SEQ2FUN

BioLiP
Download all results in tab-seperated text for 1072681 receptor-ligand interactions, whose format is explained at readme.txt.
  • Hover over PDB to view the title of the structure. Click PDB to view the structure at the RCSB PDB database. Resolution -1.00 means the resolution is unavailable, e.g., for NMR structures.
  • Click Site # to view the binding site structure. Hover over Site # to view the binding residues.
  • Hover over Ligand to view the full ligand name. Click Ligand to view the 2D diagram and other detail information of the ligand.
  • Hover over EC number to view the full name of enzymatic activity.
  • Hover over GO terms to view all GO terms.
  • Hover over UniProt to view the protein name.

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    # PDB
    (Resolution Å)     		Site # Ligand EC number GO terms UniProt PubMed Binding
    affinity
    201 10px:13 (2.45) BS04 MG N/A N/A Q5SHQ6 N/A
    202 10px:14 (2.45) BS01 rna N/A N/A Q5SJE1 N/A
    203 10px:14 (2.45) BS02 ZN N/A N/A Q5SJE1 N/A
    204 10px:15 (2.45) BS01 rna N/A N/A P80339 N/A
    205 10px:15 (2.45) BS02 MG N/A N/A P80339 N/A
    206 10px:15 (2.45) BS03 ZN N/A N/A P80339 N/A
    207 10px:16 (2.45) BS01 rna N/A N/A P35871 N/A
    208 10px:16 (2.45) BS02 ZN N/A N/A P35871 N/A
    209 10px:17 (2.45) BS01 rna N/A N/A P80340 N/A
    210 10px:17 (2.45) BS02 MG N/A N/A P80340 N/A
    211 10px:17 (2.45) BS03 MG N/A N/A P80340 N/A
    212 10px:18 (2.45) BS01 rna N/A N/A Q5SKU1 N/A
    213 10px:18 (2.45) BS02 MG N/A N/A Q5SKU1 N/A
    214 10px:18 (2.45) BS03 MG N/A N/A Q5SKU1 N/A
    215 10px:19 (2.45) BS01 rna N/A N/A Q5SHR2 N/A
    216 10px:19 (2.45) BS02 ZN N/A N/A Q5SHR2 N/A
    217 10px:1D (2.45) BS01 rna N/A N/A P60405 N/A
    218 10px:1D (2.45) BS02 rna N/A N/A P60405 N/A
    219 10px:1D (2.45) BS03 MG N/A N/A P60405 N/A
    220 10px:1D (2.45) BS04 MG N/A N/A P60405 N/A
    221 10px:1D (2.45) BS05 MG N/A N/A P60405 N/A
    222 10px:1D (2.45) BS06 MG N/A N/A P60405 N/A
    223 10px:1D (2.45) BS07 MG N/A N/A P60405 N/A
    224 10px:1D (2.45) BS08 MG N/A N/A P60405 N/A
    225 10px:1D (2.45) BS09 MG N/A N/A P60405 N/A
    226 10px:1D (2.45) BS10 MG N/A N/A P60405 N/A
    227 10px:1D (2.45) BS11 MG N/A N/A P60405 N/A
    228 10px:1D (2.45) BS12 MG N/A N/A P60405 N/A
    229 10px:1D (2.45) BS13 MG N/A N/A P60405 N/A
    230 10px:1E (2.45) BS01 rna N/A N/A Q5SHN8 N/A
    231 10px:1E (2.45) BS02 MG N/A N/A Q5SHN8 N/A
    232 10px:1E (2.45) BS03 MG N/A N/A Q5SHN8 N/A
    233 10px:1E (2.45) BS04 MG N/A N/A Q5SHN8 N/A
    234 10px:1E (2.45) BS05 MG N/A N/A Q5SHN8 N/A
    235 10px:1E (2.45) BS06 MG N/A N/A Q5SHN8 N/A
    236 10px:1F (2.45) BS01 rna N/A N/A Q5SHN9 N/A
    237 10px:1F (2.45) BS02 MG N/A N/A Q5SHN9 N/A
    238 10px:1F (2.45) BS03 MG N/A N/A Q5SHN9 N/A
    239 10px:1F (2.45) BS04 MG N/A N/A Q5SHN9 N/A
    240 10px:1F (2.45) BS05 MG N/A N/A Q5SHN9 N/A
    241 10px:1F (2.45) BS06 MG N/A N/A Q5SHN9 N/A
    242 10px:1F (2.45) BS07 MG N/A N/A Q5SHN9 N/A
    243 10px:1F (2.45) BS08 MG N/A N/A Q5SHN9 N/A
    244 10px:1F (2.45) BS09 MG N/A N/A Q5SHN9 N/A
    245 10px:1F (2.45) BS10 MG N/A N/A Q5SHN9 N/A
    246 10px:1G (2.45) BS01 rna N/A N/A Q5SHQ0 N/A
    247 10px:1G (2.45) BS02 rna N/A N/A Q5SHQ0 N/A
    248 10px:1G (2.45) BS03 rna N/A N/A Q5SHQ0 N/A
    249 10px:1G (2.45) BS04 MG N/A N/A Q5SHQ0 N/A
    250 10px:1G (2.45) BS05 MG N/A N/A Q5SHQ0 N/A
    251 10px:1H (2.45) BS01 rna N/A N/A P0DOY8 N/A
    252 10px:1I (2.45) BS01 rna N/A N/A Q5SLQ1 N/A
    253 10px:1N (2.45) BS01 rna N/A N/A P60488 N/A
    254 10px:1N (2.45) BS02 MG N/A N/A P60488 N/A
    255 10px:1N (2.45) BS03 MG N/A N/A P60488 N/A
    256 10px:1N (2.45) BS04 MG N/A N/A P60488 N/A
    257 10px:1O (2.45) BS01 rna N/A N/A Q5SHP8 N/A
    258 10px:1O (2.45) BS02 rna N/A N/A Q5SHP8 N/A
    259 10px:1O (2.45) BS03 MG N/A N/A Q5SHP8 N/A
    260 10px:1O (2.45) BS04 MG N/A N/A Q5SHP8 N/A
    261 10px:1P (2.45) BS01 rna N/A N/A Q5SHQ7 N/A
    262 10px:1P (2.45) BS02 MG N/A N/A Q5SHQ7 N/A
    263 10px:1P (2.45) BS03 MG N/A N/A Q5SHQ7 N/A
    264 10px:1P (2.45) BS04 MG N/A N/A Q5SHQ7 N/A
    265 10px:1P (2.45) BS05 MG N/A N/A Q5SHQ7 N/A
    266 10px:1P (2.45) BS06 MG N/A N/A Q5SHQ7 N/A
    267 10px:1Q (2.45) BS01 rna N/A N/A P60489 N/A
    268 10px:1Q (2.45) BS02 rna N/A N/A P60489 N/A
    269 10px:1Q (2.45) BS03 rna N/A N/A P60489 N/A
    270 10px:1Q (2.45) BS04 rna N/A N/A P60489 N/A
    271 10px:1Q (2.45) BS05 MG N/A N/A P60489 N/A
    272 10px:1Q (2.45) BS06 MG N/A N/A P60489 N/A
    273 10px:1Q (2.45) BS07 MG N/A N/A P60489 N/A
    274 10px:1Q (2.45) BS08 MG N/A N/A P60489 N/A
    275 10px:1R (2.45) BS01 rna N/A N/A Q9Z9H5 N/A
    276 10px:1R (2.45) BS02 MG N/A N/A Q9Z9H5 N/A
    277 10px:1R (2.45) BS03 MG N/A N/A Q9Z9H5 N/A
    278 10px:1S (2.45) BS01 rna N/A N/A Q5SHQ4 N/A
    279 10px:1S (2.45) BS02 rna N/A N/A Q5SHQ4 N/A
    280 10px:1S (2.45) BS03 MG N/A N/A Q5SHQ4 N/A
    281 10px:1S (2.45) BS04 MG N/A N/A Q5SHQ4 N/A
    282 10px:1T (2.45) BS01 rna N/A N/A P60490 N/A
    283 10px:1T (2.45) BS02 rna N/A N/A P60490 N/A
    284 10px:1T (2.45) BS03 MG N/A N/A P60490 N/A
    285 10px:1U (2.45) BS01 rna N/A N/A P60491 N/A
    286 10px:1U (2.45) BS02 MG N/A N/A P60491 N/A
    287 10px:1U (2.45) BS03 MG N/A N/A P60491 N/A
    288 10px:1U (2.45) BS04 MG N/A N/A P60491 N/A
    289 10px:1U (2.45) BS05 MG N/A N/A P60491 N/A
    290 10px:1U (2.45) BS06 MG N/A N/A P60491 N/A
    291 10px:1U (2.45) BS07 MG N/A N/A P60491 N/A
    292 10px:1U (2.45) BS08 MG N/A N/A P60491 N/A
    293 10px:1U (2.45) BS09 MG N/A N/A P60491 N/A
    294 10px:1V (2.45) BS01 rna N/A N/A P60492 N/A
    295 10px:1V (2.45) BS02 MG N/A N/A P60492 N/A
    296 10px:1V (2.45) BS03 MG N/A N/A P60492 N/A
    297 10px:1V (2.45) BS04 MG N/A N/A P60492 N/A
    298 10px:1V (2.45) BS05 MG N/A N/A P60492 N/A
    299 10px:1V (2.45) BS06 MG N/A N/A P60492 N/A
    300 10px:1V (2.45) BS07 MG N/A N/A P60492 N/A
    301 10px:1V (2.45) BS08 MG N/A N/A P60492 N/A
    302 10px:1W (2.45) BS01 rna N/A N/A Q5SHP3 N/A
    303 10px:1W (2.45) BS02 MG N/A N/A Q5SHP3 N/A
    304 10px:1W (2.45) BS03 MG N/A N/A Q5SHP3 N/A
    305 10px:1W (2.45) BS04 MG N/A N/A Q5SHP3 N/A
    306 10px:1W (2.45) BS05 MG N/A N/A Q5SHP3 N/A
    307 10px:1W (2.45) BS06 MG N/A N/A Q5SHP3 N/A
    308 10px:1W (2.45) BS07 MG N/A N/A Q5SHP3 N/A
    309 10px:1X (2.45) BS01 rna N/A N/A Q5SHP0 N/A
    310 10px:1X (2.45) BS02 MG N/A N/A Q5SHP0 N/A
    311 10px:1X (2.45) BS03 MG N/A N/A Q5SHP0 N/A
    312 10px:1X (2.45) BS04 MG N/A N/A Q5SHP0 N/A
    313 10px:1X (2.45) BS05 MG N/A N/A Q5SHP0 N/A
    314 10px:1X (2.45) BS06 MG N/A N/A Q5SHP0 N/A
    315 10px:1Y (2.45) BS01 rna N/A N/A Q5SHP9 N/A
    316 10px:1Y (2.45) BS02 MG N/A N/A Q5SHP9 N/A
    317 10px:1Y (2.45) BS03 MG N/A N/A Q5SHP9 N/A
    318 10px:1Y (2.45) BS04 ZN N/A N/A Q5SHP9 N/A
    319 10px:1Z (2.45) BS01 rna N/A N/A Q5SHZ1 N/A
    320 10px:1Z (2.45) BS02 rna N/A N/A Q5SHZ1 N/A
    321 10px:1Z (2.45) BS03 MG N/A N/A Q5SHZ1 N/A
    322 10px:1b (2.45) BS01 rna N/A N/A P80371 N/A
    323 10px:1b (2.45) BS02 MG N/A N/A P80371 N/A
    324 10px:1c (2.45) BS01 rna N/A N/A P80372 N/A
    325 10px:1d (2.45) BS01 rna N/A N/A P80373 N/A
    326 10px:1d (2.45) BS02 SF4 N/A N/A P80373 N/A
    327 10px:1e (2.45) BS01 rna N/A N/A Q5SHQ5 N/A
    328 10px:1e (2.45) BS02 MG N/A N/A Q5SHQ5 N/A
    329 10px:1e (2.45) BS03 MG N/A N/A Q5SHQ5 N/A
    330 10px:1f (2.45) BS01 rna N/A N/A Q5SLP8 N/A
    331 10px:1f (2.45) BS02 MG N/A N/A Q5SLP8 N/A
    332 10px:1g (2.45) BS01 rna N/A N/A P17291 N/A
    333 10px:1g (2.45) BS02 rna N/A N/A P17291 N/A
    334 10px:1h (2.45) BS01 rna N/A N/A P0DOY9 N/A
    335 10px:1i (2.45) BS01 rna N/A N/A P80374 N/A
    336 10px:1i (2.45) BS02 rna N/A N/A P80374 N/A
    337 10px:1j (2.45) BS01 rna N/A N/A Q5SHN7 N/A
    338 10px:1k (2.45) BS01 rna N/A N/A P80376 N/A
    339 10px:1k (2.45) BS02 MG N/A N/A P80376 N/A
    340 10px:1l (2.45) BS01 rna N/A N/A Q5SHN3 N/A
    341 10px:1l (2.45) BS02 rna N/A N/A Q5SHN3 N/A
    342 10px:1m (2.45) BS01 rna N/A N/A P80377 N/A
    343 10px:1m (2.45) BS02 rna N/A N/A P80377 N/A
    344 10px:1m (2.45) BS03 rna N/A N/A P80377 N/A
    345 10px:1m (2.45) BS04 MG N/A N/A P80377 N/A
    346 10px:1n (2.45) BS01 rna N/A N/A P0DOY6 N/A
    347 10px:1n (2.45) BS02 MG N/A N/A P0DOY6 N/A
    348 10px:1n (2.45) BS03 ZN N/A N/A P0DOY6 N/A
    349 10px:1o (2.45) BS01 rna N/A N/A Q5SJ76 N/A
    350 10px:1o (2.45) BS02 rna N/A N/A Q5SJ76 N/A
    351 10px:1p (2.45) BS01 rna N/A N/A Q5SJH3 N/A
    352 10px:1q (2.45) BS01 rna N/A N/A P0DOY7 N/A
    353 10px:1r (2.45) BS01 rna N/A N/A Q5SLQ0 N/A
    354 10px:1s (2.45) BS01 rna N/A N/A Q5SHP2 N/A
    355 10px:1t (2.45) BS01 rna N/A N/A P80380 N/A
    356 10px:1t (2.45) BS02 MG N/A N/A P80380 N/A
    357 10px:20 (2.45) BS01 rna N/A N/A P60493 N/A
    358 10px:20 (2.45) BS02 rna N/A N/A P60493 N/A
    359 10px:20 (2.45) BS03 rna N/A N/A P60493 N/A
    360 10px:21 (2.45) BS01 rna N/A N/A P60494 N/A
    361 10px:21 (2.45) BS02 rna N/A N/A P60494 N/A
    362 10px:21 (2.45) BS03 MG N/A N/A P60494 N/A
    363 10px:22 (2.45) BS01 rna N/A N/A Q5SHP6 N/A
    364 10px:23 (2.45) BS01 rna N/A N/A Q5SHQ6 N/A
    365 10px:23 (2.45) BS02 rna N/A N/A Q5SHQ6 N/A
    366 10px:23 (2.45) BS03 MG N/A N/A Q5SHQ6 N/A
    367 10px:24 (2.45) BS01 rna N/A N/A Q5SJE1 N/A
    368 10px:24 (2.45) BS02 ZN N/A N/A Q5SJE1 N/A
    369 10px:25 (2.45) BS01 rna N/A N/A P80339 N/A
    370 10px:25 (2.45) BS02 MG N/A N/A P80339 N/A
    371 10px:25 (2.45) BS03 MG N/A N/A P80339 N/A
    372 10px:25 (2.45) BS04 MG N/A N/A P80339 N/A
    373 10px:25 (2.45) BS05 ZN N/A N/A P80339 N/A
    374 10px:26 (2.45) BS01 rna N/A N/A P35871 N/A
    375 10px:26 (2.45) BS02 ZN N/A N/A P35871 N/A
    376 10px:27 (2.45) BS01 rna N/A N/A P80340 N/A
    377 10px:27 (2.45) BS02 MG N/A N/A P80340 N/A
    378 10px:28 (2.45) BS01 rna N/A N/A Q5SKU1 N/A
    379 10px:28 (2.45) BS02 MG N/A N/A Q5SKU1 N/A
    380 10px:29 (2.45) BS01 rna N/A N/A Q5SHR2 N/A
    381 10px:29 (2.45) BS02 ZN N/A N/A Q5SHR2 N/A
    382 10px:2D (2.45) BS01 rna N/A N/A P60405 N/A
    383 10px:2D (2.45) BS02 rna N/A N/A P60405 N/A
    384 10px:2D (2.45) BS03 MG N/A N/A P60405 N/A
    385 10px:2D (2.45) BS04 MG N/A N/A P60405 N/A
    386 10px:2D (2.45) BS05 MG N/A N/A P60405 N/A
    387 10px:2D (2.45) BS06 MG N/A N/A P60405 N/A
    388 10px:2E (2.45) BS01 rna N/A N/A Q5SHN8 N/A
    389 10px:2E (2.45) BS02 MG N/A N/A Q5SHN8 N/A
    390 10px:2F (2.45) BS01 rna N/A N/A Q5SHN9 N/A
    391 10px:2F (2.45) BS02 MG N/A N/A Q5SHN9 N/A
    392 10px:2F (2.45) BS03 MG N/A N/A Q5SHN9 N/A
    393 10px:2F (2.45) BS04 MG N/A N/A Q5SHN9 N/A
    394 10px:2G (2.45) BS01 rna N/A N/A Q5SHQ0 N/A
    395 10px:2G (2.45) BS02 rna N/A N/A Q5SHQ0 N/A
    396 10px:2G (2.45) BS03 rna N/A N/A Q5SHQ0 N/A
    397 10px:2G (2.45) BS04 MG N/A N/A Q5SHQ0 N/A
    398 10px:2H (2.45) BS01 rna N/A N/A P0DOY8 N/A
    399 10px:2I (2.45) BS01 rna N/A N/A Q5SLQ1 N/A
    400 10px:2N (2.45) BS01 rna N/A N/A P60488 N/A
    Reference:
  • Chengxin Zhang, Xi Zhang, Lydia Freddolino, and Yang Zhang. BioLiP2: an updated structure database for biologically relevent ligand-protein interactions, Nucleic Acids Research, gkad630 (2023).
  • Jianyi Yang, Ambrish Roy, and Yang Zhang. BioLiP: a semi-manually curated database for biologically relevant ligand-protein interactions, Nucleic Acids Research, 41: D1096-D1103 (2013) (download the PDF file).