 ... P32449 N/A
    39139 1og1:A (2.0) BS01 TAD 2.4.2.31
    3.2.2.5
    GO:0106274 ... P20974 12939142
    39140 1og2:A (2.6) BS01 HEC 1.14.14.1
    1.14.14.51
    1.14.14.52
    1.14.14.53
    GO:0004497 ... P11712 12861225
    39141 1og2:B (2.6) BS01 HEC 1.14.14.1
    1.14.14.51
    1.14.14.52
    1.14.14.53
    GO:0004497 ... P11712 12861225
    39142 1og3:A (2.6) BS01 NAD 2.4.2.31
    3.2.2.5
    GO:0106274 ... P20974 12939142
    39143 1og4:A (2.6) BS01 NAI 2.4.2.31
    3.2.2.5
    GO:0106274 ... P20974 12939142
    39144 1og5:A (2.55) BS01 HEC 1.14.14.1
    1.14.14.51
    1.14.14.52
    1.14.14.53
    GO:0004497 ... P11712 12861225
    39145 1og5:A (2.55) BS02 SWF 1.14.14.1
    1.14.14.51
    1.14.14.52
    1.14.14.53
    GO:0004497 ... P11712 12861225
    39146 1og5:B (2.55) BS01 HEC 1.14.14.1
    1.14.14.51
    1.14.14.52
    1.14.14.53
    GO:0004497 ... P11712 12861225
    39147 1og5:B (2.55) BS02 SWF 1.14.14.1
    1.14.14.51
    1.14.14.52
    1.14.14.53
    GO:0004497 ... P11712 12861225
    39148 1og6:A (2.8) BS01 NAP 1.-.-.- GO:0005829 ... P76187 N/A
    39149 1og6:B (2.8) BS01 NAP 1.-.-.- GO:0005829 ... P76187 N/A
    39150 1og6:C (2.8) BS01 NAP 1.-.-.- GO:0005829 ... P76187 N/A
    39151 1oga:A (1.4) BS01 peptide ? N/A P04439 12796775
    39152 1oga:D (1.4) BS01 peptide ? N/A P01848 12796775
    39153 1oga:E (1.4) BS01 peptide ? N/A P01850 12796775
    39154 1ogd:A (1.95) BS01 RIP 5.4.99.62 GO:0005737 ... P36946 12738765 MOAD: Kd=0.93mM
    39155 1ogd:B (1.95) BS01 RIP 5.4.99.62 GO:0005737 ... P36946 12738765 MOAD: Kd=0.93mM
    39156 1ogd:C (1.95) BS01 RIP 5.4.99.62 GO:0005737 ... P36946 12738765 MOAD: Kd=0.93mM
    39157 1ogd:D (1.95) BS01 RIP 5.4.99.62 GO:0005737 ... P36946 12738765 MOAD: Kd=0.93mM
    39158 1ogd:E (1.95) BS01 RIP 5.4.99.62 GO:0005737 ... P36946 12738765 MOAD: Kd=0.93mM
    39159 1oge:A (2.05) BS01 RP5 5.4.99.62 GO:0005737 ... P36946 12738765
    39160 1oge:B (2.05) BS01 RP5 5.4.99.62 GO:0005737 ... P36946 12738765
    39161 1oge:C (2.05) BS01 RP5 5.4.99.62 GO:0005737 ... P36946 12738765
    39162 1oge:D (2.05) BS01 RP5 5.4.99.62 GO:0005737 ... P36946 12738765
    39163 1oge:E (2.05) BS01 RP5 5.4.99.62 GO:0005737 ... P36946 12738765
    39164 1ogg:A (1.97) BS01 AMI 3.2.1.14 GO:0004553 ... P11797 14726210
    39165 1ogg:B (1.97) BS01 AMI 3.2.1.14 GO:0004553 ... P11797 14726210
    39166 1ogi:A (1.64) BS01 FAD 1.18.1.2 GO:0016491 ... P21890 14500716
    39167 1ogj:A (1.64) BS01 FAD 1.18.1.2 GO:0016491 ... P21890 14500716
    39168 1ogo:X (1.65) BS01 BGC 3.2.1.11 GO:0004553 ... P48845 12962629
    39169 1ogo:X (1.65) BS02 GLC 3.2.1.11 GO:0004553 ... P48845 12962629
    39170 1ogp:A (2.6) BS01 MTQ 1.8.3.1 GO:0005739 ... Q9S850 14527393
    39171 1ogp:B (2.6) BS01 MTQ 1.8.3.1 GO:0005739 ... Q9S850 14527393
    39172 1ogp:C (2.6) BS01 MTQ 1.8.3.1 GO:0005739 ... Q9S850 14527393
    39173 1ogp:D (2.6) BS01 MTQ 1.8.3.1 GO:0005739 ... Q9S850 14527393
    39174 1ogp:E (2.6) BS01 MTQ 1.8.3.1 GO:0005739 ... Q9S850 14527393
    39175 1ogp:F (2.6) BS01 MTQ 1.8.3.1 GO:0005739 ... Q9S850 14527393
    39176 1ogt:A (1.47) BS01 peptide ? N/A P01889 14734527
    39177 1ogu:A (2.6) BS01 ST8 2.7.11.22 GO:0000082 ... P24941 12941338 BindingDB: Ki=2400nM, IC50=34nM
    39178 1ogu:C (2.6) BS01 ST8 2.7.11.22 GO:0000082 ... P24941 12941338 BindingDB: Ki=2400nM, IC50=34nM
    39179 1ogv:H (2.35) BS01 CDL ? GO:0019684 ... P0C0Y7 12899837
    39180 1ogv:L (2.35) BS01 BCL ? GO:0009772 ... P0C0Y8 12899837
    39181 1ogv:L (2.35) BS02 BCL ? GO:0009772 ... P0C0Y8 12899837
    39182 1ogv:L (2.35) BS03 BPH ? GO:0009772 ... P0C0Y8 12899837
    39183 1ogv:L (2.35) BS04 BCL ? GO:0009772 ... P0C0Y8 12899837
    39184 1ogv:L (2.35) BS05 BPH ? GO:0009772 ... P0C0Y8 12899837
    39185 1ogv:L (2.35) BS06 U10 ? GO:0009772 ... P0C0Y8 12899837
    39186 1ogv:L (2.35) BS07 FE2 ? GO:0009772 ... P0C0Y8 12899837
    39187 1ogv:M (2.35) BS01 BCL ? GO:0009772 ... P0C0Y9 12899837
    39188 1ogv:M (2.35) BS02 BPH ? GO:0009772 ... P0C0Y9 12899837
    39189 1ogv:M (2.35) BS03 BCL ? GO:0009772 ... P0C0Y9 12899837
    39190 1ogv:M (2.35) BS04 BCL ? GO:0009772 ... P0C0Y9 12899837
    39191 1ogv:M (2.35) BS05 BPH ? GO:0009772 ... P0C0Y9 12899837
    39192 1ogv:M (2.35) BS06 U10 ? GO:0009772 ... P0C0Y9 12899837
    39193 1ogv:M (2.35) BS07 CDL ? GO:0009772 ... P0C0Y9 12899837
    39194 1ogv:M (2.35) BS08 FE2 ? GO:0009772 ... P0C0Y9 12899837
    39195 1ogv:M (2.35) BS09 CL ? GO:0009772 ... P0C0Y9 12899837
    39196 1ogx:A (2.0) BS01 EQU 5.3.3.1 GO:0004769 ... P07445 11007792 MOAD: Kd=0.81uM
    39197 1ogx:B (2.0) BS01 EQU 5.3.3.1 GO:0004769 ... P07445 11007792 MOAD: Kd=0.81uM
    39198 1ogy:A (3.2) BS01 SF4 1.9.6.1 GO:0005506 ... Q53176 14528294
    39199 1ogy:A (3.2) BS02 MGD 1.9.6.1 GO:0005506 ... Q53176 14528294
    39200 1ogy:A (3.2) BS03 MGD 1.9.6.1 GO:0005506 ... Q53176 14528294

    Reference:
  • Chengxin Zhang, Xi Zhang, Lydia Freddolino, and Yang Zhang. BioLiP2: an updated structure database for biologically relevent ligand-protein interactions, Nucleic Acids Research, gkad630 (2023).
  • Jianyi Yang, Ambrish Roy, and Yang Zhang. BioLiP: a semi-manually curated database for biologically relevant ligand-protein interactions, Nucleic Acids Research, 41: D1096-D1103 (2013) (download the PDF file).