SEQ2FUN

BioLiP
Download all results in tab-seperated text for 1072681 receptor-ligand interactions, whose format is explained at readme.txt.
  • Hover over PDB to view the title of the structure. Click PDB to view the structure at the RCSB PDB database. Resolution -1.00 means the resolution is unavailable, e.g., for NMR structures.
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    # PDB
    (Resolution Å)     		Site # Ligand EC number GO terms UniProt PubMed Binding
    affinity
    39201 1ogy:A (3.2) BS04 HEC 1.9.6.1 GO:0005506 ... Q53176 14528294
    39202 1ogy:B (3.2) BS01 HEC ? GO:0009061 ... Q53177 14528294
    39203 1ogy:B (3.2) BS02 HEC ? GO:0009061 ... Q53177 14528294
    39204 1ogy:C (3.2) BS01 SF4 1.9.6.1 GO:0005506 ... Q53176 14528294
    39205 1ogy:C (3.2) BS02 MO 1.9.6.1 GO:0005506 ... Q53176 14528294
    39206 1ogy:C (3.2) BS03 MGD 1.9.6.1 GO:0005506 ... Q53176 14528294
    39207 1ogy:C (3.2) BS04 MGD 1.9.6.1 GO:0005506 ... Q53176 14528294
    39208 1ogy:C (3.2) BS05 HEC 1.9.6.1 GO:0005506 ... Q53176 14528294
    39209 1ogy:D (3.2) BS01 HEC ? GO:0009061 ... Q53177 14528294
    39210 1ogy:D (3.2) BS02 HEC ? GO:0009061 ... Q53177 14528294
    39211 1ogy:D (3.2) BS03 HEC ? GO:0009061 ... Q53177 14528294
    39212 1ogy:E (3.2) BS01 SF4 1.9.6.1 GO:0005506 ... Q53176 14528294
    39213 1ogy:E (3.2) BS02 MGD 1.9.6.1 GO:0005506 ... Q53176 14528294
    39214 1ogy:E (3.2) BS03 MGD 1.9.6.1 GO:0005506 ... Q53176 14528294
    39215 1ogy:F (3.2) BS01 HEC ? GO:0009061 ... Q53177 14528294
    39216 1ogy:F (3.2) BS02 HEC ? GO:0009061 ... Q53177 14528294
    39217 1ogy:G (3.2) BS01 SF4 1.9.6.1 GO:0005506 ... Q53176 14528294
    39218 1ogy:G (3.2) BS02 MGD 1.9.6.1 GO:0005506 ... Q53176 14528294
    39219 1ogy:G (3.2) BS03 MGD 1.9.6.1 GO:0005506 ... Q53176 14528294
    39220 1ogy:H (3.2) BS01 HEC ? GO:0009061 ... Q53177 14528294
    39221 1ogy:H (3.2) BS02 HEC ? GO:0009061 ... Q53177 14528294
    39222 1ogy:I (3.2) BS01 SF4 1.9.6.1 GO:0005506 ... Q53176 14528294
    39223 1ogy:I (3.2) BS02 MO 1.9.6.1 GO:0005506 ... Q53176 14528294
    39224 1ogy:I (3.2) BS03 MGD 1.9.6.1 GO:0005506 ... Q53176 14528294
    39225 1ogy:I (3.2) BS04 MGD 1.9.6.1 GO:0005506 ... Q53176 14528294
    39226 1ogy:I (3.2) BS05 HEC 1.9.6.1 GO:0005506 ... Q53176 14528294
    39227 1ogy:J (3.2) BS01 HEC ? GO:0009061 ... Q53177 14528294
    39228 1ogy:J (3.2) BS02 HEC ? GO:0009061 ... Q53177 14528294
    39229 1ogy:K (3.2) BS01 SF4 1.9.6.1 GO:0005506 ... Q53176 14528294
    39230 1ogy:K (3.2) BS02 MO 1.9.6.1 GO:0005506 ... Q53176 14528294
    39231 1ogy:K (3.2) BS03 MGD 1.9.6.1 GO:0005506 ... Q53176 14528294
    39232 1ogy:K (3.2) BS04 MGD 1.9.6.1 GO:0005506 ... Q53176 14528294
    39233 1ogy:K (3.2) BS05 HEC 1.9.6.1 GO:0005506 ... Q53176 14528294
    39234 1ogy:L (3.2) BS01 HEC ? GO:0009061 ... Q53177 14528294
    39235 1ogy:L (3.2) BS02 HEC ? GO:0009061 ... Q53177 14528294
    39236 1ogy:M (3.2) BS01 SF4 1.9.6.1 GO:0005506 ... Q53176 14528294
    39237 1ogy:M (3.2) BS02 MGD 1.9.6.1 GO:0005506 ... Q53176 14528294
    39238 1ogy:M (3.2) BS03 MGD 1.9.6.1 GO:0005506 ... Q53176 14528294
    39239 1ogy:M (3.2) BS04 HEC 1.9.6.1 GO:0005506 ... Q53176 14528294
    39240 1ogy:N (3.2) BS01 HEC ? GO:0009061 ... Q53177 14528294
    39241 1ogy:N (3.2) BS02 HEC ? GO:0009061 ... Q53177 14528294
    39242 1ogy:O (3.2) BS01 SF4 1.9.6.1 GO:0005506 ... Q53176 14528294
    39243 1ogy:O (3.2) BS02 MO 1.9.6.1 GO:0005506 ... Q53176 14528294
    39244 1ogy:O (3.2) BS03 MGD 1.9.6.1 GO:0005506 ... Q53176 14528294
    39245 1ogy:O (3.2) BS04 MGD 1.9.6.1 GO:0005506 ... Q53176 14528294
    39246 1ogy:O (3.2) BS05 HEC 1.9.6.1 GO:0005506 ... Q53176 14528294
    39247 1ogy:P (3.2) BS01 HEC ? GO:0009061 ... Q53177 14528294
    39248 1ogy:P (3.2) BS02 HEC ? GO:0009061 ... Q53177 14528294
    39249 1ogz:A (2.3) BS01 EQU 5.3.3.1 GO:0004769 ... P00947 12852789 MOAD: Kd=1.4uM
    39250 1oh0:A (1.1) BS01 EQU 5.3.3.1 GO:0004769 ... P07445 9369474
    39251 1oh0:B (1.1) BS01 EQU 5.3.3.1 GO:0004769 ... P07445 9369474
    39252 1oh2:P (2.4) BS01 GLC ? GO:0015288 ... P22340 N/A
    39253 1oh2:P (2.4) BS02 FRU ? GO:0015288 ... P22340 N/A
    39254 1oh2:P (2.4) BS03 GLC ? GO:0015288 ... P22340 N/A
    39255 1oh2:P (2.4) BS04 CA ? GO:0015288 ... P22340 N/A
    39256 1oh2:Q (2.4) BS01 GLC ? GO:0015288 ... P22340 N/A
    39257 1oh2:Q (2.4) BS02 FRU ? GO:0015288 ... P22340 N/A
    39258 1oh2:Q (2.4) BS03 GLC ? GO:0015288 ... P22340 N/A
    39259 1oh2:Q (2.4) BS04 CA ? GO:0015288 ... P22340 N/A
    39260 1oh2:R (2.4) BS01 GLC ? GO:0015288 ... P22340 N/A
    39261 1oh2:R (2.4) BS02 FRU ? GO:0015288 ... P22340 N/A
    39262 1oh2:R (2.4) BS03 GLC ? GO:0015288 ... P22340 N/A
    39263 1oh2:R (2.4) BS04 CA ? GO:0015288 ... P22340 N/A
    39264 1oh3:A (1.5) BS01 BGC ? N/A Q9C171 15003456
    39265 1oh3:A (1.5) BS02 BGC ? N/A Q9C171 15003456
    39266 1oh3:A (1.5) BS03 BGC ? N/A Q9C171 15003456
    39267 1oh3:B (1.5) BS01 BGC ? N/A Q9C171 15003456
    39268 1oh3:B (1.5) BS02 BGC ? N/A Q9C171 15003456
    39269 1oh4:A (1.35) BS01 BMA ? N/A Q9RIK9 12791255
    39270 1oh4:A (1.35) BS02 BMA ? N/A Q9RIK9 12791255
    39271 1oh4:A (1.35) BS03 BMA ? N/A Q9RIK9 12791255
    39272 1oh4:A (1.35) BS04 BMA ? N/A Q9RIK9 12791255
    39273 1oh4:A (1.35) BS05 CA ? N/A Q9RIK9 12791255
    39274 1oh5:A (2.9) BS01 dna ? GO:0000018 ... P23909 12907723
    39275 1oh5:A (2.9) BS02 dna ? GO:0000018 ... P23909 12907723
    39276 1oh5:A (2.9) BS03 ADP ? GO:0000018 ... P23909 12907723
    39277 1oh5:B (2.9) BS01 dna ? GO:0000018 ... P23909 12907723
    39278 1oh6:A (2.4) BS01 dna ? GO:0000018 ... P23909 12907723
    39279 1oh6:A (2.4) BS02 dna ? GO:0000018 ... P23909 12907723
    39280 1oh6:A (2.4) BS03 ADP ? GO:0000018 ... P23909 12907723
    39281 1oh6:B (2.4) BS01 dna ? GO:0000018 ... P23909 12907723
    39282 1oh6:B (2.4) BS02 dna ? GO:0000018 ... P23909 12907723
    39283 1oh7:A (2.5) BS01 dna ? GO:0000018 ... P23909 12907723
    39284 1oh7:A (2.5) BS02 dna ? GO:0000018 ... P23909 12907723
    39285 1oh7:A (2.5) BS03 ADP ? GO:0000018 ... P23909 12907723
    39286 1oh7:B (2.5) BS01 dna ? GO:0000018 ... P23909 12907723
    39287 1oh7:B (2.5) BS02 dna ? GO:0000018 ... P23909 12907723
    39288 1oh8:A (2.9) BS01 dna ? GO:0000018 ... P23909 12907723
    39289 1oh8:A (2.9) BS02 dna ? GO:0000018 ... P23909 12907723
    39290 1oh8:A (2.9) BS03 ADP ? GO:0000018 ... P23909 12907723
    39291 1oh8:B (2.9) BS01 dna ? GO:0000018 ... P23909 12907723
    39292 1oh9:A (1.91) BS01 ADP 2.7.2.8 GO:0003991 ... P0A6C8 12875848
    39293 1oh9:A (1.91) BS02 NLG 2.7.2.8 GO:0003991 ... P0A6C8 12875848
    39294 1oh9:A (1.91) BS03 ALF 2.7.2.8 GO:0003991 ... P0A6C8 12875848
    39295 1oha:A (1.9) BS01 ADP 2.7.2.8 GO:0003991 ... P0A6C8 12875848
    39296 1oha:A (1.9) BS02 NLG 2.7.2.8 GO:0003991 ... P0A6C8 12875848
    39297 1ohb:A (1.9) BS01 ADP 2.7.2.8 GO:0003991 ... P0A6C8 12875848
    39298 1ohd:A (2.6) BS01 WO4 3.1.3.16
    3.1.3.48    		 GO:0006470 ... O60729 12853468
    39299 1ohe:A (2.2) BS01 peptide 3.1.3.16
    3.1.3.48    		 GO:0006470 ... O60729 12853468
    39300 1ohf:A (2.8) BS01 MG ? N/A Q4TVT6 14972547
    39301 1ohf:B (2.8) BS01 MG ? N/A Q4TVT6 14972547
    39302 1ohf:C (2.8) BS01 MG ? N/A Q4TVT6 14972547
    39303 1ohf:D (2.8) BS01 MG ? N/A Q4TVT6 14972547
    39304 1ohh:A (2.8) BS01 ANP ? GO:0005515 ... P19483 12923572
    39305 1ohh:B (2.8) BS01 ANP ? GO:0005515 ... P19483 12923572
    39306 1ohh:B (2.8) BS02 ANP ? GO:0005515 ... P19483 12923572
    39307 1ohh:C (2.8) BS01 ANP ? GO:0005515 ... P19483 12923572
    39308 1ohh:D (2.8) BS01 ANP 7.1.2.2 GO:0005515 ... P00829 12923572
    39309 1ohh:F (2.8) BS01 ANP 7.1.2.2 GO:0005515 ... P00829 12923572
    39310 1ohh:F (2.8) BS02 MG 7.1.2.2 GO:0005515 ... P00829 12923572
    39311 1ohj:A (2.5) BS01 NDP 1.5.1.3 GO:0000900 ... P00374 9374868
    39312 1ohj:A (2.5) BS02 COP 1.5.1.3 GO:0000900 ... P00374 9374868 BindingDB: IC50=12nM, Ki=0.350000nM
    39313 1ohk:A (2.5) BS01 NDP 1.5.1.3 GO:0000900 ... P00374 9374868
    39314 1ohk:A (2.5) BS02 COP 1.5.1.3 GO:0000900 ... P00374 9374868 BindingDB: IC50=12nM, Ki=0.350000nM
    39315 1ohl:A (1.6) BS01 ZN 4.2.1.24 GO:0004655 ... P05373 12777167
    39316 1ohl:A (1.6) BS02 PBG 4.2.1.24 GO:0004655 ... P05373 12777167
    39317 1oho:A (1.9) BS01 EQU 5.3.3.1 GO:0004769 ... P07445 N/A
    39318 1ohp:A (1.53) BS01 ESR 5.3.3.1 GO:0004769 ... P00947 N/A
    39319 1ohp:B (1.53) BS01 ESR 5.3.3.1 GO:0004769 ... P00947 N/A
    39320 1ohp:C (1.53) BS01 ESR 5.3.3.1 GO:0004769 ... P00947 N/A
    39321 1ohp:D (1.53) BS01 ESR 5.3.3.1 GO:0004769 ... P00947 N/A
    39322 1ohr:A (2.1) BS01 1UN ? GO:0004190 ... Q9Q288 9397180 MOAD: Ki=2nM
    39323 1ohr:B (2.1) BS01 1UN ? GO:0004190 ... Q9Q288 9397180
    39324 1ohs:A (1.7) BS01 5SD 5.3.3.1 GO:0004769 ... P00947 N/A
    39325 1ohs:B (1.7) BS01 5SD 5.3.3.1 GO:0004769 ... P00947 N/A
    39326 1ohs:C (1.7) BS01 5SD 5.3.3.1 GO:0004769 ... P00947 N/A
    39327 1oht:A (2.0) BS01 ZN 3.5.1.28 GO:0002814 ... Q8INK6 12845326
    39328 1ohv:A (2.3) BS01 PLP 2.6.1.19
    2.6.1.22    		 GO:0005739 ... P80147 14534310
    39329 1ohv:A (2.3) BS02 FES 2.6.1.19
    2.6.1.22    		 GO:0005739 ... P80147 14534310
    39330 1ohv:B (2.3) BS01 FES 2.6.1.19
    2.6.1.22    		 GO:0005739 ... P80147 14534310
    39331 1ohv:B (2.3) BS02 PLP 2.6.1.19
    2.6.1.22    		 GO:0005739 ... P80147 14534310
    39332 1ohv:C (2.3) BS01 PLP 2.6.1.19
    2.6.1.22    		 GO:0005739 ... P80147 14534310
    39333 1ohv:C (2.3) BS02 FES 2.6.1.19
    2.6.1.22    		 GO:0005739 ... P80147 14534310
    39334 1ohv:D (2.3) BS01 FES 2.6.1.19
    2.6.1.22    		 GO:0005739 ... P80147 14534310
    39335 1ohv:D (2.3) BS02 PLP 2.6.1.19
    2.6.1.22    		 GO:0005739 ... P80147 14534310
    39336 1ohw:A (2.3) BS01 PLP 2.6.1.19
    2.6.1.22    		 GO:0005739 ... P80147 14534310
    39337 1ohw:A (2.3) BS02 VIG 2.6.1.19
    2.6.1.22    		 GO:0005739 ... P80147 14534310
    39338 1ohw:A (2.3) BS03 FES 2.6.1.19
    2.6.1.22    		 GO:0005739 ... P80147 14534310
    39339 1ohw:A (2.3) BS04 VIG 2.6.1.19
    2.6.1.22    		 GO:0005739 ... P80147 14534310
    39340 1ohw:B (2.3) BS01 VIG 2.6.1.19
    2.6.1.22    		 GO:0005739 ... P80147 14534310
    39341 1ohw:B (2.3) BS02 FES 2.6.1.19
    2.6.1.22    		 GO:0005739 ... P80147 14534310
    39342 1ohw:B (2.3) BS03 PLP 2.6.1.19
    2.6.1.22    		 GO:0005739 ... P80147 14534310
    39343 1ohw:B (2.3) BS04 VIG 2.6.1.19
    2.6.1.22    		 GO:0005739 ... P80147 14534310
    39344 1ohw:C (2.3) BS01 PLP 2.6.1.19
    2.6.1.22    		 GO:0005739 ... P80147 14534310
    39345 1ohw:C (2.3) BS02 VIG 2.6.1.19
    2.6.1.22    		 GO:0005739 ... P80147 14534310
    39346 1ohw:C (2.3) BS03 FES 2.6.1.19
    2.6.1.22    		 GO:0005739 ... P80147 14534310
    39347 1ohw:D (2.3) BS01 VIG 2.6.1.19
    2.6.1.22    		 GO:0005739 ... P80147 14534310
    39348 1ohw:D (2.3) BS02 FES 2.6.1.19
    2.6.1.22    		 GO:0005739 ... P80147 14534310
    39349 1ohw:D (2.3) BS03 PLP 2.6.1.19
    2.6.1.22    		 GO:0005739 ... P80147 14534310
    39350 1ohw:D (2.3) BS04 VIG 2.6.1.19
    2.6.1.22    		 GO:0005739 ... P80147 14534310
    39351 1ohy:A (2.8) BS01 PLP 2.6.1.19
    2.6.1.22    		 GO:0005739 ... P80147 14534310
    39352 1ohy:A (2.8) BS02 GEG 2.6.1.19
    2.6.1.22    		 GO:0005739 ... P80147 14534310
    39353 1ohy:A (2.8) BS03 FES 2.6.1.19
    2.6.1.22    		 GO:0005739 ... P80147 14534310
    39354 1ohy:A (2.8) BS04 GEG 2.6.1.19
    2.6.1.22    		 GO:0005739 ... P80147 14534310
    39355 1ohy:B (2.8) BS01 GEG 2.6.1.19
    2.6.1.22    		 GO:0005739 ... P80147 14534310
    39356 1ohy:B (2.8) BS02 FES 2.6.1.19
    2.6.1.22    		 GO:0005739 ... P80147 14534310
    39357 1ohy:B (2.8) BS03 PLP 2.6.1.19
    2.6.1.22    		 GO:0005739 ... P80147 14534310
    39358 1ohy:B (2.8) BS04 GEG 2.6.1.19
    2.6.1.22    		 GO:0005739 ... P80147 14534310
    39359 1ohy:C (2.8) BS01 PLP 2.6.1.19
    2.6.1.22    		 GO:0005739 ... P80147 14534310
    39360 1ohy:C (2.8) BS02 GEG 2.6.1.19
    2.6.1.22    		 GO:0005739 ... P80147 14534310
    39361 1ohy:C (2.8) BS03 FES 2.6.1.19
    2.6.1.22    		 GO:0005739 ... P80147 14534310
    39362 1ohy:C (2.8) BS04 GEG 2.6.1.19
    2.6.1.22    		 GO:0005739 ... P80147 14534310
    39363 1ohy:D (2.8) BS01 GEG 2.6.1.19
    2.6.1.22    		 GO:0005739 ... P80147 14534310
    39364 1ohy:D (2.8) BS02 FES 2.6.1.19
    2.6.1.22    		 GO:0005739 ... P80147 14534310
    39365 1ohy:D (2.8) BS03 PLP 2.6.1.19
    2.6.1.22    		 GO:0005739 ... P80147 14534310
    39366 1ohy:D (2.8) BS04 GEG 2.6.1.19
    2.6.1.22    		 GO:0005739 ... P80147 14534310
    39367 1ohz:B (2.2) BS01 CA 3.2.1.8 GO:0000272 ... P51584 14623971
    39368 1ohz:B (2.2) BS02 CA 3.2.1.8 GO:0000272 ... P51584 14623971
    39369 1oi0:A (1.5) BS01 ZN ? N/A O28085 14516197
    39370 1oi0:B (1.5) BS01 ZN ? N/A O28085 14516197
    39371 1oi0:C (1.5) BS01 ZN ? N/A O28085 14516197
    39372 1oi0:D (1.5) BS01 ZN ? N/A O28085 14516197
    39373 1oi6:A (1.4) BS01 TMP ? GO:0000271 ... O52806 15159413
    39374 1oi6:A (1.4) BS02 TMP ? GO:0000271 ... O52806 15159413
    39375 1oi6:B (1.4) BS01 TMP ? GO:0000271 ... O52806 15159413
    39376 1oi8:A (2.1) BS01 MN 3.1.3.5
    3.6.1.45    		 GO:0000166 ... P07024 15215524
    39377 1oi8:A (2.1) BS02 MN 3.1.3.5
    3.6.1.45    		 GO:0000166 ... P07024 15215524
    39378 1oi8:A (2.1) BS03 CO3 3.1.3.5
    3.6.1.45    		 GO:0000166 ... P07024 15215524
    39379 1oi8:B (2.1) BS01 MN 3.1.3.5
    3.6.1.45    		 GO:0000166 ... P07024 15215524
    39380 1oi8:B (2.1) BS02 MN 3.1.3.5
    3.6.1.45    		 GO:0000166 ... P07024 15215524
    39381 1oi8:B (2.1) BS03 CO3 3.1.3.5
    3.6.1.45    		 GO:0000166 ... P07024 15215524
    39382 1oi9:A (2.1) BS01 N20 2.7.11.22 GO:0000082 ... P24941 15239650 MOAD: ic50=69nM
    BindingDB: IC50=69nM
    39383 1oi9:B (2.1) BS01 MG ? GO:0016538 ... P20248 15239650
    39384 1oi9:C (2.1) BS01 N20 2.7.11.22 GO:0000082 ... P24941 15239650 MOAD: ic50=69nM
    BindingDB: IC50=69nM
    39385 1oif:A (2.12) BS01 IFM 3.2.1.21 GO:0004553 ... Q08638 14624580 MOAD: Ka=51450000M^-1
    39386 1oif:B (2.12) BS01 IFM 3.2.1.21 GO:0004553 ... Q08638 14624580 MOAD: Ka=51450000M^-1
    39387 1oii:A (2.19) BS01 FE2 1.14.11.77 GO:0005737 ... Q9WWU5 15023059
    39388 1oii:A (2.19) BS02 AKG 1.14.11.77 GO:0005737 ... Q9WWU5 15023059
    39389 1oii:B (2.19) BS01 FE2 1.14.11.77 GO:0005737 ... Q9WWU5 15023059
    39390 1oii:B (2.19) BS02 AKG 1.14.11.77 GO:0005737 ... Q9WWU5 15023059
    39391 1oii:C (2.19) BS01 FE2 1.14.11.77 GO:0005737 ... Q9WWU5 15023059
    39392 1oii:C (2.19) BS02 AKG 1.14.11.77 GO:0005737 ... Q9WWU5 15023059
    39393 1oii:D (2.19) BS01 FE2 1.14.11.77 GO:0005737 ... Q9WWU5 15023059
    39394 1oii:D (2.19) BS02 AKG 1.14.11.77 GO:0005737 ... Q9WWU5 15023059
    39395 1oij:A (2.1) BS01 AKG 1.14.11.77 GO:0005737 ... Q9WWU5 15023059
    39396 1oij:B (2.1) BS01 AKG 1.14.11.77 GO:0005737 ... Q9WWU5 15023059
    39397 1oij:C (2.1) BS01 AKG 1.14.11.77 GO:0005737 ... Q9WWU5 15023059
    39398 1oij:D (2.1) BS01 AKG 1.14.11.77 GO:0005737 ... Q9WWU5 15023059
    39399 1oik:A (2.06) BS01 C26 1.14.11.77 GO:0005737 ... Q9WWU5 15023059
    39400 1oik:A (2.06) BS02 AKG 1.14.11.77 GO:0005737 ... Q9WWU5 15023059
    Reference:
  • Chengxin Zhang, Xi Zhang, Lydia Freddolino, and Yang Zhang. BioLiP2: an updated structure database for biologically relevent ligand-protein interactions, Nucleic Acids Research, gkad630 (2023).
  • Jianyi Yang, Ambrish Roy, and Yang Zhang. BioLiP: a semi-manually curated database for biologically relevant ligand-protein interactions, Nucleic Acids Research, 41: D1096-D1103 (2013) (download the PDF file).