SEQ2FUN

BioLiP
Download all results in tab-seperated text for 942758 receptor-ligand interactions, whose format is explained at readme.txt.
  • Hover over PDB to view the title of the structure. Click PDB to view the structure at the RCSB PDB database. Resolution -1.00 means the resolution is unavailable, e.g., for NMR structures.
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    # PDB
    (Resolution Å)
    Site # Ligand EC number GO terms UniProt PubMed Binding
    affinity
    402201 5suk:B (2.88) BS02 G6P 2.4.1.11 GO:0004373 ... P27472 27935293
    402202 5suk:C (2.88) BS01 G6P 2.4.1.11 GO:0004373 ... P27472 27935293
    402203 5suk:D (2.88) BS01 G6P 2.4.1.11 GO:0004373 ... P27472 27935293
    402204 5sul:A (3.3) BS01 UDP 2.4.1.11 GO:0004373 ... P27472 27935293
    402205 5sul:B (3.3) BS01 U5P 2.4.1.11 GO:0004373 ... P27472 27935293
    402206 5sun:A (2.477) BS01 NDP 1.1.1.42 GO:0000287 ... O75874 28132785
    402207 5sun:A (2.477) BS02 70Q 1.1.1.42 GO:0000287 ... O75874 28132785 MOAD: ic50=0.59uM
    402208 5sun:B (2.477) BS01 NDP 1.1.1.42 GO:0000287 ... O75874 28132785
    402209 5sun:B (2.477) BS02 70Q 1.1.1.42 GO:0000287 ... O75874 28132785 MOAD: ic50=0.59uM
    402210 5sup:A (2.6) BS01 peptide 3.6.4.13 GO:0003676 ... Q07478 28059701
    402211 5sup:A (2.6) BS02 rna 3.6.4.13 GO:0003676 ... Q07478 28059701
    402212 5sup:A (2.6) BS03 ADP 3.6.4.13 GO:0003676 ... Q07478 28059701
    402213 5sup:A (2.6) BS04 BEF 3.6.4.13 GO:0003676 ... Q07478 28059701
    402214 5sup:B (2.6) BS01 peptide 3.6.4.13 GO:0003676 ... Q07478 28059701
    402215 5sup:B (2.6) BS02 rna 3.6.4.13 GO:0003676 ... Q07478 28059701
    402216 5sup:B (2.6) BS03 ADP 3.6.4.13 GO:0003676 ... Q07478 28059701
    402217 5sup:B (2.6) BS04 BEF 3.6.4.13 GO:0003676 ... Q07478 28059701
    402218 5sup:C (2.6) BS01 peptide 3.6.4.13 GO:0003676 ... Q07478 28059701
    402219 5sup:C (2.6) BS02 rna 3.6.4.13 GO:0003676 ... Q07478 28059701
    402220 5sup:C (2.6) BS03 ADP 3.6.4.13 GO:0003676 ... Q07478 28059701
    402221 5sup:C (2.6) BS04 BEF 3.6.4.13 GO:0003676 ... Q07478 28059701
    402222 5suq:A (6.0) BS01 KEG 3.6.4.13 GO:0000346 ... Q07478 28059701
    402223 5suq:A (6.0) BS02 KEG 3.6.4.13 GO:0000346 ... Q07478 28059701
    402224 5suq:A (6.0) BS03 KEG 3.6.4.13 GO:0000346 ... Q07478 28059701
    402225 5suq:C (6.0) BS01 KEG 3.6.4.13 GO:0000346 ... Q07478 28059701
    402226 5suq:C (6.0) BS02 KEG 3.6.4.13 GO:0000346 ... Q07478 28059701
    402227 5suq:C (6.0) BS03 KEG 3.6.4.13 GO:0000346 ... Q07478 28059701
    402228 5suv:A (1.75) BS01 COA 2.7.8.7 GO:0000287 ... A1KVH5 N/A
    402229 5suv:A (1.75) BS02 COA 2.7.8.7 GO:0000287 ... A1KVH5 N/A
    402230 5suv:B (1.75) BS01 COA 2.7.8.7 GO:0000287 ... A1KVH5 N/A
    402231 5suv:B (1.75) BS02 COA 2.7.8.7 GO:0000287 ... A1KVH5 N/A
    402232 5suv:C (1.75) BS01 COA 2.7.8.7 GO:0000287 ... A1KVH5 N/A
    402233 5suv:C (1.75) BS02 COA 2.7.8.7 GO:0000287 ... A1KVH5 N/A
    402234 5suw:A (2.3) BS01 70G ? GO:0000976 ... A5F384 N/A
    402235 5sux:A (2.0) BS01 70H ? GO:0003677 ... Q7BGC0 N/A
    402236 5sv1:E (3.5) BS01 peptide ? GO:0005515 ... P0ABU7 27654919
    402237 5sv1:G (3.5) BS01 peptide ? GO:0005515 ... P0ABU7 27654919
    402238 5sv1:H (3.5) BS01 peptide ? GO:0005515 ... P0ABU7 27654919
    402239 5sv1:I (3.5) BS01 peptide ? GO:0005515 ... P0ABU7 27654919
    402240 5sv8:A (1.588) BS01 BGC 3.2.1.73 GO:0004553 ... F6I323 27859885
    402241 5sv8:A (1.588) BS02 BGC 3.2.1.73 GO:0004553 ... F6I323 27859885
    402242 5sva:A (15.3) BS01 dna 2.7.7.6 GO:0000428 ... P04050 27610567
    402243 5sva:A (15.3) BS02 ZN 2.7.7.6 GO:0000428 ... P04050 27610567
    402244 5sva:A (15.3) BS03 ZN 2.7.7.6 GO:0000428 ... P04050 27610567
    402245 5sva:A (15.3) BS04 MG 2.7.7.6 GO:0000428 ... P04050 27610567
    402246 5sva:B (15.3) BS01 ZN 2.7.7.6 GO:0000428 ... P08518 27610567
    402247 5sva:C (15.3) BS01 ZN ? GO:0000428 ... P16370 27610567
    402248 5sva:D (15.3) BS01 peptide ? GO:0000166 ... P20433 27610567
    402249 5sva:I (15.3) BS01 ZN ? GO:0000428 ... P27999 27610567
    402250 5sva:I (15.3) BS02 ZN ? GO:0000428 ... P27999 27610567
    402251 5sva:J (15.3) BS01 ZN ? GO:0000428 ... P22139 27610567
    402252 5sva:L (15.3) BS01 ZN ? GO:0000428 ... P40422 27610567
    402253 5sva:M (15.3) BS01 peptide ? GO:0003712 ... P38782 27610567
    402254 5sva:P (15.3) BS01 peptide ? GO:0000979 ... P32569 27610567
    402255 5sva:U (15.3) BS01 peptide ? GO:0000122 ... Q08278 27610567
    402256 5sva:X (15.3) BS01 peptide ? GO:0003712 ... P38633 27610567
    402257 5sva:Z (15.3) BS01 dna 5.6.2.4 GO:0000019 ... Q00578 27610567
    402258 5sva:d (15.3) BS01 dna ? GO:0000979 ... P32773 27610567
    402259 5sva:f (15.3) BS01 dna ? GO:0001096 ... P41895 27610567
    402260 5sva:j (15.3) BS01 dna ? GO:0000126 ... P13393 27610567
    402261 5sva:j (15.3) BS02 dna ? GO:0000126 ... P13393 27610567
    402262 5svb:A (2.645) BS01 MN 6.4.1.6 GO:0003824 ... Q8RM03 28775283
    402263 5svb:B (2.645) BS01 AMP 6.4.1.6 GO:0005524 ... Q8RM04 28775283
    402264 5svb:C (2.645) BS01 ZN 6.4.1.6 GO:0005524 ... Q8RM02 28775283
    402265 5svb:D (2.645) BS01 MN 6.4.1.6 GO:0003824 ... Q8RM03 28775283
    402266 5svb:E (2.645) BS01 AMP 6.4.1.6 GO:0005524 ... Q8RM04 28775283
    402267 5svb:F (2.645) BS01 ZN 6.4.1.6 GO:0005524 ... Q8RM02 28775283
    402268 5svc:A (2.7) BS01 MN 6.4.1.6 GO:0003824 ... Q8RM03 28775283
    402269 5svc:C (2.7) BS01 ZN 6.4.1.6 GO:0005524 ... Q8RM02 28775283
    402270 5svc:D (2.7) BS01 MN 6.4.1.6 GO:0003824 ... Q8RM03 28775283
    402271 5svc:F (2.7) BS01 ZN 6.4.1.6 GO:0005524 ... Q8RM02 28775283
    402272 5sve:A (2.596) BS01 peptide 3.1.3.16 GO:0016787 ... Q08209 27974827
    402273 5sve:A (2.596) BS02 FE 3.1.3.16 GO:0016787 ... Q08209 27974827
    402274 5sve:A (2.596) BS03 ZN 3.1.3.16 GO:0016787 ... Q08209 27974827
    402275 5sve:B (2.596) BS01 peptide ? GO:0001569 ... P63098 27974827
    402276 5sve:B (2.596) BS02 CA ? GO:0001569 ... P63098 27974827
    402277 5sve:B (2.596) BS03 CA ? GO:0001569 ... P63098 27974827
    402278 5sve:B (2.596) BS04 CA ? GO:0001569 ... P63098 27974827
    402279 5sve:B (2.596) BS05 CA ? GO:0001569 ... P63098 27974827
    402280 5svf:A (2.34) BS01 NDP 1.1.1.42 GO:0000287 ... O75874 28132785
    402281 5svf:A (2.34) BS02 70P 1.1.1.42 GO:0000287 ... O75874 28132785 MOAD: ic50=0.22uM
    BindingDB: IC50=330.5nM
    402282 5svf:B (2.34) BS01 NDP 1.1.1.42 GO:0000287 ... O75874 28132785
    402283 5svf:B (2.34) BS02 70P 1.1.1.42 GO:0000287 ... O75874 28132785 MOAD: ic50=0.22uM
    BindingDB: IC50=330.5nM
    402284 5svf:C (2.34) BS01 NDP 1.1.1.42 GO:0000287 ... O75874 28132785
    402285 5svf:C (2.34) BS02 70P 1.1.1.42 GO:0000287 ... O75874 28132785 MOAD: ic50=0.22uM
    BindingDB: IC50=330.5nM
    402286 5svf:D (2.34) BS01 NDP 1.1.1.42 GO:0000287 ... O75874 28132785
    402287 5svf:D (2.34) BS02 70P 1.1.1.42 GO:0000287 ... O75874 28132785 MOAD: ic50=0.22uM
    BindingDB: IC50=330.5nM
    402288 5svg:A (2.5) BS01 FMN ? N/A Q94BT6 28244872
    402289 5svg:B (2.5) BS01 FMN ? N/A Q94BT6 28244872
    402290 5svg:C (2.5) BS01 FMN ? N/A Q94BT6 28244872
    402291 5svg:D (2.5) BS01 FMN ? N/A Q94BT6 28244872
    402292 5svi:A (1.613) BS01 peptide ? GO:0008270 ... Q14149 27653685
    402293 5svi:A (1.613) BS02 ZN ? GO:0008270 ... Q14149 27653685
    402294 5svi:B (1.613) BS01 peptide ? GO:0008270 ... Q14149 27653685
    402295 5svi:B (1.613) BS02 ZN ? GO:0008270 ... Q14149 27653685
    402296 5svk:A (2.773) BS01 GLC ? GO:0001614 ... P56373 27626375
    402297 5svk:A (2.773) BS02 ATP ? GO:0001614 ... P56373 27626375 BindingDB: EC50=340nM
    402298 5svk:B (2.773) BS01 GLC ? GO:0001614 ... P56373 27626375
    402299 5svk:B (2.773) BS02 ATP ? GO:0001614 ... P56373 27626375 BindingDB: EC50=340nM
    402300 5svl:A (2.9) BS01 ATP ? GO:0001614 ... P56373 27626375
    402301 5svl:B (2.9) BS01 ATP ? GO:0001614 ... P56373 27626375
    402302 5svm:A (3.093) BS01 6AT ? GO:0001614 ... P56373 27626375 BindingDB: Ki=8.2nM, EC50=350nM
    402303 5svm:B (3.093) BS01 ATP ? GO:0001614 ... P56373 27626375
    402304 5svn:A (2.1) BS01 NDP 1.1.1.42 GO:0000287 ... P48735 28132785
    402305 5svn:A (2.1) BS02 NDP 1.1.1.42 GO:0000287 ... P48735 28132785
    402306 5svn:B (2.1) BS01 NDP 1.1.1.42 GO:0000287 ... P48735 28132785
    402307 5svn:B (2.1) BS02 NDP 1.1.1.42 GO:0000287 ... P48735 28132785
    402308 5svo:A (1.87) BS01 NAP 1.1.1.42 GO:0000287 ... P48735 28132785
    402309 5svo:B (1.87) BS01 NAP 1.1.1.42 GO:0000287 ... P48735 28132785
    402310 5svp:A (3.298) BS01 6AT ? GO:0001614 ... P56373 27626375 BindingDB: Ki=8.2nM, EC50=350nM
    402311 5svp:B (3.298) BS01 ATP ? GO:0001614 ... P56373 27626375
    402312 5svq:A (3.25) BS01 128 ? GO:0001614 ... P56373 27626375
    402313 5svr:A (3.13) BS01 71C ? GO:0001614 ... P56373 27626375 BindingDB: IC50=220nM, Ki=10.8nM
    402314 5svu:A (2.601) BS01 FMN ? N/A Q94BT6 28244872
    402315 5svu:B (2.601) BS01 FMN ? N/A Q94BT6 28244872
    402316 5svu:C (2.601) BS01 FMN ? N/A Q94BT6 28244872
    402317 5svu:D (2.601) BS01 FMN ? N/A Q94BT6 28244872
    402318 5svv:A (2.101) BS01 FMN ? N/A Q94BT6 28244872
    402319 5svv:B (2.101) BS01 FMN ? N/A Q94BT6 28244872
    402320 5svv:C (2.101) BS01 FMN ? N/A Q94BT6 28244872
    402321 5svv:D (2.101) BS01 FMN ? N/A Q94BT6 28244872
    402322 5svw:A (2.29) BS01 FMN ? N/A Q94BT6 28244872
    402323 5svw:B (2.29) BS01 FMN ? N/A Q94BT6 28244872
    402324 5svw:C (2.29) BS01 FMN ? N/A Q94BT6 28244872
    402325 5svw:D (2.29) BS01 FMN ? N/A Q94BT6 28244872
    402326 5svw:D (2.29) BS02 FMN ? N/A Q94BT6 28244872
    402327 5svx:A (1.56) BS01 peptide ? GO:0008270 ... Q14149 27653685
    402328 5svx:A (1.56) BS02 ZN ? GO:0008270 ... Q14149 27653685
    402329 5svy:A (1.05) BS01 peptide ? GO:0008270 ... Q14149 27653685
    402330 5svy:A (1.05) BS02 ZN ? GO:0008270 ... Q14149 27653685
    402331 5svz:A (2.0) BS01 peptide ? GO:0005737 ... P52293 28490747
    402332 5sw1:A (1.1) BS01 MHA ? GO:0031410 ... P02883 N/A
    402333 5sw3:A (1.38) BS01 ZN 2.4.2.29 GO:0002099 ... P28720 31808981
    402334 5sw3:A (1.38) BS02 46L 2.4.2.29 GO:0002099 ... P28720 31808981
    402335 5sw3:A (1.38) BS03 46L 2.4.2.29 GO:0002099 ... P28720 31808981
    402336 5sw4:A (1.9) BS01 HEM 1.11.1.21 GO:0004096 ... Q3JNW6 16211084
    402337 5sw4:A (1.9) BS02 OXY 1.11.1.21 GO:0004096 ... Q3JNW6 16211084
    402338 5sw4:B (1.9) BS01 HEM 1.11.1.21 GO:0004096 ... Q3JNW6 16211084
    402339 5sw5:A (2.05) BS01 HEM 1.11.1.21 GO:0004096 ... Q3JNW6 16211084
    402340 5sw5:A (2.05) BS02 OXY 1.11.1.21 GO:0004096 ... Q3JNW6 16211084
    402341 5sw5:B (2.05) BS01 HEM 1.11.1.21 GO:0004096 ... Q3JNW6 16211084
    402342 5sw5:B (2.05) BS02 OXY 1.11.1.21 GO:0004096 ... Q3JNW6 16211084
    402343 5sw6:A (1.9) BS01 HEM 1.11.1.21 GO:0004096 ... Q3JNW6 16211084
    402344 5sw6:A (1.9) BS02 OXY 1.11.1.21 GO:0004096 ... Q3JNW6 16211084
    402345 5sw6:A (1.9) BS03 OXY 1.11.1.21 GO:0004096 ... Q3JNW6 16211084
    402346 5sw6:B (1.9) BS01 HEM 1.11.1.21 GO:0004096 ... Q3JNW6 16211084
    402347 5sw6:B (1.9) BS02 OXY 1.11.1.21 GO:0004096 ... Q3JNW6 16211084
    402348 5sw7:A (1.851) BS01 HEM ? GO:0004601 ... P69905 N/A
    402349 5sw7:B (1.851) BS01 HEM ? GO:0004601 ... P68871 N/A
    402350 5sw9:A (2.846) BS01 peptide ? GO:0000159 ... Q13362 27998540
    402351 5swa:A (3.0) BS01 BMA N/A N/A N/A 28056108
    402352 5swa:B (3.0) BS01 BMA N/A N/A N/A 28056108
    402353 5swb:A (1.73) BS01 BMA N/A N/A N/A 28056108
    402354 5swb:A (1.73) BS02 MAN N/A N/A N/A 28056108
    402355 5swb:A (1.73) BS03 MAN N/A N/A N/A 28056108
    402356 5swb:A (1.73) BS04 MAN N/A N/A N/A 28056108
    402357 5swb:A (1.73) BS05 MAN N/A N/A N/A 28056108
    402358 5swb:C (1.73) BS01 BMA N/A N/A N/A 28056108
    402359 5swb:C (1.73) BS02 MAN N/A N/A N/A 28056108
    402360 5swb:C (1.73) BS03 MAN N/A N/A N/A 28056108
    402361 5swb:C (1.73) BS04 MAN N/A N/A N/A 28056108
    402362 5swb:C (1.73) BS05 MAN N/A N/A N/A 28056108
    402363 5swb:D (1.73) BS01 BMA N/A N/A N/A 28056108
    402364 5swb:D (1.73) BS02 MAN N/A N/A N/A 28056108
    402365 5swb:D (1.73) BS03 MAN N/A N/A N/A 28056108
    402366 5swb:D (1.73) BS04 MAN N/A N/A N/A 28056108
    402367 5swb:D (1.73) BS05 MAN N/A N/A N/A 28056108
    402368 5swb:G (1.73) BS01 BMA N/A N/A N/A 28056108
    402369 5swb:G (1.73) BS02 MAN N/A N/A N/A 28056108
    402370 5swb:G (1.73) BS03 MAN N/A N/A N/A 28056108
    402371 5swb:G (1.73) BS04 MAN N/A N/A N/A 28056108
    402372 5swb:G (1.73) BS05 MAN N/A N/A N/A 28056108
    402373 5swc:A (1.45) BS01 ZN 4.2.1.1 GO:0004089 ... Q54735 27729545
    402374 5swc:B (1.45) BS01 ZN 4.2.1.1 GO:0004089 ... Q54735 27729545
    402375 5swc:C (1.45) BS01 ZN 4.2.1.1 GO:0004089 ... Q54735 27729545
    402376 5swc:D (1.45) BS01 ZN 4.2.1.1 GO:0004089 ... Q54735 27729545
    402377 5swc:E (1.45) BS01 ZN 4.2.1.1 GO:0004089 ... Q54735 27729545
    402378 5swc:F (1.45) BS01 ZN 4.2.1.1 GO:0004089 ... Q54735 27729545
    402379 5swf:A (2.818) BS01 peptide ? GO:0000159 ... Q13362 27998540
    402380 5swh:A (2.5) BS01 71D 2.7.10.2 GO:0004672 ... P00523 N/A
    402381 5swh:B (2.5) BS01 71D 2.7.10.2 GO:0004672 ... P00523 N/A
    402382 5swi:A (2.15) BS01 BMA N/A GO:0005975 ... N/A 28056108
    402383 5swi:A (2.15) BS02 CA N/A GO:0005975 ... N/A 28056108
    402384 5swi:B (2.15) BS01 CA N/A GO:0005975 ... N/A 28056108
    402385 5swi:B (2.15) BS02 BMA N/A GO:0005975 ... N/A 28056108
    402386 5swi:C (2.15) BS01 BMA N/A GO:0005975 ... N/A 28056108
    402387 5swi:C (2.15) BS02 CA N/A GO:0005975 ... N/A 28056108
    402388 5swi:D (2.15) BS01 BMA N/A GO:0005975 ... N/A 28056108
    402389 5swi:D (2.15) BS02 CA N/A GO:0005975 ... N/A 28056108
    402390 5swm:A (1.5) BS01 dna 3.1.26.4 GO:0003676 ... Q9KEI9 27611889
    402391 5swm:A (1.5) BS02 dna 3.1.26.4 GO:0003676 ... Q9KEI9 27611889
    402392 5swm:B (1.5) BS01 dna 3.1.26.4 GO:0003676 ... Q9KEI9 27611889
    402393 5swm:B (1.5) BS02 dna 3.1.26.4 GO:0003676 ... Q9KEI9 27611889
    402394 5swn:A (1.541) BS01 FAH 3.8.1.3 GO:0003824 ... Q6NAM1 28104837
    402395 5swo:B (3.5) BS01 2ZV ? N/A P27986 28129991
    402396 5swp:A (3.41) BS01 70W 2.7.11.1
    2.7.1.137
    2.7.1.153
    GO:0001525 ... P42336 28129991
    402397 5swq:A (2.0) BS01 peptide ? N/A P04439 27645996
    402398 5sws:A (2.86) BS01 peptide ? N/A P01899 27717799
    402399 5sws:E (2.86) BS01 peptide N/A N/A N/A 27717799
    402400 5swt:A (3.49) BS01 71B 2.7.11.1
    2.7.1.137
    2.7.1.153
    GO:0001525 ... P42336 28129991

    Reference:
  • Chengxin Zhang, Xi Zhang, Lydia Freddolino, and Yang Zhang. BioLiP2: an updated structure database for biologically relevent ligand-protein interactions, Nucleic Acids Research, gkad630 (2023).
  • Jianyi Yang, Ambrish Roy, and Yang Zhang. BioLiP: a semi-manually curated database for biologically relevant ligand-protein interactions, Nucleic Acids Research, 41: D1096-D1103 (2013) (download the PDF file).