SEQ2FUN

BioLiP
Download all results in tab-seperated text for 942758 receptor-ligand interactions, whose format is explained at readme.txt.
  • Hover over PDB to view the title of the structure. Click PDB to view the structure at the RCSB PDB database. Resolution -1.00 means the resolution is unavailable, e.g., for NMR structures.
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  • Hover over Ligand to view the full ligand name. Click Ligand to view the 2D diagram and other detail information of the ligand.
  • Hover over EC number to view the full name of enzymatic activity.
  • Hover over GO terms to view all GO terms.
  • Hover over UniProt to view the protein name.

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    # PDB
    (Resolution Å)     		Site # Ligand EC number GO terms UniProt PubMed Binding
    affinity
    395801 5qq4:A (1.58) BS03 LX7 ? GO:0004659 ... Q8WS26 N/A
    395802 5qq4:A (1.58) BS04 LX7 ? GO:0004659 ... Q8WS26 N/A
    395803 5qq5:A (1.68) BS01 ZN ? GO:0004659 ... Q8WS26 N/A
    395804 5qq5:A (1.68) BS02 JJM ? GO:0004659 ... Q8WS26 N/A
    395805 5qq6:A (1.94) BS01 ZN ? GO:0004659 ... Q8WS26 N/A
    395806 5qq6:A (1.94) BS02 LXJ ? GO:0004659 ... Q8WS26 N/A
    395807 5qq7:A (1.61) BS01 ZN ? GO:0004659 ... Q8WS26 N/A
    395808 5qq7:A (1.61) BS02 LXM ? GO:0004659 ... Q8WS26 N/A
    395809 5qq8:A (1.62) BS01 ZN ? GO:0004659 ... Q8WS26 N/A
    395810 5qq8:A (1.62) BS02 LXS ? GO:0004659 ... Q8WS26 N/A
    395811 5qq9:A (1.61) BS01 M0D ? GO:0004659 ... Q8WS26 N/A
    395812 5qqa:A (2.2) BS01 ZN ? GO:0004659 ... Q8WS26 N/A
    395813 5qqa:A (2.2) BS02 LZV ? GO:0004659 ... Q8WS26 N/A
    395814 5qqb:A (1.58) BS01 ZN ? GO:0004659 ... Q8WS26 N/A
    395815 5qqb:A (1.58) BS02 LZY ? GO:0004659 ... Q8WS26 N/A
    395816 5qqd:A (1.91) BS01 JGA 3.6.5.2 GO:0001764 ... P63000 N/A
    395817 5qqe:A (1.95) BS01 N5S 3.6.5.2 GO:0001764 ... P63000 N/A
    395818 5qqf:A (2.26) BS01 N5V 3.6.5.2 GO:0001764 ... P63000 N/A
    395819 5qqg:A (2.23) BS01 N64 3.6.5.2 GO:0001764 ... P63000 N/A
    395820 5qqh:A (2.09) BS01 N67 3.6.5.2 GO:0001764 ... P63000 N/A
    395821 5qqi:A (2.08) BS01 N6D 3.6.5.2 GO:0001764 ... P63000 N/A
    395822 5qqj:A (1.9) BS01 N6J 3.6.5.2 GO:0001764 ... P63000 N/A
    395823 5qqk:A (2.24) BS01 N6V 3.6.5.2 GO:0001764 ... P63000 N/A
    395824 5qql:A (2.25) BS01 N71 3.6.5.2 GO:0001764 ... P63000 N/A
    395825 5qqm:A (2.02) BS01 N74 3.6.5.2 GO:0001764 ... P63000 N/A
    395826 5qqn:A (2.26) BS01 N5D 3.6.5.2 GO:0001764 ... P63000 N/A
    395827 5qqo:A (2.0) BS01 peptide 3.4.21.27 GO:0004252 ... P03951 31445854
    395828 5qqo:A (2.0) BS02 NRJ 3.4.21.27 GO:0004252 ... P03951 31445854 MOAD: Ki=17nM
    BindingDB: Ki=17nM
    395829 5qqp:A (2.08) BS01 NR7 3.4.21.27 GO:0004252 ... P03951 31445854 MOAD: Ki=5.3nM
    BindingDB: Ki=5.3nM
    395830 5qqq:A (1.93) BS01 PLP 2.3.1.37 GO:0003870 ... P22557 N/A
    395831 5qqq:A (1.93) BS02 NSJ 2.3.1.37 GO:0003870 ... P22557 N/A
    395832 5qqq:A (1.93) BS03 PLP 2.3.1.37 GO:0003870 ... P22557 N/A
    395833 5qqq:B (1.93) BS01 PLP 2.3.1.37 GO:0003870 ... P22557 N/A
    395834 5qqq:B (1.93) BS02 NSJ 2.3.1.37 GO:0003870 ... P22557 N/A
    395835 5qqq:B (1.93) BS03 PLP 2.3.1.37 GO:0003870 ... P22557 N/A
    395836 5qqr:A (1.46) BS01 PLP 2.3.1.37 GO:0003870 ... P22557 N/A
    395837 5qqr:A (1.46) BS02 PLP 2.3.1.37 GO:0003870 ... P22557 N/A
    395838 5qqr:B (1.46) BS01 PLP 2.3.1.37 GO:0003870 ... P22557 N/A
    395839 5qqr:B (1.46) BS02 NSV 2.3.1.37 GO:0003870 ... P22557 N/A
    395840 5qqr:B (1.46) BS03 PLP 2.3.1.37 GO:0003870 ... P22557 N/A
    395841 5qqs:A (1.85) BS01 PLP 2.3.1.37 GO:0003870 ... P22557 N/A
    395842 5qqs:A (1.85) BS02 PLP 2.3.1.37 GO:0003870 ... P22557 N/A
    395843 5qqs:A (1.85) BS03 JHP 2.3.1.37 GO:0003870 ... P22557 N/A
    395844 5qqs:B (1.85) BS01 PLP 2.3.1.37 GO:0003870 ... P22557 N/A
    395845 5qqs:B (1.85) BS02 PLP 2.3.1.37 GO:0003870 ... P22557 N/A
    395846 5qqt:A (1.67) BS01 PLP 2.3.1.37 GO:0003870 ... P22557 N/A
    395847 5qqt:A (1.67) BS02 PLP 2.3.1.37 GO:0003870 ... P22557 N/A
    395848 5qqt:A (1.67) BS03 NT7 2.3.1.37 GO:0003870 ... P22557 N/A
    395849 5qqt:B (1.67) BS01 PLP 2.3.1.37 GO:0003870 ... P22557 N/A
    395850 5qqt:B (1.67) BS02 PLP 2.3.1.37 GO:0003870 ... P22557 N/A
    395851 5qqt:B (1.67) BS03 NT7 2.3.1.37 GO:0003870 ... P22557 N/A
    395852 5qqu:A (1.55) BS01 PLP 2.3.1.37 GO:0003870 ... P22557 N/A
    395853 5qqu:A (1.55) BS02 PLP 2.3.1.37 GO:0003870 ... P22557 N/A
    395854 5qqu:A (1.55) BS03 NTG 2.3.1.37 GO:0003870 ... P22557 N/A
    395855 5qqu:A (1.55) BS04 NTG 2.3.1.37 GO:0003870 ... P22557 N/A
    395856 5qqu:B (1.55) BS01 PLP 2.3.1.37 GO:0003870 ... P22557 N/A
    395857 5qqu:B (1.55) BS02 NTG 2.3.1.37 GO:0003870 ... P22557 N/A
    395858 5qqu:B (1.55) BS03 PLP 2.3.1.37 GO:0003870 ... P22557 N/A
    395859 5qqv:A (1.52) BS01 PLP 2.3.1.37 GO:0003870 ... P22557 N/A
    395860 5qqv:A (1.52) BS02 PLP 2.3.1.37 GO:0003870 ... P22557 N/A
    395861 5qqv:B (1.52) BS01 PLP 2.3.1.37 GO:0003870 ... P22557 N/A
    395862 5qqv:B (1.52) BS02 PLP 2.3.1.37 GO:0003870 ... P22557 N/A
    395863 5qqw:A (1.56) BS01 PLP 2.3.1.37 GO:0003870 ... P22557 N/A
    395864 5qqw:A (1.56) BS02 NU4 2.3.1.37 GO:0003870 ... P22557 N/A
    395865 5qqw:A (1.56) BS03 PLP 2.3.1.37 GO:0003870 ... P22557 N/A
    395866 5qqw:B (1.56) BS01 PLP 2.3.1.37 GO:0003870 ... P22557 N/A
    395867 5qqw:B (1.56) BS02 NU4 2.3.1.37 GO:0003870 ... P22557 N/A
    395868 5qqw:B (1.56) BS03 NU4 2.3.1.37 GO:0003870 ... P22557 N/A
    395869 5qqw:B (1.56) BS04 PLP 2.3.1.37 GO:0003870 ... P22557 N/A
    395870 5qqx:A (1.5) BS01 PLP 2.3.1.37 GO:0003870 ... P22557 N/A
    395871 5qqx:A (1.5) BS02 NUA 2.3.1.37 GO:0003870 ... P22557 N/A
    395872 5qqx:A (1.5) BS03 PLP 2.3.1.37 GO:0003870 ... P22557 N/A
    395873 5qqx:B (1.5) BS01 PLP 2.3.1.37 GO:0003870 ... P22557 N/A
    395874 5qqx:B (1.5) BS02 NUA 2.3.1.37 GO:0003870 ... P22557 N/A
    395875 5qqx:B (1.5) BS03 NUA 2.3.1.37 GO:0003870 ... P22557 N/A
    395876 5qqx:B (1.5) BS04 PLP 2.3.1.37 GO:0003870 ... P22557 N/A
    395877 5qqy:A (1.49) BS01 PLP 2.3.1.37 GO:0003870 ... P22557 N/A
    395878 5qqy:A (1.49) BS02 NUG 2.3.1.37 GO:0003870 ... P22557 N/A
    395879 5qqy:A (1.49) BS03 PLP 2.3.1.37 GO:0003870 ... P22557 N/A
    395880 5qqy:A (1.49) BS04 NUG 2.3.1.37 GO:0003870 ... P22557 N/A
    395881 5qqy:B (1.49) BS01 PLP 2.3.1.37 GO:0003870 ... P22557 N/A
    395882 5qqy:B (1.49) BS02 NUG 2.3.1.37 GO:0003870 ... P22557 N/A
    395883 5qqy:B (1.49) BS03 PLP 2.3.1.37 GO:0003870 ... P22557 N/A
    395884 5qqy:B (1.49) BS04 NUG 2.3.1.37 GO:0003870 ... P22557 N/A
    395885 5qqz:A (1.55) BS01 PLP 2.3.1.37 GO:0003870 ... P22557 N/A
    395886 5qqz:A (1.55) BS02 PLP 2.3.1.37 GO:0003870 ... P22557 N/A
    395887 5qqz:B (1.55) BS01 PLP 2.3.1.37 GO:0003870 ... P22557 N/A
    395888 5qqz:B (1.55) BS02 NUJ 2.3.1.37 GO:0003870 ... P22557 N/A
    395889 5qqz:B (1.55) BS03 PLP 2.3.1.37 GO:0003870 ... P22557 N/A
    395890 5qr0:A (1.65) BS01 PLP 2.3.1.37 GO:0003870 ... P22557 N/A
    395891 5qr0:A (1.65) BS02 PLP 2.3.1.37 GO:0003870 ... P22557 N/A
    395892 5qr0:A (1.65) BS03 NUM 2.3.1.37 GO:0003870 ... P22557 N/A
    395893 5qr0:A (1.65) BS04 NUM 2.3.1.37 GO:0003870 ... P22557 N/A
    395894 5qr0:B (1.65) BS01 PLP 2.3.1.37 GO:0003870 ... P22557 N/A
    395895 5qr0:B (1.65) BS02 PLP 2.3.1.37 GO:0003870 ... P22557 N/A
    395896 5qr1:A (1.44) BS01 PLP 2.3.1.37 GO:0003870 ... P22557 N/A
    395897 5qr1:A (1.44) BS02 HR5 2.3.1.37 GO:0003870 ... P22557 N/A
    395898 5qr1:A (1.44) BS03 PLP 2.3.1.37 GO:0003870 ... P22557 N/A
    395899 5qr1:B (1.44) BS01 PLP 2.3.1.37 GO:0003870 ... P22557 N/A
    395900 5qr1:B (1.44) BS02 HR5 2.3.1.37 GO:0003870 ... P22557 N/A
    395901 5qr1:B (1.44) BS03 PLP 2.3.1.37 GO:0003870 ... P22557 N/A
    395902 5qr2:A (1.66) BS01 PLP 2.3.1.37 GO:0003870 ... P22557 N/A
    395903 5qr2:A (1.66) BS02 PLP 2.3.1.37 GO:0003870 ... P22557 N/A
    395904 5qr2:A (1.66) BS03 NTG 2.3.1.37 GO:0003870 ... P22557 N/A
    395905 5qr2:B (1.66) BS01 PLP 2.3.1.37 GO:0003870 ... P22557 N/A
    395906 5qr2:B (1.66) BS02 PLP 2.3.1.37 GO:0003870 ... P22557 N/A
    395907 5qr3:A (1.71) BS01 PLP 2.3.1.37 GO:0003870 ... P22557 N/A
    395908 5qr3:A (1.71) BS02 PLP 2.3.1.37 GO:0003870 ... P22557 N/A
    395909 5qr3:A (1.71) BS03 JO1 2.3.1.37 GO:0003870 ... P22557 N/A
    395910 5qr3:B (1.71) BS01 PLP 2.3.1.37 GO:0003870 ... P22557 N/A
    395911 5qr3:B (1.71) BS02 PLP 2.3.1.37 GO:0003870 ... P22557 N/A
    395912 5qr4:A (1.57) BS01 PLP 2.3.1.37 GO:0003870 ... P22557 N/A
    395913 5qr4:A (1.57) BS02 PLP 2.3.1.37 GO:0003870 ... P22557 N/A
    395914 5qr4:B (1.57) BS01 PLP 2.3.1.37 GO:0003870 ... P22557 N/A
    395915 5qr4:B (1.57) BS02 NUY 2.3.1.37 GO:0003870 ... P22557 N/A
    395916 5qr4:B (1.57) BS03 PLP 2.3.1.37 GO:0003870 ... P22557 N/A
    395917 5qr5:A (1.49) BS01 PLP 2.3.1.37 GO:0003870 ... P22557 N/A
    395918 5qr5:A (1.49) BS02 PLP 2.3.1.37 GO:0003870 ... P22557 N/A
    395919 5qr5:B (1.49) BS01 PLP 2.3.1.37 GO:0003870 ... P22557 N/A
    395920 5qr5:B (1.49) BS02 NV7 2.3.1.37 GO:0003870 ... P22557 N/A
    395921 5qr5:B (1.49) BS03 PLP 2.3.1.37 GO:0003870 ... P22557 N/A
    395922 5qr6:A (1.52) BS01 PLP 2.3.1.37 GO:0003870 ... P22557 N/A
    395923 5qr6:A (1.52) BS02 PLP 2.3.1.37 GO:0003870 ... P22557 N/A
    395924 5qr6:B (1.52) BS01 PLP 2.3.1.37 GO:0003870 ... P22557 N/A
    395925 5qr6:B (1.52) BS02 PLP 2.3.1.37 GO:0003870 ... P22557 N/A
    395926 5qr7:A (1.74) BS01 PLP 2.3.1.37 GO:0003870 ... P22557 N/A
    395927 5qr7:A (1.74) BS02 PLP 2.3.1.37 GO:0003870 ... P22557 N/A
    395928 5qr7:B (1.74) BS01 PLP 2.3.1.37 GO:0003870 ... P22557 N/A
    395929 5qr7:B (1.74) BS02 LUY 2.3.1.37 GO:0003870 ... P22557 N/A
    395930 5qr7:B (1.74) BS03 LUY 2.3.1.37 GO:0003870 ... P22557 N/A
    395931 5qr7:B (1.74) BS04 PLP 2.3.1.37 GO:0003870 ... P22557 N/A
    395932 5qr8:A (1.85) BS01 PLP 2.3.1.37 GO:0003870 ... P22557 N/A
    395933 5qr8:A (1.85) BS02 PLP 2.3.1.37 GO:0003870 ... P22557 N/A
    395934 5qr8:B (1.85) BS01 PLP 2.3.1.37 GO:0003870 ... P22557 N/A
    395935 5qr8:B (1.85) BS02 NVD 2.3.1.37 GO:0003870 ... P22557 N/A
    395936 5qr8:B (1.85) BS03 PLP 2.3.1.37 GO:0003870 ... P22557 N/A
    395937 5qr9:A (1.62) BS01 PLP 2.3.1.37 GO:0003870 ... P22557 N/A
    395938 5qr9:A (1.62) BS02 PLP 2.3.1.37 GO:0003870 ... P22557 N/A
    395939 5qr9:A (1.62) BS03 NVJ 2.3.1.37 GO:0003870 ... P22557 N/A
    395940 5qr9:B (1.62) BS01 PLP 2.3.1.37 GO:0003870 ... P22557 N/A
    395941 5qr9:B (1.62) BS02 PLP 2.3.1.37 GO:0003870 ... P22557 N/A
    395942 5qra:A (1.72) BS01 PLP 2.3.1.37 GO:0003870 ... P22557 N/A
    395943 5qra:A (1.72) BS02 NVM 2.3.1.37 GO:0003870 ... P22557 N/A
    395944 5qra:A (1.72) BS03 PLP 2.3.1.37 GO:0003870 ... P22557 N/A
    395945 5qra:B (1.72) BS01 PLP 2.3.1.37 GO:0003870 ... P22557 N/A
    395946 5qra:B (1.72) BS02 NVM 2.3.1.37 GO:0003870 ... P22557 N/A
    395947 5qra:B (1.72) BS03 PLP 2.3.1.37 GO:0003870 ... P22557 N/A
    395948 5qrb:A (1.72) BS01 PLP 2.3.1.37 GO:0003870 ... P22557 N/A
    395949 5qrb:A (1.72) BS02 PLP 2.3.1.37 GO:0003870 ... P22557 N/A
    395950 5qrb:B (1.72) BS01 PLP 2.3.1.37 GO:0003870 ... P22557 N/A
    395951 5qrb:B (1.72) BS02 NVY 2.3.1.37 GO:0003870 ... P22557 N/A
    395952 5qrb:B (1.72) BS03 PLP 2.3.1.37 GO:0003870 ... P22557 N/A
    395953 5qrc:A (1.82) BS01 PLP 2.3.1.37 GO:0003870 ... P22557 N/A
    395954 5qrc:A (1.82) BS02 NW4 2.3.1.37 GO:0003870 ... P22557 N/A
    395955 5qrc:A (1.82) BS03 PLP 2.3.1.37 GO:0003870 ... P22557 N/A
    395956 5qrc:B (1.82) BS01 PLP 2.3.1.37 GO:0003870 ... P22557 N/A
    395957 5qrc:B (1.82) BS02 NW4 2.3.1.37 GO:0003870 ... P22557 N/A
    395958 5qrc:B (1.82) BS03 PLP 2.3.1.37 GO:0003870 ... P22557 N/A
    395959 5qrd:A (1.76) BS01 PLP 2.3.1.37 GO:0003870 ... P22557 N/A
    395960 5qrd:A (1.76) BS02 PLP 2.3.1.37 GO:0003870 ... P22557 N/A
    395961 5qrd:B (1.76) BS01 PLP 2.3.1.37 GO:0003870 ... P22557 N/A
    395962 5qrd:B (1.76) BS02 J4Q 2.3.1.37 GO:0003870 ... P22557 N/A
    395963 5qrd:B (1.76) BS03 PLP 2.3.1.37 GO:0003870 ... P22557 N/A
    395964 5qre:A (1.67) BS01 PLP 2.3.1.37 GO:0003870 ... P22557 N/A
    395965 5qre:A (1.67) BS02 NW7 2.3.1.37 GO:0003870 ... P22557 N/A
    395966 5qre:A (1.67) BS03 PLP 2.3.1.37 GO:0003870 ... P22557 N/A
    395967 5qre:B (1.67) BS01 PLP 2.3.1.37 GO:0003870 ... P22557 N/A
    395968 5qre:B (1.67) BS02 NW7 2.3.1.37 GO:0003870 ... P22557 N/A
    395969 5qre:B (1.67) BS03 PLP 2.3.1.37 GO:0003870 ... P22557 N/A
    395970 5qrf:A (2.03) BS01 NUA ? GO:0000978 ... O15178 N/A
    395971 5qrg:A (1.95) BS01 JHP ? GO:0000978 ... O15178 N/A
    395972 5qrh:A (1.81) BS01 JMM ? GO:0000978 ... O15178 N/A
    395973 5qri:A (1.83) BS01 NUY ? GO:0000978 ... O15178 N/A
    395974 5qrj:A (1.81) BS01 NWP ? GO:0000978 ... O15178 N/A
    395975 5qrk:A (1.63) BS01 NWV ? GO:0000978 ... O15178 N/A
    395976 5qrl:A (1.76) BS01 NWY ? GO:0000978 ... O15178 N/A
    395977 5qrm:A (1.55) BS01 K1A ? GO:0000978 ... O15178 N/A
    395978 5qrn:A (1.62) BS01 NX7 ? GO:0000978 ... O15178 N/A
    395979 5qro:A (1.61) BS01 NXJ ? GO:0000978 ... O15178 N/A
    395980 5qrq:A (2.1) BS01 NXS ? GO:0000978 ... O15178 N/A
    395981 5qrr:A (1.69) BS01 NY1 ? GO:0000978 ... O15178 N/A
    395982 5qrs:A (2.06) BS01 NY4 ? GO:0000978 ... O15178 N/A
    395983 5qrt:A (1.77) BS01 GWA ? GO:0000978 ... O15178 N/A
    395984 5qru:A (1.76) BS01 NY7 ? GO:0000978 ... O15178 N/A
    395985 5qrv:A (1.67) BS01 K2M ? GO:0000978 ... O15178 N/A
    395986 5qrw:A (1.74) BS01 NYV ? GO:0000978 ... O15178 N/A
    395987 5qrw:A (1.74) BS02 NYV ? GO:0000978 ... O15178 N/A
    395988 5qrx:A (1.87) BS01 NZG ? GO:0000978 ... O15178 N/A
    395989 5qry:A (1.58) BS01 NZD ? GO:0000978 ... O15178 N/A
    395990 5qrz:A (1.96) BS01 NZ7 ? GO:0000978 ... O15178 N/A
    395991 5qs0:A (1.6) BS01 NZ4 ? GO:0000978 ... O15178 N/A
    395992 5qs1:A (1.66) BS01 NZ1 ? GO:0000978 ... O15178 N/A
    395993 5qs3:A (1.71) BS01 LJA ? GO:0000978 ... O15178 N/A
    395994 5qs4:A (1.65) BS01 JFP ? GO:0000978 ... O15178 N/A
    395995 5qs5:A (1.81) BS01 NZJ ? GO:0000978 ... O15178 N/A
    395996 5qs6:A (1.67) BS01 K0G ? GO:0000978 ... O15178 N/A
    395997 5qs7:A (1.66) BS01 JMM ? GO:0000978 ... O15178 N/A
    395998 5qs9:A (1.43) BS01 O0J ? GO:0000978 ... O15178 N/A
    395999 5qs9:A (1.43) BS02 O0J ? GO:0000978 ... O15178 N/A
    396000 5qsa:A (1.55) BS01 K2P ? GO:0000978 ... O15178 N/A
    Reference:
  • Chengxin Zhang, Xi Zhang, Lydia Freddolino, and Yang Zhang. BioLiP2: an updated structure database for biologically relevent ligand-protein interactions, Nucleic Acids Research, gkad630 (2023).
  • Jianyi Yang, Ambrish Roy, and Yang Zhang. BioLiP: a semi-manually curated database for biologically relevant ligand-protein interactions, Nucleic Acids Research, 41: D1096-D1103 (2013) (download the PDF file).