SEQ2FUN

BioLiP
Download all results in tab-seperated text for 942758 receptor-ligand interactions, whose format is explained at readme.txt.
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    # PDB
    (Resolution Å)
    Site # Ligand EC number GO terms UniProt PubMed Binding
    affinity
    391801 5ot7:L (3.8) BS01 rna ? GO:0000049 ... P80377 29408956
    391802 5ot7:M (3.8) BS01 rna ? GO:0003735 ... P0DOY6 29408956
    391803 5ot7:N (3.8) BS01 rna ? GO:0003735 ... Q5SJ76 29408956
    391804 5ot7:N (3.8) BS02 rna ? GO:0003735 ... Q5SJ76 29408956
    391805 5ot7:O (3.8) BS01 rna ? GO:0003735 ... Q5SJH3 29408956
    391806 5ot7:P (3.8) BS01 rna ? GO:0003735 ... P0DOY7 29408956
    391807 5ot7:Q (3.8) BS01 rna ? GO:0003735 ... Q5SLQ0 29408956
    391808 5ot7:R (3.8) BS01 rna ? GO:0000028 ... Q5SHP2 29408956
    391809 5ot7:S (3.8) BS01 rna ? GO:0003723 ... P80380 29408956
    391810 5ot7:U (3.8) BS01 rna ? GO:0003746 ... Q5SHN5 29408956
    391811 5ot7:U (3.8) BS02 rna ? GO:0003746 ... Q5SHN5 29408956
    391812 5ot7:U (3.8) BS03 GDP ? GO:0003746 ... Q5SHN5 29408956
    391813 5ot7:V (3.8) BS01 rna ? GO:0003735 ... P60493 29408956
    391814 5ot7:V (3.8) BS02 rna ? GO:0003735 ... P60493 29408956
    391815 5ot7:W (3.8) BS01 rna ? GO:0003735 ... P60494 29408956
    391816 5ot7:W (3.8) BS02 rna ? GO:0003735 ... P60494 29408956
    391817 5ot7:X (3.8) BS01 rna ? GO:0003735 ... Q5SHP6 29408956
    391818 5ot7:Y (3.8) BS01 rna ? GO:0003735 ... Q5SHQ6 29408956
    391819 5ot7:Z (3.8) BS01 rna ? GO:0003735 ... Q5SJE1 29408956
    391820 5ot7:Z (3.8) BS02 rna ? GO:0003735 ... Q5SJE1 29408956
    391821 5ot7:a (3.8) BS01 rna ? GO:0003735 ... P80339 29408956
    391822 5ot7:b (3.8) BS01 rna ? GO:0000049 ... P35871 29408956
    391823 5ot7:c (3.8) BS01 rna ? GO:0003735 ... P80340 29408956
    391824 5ot7:d (3.8) BS01 rna ? GO:0003735 ... Q5SKU1 29408956
    391825 5ot7:e (3.8) BS01 rna ? GO:0003735 ... Q5SHR2 29408956
    391826 5ot7:e (3.8) BS02 ZN ? GO:0003735 ... Q5SHR2 29408956
    391827 5ot7:f (3.8) BS01 rna ? GO:0000049 ... Q5SLP7 29408956
    391828 5ot7:f (3.8) BS02 rna ? GO:0000049 ... Q5SLP7 29408956
    391829 5ot7:g (3.8) BS01 rna ? GO:0002181 ... P60405 29408956
    391830 5ot7:h (3.8) BS01 rna ? GO:0003735 ... Q5SHN8 29408956
    391831 5ot7:i (3.8) BS01 rna ? GO:0003735 ... Q5SHN9 29408956
    391832 5ot7:j (3.8) BS01 rna ? GO:0000049 ... Q5SHQ0 29408956
    391833 5ot7:j (3.8) BS02 rna ? GO:0000049 ... Q5SHQ0 29408956
    391834 5ot7:k (3.8) BS01 rna ? GO:0002181 ... P0DOY8 29408956
    391835 5ot7:l (3.8) BS01 rna N/A N/A N/A 29408956
    391836 5ot7:m (3.8) BS01 rna N/A N/A N/A 29408956
    391837 5ot7:o (3.8) BS01 rna ? GO:0003729 ... P60488 29408956
    391838 5ot7:p (3.8) BS01 rna ? GO:0003735 ... Q5SHP8 29408956
    391839 5ot7:p (3.8) BS02 rna ? GO:0003735 ... Q5SHP8 29408956
    391840 5ot7:q (3.8) BS01 rna ? GO:0003735 ... Q5SHQ7 29408956
    391841 5ot7:r (3.8) BS01 rna ? GO:0000049 ... P60489 29408956
    391842 5ot7:r (3.8) BS02 rna ? GO:0000049 ... P60489 29408956
    391843 5ot7:s (3.8) BS01 rna ? GO:0003735 ... Q9Z9H5 29408956
    391844 5ot7:t (3.8) BS01 rna ? GO:0003735 ... Q5SHQ4 29408956
    391845 5ot7:t (3.8) BS02 rna ? GO:0003735 ... Q5SHQ4 29408956
    391846 5ot7:t (3.8) BS03 MG ? GO:0003735 ... Q5SHQ4 29408956
    391847 5ot7:u (3.8) BS01 rna ? GO:0003735 ... P60490 29408956
    391848 5ot7:u (3.8) BS02 rna ? GO:0003735 ... P60490 29408956
    391849 5ot7:v (3.8) BS01 rna ? GO:0000027 ... P60491 29408956
    391850 5ot7:w (3.8) BS01 rna ? GO:0003723 ... P60492 29408956
    391851 5ot7:x (3.8) BS01 rna ? GO:0003735 ... Q5SHP3 29408956
    391852 5ot7:y (3.8) BS01 rna ? GO:0003735 ... Q5SHP0 29408956
    391853 5ot7:z (3.8) BS01 rna ? GO:0003723 ... Q5SHP9 29408956
    391854 5ot7:z (3.8) BS02 MG ? GO:0003723 ... Q5SHP9 29408956
    391855 5ot8:A (2.35) BS01 6DB ? GO:0015276 ... P35120 29269740 MOAD: Kd=52uM
    391856 5ot8:B (2.35) BS01 6DB ? GO:0015276 ... P35120 29269740 MOAD: Kd=52uM
    391857 5ot9:A (2.45) BS01 AOZ ? GO:0015276 ... P35120 29269740 MOAD: Kd=84.4uM
    391858 5ot9:B (2.45) BS01 AOZ ? GO:0015276 ... P35120 29269740 MOAD: Kd=84.4uM
    391859 5ota:A (2.1) BS01 AQQ ? GO:0015276 ... P35120 29269740 MOAD: Kd=4.4uM
    391860 5ota:B (2.1) BS01 AQQ ? GO:0015276 ... P35120 29269740 MOAD: Kd=4.4uM
    391861 5otb:A (2.5) BS01 PRO ? GO:0005576 ... B3VHM9 29095162
    391862 5otb:A (2.5) BS02 PRO ? GO:0005576 ... B3VHM9 29095162
    391863 5otb:B (2.5) BS01 PRO ? GO:0005576 ... B3VHM9 29095162
    391864 5otb:B (2.5) BS02 PRO ? GO:0005576 ... B3VHM9 29095162
    391865 5otb:C (2.5) BS01 PRO ? GO:0005576 ... B3VHM9 29095162
    391866 5otb:C (2.5) BS02 PRO ? GO:0005576 ... B3VHM9 29095162
    391867 5otb:C (2.5) BS03 PRO ? GO:0005576 ... B3VHM9 29095162
    391868 5otb:D (2.5) BS01 PRO ? GO:0005576 ... B3VHM9 29095162
    391869 5otb:D (2.5) BS02 PRO ? GO:0005576 ... B3VHM9 29095162
    391870 5otb:D (2.5) BS03 PRO ? GO:0005576 ... B3VHM9 29095162
    391871 5otc:A (2.2) BS01 AQK ? GO:0015276 ... P35120 29269740 MOAD: Kd=23uM
    391872 5otc:B (2.2) BS01 AQK ? GO:0015276 ... P35120 29269740 MOAD: Kd=23uM
    391873 5otd:A (1.57) BS01 AOW 2.7.11.1 GO:0004672 ... P68400 29732088
    391874 5otd:B (1.57) BS01 AOW 2.7.11.1 GO:0004672 ... P68400 29732088
    391875 5ote:A (1.68) BS01 AQE 2.7.11.1 GO:0004672 ... Q9Y5S2 29382705
    391876 5otf:A (2.0) BS01 AQ5 2.7.11.1 GO:0004672 ... Q9Y5S2 29382705
    391877 5otg:A (1.73) BS01 peptide 2.7.11.11 GO:0000287 ... P25321 N/A
    391878 5otg:A (1.73) BS02 AO8 2.7.11.11 GO:0000287 ... P25321 N/A
    391879 5oth:A (1.69) BS01 AQ8 2.7.11.1 GO:0004672 ... P68400 29732088
    391880 5oth:B (1.69) BS01 AQ8 2.7.11.1 GO:0004672 ... P68400 29732088
    391881 5oti:A (1.59) BS01 AOK 2.7.11.1 GO:0004672 ... P68400 29732088
    391882 5otj:C (2.35) BS01 CA ? GO:0005509 ... O82040 30150373
    391883 5otj:C (2.35) BS02 CA ? GO:0005509 ... O82040 30150373
    391884 5otj:D (2.35) BS01 CA ? GO:0005509 ... O82040 30150373
    391885 5otj:D (2.35) BS02 CA ? GO:0005509 ... O82040 30150373
    391886 5otl:A (1.57) BS01 AQT 2.7.11.1 GO:0004672 ... P68400 29732088
    391887 5otl:B (1.57) BS01 AQT 2.7.11.1 GO:0004672 ... P68400 29732088
    391888 5otm:A (1.8) BS01 6OG 3.6.1.-
    3.6.1.56
    GO:0001669 ... P36639 30304478
    391889 5otm:B (1.8) BS01 6OG 3.6.1.-
    3.6.1.56
    GO:0001669 ... P36639 30304478
    391890 5otn:A (0.99) BS01 6OG 3.6.1.-
    3.6.1.56
    GO:0003723 ... Q7ZWC3 30304478
    391891 5otn:A (0.99) BS02 CA 3.6.1.-
    3.6.1.56
    GO:0003723 ... Q7ZWC3 30304478
    391892 5otn:A (0.99) BS03 CA 3.6.1.-
    3.6.1.56
    GO:0003723 ... Q7ZWC3 30304478
    391893 5oto:A (1.51) BS01 AQW 2.7.11.1 GO:0004672 ... P68400 29732088
    391894 5oto:B (1.51) BS01 AQW 2.7.11.1 GO:0004672 ... P68400 29732088
    391895 5otp:A (1.57) BS01 AT8 2.7.11.1 GO:0004672 ... P68400 29732088
    391896 5otq:A (1.38) BS01 AUH 2.7.11.1 GO:0004672 ... P68400 29732088
    391897 5otq:A (1.38) BS02 AUH 2.7.11.1 GO:0004672 ... P68400 29732088
    391898 5otr:A (1.52) BS01 AU8 2.7.11.1 GO:0004672 ... P68400 29732088
    391899 5otr:A (1.52) BS02 AU8 2.7.11.1 GO:0004672 ... P68400 29732088
    391900 5otr:A (1.52) BS03 ATP 2.7.11.1 GO:0004672 ... P68400 29732088
    391901 5ots:A (1.9) BS01 AU2 2.7.11.1 GO:0004672 ... P68400 29732088
    391902 5ots:A (1.9) BS02 AU2 2.7.11.1 GO:0004672 ... P68400 29732088
    391903 5ots:A (1.9) BS03 AU2 2.7.11.1 GO:0004672 ... P68400 29732088
    391904 5otu:A (1.8) BS01 peptide ? GO:0004930 ... P43220 29877701
    391905 5otu:C (1.8) BS01 peptide ? GO:0004930 ... P43220 29877701
    391906 5otv:A (2.0) BS01 peptide ? GO:0004930 ... P43220 29877701
    391907 5otv:C (2.0) BS01 peptide ? GO:0004930 ... P43220 29877701
    391908 5otw:A (2.1) BS01 peptide ? GO:0004930 ... P43220 29877701
    391909 5otw:C (2.1) BS01 peptide ? GO:0004930 ... P43220 29877701
    391910 5otx:A (2.0) BS01 peptide ? GO:0004930 ... P43220 29877701
    391911 5otx:C (2.0) BS01 peptide ? GO:0004930 ... P43220 29877701
    391912 5oty:A (1.48) BS01 TFA 2.7.11.1 GO:0004672 ... P68400 29732088
    391913 5oty:A (1.48) BS02 AUW 2.7.11.1 GO:0004672 ... P68400 29732088 BindingDB: IC50=7000nM
    391914 5otz:A (1.46) BS01 TFA 2.7.11.1 GO:0004672 ... P68400 29732088
    391915 5otz:A (1.46) BS02 AUT 2.7.11.1 GO:0004672 ... P68400 29732088 MOAD: Kd=6.5uM
    391916 5ou0:A (0.94) BS01 NAP 1.1.1.21
    1.1.1.300
    1.1.1.372
    1.1.1.54
    GO:0001523 ... P15121 29705708
    391917 5ou0:A (0.94) BS02 AV5 1.1.1.21
    1.1.1.300
    1.1.1.372
    1.1.1.54
    GO:0001523 ... P15121 29705708 MOAD: ic50=0.21uM
    391918 5ou1:A (1.78) BS01 IMP 1.1.1.205 GO:0003824 ... G7CNL4 29547284
    391919 5ou1:A (1.78) BS02 AUQ 1.1.1.205 GO:0003824 ... G7CNL4 29547284 MOAD: Ki=0.86uM
    391920 5ou2:A (1.45) BS01 IMP 1.1.1.205 GO:0003824 ... G7CNL4 29547284
    391921 5ou2:A (1.45) BS02 36Y 1.1.1.205 GO:0003824 ... G7CNL4 29547284 MOAD: Ki=609uM
    391922 5ou2:A (1.45) BS03 36Y 1.1.1.205 GO:0003824 ... G7CNL4 29547284 MOAD: Ki=609uM
    391923 5ou3:A (1.6) BS01 IMP 1.1.1.205 GO:0003824 ... G7CNL4 29547284
    391924 5ou3:A (1.6) BS02 AUN 1.1.1.205 GO:0003824 ... G7CNL4 29547284 MOAD: Ki=0.61uM
    391925 5ou8:A (2.5) BS01 peptide ? N/A Q9HCN6 35245360
    391926 5ou8:A (2.5) BS02 peptide ? N/A Q9HCN6 35245360
    391927 5ou8:B (2.5) BS01 peptide ? N/A Q9HCN6 35245360
    391928 5ou8:B (2.5) BS02 peptide ? N/A Q9HCN6 35245360
    391929 5ou9:A (2.5) BS01 peptide ? N/A Q9HCN6 N/A
    391930 5ou9:A (2.5) BS02 peptide ? N/A Q9HCN6 N/A
    391931 5ou9:B (2.5) BS01 peptide ? N/A Q9HCN6 N/A
    391932 5ou9:B (2.5) BS02 peptide ? N/A Q9HCN6 N/A
    391933 5oua:A (1.67) BS01 peptide 2.7.11.11 GO:0000287 ... P25321 N/A
    391934 5ouc:A (1.46) BS01 peptide 2.7.11.11 GO:0000287 ... P25321 N/A
    391935 5ouc:A (1.46) BS02 AO8 2.7.11.11 GO:0000287 ... P25321 N/A
    391936 5oue:A (2.01) BS01 AW5 2.7.11.1 GO:0004672 ... P68400 29732088
    391937 5oue:A (2.01) BS02 AVZ 2.7.11.1 GO:0004672 ... P68400 29732088
    391938 5oue:B (2.01) BS01 AVZ 2.7.11.1 GO:0004672 ... P68400 29732088
    391939 5ouf:A (1.7) BS01 SFG 2.1.1.- GO:0008168 ... A0A2R2JFI5 30151425
    391940 5ouf:A (1.7) BS02 BCT 2.1.1.- GO:0008168 ... A0A2R2JFI5 30151425
    391941 5oug:A (2.57) BS01 L0B N/A GO:0004888 ... N/A 29237730
    391942 5oug:A (2.57) BS02 9Z0 N/A GO:0004888 ... N/A 29237730
    391943 5oug:A (2.57) BS03 9Z0 N/A GO:0004888 ... N/A 29237730
    391944 5oug:A (2.57) BS04 L0B N/A GO:0004888 ... N/A 29237730
    391945 5oug:A (2.57) BS05 9Z0 N/A GO:0004888 ... N/A 29237730
    391946 5oug:B (2.57) BS01 9Z0 N/A GO:0004888 ... N/A 29237730
    391947 5oug:B (2.57) BS02 L0B N/A GO:0004888 ... N/A 29237730
    391948 5oug:B (2.57) BS03 9Z0 N/A GO:0004888 ... N/A 29237730
    391949 5oug:B (2.57) BS04 9Z0 N/A GO:0004888 ... N/A 29237730
    391950 5oug:B (2.57) BS05 L0B N/A GO:0004888 ... N/A 29237730
    391951 5oug:C (2.57) BS01 L0B N/A GO:0004888 ... N/A 29237730
    391952 5oug:C (2.57) BS02 9Z0 N/A GO:0004888 ... N/A 29237730
    391953 5oug:C (2.57) BS03 L0B N/A GO:0004888 ... N/A 29237730
    391954 5oug:D (2.57) BS01 L0B N/A GO:0004888 ... N/A 29237730
    391955 5oug:D (2.57) BS02 9Z0 N/A GO:0004888 ... N/A 29237730
    391956 5oug:D (2.57) BS03 9Z0 N/A GO:0004888 ... N/A 29237730
    391957 5oug:D (2.57) BS04 L0B N/A GO:0004888 ... N/A 29237730
    391958 5oug:E (2.57) BS01 L0B N/A GO:0004888 ... N/A 29237730
    391959 5oug:E (2.57) BS02 9Z0 N/A GO:0004888 ... N/A 29237730
    391960 5oug:E (2.57) BS03 L0B N/A GO:0004888 ... N/A 29237730
    391961 5oug:E (2.57) BS04 9Z0 N/A GO:0004888 ... N/A 29237730
    391962 5oug:E (2.57) BS05 9Z0 N/A GO:0004888 ... N/A 29237730
    391963 5ouh:A (2.5) BS01 L0B N/A GO:0004888 ... N/A 29237730
    391964 5ouh:A (2.5) BS02 L0B N/A GO:0004888 ... N/A 29237730
    391965 5ouh:B (2.5) BS01 L0B N/A GO:0004888 ... N/A 29237730
    391966 5ouh:B (2.5) BS02 L0B N/A GO:0004888 ... N/A 29237730
    391967 5ouh:C (2.5) BS01 L0B N/A GO:0004888 ... N/A 29237730
    391968 5ouh:C (2.5) BS02 L0B N/A GO:0004888 ... N/A 29237730
    391969 5ouh:D (2.5) BS01 L0B N/A GO:0004888 ... N/A 29237730
    391970 5ouh:D (2.5) BS02 L0B N/A GO:0004888 ... N/A 29237730
    391971 5ouh:E (2.5) BS01 L0B N/A GO:0004888 ... N/A 29237730
    391972 5ouh:E (2.5) BS02 L0B N/A GO:0004888 ... N/A 29237730
    391973 5oui:A (3.1) BS01 AVB N/A GO:0004888 ... N/A 29237730
    391974 5ouj:A (0.96) BS01 NAP 1.1.1.21
    1.1.1.300
    1.1.1.372
    1.1.1.54
    GO:0001523 ... P15121 29705708
    391975 5ouj:A (0.96) BS02 AW8 1.1.1.21
    1.1.1.300
    1.1.1.372
    1.1.1.54
    GO:0001523 ... P15121 29705708 MOAD: ic50=0.35uM
    391976 5ouk:A (0.959) BS01 NAP 1.1.1.21
    1.1.1.300
    1.1.1.372
    1.1.1.54
    GO:0001523 ... P15121 29705708
    391977 5ouk:A (0.959) BS02 AVT 1.1.1.21
    1.1.1.300
    1.1.1.372
    1.1.1.54
    GO:0001523 ... P15121 29705708 MOAD: ic50=0.26uM
    391978 5oul:A (1.34) BS01 AWE 2.7.11.1 GO:0004672 ... P68400 29732088
    391979 5oul:A (1.34) BS02 AWE 2.7.11.1 GO:0004672 ... P68400 29732088
    391980 5oul:A (1.34) BS03 AWE 2.7.11.1 GO:0004672 ... P68400 29732088
    391981 5oul:A (1.34) BS04 AWE 2.7.11.1 GO:0004672 ... P68400 29732088
    391982 5oul:A (1.34) BS05 AWE 2.7.11.1 GO:0004672 ... P68400 29732088
    391983 5oul:A (1.34) BS06 AWE 2.7.11.1 GO:0004672 ... P68400 29732088
    391984 5oul:A (1.34) BS07 TFA 2.7.11.1 GO:0004672 ... P68400 29732088
    391985 5oum:A (2.05) BS01 AVK 2.7.11.1 GO:0004672 ... P68400 29732088
    391986 5ouo:A (1.11) BS01 MG ? N/A V5BCL0 29750191
    391987 5ous:A (2.21) BS01 peptide 2.7.11.11 GO:0000287 ... P25321 N/A
    391988 5ouu:A (1.81) BS01 AWN 2.7.11.1 GO:0004672 ... P68400 29732088
    391989 5ouu:B (1.81) BS01 AWN 2.7.11.1 GO:0004672 ... P68400 29732088
    391990 5ov3:B (2.45) BS01 peptide ? GO:0048188 ... Q8BX09 29897600
    391991 5ov5:A (1.81) BS01 DPM 2.5.1.61 GO:0004418 ... Q8GCA8 29095155
    391992 5ov6:A (1.87) BS01 AWQ 2.5.1.61 GO:0004418 ... Q8GCA8 29095155
    391993 5ov7:A (2.402) BS01 GTP 3.6.5.- GO:0000226 ... P81947 28985505
    391994 5ov7:A (2.402) BS02 CA 3.6.5.- GO:0000226 ... P81947 28985505
    391995 5ov7:A (2.402) BS03 6FS 3.6.5.- GO:0000226 ... P81947 28985505
    391996 5ov7:B (2.402) BS01 GDP ? GO:0000226 ... Q6B856 28985505
    391997 5ov7:B (2.402) BS02 6FS ? GO:0000226 ... Q6B856 28985505
    391998 5ov7:C (2.402) BS01 GTP 3.6.5.- GO:0000226 ... P81947 28985505
    391999 5ov7:C (2.402) BS02 6FS 3.6.5.- GO:0000226 ... P81947 28985505
    392000 5ov7:D (2.402) BS01 GDP ? GO:0000226 ... Q6B856 28985505

    Reference:
  • Chengxin Zhang, Xi Zhang, Lydia Freddolino, and Yang Zhang. BioLiP2: an updated structure database for biologically relevent ligand-protein interactions, Nucleic Acids Research, gkad630 (2023).
  • Jianyi Yang, Ambrish Roy, and Yang Zhang. BioLiP: a semi-manually curated database for biologically relevant ligand-protein interactions, Nucleic Acids Research, 41: D1096-D1103 (2013) (download the PDF file).