SEQ2FUN

BioLiP
Download all results in tab-seperated text for 942758 receptor-ligand interactions, whose format is explained at readme.txt.
  • Hover over PDB to view the title of the structure. Click PDB to view the structure at the RCSB PDB database. Resolution -1.00 means the resolution is unavailable, e.g., for NMR structures.
  • Click Site # to view the binding site structure. Hover over Site # to view the binding residues.
  • Hover over Ligand to view the full ligand name. Click Ligand to view the 2D diagram and other detail information of the ligand.
  • Hover over EC number to view the full name of enzymatic activity.
  • Hover over GO terms to view all GO terms.
  • Hover over UniProt to view the protein name.
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    # PDB
    (Resolution Å)
    Site # Ligand EC number GO terms UniProt PubMed Binding
    affinity
    404001 5t61:D (2.55) BS02 MGD N/A GO:0016491 ... N/A 27846502
    404002 5t61:E (2.55) BS01 SF4 N/A N/A N/A 27846502
    404003 5t61:E (2.55) BS02 SF4 N/A N/A N/A 27846502
    404004 5t61:F (2.55) BS01 SF4 N/A N/A N/A 27846502
    404005 5t61:F (2.55) BS02 SF4 N/A N/A N/A 27846502
    404006 5t61:F (2.55) BS03 SF4 N/A N/A N/A 27846502
    404007 5t61:F (2.55) BS04 SF4 N/A N/A N/A 27846502
    404008 5t61:F (2.55) BS05 SF4 N/A N/A N/A 27846502
    404009 5t61:F (2.55) BS06 SF4 N/A N/A N/A 27846502
    404010 5t61:F (2.55) BS07 SF4 N/A N/A N/A 27846502
    404011 5t61:F (2.55) BS08 SF4 N/A N/A N/A 27846502
    404012 5t61:F (2.55) BS09 SF4 N/A N/A N/A 27846502
    404013 5t61:G (2.55) BS01 ZN N/A GO:0016810 ... N/A 27846502
    404014 5t61:G (2.55) BS02 ZN N/A GO:0016810 ... N/A 27846502
    404015 5t61:G (2.55) BS03 MFN N/A GO:0016810 ... N/A 27846502
    404016 5t61:H (2.55) BS01 SF4 N/A GO:0015948 ... N/A 27846502
    404017 5t61:H (2.55) BS02 MGD N/A GO:0015948 ... N/A 27846502
    404018 5t61:H (2.55) BS03 MGD N/A GO:0015948 ... N/A 27846502
    404019 5t61:I (2.55) BS01 MG N/A GO:0015948 ... N/A 27846502
    404020 5t61:J (2.55) BS01 MGD N/A GO:0016491 ... N/A 27846502
    404021 5t61:J (2.55) BS02 MGD N/A GO:0016491 ... N/A 27846502
    404022 5t61:K (2.55) BS01 SF4 N/A N/A N/A 27846502
    404023 5t61:K (2.55) BS02 SF4 N/A N/A N/A 27846502
    404024 5t61:L (2.55) BS01 SF4 N/A N/A N/A 27846502
    404025 5t61:L (2.55) BS02 SF4 N/A N/A N/A 27846502
    404026 5t61:L (2.55) BS03 SF4 N/A N/A N/A 27846502
    404027 5t61:L (2.55) BS04 SF4 N/A N/A N/A 27846502
    404028 5t61:L (2.55) BS05 SF4 N/A N/A N/A 27846502
    404029 5t61:L (2.55) BS06 SF4 N/A N/A N/A 27846502
    404030 5t61:L (2.55) BS07 SF4 N/A N/A N/A 27846502
    404031 5t61:L (2.55) BS08 SF4 N/A N/A N/A 27846502
    404032 5t61:L (2.55) BS09 SF4 N/A N/A N/A 27846502
    404033 5t61:M (2.55) BS01 ZN N/A GO:0016810 ... N/A 27846502
    404034 5t61:M (2.55) BS02 ZN N/A GO:0016810 ... N/A 27846502
    404035 5t61:M (2.55) BS03 MFN N/A GO:0016810 ... N/A 27846502
    404036 5t61:N (2.55) BS01 SF4 N/A GO:0015948 ... N/A 27846502
    404037 5t61:N (2.55) BS02 MGD N/A GO:0015948 ... N/A 27846502
    404038 5t61:N (2.55) BS03 MGD N/A GO:0015948 ... N/A 27846502
    404039 5t61:O (2.55) BS01 MG N/A GO:0015948 ... N/A 27846502
    404040 5t61:P (2.55) BS01 MGD N/A GO:0016491 ... N/A 27846502
    404041 5t61:P (2.55) BS02 MGD N/A GO:0016491 ... N/A 27846502
    404042 5t61:Q (2.55) BS01 SF4 N/A N/A N/A 27846502
    404043 5t61:Q (2.55) BS02 SF4 N/A N/A N/A 27846502
    404044 5t61:R (2.55) BS01 SF4 N/A N/A N/A 27846502
    404045 5t61:R (2.55) BS02 SF4 N/A N/A N/A 27846502
    404046 5t61:R (2.55) BS03 SF4 N/A N/A N/A 27846502
    404047 5t61:R (2.55) BS04 SF4 N/A N/A N/A 27846502
    404048 5t61:R (2.55) BS05 SF4 N/A N/A N/A 27846502
    404049 5t61:R (2.55) BS06 SF4 N/A N/A N/A 27846502
    404050 5t61:R (2.55) BS07 SF4 N/A N/A N/A 27846502
    404051 5t61:R (2.55) BS08 SF4 N/A N/A N/A 27846502
    404052 5t61:R (2.55) BS09 SF4 N/A N/A N/A 27846502
    404053 5t61:S (2.55) BS01 ZN N/A GO:0016810 ... N/A 27846502
    404054 5t61:S (2.55) BS02 ZN N/A GO:0016810 ... N/A 27846502
    404055 5t61:S (2.55) BS03 MFN N/A GO:0016810 ... N/A 27846502
    404056 5t61:T (2.55) BS01 SF4 N/A GO:0015948 ... N/A 27846502
    404057 5t61:T (2.55) BS02 MGD N/A GO:0015948 ... N/A 27846502
    404058 5t61:T (2.55) BS03 MGD N/A GO:0015948 ... N/A 27846502
    404059 5t61:U (2.55) BS01 MG N/A GO:0015948 ... N/A 27846502
    404060 5t61:V (2.55) BS01 MGD N/A GO:0016491 ... N/A 27846502
    404061 5t61:V (2.55) BS02 MGD N/A GO:0016491 ... N/A 27846502
    404062 5t61:W (2.55) BS01 SF4 N/A N/A N/A 27846502
    404063 5t61:W (2.55) BS02 SF4 N/A N/A N/A 27846502
    404064 5t61:X (2.55) BS01 SF4 N/A N/A N/A 27846502
    404065 5t61:X (2.55) BS02 SF4 N/A N/A N/A 27846502
    404066 5t61:X (2.55) BS03 SF4 N/A N/A N/A 27846502
    404067 5t61:X (2.55) BS04 SF4 N/A N/A N/A 27846502
    404068 5t61:X (2.55) BS05 SF4 N/A N/A N/A 27846502
    404069 5t61:X (2.55) BS06 SF4 N/A N/A N/A 27846502
    404070 5t61:X (2.55) BS07 SF4 N/A N/A N/A 27846502
    404071 5t61:X (2.55) BS08 SF4 N/A N/A N/A 27846502
    404072 5t61:X (2.55) BS09 SF4 N/A N/A N/A 27846502
    404073 5t61:Y (2.55) BS01 ZN N/A GO:0016810 ... N/A 27846502
    404074 5t61:Y (2.55) BS02 ZN N/A GO:0016810 ... N/A 27846502
    404075 5t61:Y (2.55) BS03 MFN N/A GO:0016810 ... N/A 27846502
    404076 5t61:Z (2.55) BS01 SF4 N/A GO:0015948 ... N/A 27846502
    404077 5t61:Z (2.55) BS02 MGD N/A GO:0015948 ... N/A 27846502
    404078 5t61:Z (2.55) BS03 MGD N/A GO:0015948 ... N/A 27846502
    404079 5t61:a (2.55) BS01 MG N/A GO:0015948 ... N/A 27846502
    404080 5t61:b (2.55) BS01 MGD N/A GO:0016491 ... N/A 27846502
    404081 5t61:b (2.55) BS02 MGD N/A GO:0016491 ... N/A 27846502
    404082 5t61:c (2.55) BS01 SF4 N/A N/A N/A 27846502
    404083 5t61:c (2.55) BS02 SF4 N/A N/A N/A 27846502
    404084 5t61:d (2.55) BS01 SF4 N/A N/A N/A 27846502
    404085 5t61:d (2.55) BS02 SF4 N/A N/A N/A 27846502
    404086 5t61:d (2.55) BS03 SF4 N/A N/A N/A 27846502
    404087 5t61:d (2.55) BS04 SF4 N/A N/A N/A 27846502
    404088 5t61:d (2.55) BS05 SF4 N/A N/A N/A 27846502
    404089 5t61:d (2.55) BS06 SF4 N/A N/A N/A 27846502
    404090 5t61:d (2.55) BS07 SF4 N/A N/A N/A 27846502
    404091 5t61:d (2.55) BS08 SF4 N/A N/A N/A 27846502
    404092 5t61:d (2.55) BS09 SF4 N/A N/A N/A 27846502
    404093 5t61:e (2.55) BS01 ZN N/A GO:0016810 ... N/A 27846502
    404094 5t61:e (2.55) BS02 ZN N/A GO:0016810 ... N/A 27846502
    404095 5t61:e (2.55) BS03 MFN N/A GO:0016810 ... N/A 27846502
    404096 5t61:f (2.55) BS01 SF4 N/A GO:0015948 ... N/A 27846502
    404097 5t61:f (2.55) BS02 MGD N/A GO:0015948 ... N/A 27846502
    404098 5t61:f (2.55) BS03 MGD N/A GO:0015948 ... N/A 27846502
    404099 5t61:g (2.55) BS01 MG N/A GO:0015948 ... N/A 27846502
    404100 5t61:h (2.55) BS01 MGD N/A GO:0016491 ... N/A 27846502
    404101 5t61:h (2.55) BS02 MGD N/A GO:0016491 ... N/A 27846502
    404102 5t61:i (2.55) BS01 SF4 N/A N/A N/A 27846502
    404103 5t61:i (2.55) BS02 SF4 N/A N/A N/A 27846502
    404104 5t61:j (2.55) BS01 SF4 N/A N/A N/A 27846502
    404105 5t61:j (2.55) BS02 SF4 N/A N/A N/A 27846502
    404106 5t61:j (2.55) BS03 SF4 N/A N/A N/A 27846502
    404107 5t61:j (2.55) BS04 SF4 N/A N/A N/A 27846502
    404108 5t61:j (2.55) BS05 SF4 N/A N/A N/A 27846502
    404109 5t61:j (2.55) BS06 SF4 N/A N/A N/A 27846502
    404110 5t61:j (2.55) BS07 SF4 N/A N/A N/A 27846502
    404111 5t61:j (2.55) BS08 SF4 N/A N/A N/A 27846502
    404112 5t61:j (2.55) BS09 SF4 N/A N/A N/A 27846502
    404113 5t61:k (2.55) BS01 ZN N/A GO:0016810 ... N/A 27846502
    404114 5t61:k (2.55) BS02 ZN N/A GO:0016810 ... N/A 27846502
    404115 5t61:k (2.55) BS03 MFN N/A GO:0016810 ... N/A 27846502
    404116 5t61:l (2.55) BS01 SF4 N/A GO:0015948 ... N/A 27846502
    404117 5t61:l (2.55) BS02 MGD N/A GO:0015948 ... N/A 27846502
    404118 5t61:l (2.55) BS03 MGD N/A GO:0015948 ... N/A 27846502
    404119 5t61:m (2.55) BS01 MG N/A GO:0015948 ... N/A 27846502
    404120 5t61:n (2.55) BS01 MGD N/A GO:0016491 ... N/A 27846502
    404121 5t61:n (2.55) BS02 MGD N/A GO:0016491 ... N/A 27846502
    404122 5t61:o (2.55) BS01 SF4 N/A N/A N/A 27846502
    404123 5t61:o (2.55) BS02 SF4 N/A N/A N/A 27846502
    404124 5t61:p (2.55) BS01 SF4 N/A N/A N/A 27846502
    404125 5t61:p (2.55) BS02 SF4 N/A N/A N/A 27846502
    404126 5t61:p (2.55) BS03 SF4 N/A N/A N/A 27846502
    404127 5t61:p (2.55) BS04 SF4 N/A N/A N/A 27846502
    404128 5t61:p (2.55) BS05 SF4 N/A N/A N/A 27846502
    404129 5t61:p (2.55) BS06 SF4 N/A N/A N/A 27846502
    404130 5t61:p (2.55) BS07 SF4 N/A N/A N/A 27846502
    404131 5t61:p (2.55) BS08 SF4 N/A N/A N/A 27846502
    404132 5t61:p (2.55) BS09 SF4 N/A N/A N/A 27846502
    404133 5t61:q (2.55) BS01 ZN N/A GO:0016810 ... N/A 27846502
    404134 5t61:q (2.55) BS02 ZN N/A GO:0016810 ... N/A 27846502
    404135 5t61:q (2.55) BS03 MFN N/A GO:0016810 ... N/A 27846502
    404136 5t61:r (2.55) BS01 SF4 N/A GO:0015948 ... N/A 27846502
    404137 5t61:r (2.55) BS02 MGD N/A GO:0015948 ... N/A 27846502
    404138 5t61:r (2.55) BS03 MGD N/A GO:0015948 ... N/A 27846502
    404139 5t61:s (2.55) BS01 MG N/A GO:0015948 ... N/A 27846502
    404140 5t61:t (2.55) BS01 MGD N/A GO:0016491 ... N/A 27846502
    404141 5t61:t (2.55) BS02 MGD N/A GO:0016491 ... N/A 27846502
    404142 5t61:u (2.55) BS01 SF4 N/A N/A N/A 27846502
    404143 5t61:u (2.55) BS02 SF4 N/A N/A N/A 27846502
    404144 5t61:v (2.55) BS01 SF4 N/A N/A N/A 27846502
    404145 5t61:v (2.55) BS02 SF4 N/A N/A N/A 27846502
    404146 5t61:v (2.55) BS03 SF4 N/A N/A N/A 27846502
    404147 5t61:v (2.55) BS04 SF4 N/A N/A N/A 27846502
    404148 5t61:v (2.55) BS05 SF4 N/A N/A N/A 27846502
    404149 5t61:v (2.55) BS06 SF4 N/A N/A N/A 27846502
    404150 5t61:v (2.55) BS07 SF4 N/A N/A N/A 27846502
    404151 5t61:v (2.55) BS08 SF4 N/A N/A N/A 27846502
    404152 5t61:v (2.55) BS09 SF4 N/A N/A N/A 27846502
    404153 5t62:D (3.3) BS01 rna ? GO:0002181 ... P0CX45 28179369
    404154 5t62:E (3.3) BS01 rna ? GO:0000027 ... P14126 28179369
    404155 5t62:F (3.3) BS01 rna ? GO:0002181 ... P10664 28179369
    404156 5t62:F (3.3) BS02 rna ? GO:0002181 ... P10664 28179369
    404157 5t62:G (3.3) BS01 rna ? GO:0000027 ... P26321 28179369
    404158 5t62:G (3.3) BS02 rna ? GO:0000027 ... P26321 28179369
    404159 5t62:H (3.3) BS01 rna ? GO:0000027 ... Q02326 28179369
    404160 5t62:I (3.3) BS01 rna ? GO:0000463 ... P05737 28179369
    404161 5t62:I (3.3) BS02 rna ? GO:0000463 ... P05737 28179369
    404162 5t62:J (3.3) BS01 rna ? GO:0000470 ... P17076 28179369
    404163 5t62:J (3.3) BS02 rna ? GO:0000470 ... P17076 28179369
    404164 5t62:K (3.3) BS01 rna ? GO:0002181 ... P05738 28179369
    404165 5t62:L (3.3) BS01 rna ? GO:0000027 ... P41805 28179369
    404166 5t62:L (3.3) BS02 rna ? GO:0000027 ... P41805 28179369
    404167 5t62:M (3.3) BS01 rna ? GO:0000027 ... P0C0W9 28179369
    404168 5t62:M (3.3) BS02 rna ? GO:0000027 ... P0C0W9 28179369
    404169 5t62:N (3.3) BS01 rna ? GO:0002181 ... Q12690 28179369
    404170 5t62:O (3.3) BS01 rna ? GO:0000027 ... P36105 28179369
    404171 5t62:Q (3.3) BS01 rna ? GO:0002181 ... P0CX27 28179369
    404172 5t62:R (3.3) BS01 rna ? GO:0002181 ... P0CX25 28179369
    404173 5t62:S (3.3) BS01 rna N/A N/A N/A 28179369
    404174 5t62:V (3.3) BS01 rna ? GO:0000055 ... P38861 28179369
    404175 5t62:W (3.3) BS01 rna 3.6.1.- GO:0000027 ... P53145 28179369
    404176 5t62:W (3.3) BS02 GNP 3.6.1.- GO:0000027 ... P53145 28179369
    404177 5t62:W (3.3) BS03 MG 3.6.1.- GO:0000027 ... P53145 28179369
    404178 5t62:X (3.3) BS01 rna ? GO:0000054 ... Q12522 28179369
    404179 5t62:a (3.3) BS01 rna ? GO:0002181 ... P05748 28179369
    404180 5t62:a (3.3) BS02 rna ? GO:0002181 ... P05748 28179369
    404181 5t62:b (3.3) BS01 rna ? GO:0000470 ... P26784 28179369
    404182 5t62:c (3.3) BS01 rna ? GO:0000448 ... P05740 28179369
    404183 5t62:c (3.3) BS02 rna ? GO:0000448 ... P05740 28179369
    404184 5t62:d (3.3) BS01 rna ? GO:0002181 ... P0CX49 28179369
    404185 5t62:e (3.3) BS01 rna ? GO:0002181 ... P0CX82 28179369
    404186 5t62:f (3.3) BS01 rna ? GO:0002181 ... P0CX23 28179369
    404187 5t62:f (3.3) BS02 rna ? GO:0002181 ... P0CX23 28179369
    404188 5t62:g (3.3) BS01 rna ? GO:0002181 ... Q02753 28179369
    404189 5t62:g (3.3) BS02 rna ? GO:0002181 ... Q02753 28179369
    404190 5t62:h (3.3) BS01 rna ? GO:0002181 ... P05749 28179369
    404191 5t62:i (3.3) BS01 rna ? GO:0002181 ... P0CX41 28179369
    404192 5t62:j (3.3) BS01 rna ? GO:0002181 ... P04449 28179369
    404193 5t62:k (3.3) BS01 rna ? GO:0000027 ... P04456 28179369
    404194 5t62:k (3.3) BS02 rna ? GO:0000027 ... P04456 28179369
    404195 5t62:l (3.3) BS01 rna ? GO:0002181 ... P05743 28179369
    404196 5t62:l (3.3) BS02 rna ? GO:0002181 ... P05743 28179369
    404197 5t62:m (3.3) BS01 rna ? GO:0002181 ... P0C2H6 28179369
    404198 5t62:n (3.3) BS01 rna ? GO:0002181 ... P02406 28179369
    404199 5t62:o (3.3) BS01 rna ? GO:0002181 ... P05747 28179369
    404200 5t62:p (3.3) BS01 rna ? GO:0002181 ... P14120 28179369

    Reference:
  • Chengxin Zhang, Xi Zhang, Lydia Freddolino, and Yang Zhang. BioLiP2: an updated structure database for biologically relevent ligand-protein interactions, Nucleic Acids Research, gkad630 (2023).
  • Jianyi Yang, Ambrish Roy, and Yang Zhang. BioLiP: a semi-manually curated database for biologically relevant ligand-protein interactions, Nucleic Acids Research, 41: D1096-D1103 (2013) (download the PDF file).