SEQ2FUN

BioLiP
Download all results in tab-seperated text for 942758 receptor-ligand interactions, whose format is explained at readme.txt.
  • Hover over PDB to view the title of the structure. Click PDB to view the structure at the RCSB PDB database. Resolution -1.00 means the resolution is unavailable, e.g., for NMR structures.
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  • Hover over Ligand to view the full ligand name. Click Ligand to view the 2D diagram and other detail information of the ligand.
  • Hover over EC number to view the full name of enzymatic activity.
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    # PDB
    (Resolution Å)
    Site # Ligand EC number GO terms UniProt PubMed Binding
    affinity
    402801 5szp:B (3.1) BS09 CA ? GO:0005509 ... Q91XX3 27782885
    402802 5szp:B (3.1) BS10 MAN ? GO:0005509 ... Q91XX3 27782885
    402803 5szp:B (3.1) BS11 MAN ? GO:0005509 ... Q91XX3 27782885
    402804 5szq:A (2.608) BS01 MAN ? GO:0005509 ... Q91XY4 27782885
    402805 5szq:A (2.608) BS02 MAN ? GO:0005509 ... Q91XY4 27782885
    402806 5szq:A (2.608) BS03 MAN ? GO:0005509 ... Q91XY4 27782885
    402807 5szq:A (2.608) BS04 MAN ? GO:0005509 ... Q91XY4 27782885
    402808 5szq:A (2.608) BS05 CA ? GO:0005509 ... Q91XY4 27782885
    402809 5szq:A (2.608) BS06 CA ? GO:0005509 ... Q91XY4 27782885
    402810 5szq:A (2.608) BS07 CA ? GO:0005509 ... Q91XY4 27782885
    402811 5szq:A (2.608) BS08 CA ? GO:0005509 ... Q91XY4 27782885
    402812 5szq:A (2.608) BS09 CA ? GO:0005509 ... Q91XY4 27782885
    402813 5szq:A (2.608) BS10 CA ? GO:0005509 ... Q91XY4 27782885
    402814 5szq:A (2.608) BS11 CA ? GO:0005509 ... Q91XY4 27782885
    402815 5szq:A (2.608) BS12 CA ? GO:0005509 ... Q91XY4 27782885
    402816 5szq:A (2.608) BS13 CA ? GO:0005509 ... Q91XY4 27782885
    402817 5szr:A (2.3) BS01 CA ? GO:0005509 ... Q91XX7 27782885
    402818 5szr:A (2.3) BS02 CA ? GO:0005509 ... Q91XX7 27782885
    402819 5szr:A (2.3) BS03 CA ? GO:0005509 ... Q91XX7 27782885
    402820 5szr:A (2.3) BS04 CA ? GO:0005509 ... Q91XX7 27782885
    402821 5szr:A (2.3) BS05 CA ? GO:0005509 ... Q91XX7 27782885
    402822 5szr:A (2.3) BS06 CA ? GO:0005509 ... Q91XX7 27782885
    402823 5szr:A (2.3) BS07 CA ? GO:0005509 ... Q91XX7 27782885
    402824 5szr:A (2.3) BS08 CA ? GO:0005509 ... Q91XX7 27782885
    402825 5szr:A (2.3) BS09 CA ? GO:0005509 ... Q91XX7 27782885
    402826 5szr:A (2.3) BS10 MAN ? GO:0005509 ... Q91XX7 27782885
    402827 5szr:A (2.3) BS11 MAN ? GO:0005509 ... Q91XX7 27782885
    402828 5szr:A (2.3) BS12 MAN ? GO:0005509 ... Q91XX7 27782885
    402829 5szr:A (2.3) BS13 MAN ? GO:0005509 ... Q91XX7 27782885
    402830 5szr:B (2.3) BS01 CA ? GO:0005509 ... Q91XX7 27782885
    402831 5szr:B (2.3) BS02 CA ? GO:0005509 ... Q91XX7 27782885
    402832 5szr:B (2.3) BS03 CA ? GO:0005509 ... Q91XX7 27782885
    402833 5szr:B (2.3) BS04 CA ? GO:0005509 ... Q91XX7 27782885
    402834 5szr:B (2.3) BS05 CA ? GO:0005509 ... Q91XX7 27782885
    402835 5szr:B (2.3) BS06 CA ? GO:0005509 ... Q91XX7 27782885
    402836 5szr:B (2.3) BS07 CA ? GO:0005509 ... Q91XX7 27782885
    402837 5szr:B (2.3) BS08 CA ? GO:0005509 ... Q91XX7 27782885
    402838 5szr:B (2.3) BS09 CA ? GO:0005509 ... Q91XX7 27782885
    402839 5szr:B (2.3) BS10 MAN ? GO:0005509 ... Q91XX7 27782885
    402840 5szr:B (2.3) BS11 MAN ? GO:0005509 ... Q91XX7 27782885
    402841 5szr:B (2.3) BS12 MAN ? GO:0005509 ... Q91XX7 27782885
    402842 5szr:B (2.3) BS13 MAN ? GO:0005509 ... Q91XX7 27782885
    402843 5szr:B (2.3) BS14 MAN ? GO:0005509 ... Q91XX7 27782885
    402844 5szr:C (2.3) BS01 CA ? GO:0005509 ... Q91XX7 27782885
    402845 5szr:C (2.3) BS02 CA ? GO:0005509 ... Q91XX7 27782885
    402846 5szr:C (2.3) BS03 CA ? GO:0005509 ... Q91XX7 27782885
    402847 5szr:C (2.3) BS04 CA ? GO:0005509 ... Q91XX7 27782885
    402848 5szr:C (2.3) BS05 CA ? GO:0005509 ... Q91XX7 27782885
    402849 5szr:C (2.3) BS06 CA ? GO:0005509 ... Q91XX7 27782885
    402850 5szr:C (2.3) BS07 CA ? GO:0005509 ... Q91XX7 27782885
    402851 5szr:C (2.3) BS08 CA ? GO:0005509 ... Q91XX7 27782885
    402852 5szr:C (2.3) BS09 CA ? GO:0005509 ... Q91XX7 27782885
    402853 5szr:C (2.3) BS10 MAN ? GO:0005509 ... Q91XX7 27782885
    402854 5szr:C (2.3) BS11 MAN ? GO:0005509 ... Q91XX7 27782885
    402855 5szr:C (2.3) BS12 MAN ? GO:0005509 ... Q91XX7 27782885
    402856 5szr:C (2.3) BS13 MAN ? GO:0005509 ... Q91XX7 27782885
    402857 5szr:C (2.3) BS14 MAN ? GO:0005509 ... Q91XX7 27782885
    402858 5szt:A (1.8) BS01 dna 2.7.7.7 GO:0001882 ... P19821 27901305
    402859 5szt:A (1.8) BS02 dna 2.7.7.7 GO:0001882 ... P19821 27901305
    402860 5szt:A (1.8) BS03 MG 2.7.7.7 GO:0001882 ... P19821 27901305
    402861 5szt:A (1.8) BS04 MG 2.7.7.7 GO:0001882 ... P19821 27901305
    402862 5szt:A (1.8) BS05 72J 2.7.7.7 GO:0001882 ... P19821 27901305
    402863 5szu:A (2.8) BS01 COA 3.1.2.- GO:0005737 ... A0A0Y5D4F5 28972175
    402864 5szu:A (2.8) BS02 COA 3.1.2.- GO:0005737 ... A0A0Y5D4F5 28972175
    402865 5szu:B (2.8) BS01 COA 3.1.2.- GO:0005737 ... A0A0Y5D4F5 28972175
    402866 5szu:B (2.8) BS02 COA 3.1.2.- GO:0005737 ... A0A0Y5D4F5 28972175
    402867 5szu:D (2.8) BS01 COA 3.1.2.- GO:0005737 ... A0A0Y5D4F5 28972175
    402868 5szu:D (2.8) BS02 COA 3.1.2.- GO:0005737 ... A0A0Y5D4F5 28972175
    402869 5szv:A (2.0) BS01 COA 3.1.2.- GO:0005737 ... A0A0Y5D4F5 28972175
    402870 5szv:A (2.0) BS02 COA 3.1.2.- GO:0005737 ... A0A0Y5D4F5 28972175
    402871 5szv:B (2.0) BS01 COA 3.1.2.- GO:0005737 ... A0A0Y5D4F5 28972175
    402872 5szv:B (2.0) BS02 COA 3.1.2.- GO:0005737 ... A0A0Y5D4F5 28972175
    402873 5szv:C (2.0) BS01 COA 3.1.2.- GO:0005737 ... A0A0Y5D4F5 28972175
    402874 5szv:C (2.0) BS02 COA 3.1.2.- GO:0005737 ... A0A0Y5D4F5 28972175
    402875 5szv:D (2.0) BS01 COA 3.1.2.- GO:0005737 ... A0A0Y5D4F5 28972175
    402876 5szv:D (2.0) BS02 COA 3.1.2.- GO:0005737 ... A0A0Y5D4F5 28972175
    402877 5szx:A (2.251) BS01 dna ? GO:0003700 ... P03206 28158710
    402878 5szx:A (2.251) BS02 dna ? GO:0003700 ... P03206 28158710
    402879 5szx:B (2.251) BS01 dna ? GO:0003700 ... P03206 28158710
    402880 5szx:B (2.251) BS02 dna ? GO:0003700 ... P03206 28158710
    402881 5szy:A (2.0) BS01 GDP 3.1.2.- GO:0005737 ... A0A0Y5D4F5 28972175
    402882 5szy:A (2.0) BS02 COA 3.1.2.- GO:0005737 ... A0A0Y5D4F5 28972175
    402883 5szy:B (2.0) BS01 GDP 3.1.2.- GO:0005737 ... A0A0Y5D4F5 28972175
    402884 5szy:B (2.0) BS02 COA 3.1.2.- GO:0005737 ... A0A0Y5D4F5 28972175
    402885 5szy:B (2.0) BS03 COA 3.1.2.- GO:0005737 ... A0A0Y5D4F5 28972175
    402886 5szy:C (2.0) BS01 GDP 3.1.2.- GO:0005737 ... A0A0Y5D4F5 28972175
    402887 5szy:C (2.0) BS02 COA 3.1.2.- GO:0005737 ... A0A0Y5D4F5 28972175
    402888 5szy:D (2.0) BS01 COA 3.1.2.- GO:0005737 ... A0A0Y5D4F5 28972175
    402889 5szy:D (2.0) BS02 GDP 3.1.2.- GO:0005737 ... A0A0Y5D4F5 28972175
    402890 5szy:D (2.0) BS03 COA 3.1.2.- GO:0005737 ... A0A0Y5D4F5 28972175
    402891 5szz:A (2.3) BS01 GDP 3.1.2.- GO:0005737 ... A0A0Y5D4F5 28972175
    402892 5szz:A (2.3) BS02 COA 3.1.2.- GO:0005737 ... A0A0Y5D4F5 28972175
    402893 5szz:A (2.3) BS03 COA 3.1.2.- GO:0005737 ... A0A0Y5D4F5 28972175
    402894 5szz:B (2.3) BS01 COA 3.1.2.- GO:0005737 ... A0A0Y5D4F5 28972175
    402895 5szz:B (2.3) BS02 GDP 3.1.2.- GO:0005737 ... A0A0Y5D4F5 28972175
    402896 5szz:B (2.3) BS03 COA 3.1.2.- GO:0005737 ... A0A0Y5D4F5 28972175
    402897 5szz:C (2.3) BS01 GDP 3.1.2.- GO:0005737 ... A0A0Y5D4F5 28972175
    402898 5szz:C (2.3) BS02 COA 3.1.2.- GO:0005737 ... A0A0Y5D4F5 28972175
    402899 5szz:D (2.3) BS01 GDP 3.1.2.- GO:0005737 ... A0A0Y5D4F5 28972175
    402900 5szz:D (2.3) BS02 COA 3.1.2.- GO:0005737 ... A0A0Y5D4F5 28972175
    402901 5t00:A (2.19) BS01 dna ? N/A P49711 28529057
    402902 5t00:A (2.19) BS02 dna ? N/A P49711 28529057
    402903 5t00:A (2.19) BS03 ZN ? N/A P49711 28529057
    402904 5t00:A (2.19) BS04 ZN ? N/A P49711 28529057
    402905 5t00:A (2.19) BS05 ZN ? N/A P49711 28529057
    402906 5t00:A (2.19) BS06 ZN ? N/A P49711 28529057
    402907 5t00:A (2.19) BS07 ZN ? N/A P49711 28529057
    402908 5t00:D (2.19) BS01 dna ? N/A P49711 28529057
    402909 5t00:D (2.19) BS02 dna ? N/A P49711 28529057
    402910 5t00:D (2.19) BS03 ZN ? N/A P49711 28529057
    402911 5t00:D (2.19) BS04 ZN ? N/A P49711 28529057
    402912 5t00:D (2.19) BS05 ZN ? N/A P49711 28529057
    402913 5t00:D (2.19) BS06 ZN ? N/A P49711 28529057
    402914 5t00:D (2.19) BS07 ZN ? N/A P49711 28529057
    402915 5t01:A (1.89) BS01 dna ? GO:0003677 ... P05412 28158710
    402916 5t01:A (1.89) BS02 dna ? GO:0003677 ... P05412 28158710
    402917 5t01:B (1.89) BS01 dna ? GO:0003677 ... P05412 28158710
    402918 5t01:B (1.89) BS02 dna ? GO:0003677 ... P05412 28158710
    402919 5t02:A (2.8) BS01 GDP 3.1.2.- GO:0005737 ... A0A0Y5D4F5 28972175
    402920 5t02:A (2.8) BS02 COA 3.1.2.- GO:0005737 ... A0A0Y5D4F5 28972175
    402921 5t02:B (2.8) BS01 GDP 3.1.2.- GO:0005737 ... A0A0Y5D4F5 28972175
    402922 5t02:B (2.8) BS02 COA 3.1.2.- GO:0005737 ... A0A0Y5D4F5 28972175
    402923 5t02:B (2.8) BS03 COA 3.1.2.- GO:0005737 ... A0A0Y5D4F5 28972175
    402924 5t02:C (2.8) BS01 COA 3.1.2.- GO:0005737 ... A0A0Y5D4F5 28972175
    402925 5t02:C (2.8) BS02 GDP 3.1.2.- GO:0005737 ... A0A0Y5D4F5 28972175
    402926 5t02:C (2.8) BS03 COA 3.1.2.- GO:0005737 ... A0A0Y5D4F5 28972175
    402927 5t02:D (2.8) BS01 GDP 3.1.2.- GO:0005737 ... A0A0Y5D4F5 28972175
    402928 5t02:D (2.8) BS02 COA 3.1.2.- GO:0005737 ... A0A0Y5D4F5 28972175
    402929 5t02:E (2.8) BS01 GDP 3.1.2.- GO:0005737 ... A0A0Y5D4F5 28972175
    402930 5t02:E (2.8) BS02 COA 3.1.2.- GO:0005737 ... A0A0Y5D4F5 28972175
    402931 5t02:F (2.8) BS01 GDP 3.1.2.- GO:0005737 ... A0A0Y5D4F5 28972175
    402932 5t02:F (2.8) BS02 COA 3.1.2.- GO:0005737 ... A0A0Y5D4F5 28972175
    402933 5t03:A (2.1) BS01 GNS 2.8.2.- GO:0005515 ... P0AEX9 28103688
    402934 5t03:A (2.1) BS02 BDP 2.8.2.- GO:0005515 ... P0AEX9 28103688
    402935 5t03:A (2.1) BS03 GNS 2.8.2.- GO:0005515 ... P0AEX9 28103688
    402936 5t03:A (2.1) BS04 GLC 2.8.2.- GO:0005515 ... P0AEX9 28103688
    402937 5t03:A (2.1) BS05 GLC 2.8.2.- GO:0005515 ... P0AEX9 28103688
    402938 5t03:A (2.1) BS06 GLC 2.8.2.- GO:0005515 ... P0AEX9 28103688
    402939 5t03:A (2.1) BS07 GLC 2.8.2.- GO:0005515 ... P0AEX9 28103688
    402940 5t03:A (2.1) BS08 A3P 2.8.2.- GO:0005515 ... P0AEX9 28103688
    402941 5t03:B (2.1) BS01 BDP 2.8.2.- GO:0005515 ... P0AEX9 28103688
    402942 5t03:B (2.1) BS02 GNS 2.8.2.- GO:0005515 ... P0AEX9 28103688
    402943 5t03:B (2.1) BS03 GLC 2.8.2.- GO:0005515 ... P0AEX9 28103688
    402944 5t03:B (2.1) BS04 GLC 2.8.2.- GO:0005515 ... P0AEX9 28103688
    402945 5t03:B (2.1) BS05 GLC 2.8.2.- GO:0005515 ... P0AEX9 28103688
    402946 5t03:B (2.1) BS06 GLC 2.8.2.- GO:0005515 ... P0AEX9 28103688
    402947 5t03:B (2.1) BS07 A3P 2.8.2.- GO:0005515 ... P0AEX9 28103688
    402948 5t04:A (3.3) BS01 peptide 3.2.1.17 GO:0003796 ... P00720
    P20789
    27924846
    402949 5t04:A (3.3) BS02 TCE 3.2.1.17 GO:0003796 ... P00720
    P20789
    27924846
    402950 5t05:A (1.952) BS01 GNS 2.8.2.- GO:0005515 ... P0AEX9 28103688
    402951 5t05:A (1.952) BS02 BDP 2.8.2.- GO:0005515 ... P0AEX9 28103688
    402952 5t05:A (1.952) BS03 GNS 2.8.2.- GO:0005515 ... P0AEX9 28103688
    402953 5t05:A (1.952) BS04 GLC 2.8.2.- GO:0005515 ... P0AEX9 28103688
    402954 5t05:A (1.952) BS05 GLC 2.8.2.- GO:0005515 ... P0AEX9 28103688
    402955 5t05:A (1.952) BS06 GLC 2.8.2.- GO:0005515 ... P0AEX9 28103688
    402956 5t05:A (1.952) BS07 GLC 2.8.2.- GO:0005515 ... P0AEX9 28103688
    402957 5t05:A (1.952) BS08 A3P 2.8.2.- GO:0005515 ... P0AEX9 28103688
    402958 5t05:B (1.952) BS01 GNS 2.8.2.- GO:0005515 ... P0AEX9 28103688
    402959 5t05:B (1.952) BS02 BDP 2.8.2.- GO:0005515 ... P0AEX9 28103688
    402960 5t05:B (1.952) BS03 GNS 2.8.2.- GO:0005515 ... P0AEX9 28103688
    402961 5t05:B (1.952) BS04 GLC 2.8.2.- GO:0005515 ... P0AEX9 28103688
    402962 5t05:B (1.952) BS05 GLC 2.8.2.- GO:0005515 ... P0AEX9 28103688
    402963 5t05:B (1.952) BS06 GLC 2.8.2.- GO:0005515 ... P0AEX9 28103688
    402964 5t05:B (1.952) BS07 GLC 2.8.2.- GO:0005515 ... P0AEX9 28103688
    402965 5t05:B (1.952) BS08 A3P 2.8.2.- GO:0005515 ... P0AEX9 28103688
    402966 5t06:A (1.898) BS01 HXC 3.1.2.- GO:0005515 ... P0A8Z3 N/A
    402967 5t06:C (1.898) BS01 HXC 3.1.2.- GO:0005515 ... P0A8Z3 N/A
    402968 5t07:A (1.717) BS01 MFK 3.1.2.- GO:0005515 ... P0A8Z3 N/A
    402969 5t07:A (1.717) BS02 MFK 3.1.2.- GO:0005515 ... P0A8Z3 N/A
    402970 5t07:B (1.717) BS01 MFK 3.1.2.- GO:0005515 ... P0A8Z3 N/A
    402971 5t07:C (1.717) BS01 MFK 3.1.2.- GO:0005515 ... P0A8Z3 N/A
    402972 5t07:D (1.717) BS01 MFK 3.1.2.- GO:0005515 ... P0A8Z3 N/A
    402973 5t07:D (1.717) BS02 MFK 3.1.2.- GO:0005515 ... P0A8Z3 N/A
    402974 5t0a:A (1.95) BS01 GNS 2.8.2.- GO:0005515 ... P0AEX9 28103688
    402975 5t0a:A (1.95) BS02 BDP 2.8.2.- GO:0005515 ... P0AEX9 28103688
    402976 5t0a:A (1.95) BS03 GNS 2.8.2.- GO:0005515 ... P0AEX9 28103688
    402977 5t0a:A (1.95) BS04 GLC 2.8.2.- GO:0005515 ... P0AEX9 28103688
    402978 5t0a:A (1.95) BS05 GLC 2.8.2.- GO:0005515 ... P0AEX9 28103688
    402979 5t0a:A (1.95) BS06 GLC 2.8.2.- GO:0005515 ... P0AEX9 28103688
    402980 5t0a:A (1.95) BS07 GLC 2.8.2.- GO:0005515 ... P0AEX9 28103688
    402981 5t0a:A (1.95) BS08 A3P 2.8.2.- GO:0005515 ... P0AEX9 28103688
    402982 5t0a:B (1.95) BS01 GNS 2.8.2.- GO:0005515 ... P0AEX9 28103688
    402983 5t0a:B (1.95) BS02 BDP 2.8.2.- GO:0005515 ... P0AEX9 28103688
    402984 5t0a:B (1.95) BS03 GNS 2.8.2.- GO:0005515 ... P0AEX9 28103688
    402985 5t0a:B (1.95) BS04 BDP 2.8.2.- GO:0005515 ... P0AEX9 28103688
    402986 5t0a:B (1.95) BS05 GLC 2.8.2.- GO:0005515 ... P0AEX9 28103688
    402987 5t0a:B (1.95) BS06 GLC 2.8.2.- GO:0005515 ... P0AEX9 28103688
    402988 5t0a:B (1.95) BS07 GLC 2.8.2.- GO:0005515 ... P0AEX9 28103688
    402989 5t0a:B (1.95) BS08 GLC 2.8.2.- GO:0005515 ... P0AEX9 28103688
    402990 5t0a:B (1.95) BS09 A3P 2.8.2.- GO:0005515 ... P0AEX9 28103688
    402991 5t0b:A (2.001) BS01 SIA ? GO:0016020 ... A0A0J9X268 28694323
    402992 5t0c:AA (3.8) BS01 ATP ? GO:0000502 ... P35998 27791164
    402993 5t0c:AB (3.8) BS01 ADP ? GO:0000502 ... P62191 27791164
    402994 5t0c:AC (3.8) BS01 ADP ? GO:0000502 ... P62195 27791164
    402995 5t0c:AD (3.8) BS01 ATP ? GO:0000502 ... P43686 27791164
    402996 5t0c:AE (3.8) BS01 ATP ? GO:0000502 ... P62333 27791164
    402997 5t0c:AE (3.8) BS02 ATP ? GO:0000502 ... P62333 27791164
    402998 5t0c:AF (3.8) BS01 ATP ? GO:0000502 ... P17980 27791164
    402999 5t0c:AF (3.8) BS02 ATP ? GO:0000502 ... P17980 27791164
    403000 5t0c:Ac (3.8) BS01 ZN 3.4.19.- GO:0000502 ... O00487 27791164

    Reference:
  • Chengxin Zhang, Xi Zhang, Lydia Freddolino, and Yang Zhang. BioLiP2: an updated structure database for biologically relevent ligand-protein interactions, Nucleic Acids Research, gkad630 (2023).
  • Jianyi Yang, Ambrish Roy, and Yang Zhang. BioLiP: a semi-manually curated database for biologically relevant ligand-protein interactions, Nucleic Acids Research, 41: D1096-D1103 (2013) (download the PDF file).