SEQ2FUN

BioLiP
Download all results in tab-seperated text for 942758 receptor-ligand interactions, whose format is explained at readme.txt.
  • Hover over PDB to view the title of the structure. Click PDB to view the structure at the RCSB PDB database. Resolution -1.00 means the resolution is unavailable, e.g., for NMR structures.
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    # PDB
    (Resolution Å)
    Site # Ligand EC number GO terms UniProt PubMed Binding
    affinity
    392801 5oy7:O (5.774) BS02 dna ? GO:0000786 ... P06897 28893533
    392802 5oy7:P (5.774) BS01 dna ? GO:0000786 ... P02281 28893533
    392803 5oy7:P (5.774) BS02 dna ? GO:0000786 ... P02281 28893533
    392804 5oy7:Q (5.774) BS01 dna ? GO:0000786 ... P84233 28893533
    392805 5oy7:Q (5.774) BS02 dna ? GO:0000786 ... P84233 28893533
    392806 5oy7:R (5.774) BS01 dna ? GO:0000786 ... P62799 28893533
    392807 5oy7:R (5.774) BS02 dna ? GO:0000786 ... P62799 28893533
    392808 5oy7:S (5.774) BS01 dna ? GO:0000786 ... P06897 28893533
    392809 5oy7:S (5.774) BS02 dna ? GO:0000786 ... P06897 28893533
    392810 5oy7:T (5.774) BS01 dna ? GO:0000786 ... P02281 28893533
    392811 5oy7:T (5.774) BS02 dna ? GO:0000786 ... P02281 28893533
    392812 5oy7:U (5.774) BS01 dna ? GO:0000786 ... P84233 28893533
    392813 5oy7:U (5.774) BS02 dna ? GO:0000786 ... P84233 28893533
    392814 5oy7:V (5.774) BS01 dna ? GO:0000786 ... P62799 28893533
    392815 5oy7:V (5.774) BS02 dna ? GO:0000786 ... P62799 28893533
    392816 5oy7:W (5.774) BS01 dna ? GO:0000786 ... P06897 28893533
    392817 5oy7:W (5.774) BS02 dna ? GO:0000786 ... P06897 28893533
    392818 5oy7:X (5.774) BS01 dna ? GO:0000786 ... P02281 28893533
    392819 5oy7:X (5.774) BS02 dna ? GO:0000786 ... P02281 28893533
    392820 5oy7:Y (5.774) BS01 dna ? GO:0000786 ... P84233 28893533
    392821 5oy7:Y (5.774) BS02 dna ? GO:0000786 ... P84233 28893533
    392822 5oy7:Z (5.774) BS01 dna ? GO:0000786 ... P62799 28893533
    392823 5oy7:Z (5.774) BS02 dna ? GO:0000786 ... P62799 28893533
    392824 5oy7:a (5.774) BS01 dna ? GO:0000786 ... P06897 28893533
    392825 5oy7:a (5.774) BS02 dna ? GO:0000786 ... P06897 28893533
    392826 5oy7:b (5.774) BS01 dna ? GO:0000786 ... P02281 28893533
    392827 5oy7:b (5.774) BS02 dna ? GO:0000786 ... P02281 28893533
    392828 5oy7:c (5.774) BS01 dna ? GO:0000786 ... P84233 28893533
    392829 5oy7:c (5.774) BS02 dna ? GO:0000786 ... P84233 28893533
    392830 5oy7:d (5.774) BS01 dna ? GO:0000786 ... P62799 28893533
    392831 5oy7:d (5.774) BS02 dna ? GO:0000786 ... P62799 28893533
    392832 5oy7:e (5.774) BS01 dna ? GO:0000786 ... P06897 28893533
    392833 5oy7:e (5.774) BS02 dna ? GO:0000786 ... P06897 28893533
    392834 5oy7:f (5.774) BS01 dna ? GO:0000786 ... P02281 28893533
    392835 5oy7:f (5.774) BS02 dna ? GO:0000786 ... P02281 28893533
    392836 5oy9:D (3.6) BS01 CA ? N/A P01130 29531262
    392837 5oya:A (1.8) BS01 MG 4.1.1.39 GO:0000287 ... A0A3B6UEF4 29925588
    392838 5oya:A (1.8) BS02 CAP 4.1.1.39 GO:0000287 ... A0A3B6UEF4 29925588
    392839 5oya:B (1.8) BS01 MG 4.1.1.39 GO:0000287 ... A0A3B6UEF4 29925588
    392840 5oya:B (1.8) BS02 CAP 4.1.1.39 GO:0000287 ... A0A3B6UEF4 29925588
    392841 5oya:C (1.8) BS01 MG 4.1.1.39 GO:0000287 ... A0A3B6UEF4 29925588
    392842 5oya:C (1.8) BS02 CAP 4.1.1.39 GO:0000287 ... A0A3B6UEF4 29925588
    392843 5oya:D (1.8) BS01 MG 4.1.1.39 GO:0000287 ... A0A3B6UEF4 29925588
    392844 5oya:D (1.8) BS02 CAP 4.1.1.39 GO:0000287 ... A0A3B6UEF4 29925588
    392845 5oya:E (1.8) BS01 MG 4.1.1.39 GO:0000287 ... A0A3B6UEF4 29925588
    392846 5oya:E (1.8) BS02 CAP 4.1.1.39 GO:0000287 ... A0A3B6UEF4 29925588
    392847 5oya:F (1.8) BS01 MG 4.1.1.39 GO:0000287 ... A0A3B6UEF4 29925588
    392848 5oya:F (1.8) BS02 CAP 4.1.1.39 GO:0000287 ... A0A3B6UEF4 29925588
    392849 5oya:G (1.8) BS01 MG 4.1.1.39 GO:0000287 ... A0A3B6UEF4 29925588
    392850 5oya:G (1.8) BS02 CAP 4.1.1.39 GO:0000287 ... A0A3B6UEF4 29925588
    392851 5oya:H (1.8) BS01 MG 4.1.1.39 GO:0000287 ... A0A3B6UEF4 29925588
    392852 5oya:H (1.8) BS02 CAP 4.1.1.39 GO:0000287 ... A0A3B6UEF4 29925588
    392853 5oyb:A (3.75) BS01 CA ? GO:0005229 ... Q8BHY3 29236691
    392854 5oyb:A (3.75) BS02 CA ? GO:0005229 ... Q8BHY3 29236691
    392855 5oyb:B (3.75) BS01 CA ? GO:0005229 ... Q8BHY3 29236691
    392856 5oyb:B (3.75) BS02 CA ? GO:0005229 ... Q8BHY3 29236691
    392857 5oyd:A (2.1) BS01 NBG 3.2.1.4 GO:0000272 ... B3PD52 29467823
    392858 5oyd:A (2.1) BS02 BGC 3.2.1.4 GO:0000272 ... B3PD52 29467823
    392859 5oyd:A (2.1) BS03 BGC 3.2.1.4 GO:0000272 ... B3PD52 29467823
    392860 5oyd:B (2.1) BS01 NBG 3.2.1.4 GO:0000272 ... B3PD52 29467823
    392861 5oyd:B (2.1) BS02 BGC 3.2.1.4 GO:0000272 ... B3PD52 29467823
    392862 5oye:A (1.9) BS01 BGC 3.2.1.4 GO:0000272 ... B3PD52 29467823
    392863 5oye:A (1.9) BS02 BGC 3.2.1.4 GO:0000272 ... B3PD52 29467823
    392864 5oye:A (1.9) BS03 BGC 3.2.1.4 GO:0000272 ... B3PD52 29467823
    392865 5oye:B (1.9) BS01 GAL 3.2.1.4 GO:0000272 ... B3PD52 29467823
    392866 5oye:B (1.9) BS02 BGC 3.2.1.4 GO:0000272 ... B3PD52 29467823
    392867 5oye:B (1.9) BS03 BGC 3.2.1.4 GO:0000272 ... B3PD52 29467823
    392868 5oye:B (1.9) BS04 BGC 3.2.1.4 GO:0000272 ... B3PD52 29467823
    392869 5oyf:A (1.54) BS01 B4Q 2.7.11.1 GO:0004672 ... P68400 29732088
    392870 5oyf:A (1.54) BS02 B4Q 2.7.11.1 GO:0004672 ... P68400 29732088
    392871 5oyh:A (2.249) BS01 T99 ? GO:0009190 ... A0A1Y2HEJ3 29799525
    392872 5oyh:A (2.249) BS02 CA ? GO:0009190 ... A0A1Y2HEJ3 29799525
    392873 5oyh:A (2.249) BS03 T99 ? GO:0009190 ... A0A1Y2HEJ3 29799525
    392874 5oyh:B (2.249) BS01 T99 ? GO:0009190 ... A0A1Y2HEJ3 29799525
    392875 5oyh:B (2.249) BS02 T99 ? GO:0009190 ... A0A1Y2HEJ3 29799525
    392876 5oyh:B (2.249) BS03 CA ? GO:0009190 ... A0A1Y2HEJ3 29799525
    392877 5oyh:C (2.249) BS01 T99 ? GO:0009190 ... A0A1Y2HEJ3 29799525
    392878 5oyh:C (2.249) BS02 CA ? GO:0009190 ... A0A1Y2HEJ3 29799525
    392879 5oyh:C (2.249) BS03 T99 ? GO:0009190 ... A0A1Y2HEJ3 29799525
    392880 5oyh:D (2.249) BS01 T99 ? GO:0009190 ... A0A1Y2HEJ3 29799525
    392881 5oyh:D (2.249) BS02 T99 ? GO:0009190 ... A0A1Y2HEJ3 29799525
    392882 5oyh:D (2.249) BS03 CA ? GO:0009190 ... A0A1Y2HEJ3 29799525
    392883 5oyh:E (2.249) BS01 T99 ? GO:0009190 ... A0A1Y2HEJ3 29799525
    392884 5oyh:E (2.249) BS02 CA ? GO:0009190 ... A0A1Y2HEJ3 29799525
    392885 5oyh:E (2.249) BS03 T99 ? GO:0009190 ... A0A1Y2HEJ3 29799525
    392886 5oyh:F (2.249) BS01 T99 ? GO:0009190 ... A0A1Y2HEJ3 29799525
    392887 5oyh:F (2.249) BS02 T99 ? GO:0009190 ... A0A1Y2HEJ3 29799525
    392888 5oyh:F (2.249) BS03 CA ? GO:0009190 ... A0A1Y2HEJ3 29799525
    392889 5oyh:G (2.249) BS01 T99 ? GO:0009190 ... A0A1Y2HEJ3 29799525
    392890 5oyh:G (2.249) BS02 CA ? GO:0009190 ... A0A1Y2HEJ3 29799525
    392891 5oyh:G (2.249) BS03 T99 ? GO:0009190 ... A0A1Y2HEJ3 29799525
    392892 5oyh:H (2.249) BS01 T99 ? GO:0009190 ... A0A1Y2HEJ3 29799525
    392893 5oyh:H (2.249) BS02 T99 ? GO:0009190 ... A0A1Y2HEJ3 29799525
    392894 5oyh:H (2.249) BS03 CA ? GO:0009190 ... A0A1Y2HEJ3 29799525
    392895 5oyh:I (2.249) BS01 T99 ? GO:0009190 ... A0A1Y2HEJ3 29799525
    392896 5oyh:I (2.249) BS02 CA ? GO:0009190 ... A0A1Y2HEJ3 29799525
    392897 5oyh:I (2.249) BS03 T99 ? GO:0009190 ... A0A1Y2HEJ3 29799525
    392898 5oyh:J (2.249) BS01 T99 ? GO:0009190 ... A0A1Y2HEJ3 29799525
    392899 5oyh:J (2.249) BS02 T99 ? GO:0009190 ... A0A1Y2HEJ3 29799525
    392900 5oyh:J (2.249) BS03 CA ? GO:0009190 ... A0A1Y2HEJ3 29799525
    392901 5oyh:K (2.249) BS01 T99 ? GO:0009190 ... A0A1Y2HEJ3 29799525
    392902 5oyh:K (2.249) BS02 CA ? GO:0009190 ... A0A1Y2HEJ3 29799525
    392903 5oyh:K (2.249) BS03 T99 ? GO:0009190 ... A0A1Y2HEJ3 29799525
    392904 5oyh:L (2.249) BS01 T99 ? GO:0009190 ... A0A1Y2HEJ3 29799525
    392905 5oyh:L (2.249) BS02 T99 ? GO:0009190 ... A0A1Y2HEJ3 29799525
    392906 5oyh:L (2.249) BS03 CA ? GO:0009190 ... A0A1Y2HEJ3 29799525
    392907 5oyh:M (2.249) BS01 T99 ? GO:0009190 ... A0A1Y2HEJ3 29799525
    392908 5oyh:M (2.249) BS02 CA ? GO:0009190 ... A0A1Y2HEJ3 29799525
    392909 5oyh:M (2.249) BS03 T99 ? GO:0009190 ... A0A1Y2HEJ3 29799525
    392910 5oyh:N (2.249) BS01 T99 ? GO:0009190 ... A0A1Y2HEJ3 29799525
    392911 5oyh:N (2.249) BS02 T99 ? GO:0009190 ... A0A1Y2HEJ3 29799525
    392912 5oyh:N (2.249) BS03 CA ? GO:0009190 ... A0A1Y2HEJ3 29799525
    392913 5oyh:O (2.249) BS01 T99 ? GO:0009190 ... A0A1Y2HEJ3 29799525
    392914 5oyh:O (2.249) BS02 CA ? GO:0009190 ... A0A1Y2HEJ3 29799525
    392915 5oyh:O (2.249) BS03 T99 ? GO:0009190 ... A0A1Y2HEJ3 29799525
    392916 5oyh:P (2.249) BS01 T99 ? GO:0009190 ... A0A1Y2HEJ3 29799525
    392917 5oyh:P (2.249) BS02 T99 ? GO:0009190 ... A0A1Y2HEJ3 29799525
    392918 5oyh:P (2.249) BS03 CA ? GO:0009190 ... A0A1Y2HEJ3 29799525
    392919 5oyj:A (2.38) BS01 CA N/A N/A N/A 29502220
    392920 5oyj:B (2.38) BS01 GLC N/A N/A N/A 29502220
    392921 5oyj:C (2.38) BS01 GLC 2.7.10.1 N/A P35968 29502220
    392922 5oyl:A (2.25) BS01 CA ? GO:0019031 ... B7UCZ5 29531262
    392923 5oyl:D (2.25) BS01 CA ? N/A P01130 29531262
    392924 5oyn:A (2.7) BS01 MG 4.2.1.39
    4.2.1.82
    GO:0003824 ... Q9A9Z2 29339766
    392925 5oyn:A (2.7) BS02 FES 4.2.1.39
    4.2.1.82
    GO:0003824 ... Q9A9Z2 29339766
    392926 5oyn:B (2.7) BS01 MG 4.2.1.39
    4.2.1.82
    GO:0003824 ... Q9A9Z2 29339766
    392927 5oyn:B (2.7) BS02 FES 4.2.1.39
    4.2.1.82
    GO:0003824 ... Q9A9Z2 29339766
    392928 5oyn:C (2.7) BS01 MG 4.2.1.39
    4.2.1.82
    GO:0003824 ... Q9A9Z2 29339766
    392929 5oyn:C (2.7) BS02 FES 4.2.1.39
    4.2.1.82
    GO:0003824 ... Q9A9Z2 29339766
    392930 5oyn:D (2.7) BS01 MG 4.2.1.39
    4.2.1.82
    GO:0003824 ... Q9A9Z2 29339766
    392931 5oyn:D (2.7) BS02 FES 4.2.1.39
    4.2.1.82
    GO:0003824 ... Q9A9Z2 29339766
    392932 5oyp:A (3.22) BS01 peptide ? N/A Q9WCE9 29987012
    392933 5oyp:B (3.22) BS01 peptide ? GO:0005198 ... Q6ITS8 29987012
    392934 5oyp:C (3.22) BS01 peptide ? GO:0005198 ... A0A2I6HDZ6 29987012
    392935 5p21:A (1.35) BS01 MG 3.6.5.2 GO:0003924 ... P01112 2196171
    392936 5p21:A (1.35) BS02 GNP 3.6.5.2 GO:0003924 ... P01112 2196171
    392937 5p2p:A (2.4) BS01 CA 3.1.1.4 GO:0002446 ... P00592 2215698
    392938 5p2p:A (2.4) BS02 DHG 3.1.1.4 GO:0002446 ... P00592 2215698
    392939 5p2p:A (2.4) BS03 CA 3.1.1.4 GO:0002446 ... P00592 2215698
    392940 5p2p:B (2.4) BS01 CA 3.1.1.4 GO:0002446 ... P00592 2215698
    392941 5p2p:B (2.4) BS02 CA 3.1.1.4 GO:0002446 ... P00592 2215698
    392942 5p2p:B (2.4) BS03 DHG 3.1.1.4 GO:0002446 ... P00592 2215698
    392943 5p8w:A (2.03) BS01 O01 2.1.1.6 GO:0000287 ... P22734 N/A
    392944 5p8w:B (2.03) BS01 O01 2.1.1.6 GO:0000287 ... P22734 N/A
    392945 5p8w:C (2.03) BS01 O01 2.1.1.6 GO:0000287 ... P22734 N/A
    392946 5p8x:A (1.31) BS01 MG 2.1.1.6 GO:0000287 ... P22734 N/A
    392947 5p8x:A (1.31) BS02 75Z 2.1.1.6 GO:0000287 ... P22734 N/A
    392948 5p8y:A (1.42) BS01 MG 2.1.1.6 GO:0000287 ... P22734 N/A
    392949 5p8y:A (1.42) BS02 763 2.1.1.6 GO:0000287 ... P22734 N/A
    392950 5p8z:A (1.42) BS01 MG 2.1.1.6 GO:0000287 ... P22734 N/A
    392951 5p8z:A (1.42) BS02 766 2.1.1.6 GO:0000287 ... P22734 N/A
    392952 5p90:A (1.24) BS01 MG 2.1.1.6 GO:0000287 ... P22734 N/A
    392953 5p90:A (1.24) BS02 769 2.1.1.6 GO:0000287 ... P22734 N/A
    392954 5p91:A (1.2) BS01 MG 2.1.1.6 GO:0000287 ... P22734 N/A
    392955 5p91:A (1.2) BS02 76B 2.1.1.6 GO:0000287 ... P22734 N/A
    392956 5p92:A (1.61) BS01 MG 2.1.1.6 GO:0000287 ... P22734 N/A
    392957 5p92:A (1.61) BS02 76G 2.1.1.6 GO:0000287 ... P22734 N/A
    392958 5p93:A (1.24) BS01 MG 2.1.1.6 GO:0000287 ... P22734 N/A
    392959 5p93:A (1.24) BS02 76S 2.1.1.6 GO:0000287 ... P22734 N/A
    392960 5p94:A (1.2) BS01 MG 2.1.1.6 GO:0000287 ... P22734 N/A
    392961 5p94:A (1.2) BS02 76T 2.1.1.6 GO:0000287 ... P22734 N/A
    392962 5p95:A (1.3) BS01 MG 2.1.1.6 GO:0000287 ... P22734 N/A
    392963 5p95:A (1.3) BS02 77G 2.1.1.6 GO:0000287 ... P22734 N/A
    392964 5p96:A (1.4) BS01 MG 2.1.1.6 GO:0000287 ... P22734 N/A
    392965 5p96:A (1.4) BS02 77H 2.1.1.6 GO:0000287 ... P22734 N/A
    392966 5p97:A (1.3) BS01 MG 2.1.1.6 GO:0000287 ... P22734 N/A
    392967 5p97:A (1.3) BS02 77K 2.1.1.6 GO:0000287 ... P22734 N/A
    392968 5p98:A (1.2) BS01 MG 2.1.1.6 GO:0000287 ... P22734 N/A
    392969 5p98:A (1.2) BS02 77L 2.1.1.6 GO:0000287 ... P22734 N/A
    392970 5p99:A (1.2) BS01 MG 2.1.1.6 GO:0000287 ... P22734 N/A
    392971 5p99:A (1.2) BS02 77M 2.1.1.6 GO:0000287 ... P22734 N/A
    392972 5p9a:A (1.91) BS01 MG 2.1.1.6 GO:0000287 ... P22734 N/A
    392973 5p9a:A (1.91) BS02 77N 2.1.1.6 GO:0000287 ... P22734 N/A
    392974 5p9b:A (1.45) BS01 MG 2.1.1.6 GO:0000287 ... P22734 N/A
    392975 5p9b:A (1.45) BS02 77P 2.1.1.6 GO:0000287 ... P22734 N/A
    392976 5p9c:A (1.7) BS01 MG 2.1.1.6 GO:0000287 ... P22734 N/A
    392977 5p9c:A (1.7) BS02 77Q 2.1.1.6 GO:0000287 ... P22734 N/A
    392978 5p9d:A (1.42) BS01 MG 2.1.1.6 GO:0000287 ... P22734 N/A
    392979 5p9d:A (1.42) BS02 77R 2.1.1.6 GO:0000287 ... P22734 N/A
    392980 5p9e:A (1.5) BS01 MG 2.1.1.6 GO:0000287 ... P22734 N/A
    392981 5p9e:A (1.5) BS02 77S 2.1.1.6 GO:0000287 ... P22734 N/A
    392982 5p9f:A (1.71) BS01 2VL 2.7.10.2 GO:0004672 ... Q06187 28062735 BindingDB: IC50=6.0nM, EC50=380nM
    392983 5p9g:A (1.75) BS01 7G6 2.7.10.2 GO:0004672 ... Q06187 28062735 BindingDB: IC50=13nM
    392984 5p9h:A (1.95) BS01 7G7 2.7.10.2 GO:0004672 ... Q06187 28062735
    392985 5p9i:A (1.11) BS01 1E8 2.7.10.2 GO:0004672 ... Q06187 28062735 BindingDB: IC50=14nM, Kd=1.9nM, Ki=4.8nM
    392986 5p9j:A (1.08) BS01 8E8 2.7.10.2 GO:0004672 ... Q06187 28062735
    392987 5p9k:A (1.28) BS01 7G8 2.7.10.2 GO:0004672 ... Q06187 28062735
    392988 5p9l:A (1.25) BS01 7G9 2.7.10.2 GO:0004672 ... Q06187 28062735
    392989 5p9m:A (1.41) BS01 7GB 2.7.10.2 GO:0004672 ... Q06187 28062735
    392990 5p9n:A (1.17) BS01 MG 2.1.1.6 GO:0000287 ... P22734 N/A
    392991 5p9n:A (1.17) BS02 7JE 2.1.1.6 GO:0000287 ... P22734 N/A
    392992 5p9n:A (1.17) BS03 8JE 2.1.1.6 GO:0000287 ... P22734 N/A
    392993 5p9o:A (1.1) BS01 7JF 2.1.1.6 GO:0000287 ... P22734 N/A
    392994 5p9o:A (1.1) BS02 SAH 2.1.1.6 GO:0000287 ... P22734 N/A
    392995 5p9o:A (1.1) BS03 MG 2.1.1.6 GO:0000287 ... P22734 N/A
    392996 5p9p:A (1.12) BS01 MG 2.1.1.6 GO:0000287 ... P22734 N/A
    392997 5p9p:A (1.12) BS02 SAH 2.1.1.6 GO:0000287 ... P22734 N/A
    392998 5p9p:A (1.12) BS03 7JG 2.1.1.6 GO:0000287 ... P22734 N/A
    392999 5p9q:A (1.63) BS01 MG 2.1.1.6 GO:0000287 ... P22734 N/A
    393000 5p9q:A (1.63) BS02 SAH 2.1.1.6 GO:0000287 ... P22734 N/A

    Reference:
  • Chengxin Zhang, Xi Zhang, Lydia Freddolino, and Yang Zhang. BioLiP2: an updated structure database for biologically relevent ligand-protein interactions, Nucleic Acids Research, gkad630 (2023).
  • Jianyi Yang, Ambrish Roy, and Yang Zhang. BioLiP: a semi-manually curated database for biologically relevant ligand-protein interactions, Nucleic Acids Research, 41: D1096-D1103 (2013) (download the PDF file).