BioLiP

Download all results in tab-seperated text for 14 receptor-ligand interactions, whose format is explained at readme.txt.

Hover over PDB to view the title of the structure. Click PDB to view the structure at the RCSB PDB database. Resolution -1.00 means the resolution is unavailable, e.g., for NMR structures.

Click Site # to view the binding site structure. Hover over Site # to view the binding residues.

Hover over Ligand to view the full ligand name. Click Ligand to view the 2D diagram and other detail information of the ligand.

Hover over EC number to view the full name of enzymatic activity.

Hover over GO terms to view all GO terms.

Hover over UniProt to view the protein name.

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#	PDB (Resolution Å)	Site #	Ligand	EC number	GO terms	UniProt	PubMed
1	2y00:A (2.5)	BS01	Y01	?	GO:0004930 ...	P07700	21228877
2	2y00:A (2.5)	BS02	Y01	?	GO:0004930 ...	P07700	21228877
3	2y00:A (2.5)	BS03	2CV	?	GO:0004930 ...	P07700	21228877
4	2y00:A (2.5)	BS04	2CV	?	GO:0004930 ...	P07700	21228877
5	2y00:A (2.5)	BS05	2CV	?	GO:0004930 ...	P07700	21228877
6	2y00:A (2.5)	BS06	Y00	?	GO:0004930 ...	P07700	21228877
7	2y00:A (2.5)	BS07	Y01	?	GO:0004930 ...	P07700	21228877
8	2y00:B (2.5)	BS01	Y01	?	GO:0004930 ...	P07700	21228877
9	2y00:B (2.5)	BS02	2CV	?	GO:0004930 ...	P07700	21228877
10	2y00:B (2.5)	BS03	Y01	?	GO:0004930 ...	P07700	21228877
11	2y00:B (2.5)	BS04	Y01	?	GO:0004930 ...	P07700	21228877
12	2y00:B (2.5)	BS05	2CV	?	GO:0004930 ...	P07700	21228877
13	2y00:B (2.5)	BS06	2CV	?	GO:0004930 ...	P07700	21228877
14	2y00:B (2.5)	BS07	Y00	?	GO:0004930 ...	P07700	21228877

Reference:

Chengxin Zhang, Xi Zhang, Lydia Freddolino, and Yang Zhang. BioLiP2: an updated structure database for biologically relevent ligand-protein interactions, Nucleic Acids Research, gkad630 (2023).

Jianyi Yang, Ambrish Roy, and Yang Zhang. BioLiP: a semi-manually curated database for biologically relevant ligand-protein interactions, Nucleic Acids Research, 41: D1096-D1103 (2013) (download the PDF file).