SEQ2FUN

BioLiP
Download all results in tab-seperated text for 942758 receptor-ligand interactions, whose format is explained at readme.txt.
  • Hover over PDB to view the title of the structure. Click PDB to view the structure at the RCSB PDB database. Resolution -1.00 means the resolution is unavailable, e.g., for NMR structures.
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  • Hover over Ligand to view the full ligand name. Click Ligand to view the 2D diagram and other detail information of the ligand.
  • Hover over EC number to view the full name of enzymatic activity.
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    # PDB
    (Resolution Å)
    Site # Ligand EC number GO terms UniProt PubMed Binding
    affinity
    392201 5oxm:A (2.295) BS19 ASP ? GO:0005886 ... Q5M4H8 29429879
    392202 5oxm:A (2.295) BS20 GLU ? GO:0005886 ... Q5M4H8 29429879
    392203 5oxn:A (2.196) BS01 PO4 ? GO:0005886 ... Q5M4H8 29429879
    392204 5oxn:A (2.196) BS02 PO4 ? GO:0005886 ... Q5M4H8 29429879
    392205 5oxn:A (2.196) BS03 78N ? GO:0005886 ... Q5M4H8 29429879
    392206 5oxn:A (2.196) BS04 78N ? GO:0005886 ... Q5M4H8 29429879
    392207 5oxn:A (2.196) BS05 78N ? GO:0005886 ... Q5M4H8 29429879
    392208 5oxn:A (2.196) BS06 78N ? GO:0005886 ... Q5M4H8 29429879
    392209 5oxn:A (2.196) BS07 78N ? GO:0005886 ... Q5M4H8 29429879
    392210 5oxn:A (2.196) BS08 78N ? GO:0005886 ... Q5M4H8 29429879
    392211 5oxn:A (2.196) BS09 78N ? GO:0005886 ... Q5M4H8 29429879
    392212 5oxn:A (2.196) BS10 78N ? GO:0005886 ... Q5M4H8 29429879
    392213 5oxn:A (2.196) BS11 78N ? GO:0005886 ... Q5M4H8 29429879
    392214 5oxn:A (2.196) BS12 78N ? GO:0005886 ... Q5M4H8 29429879
    392215 5oxn:A (2.196) BS13 PHE ? GO:0005886 ... Q5M4H8 29429879
    392216 5oxn:A (2.196) BS14 ALA ? GO:0005886 ... Q5M4H8 29429879
    392217 5oxo:A (1.95) BS01 78N ? GO:0005886 ... Q5M4H8 29429879
    392218 5oxo:A (1.95) BS02 78N ? GO:0005886 ... Q5M4H8 29429879
    392219 5oxo:A (1.95) BS03 78M ? GO:0005886 ... Q5M4H8 29429879
    392220 5oxo:A (1.95) BS04 78N ? GO:0005886 ... Q5M4H8 29429879
    392221 5oxo:A (1.95) BS05 78N ? GO:0005886 ... Q5M4H8 29429879
    392222 5oxo:A (1.95) BS06 78N ? GO:0005886 ... Q5M4H8 29429879
    392223 5oxo:A (1.95) BS07 78N ? GO:0005886 ... Q5M4H8 29429879
    392224 5oxo:A (1.95) BS08 78N ? GO:0005886 ... Q5M4H8 29429879
    392225 5oxo:A (1.95) BS09 78N ? GO:0005886 ... Q5M4H8 29429879
    392226 5oxo:A (1.95) BS10 78N ? GO:0005886 ... Q5M4H8 29429879
    392227 5oxo:A (1.95) BS11 78M ? GO:0005886 ... Q5M4H8 29429879
    392228 5oxo:A (1.95) BS12 78N ? GO:0005886 ... Q5M4H8 29429879
    392229 5oxo:A (1.95) BS13 78N ? GO:0005886 ... Q5M4H8 29429879
    392230 5oxp:A (2.372) BS01 PO4 ? GO:0005886 ... Q5M4H8 29429879
    392231 5oxp:A (2.372) BS02 PO4 ? GO:0005886 ... Q5M4H8 29429879
    392232 5oxp:A (2.372) BS03 PO4 ? GO:0005886 ... Q5M4H8 29429879
    392233 5oxp:A (2.372) BS04 PO4 ? GO:0005886 ... Q5M4H8 29429879
    392234 5oxp:A (2.372) BS05 78N ? GO:0005886 ... Q5M4H8 29429879
    392235 5oxp:A (2.372) BS06 78N ? GO:0005886 ... Q5M4H8 29429879
    392236 5oxp:A (2.372) BS07 78M ? GO:0005886 ... Q5M4H8 29429879
    392237 5oxp:A (2.372) BS08 78N ? GO:0005886 ... Q5M4H8 29429879
    392238 5oxp:A (2.372) BS09 78N ? GO:0005886 ... Q5M4H8 29429879
    392239 5oxp:A (2.372) BS10 78N ? GO:0005886 ... Q5M4H8 29429879
    392240 5oxp:A (2.372) BS11 78N ? GO:0005886 ... Q5M4H8 29429879
    392241 5oxp:A (2.372) BS12 78N ? GO:0005886 ... Q5M4H8 29429879
    392242 5oxp:A (2.372) BS13 78N ? GO:0005886 ... Q5M4H8 29429879
    392243 5oxp:A (2.372) BS14 78N ? GO:0005886 ... Q5M4H8 29429879
    392244 5oxp:A (2.372) BS15 78M ? GO:0005886 ... Q5M4H8 29429879
    392245 5oxp:A (2.372) BS16 78N ? GO:0005886 ... Q5M4H8 29429879
    392246 5oxp:A (2.372) BS17 78N ? GO:0005886 ... Q5M4H8 29429879
    392247 5oxq:A (2.195) BS01 PO4 ? GO:0005886 ... Q5M4H8 29429879
    392248 5oxq:A (2.195) BS02 PO4 ? GO:0005886 ... Q5M4H8 29429879
    392249 5oxq:A (2.195) BS03 PO4 ? GO:0005886 ... Q5M4H8 29429879
    392250 5oxq:A (2.195) BS04 EPE ? GO:0005886 ... Q5M4H8 29429879
    392251 5oxq:A (2.195) BS05 EPE ? GO:0005886 ... Q5M4H8 29429879
    392252 5oxq:A (2.195) BS06 78N ? GO:0005886 ... Q5M4H8 29429879
    392253 5oxq:A (2.195) BS07 78M ? GO:0005886 ... Q5M4H8 29429879
    392254 5oxq:A (2.195) BS08 78N ? GO:0005886 ... Q5M4H8 29429879
    392255 5oxq:A (2.195) BS09 78M ? GO:0005886 ... Q5M4H8 29429879
    392256 5oxq:A (2.195) BS10 78N ? GO:0005886 ... Q5M4H8 29429879
    392257 5oxq:A (2.195) BS11 78N ? GO:0005886 ... Q5M4H8 29429879
    392258 5oxq:A (2.195) BS12 78N ? GO:0005886 ... Q5M4H8 29429879
    392259 5oxq:A (2.195) BS13 78N ? GO:0005886 ... Q5M4H8 29429879
    392260 5oxq:A (2.195) BS14 78N ? GO:0005886 ... Q5M4H8 29429879
    392261 5oxq:A (2.195) BS15 78N ? GO:0005886 ... Q5M4H8 29429879
    392262 5oxq:A (2.195) BS16 78N ? GO:0005886 ... Q5M4H8 29429879
    392263 5oxr:A (1.75) BS01 CA ? N/A P35247 29912941
    392264 5oxr:A (1.75) BS02 CA ? N/A P35247 29912941
    392265 5oxr:A (1.75) BS03 CA ? N/A P35247 29912941
    392266 5oxr:B (1.75) BS01 K5B ? N/A P35247 29912941
    392267 5oxr:B (1.75) BS02 GMH ? N/A P35247 29912941
    392268 5oxr:B (1.75) BS03 CA ? N/A P35247 29912941
    392269 5oxr:B (1.75) BS04 CA ? N/A P35247 29912941
    392270 5oxr:B (1.75) BS05 CA ? N/A P35247 29912941
    392271 5oxr:C (1.75) BS01 K5B ? N/A P35247 29912941
    392272 5oxr:C (1.75) BS02 GMH ? N/A P35247 29912941
    392273 5oxr:C (1.75) BS03 CA ? N/A P35247 29912941
    392274 5oxr:C (1.75) BS04 CA ? N/A P35247 29912941
    392275 5oxr:C (1.75) BS05 CA ? N/A P35247 29912941
    392276 5oxs:A (1.65) BS01 GLC ? N/A P35247 29912941
    392277 5oxs:A (1.65) BS02 CA ? N/A P35247 29912941
    392278 5oxs:A (1.65) BS03 CA ? N/A P35247 29912941
    392279 5oxs:B (1.65) BS01 K5B ? N/A P35247 29912941
    392280 5oxs:B (1.65) BS02 GMH ? N/A P35247 29912941
    392281 5oxs:B (1.65) BS03 CA ? N/A P35247 29912941
    392282 5oxs:B (1.65) BS04 CA ? N/A P35247 29912941
    392283 5oxs:C (1.65) BS01 K5B ? N/A P35247 29912941
    392284 5oxs:C (1.65) BS02 GMH ? N/A P35247 29912941
    392285 5oxs:C (1.65) BS03 CA ? N/A P35247 29912941
    392286 5oxt:A (1.42) BS01 HEM 1.11.2.1 GO:0004601 ... B9W4V6 30376293
    392287 5oxt:A (1.42) BS02 MG 1.11.2.1 GO:0004601 ... B9W4V6 30376293
    392288 5oxt:B (1.42) BS01 HEM 1.11.2.1 GO:0004601 ... B9W4V6 30376293
    392289 5oxt:B (1.42) BS02 MG 1.11.2.1 GO:0004601 ... B9W4V6 30376293
    392290 5oxt:C (1.42) BS01 HEM 1.11.2.1 GO:0004601 ... B9W4V6 30376293
    392291 5oxt:C (1.42) BS02 MG 1.11.2.1 GO:0004601 ... B9W4V6 30376293
    392292 5oxu:A (1.47) BS01 HEM 1.11.2.1 GO:0004601 ... B9W4V6 30376293
    392293 5oxu:A (1.47) BS02 MG 1.11.2.1 GO:0004601 ... B9W4V6 30376293
    392294 5oxv:A (6.721) BS01 dna ? GO:0000786 ... P84233 28893533
    392295 5oxv:A (6.721) BS02 dna ? GO:0000786 ... P84233 28893533
    392296 5oxv:B (6.721) BS01 dna ? GO:0000786 ... P62799 28893533
    392297 5oxv:B (6.721) BS02 dna ? GO:0000786 ... P62799 28893533
    392298 5oxv:C (6.721) BS01 dna ? GO:0000786 ... P06897 28893533
    392299 5oxv:C (6.721) BS02 dna ? GO:0000786 ... P06897 28893533
    392300 5oxv:D (6.721) BS01 dna ? GO:0000786 ... P02281 28893533
    392301 5oxv:D (6.721) BS02 dna ? GO:0000786 ... P02281 28893533
    392302 5oxv:E (6.721) BS01 dna ? GO:0000786 ... P84233 28893533
    392303 5oxv:E (6.721) BS02 dna ? GO:0000786 ... P84233 28893533
    392304 5oxv:F (6.721) BS01 dna ? GO:0000786 ... P62799 28893533
    392305 5oxv:F (6.721) BS02 dna ? GO:0000786 ... P62799 28893533
    392306 5oxv:G (6.721) BS01 dna ? GO:0000786 ... P06897 28893533
    392307 5oxv:G (6.721) BS02 dna ? GO:0000786 ... P06897 28893533
    392308 5oxv:H (6.721) BS01 dna ? GO:0000786 ... P02281 28893533
    392309 5oxv:H (6.721) BS02 dna ? GO:0000786 ... P02281 28893533
    392310 5oxv:K (6.721) BS01 dna ? GO:0000786 ... P84233 28893533
    392311 5oxv:K (6.721) BS02 dna ? GO:0000786 ... P84233 28893533
    392312 5oxv:L (6.721) BS01 dna ? GO:0000786 ... P62799 28893533
    392313 5oxv:L (6.721) BS02 dna ? GO:0000786 ... P62799 28893533
    392314 5oxv:M (6.721) BS01 dna ? GO:0000786 ... P06897 28893533
    392315 5oxv:M (6.721) BS02 dna ? GO:0000786 ... P06897 28893533
    392316 5oxv:N (6.721) BS01 dna ? GO:0000786 ... P02281 28893533
    392317 5oxv:N (6.721) BS02 dna ? GO:0000786 ... P02281 28893533
    392318 5oxv:O (6.721) BS01 dna ? GO:0000786 ... P84233 28893533
    392319 5oxv:O (6.721) BS02 dna ? GO:0000786 ... P84233 28893533
    392320 5oxv:P (6.721) BS01 dna ? GO:0000786 ... P62799 28893533
    392321 5oxv:P (6.721) BS02 dna ? GO:0000786 ... P62799 28893533
    392322 5oxv:Q (6.721) BS01 dna ? GO:0000786 ... P06897 28893533
    392323 5oxv:Q (6.721) BS02 dna ? GO:0000786 ... P06897 28893533
    392324 5oxv:R (6.721) BS01 dna ? GO:0000786 ... P02281 28893533
    392325 5oxv:R (6.721) BS02 dna ? GO:0000786 ... P02281 28893533
    392326 5oxw:A (2.61) BS01 peptide 2.7.7.7 N/A Q74N74 29754955
    392327 5oxw:B (2.61) BS01 peptide 2.7.7.7 N/A Q74N74 29754955
    392328 5oxw:C (2.61) BS01 peptide 2.7.7.7 N/A Q74N74 29754955
    392329 5oxw:D (2.61) BS01 peptide 2.7.7.7 N/A Q74N74 29754955
    392330 5oxx:A (1.74) BS01 peptide 2.7.7.7 N/A Q74N74 29754955
    392331 5oy0:0 (2.501) BS01 CLA ? GO:0005886 ... P37277 29414678
    392332 5oy0:0 (2.501) BS02 CLA ? GO:0005886 ... P37277 29414678
    392333 5oy0:0 (2.501) BS03 CLA ? GO:0005886 ... P37277 29414678
    392334 5oy0:0 (2.501) BS04 CLA ? GO:0005886 ... P37277 29414678
    392335 5oy0:0 (2.501) BS05 45D ? GO:0005886 ... P37277 29414678
    392336 5oy0:0 (2.501) BS06 CA ? GO:0005886 ... P37277 29414678
    392337 5oy0:0 (2.501) BS07 CLA ? GO:0005886 ... P37277 29414678
    392338 5oy0:0 (2.501) BS08 CLA ? GO:0005886 ... P37277 29414678
    392339 5oy0:0 (2.501) BS09 CLA ? GO:0005886 ... P37277 29414678
    392340 5oy0:1 (2.501) BS01 CLA 1.97.1.12 GO:0000287 ... P29254 29414678
    392341 5oy0:1 (2.501) BS02 CLA 1.97.1.12 GO:0000287 ... P29254 29414678
    392342 5oy0:1 (2.501) BS03 CLA 1.97.1.12 GO:0000287 ... P29254 29414678
    392343 5oy0:1 (2.501) BS04 CLA 1.97.1.12 GO:0000287 ... P29254 29414678
    392344 5oy0:1 (2.501) BS05 CLA 1.97.1.12 GO:0000287 ... P29254 29414678
    392345 5oy0:1 (2.501) BS06 CLA 1.97.1.12 GO:0000287 ... P29254 29414678
    392346 5oy0:1 (2.501) BS07 CLA 1.97.1.12 GO:0000287 ... P29254 29414678
    392347 5oy0:1 (2.501) BS08 CLA 1.97.1.12 GO:0000287 ... P29254 29414678
    392348 5oy0:1 (2.501) BS09 CLA 1.97.1.12 GO:0000287 ... P29254 29414678
    392349 5oy0:1 (2.501) BS10 CLA 1.97.1.12 GO:0000287 ... P29254 29414678
    392350 5oy0:1 (2.501) BS11 CLA 1.97.1.12 GO:0000287 ... P29254 29414678
    392351 5oy0:1 (2.501) BS12 CLA 1.97.1.12 GO:0000287 ... P29254 29414678
    392352 5oy0:1 (2.501) BS13 CLA 1.97.1.12 GO:0000287 ... P29254 29414678
    392353 5oy0:1 (2.501) BS14 CLA 1.97.1.12 GO:0000287 ... P29254 29414678
    392354 5oy0:1 (2.501) BS15 CLA 1.97.1.12 GO:0000287 ... P29254 29414678
    392355 5oy0:1 (2.501) BS16 CLA 1.97.1.12 GO:0000287 ... P29254 29414678
    392356 5oy0:1 (2.501) BS17 CLA 1.97.1.12 GO:0000287 ... P29254 29414678
    392357 5oy0:1 (2.501) BS18 CLA 1.97.1.12 GO:0000287 ... P29254 29414678
    392358 5oy0:1 (2.501) BS19 CLA 1.97.1.12 GO:0000287 ... P29254 29414678
    392359 5oy0:1 (2.501) BS20 CLA 1.97.1.12 GO:0000287 ... P29254 29414678
    392360 5oy0:1 (2.501) BS21 CLA 1.97.1.12 GO:0000287 ... P29254 29414678
    392361 5oy0:1 (2.501) BS22 CLA 1.97.1.12 GO:0000287 ... P29254 29414678
    392362 5oy0:1 (2.501) BS23 CLA 1.97.1.12 GO:0000287 ... P29254 29414678
    392363 5oy0:1 (2.501) BS24 CLA 1.97.1.12 GO:0000287 ... P29254 29414678
    392364 5oy0:1 (2.501) BS25 CLA 1.97.1.12 GO:0000287 ... P29254 29414678
    392365 5oy0:1 (2.501) BS26 CLA 1.97.1.12 GO:0000287 ... P29254 29414678
    392366 5oy0:1 (2.501) BS27 CLA 1.97.1.12 GO:0000287 ... P29254 29414678
    392367 5oy0:1 (2.501) BS28 CLA 1.97.1.12 GO:0000287 ... P29254 29414678
    392368 5oy0:1 (2.501) BS29 CLA 1.97.1.12 GO:0000287 ... P29254 29414678
    392369 5oy0:1 (2.501) BS30 CLA 1.97.1.12 GO:0000287 ... P29254 29414678
    392370 5oy0:1 (2.501) BS31 CLA 1.97.1.12 GO:0000287 ... P29254 29414678
    392371 5oy0:1 (2.501) BS32 CLA 1.97.1.12 GO:0000287 ... P29254 29414678
    392372 5oy0:1 (2.501) BS33 CLA 1.97.1.12 GO:0000287 ... P29254 29414678
    392373 5oy0:1 (2.501) BS34 CLA 1.97.1.12 GO:0000287 ... P29254 29414678
    392374 5oy0:1 (2.501) BS35 CLA 1.97.1.12 GO:0000287 ... P29254 29414678
    392375 5oy0:1 (2.501) BS36 CLA 1.97.1.12 GO:0000287 ... P29254 29414678
    392376 5oy0:1 (2.501) BS37 CLA 1.97.1.12 GO:0000287 ... P29254 29414678
    392377 5oy0:1 (2.501) BS38 CLA 1.97.1.12 GO:0000287 ... P29254 29414678
    392378 5oy0:1 (2.501) BS39 CLA 1.97.1.12 GO:0000287 ... P29254 29414678
    392379 5oy0:1 (2.501) BS40 CLA 1.97.1.12 GO:0000287 ... P29254 29414678
    392380 5oy0:1 (2.501) BS41 PQN 1.97.1.12 GO:0000287 ... P29254 29414678
    392381 5oy0:1 (2.501) BS42 SF4 1.97.1.12 GO:0000287 ... P29254 29414678
    392382 5oy0:1 (2.501) BS43 CLA 1.97.1.12 GO:0000287 ... P29254 29414678
    392383 5oy0:1 (2.501) BS44 CLA 1.97.1.12 GO:0000287 ... P29254 29414678
    392384 5oy0:1 (2.501) BS45 CLA 1.97.1.12 GO:0000287 ... P29254 29414678
    392385 5oy0:1 (2.501) BS46 CLA 1.97.1.12 GO:0000287 ... P29254 29414678
    392386 5oy0:1 (2.501) BS47 CLA 1.97.1.12 GO:0000287 ... P29254 29414678
    392387 5oy0:1 (2.501) BS48 CLA 1.97.1.12 GO:0000287 ... P29254 29414678
    392388 5oy0:1 (2.501) BS49 CLA 1.97.1.12 GO:0000287 ... P29254 29414678
    392389 5oy0:1 (2.501) BS50 CLA 1.97.1.12 GO:0000287 ... P29254 29414678
    392390 5oy0:1 (2.501) BS51 CLA 1.97.1.12 GO:0000287 ... P29254 29414678
    392391 5oy0:1 (2.501) BS52 CLA 1.97.1.12 GO:0000287 ... P29254 29414678
    392392 5oy0:2 (2.501) BS01 CLA 1.97.1.12 GO:0000287 ... P29255 29414678
    392393 5oy0:2 (2.501) BS02 CLA 1.97.1.12 GO:0000287 ... P29255 29414678
    392394 5oy0:2 (2.501) BS03 CLA 1.97.1.12 GO:0000287 ... P29255 29414678
    392395 5oy0:2 (2.501) BS04 SF4 1.97.1.12 GO:0000287 ... P29255 29414678
    392396 5oy0:2 (2.501) BS05 CLA 1.97.1.12 GO:0000287 ... P29255 29414678
    392397 5oy0:2 (2.501) BS06 CLA 1.97.1.12 GO:0000287 ... P29255 29414678
    392398 5oy0:2 (2.501) BS07 CLA 1.97.1.12 GO:0000287 ... P29255 29414678
    392399 5oy0:2 (2.501) BS08 CLA 1.97.1.12 GO:0000287 ... P29255 29414678
    392400 5oy0:2 (2.501) BS09 CLA 1.97.1.12 GO:0000287 ... P29255 29414678

    Reference:
  • Chengxin Zhang, Xi Zhang, Lydia Freddolino, and Yang Zhang. BioLiP2: an updated structure database for biologically relevent ligand-protein interactions, Nucleic Acids Research, gkad630 (2023).
  • Jianyi Yang, Ambrish Roy, and Yang Zhang. BioLiP: a semi-manually curated database for biologically relevant ligand-protein interactions, Nucleic Acids Research, 41: D1096-D1103 (2013) (download the PDF file).