SEQ2FUN

BioLiP
Download all results in tab-seperated text for 942758 receptor-ligand interactions, whose format is explained at readme.txt.
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    # PDB
    (Resolution Å)
    Site # Ligand EC number GO terms UniProt PubMed Binding
    affinity
    404601 5t96:C (2.0) BS02 79J ? N/A Q9J0Y0 28320973
    404602 5t96:D (2.0) BS01 79J ? N/A Q9J0Y0 28320973
    404603 5t96:D (2.0) BS02 79J ? N/A Q9J0Y0 28320973
    404604 5t96:E (2.0) BS01 79J ? N/A Q9J0Y0 28320973
    404605 5t96:E (2.0) BS02 79J ? N/A Q9J0Y0 28320973
    404606 5t96:F (2.0) BS01 79J ? N/A Q9J0Y0 28320973
    404607 5t96:F (2.0) BS02 79J ? N/A Q9J0Y0 28320973
    404608 5t97:A (3.0) BS01 782 ? N/A P03372 28296398 BindingDB: IC50=34nM
    404609 5t97:B (3.0) BS01 782 ? N/A P03372 28296398 BindingDB: IC50=34nM
    404610 5t99:A (2.4) BS01 GIF ? GO:0004553 ... A0A2D0TCC8 29535379
    404611 5t99:B (2.4) BS01 GIF ? GO:0004553 ... A0A2D0TCC8 29535379
    404612 5t9b:G (1.62) BS01 CA 3.1.4.46 GO:0005576 ... P37965 27780866
    404613 5t9b:G (1.62) BS02 G3P 3.1.4.46 GO:0005576 ... P37965 27780866
    404614 5t9c:E (1.48) BS01 CA 3.1.4.46 GO:0005576 ... P37965 27780866
    404615 5t9c:E (1.48) BS02 G3P 3.1.4.46 GO:0005576 ... P37965 27780866
    404616 5t9c:E (1.48) BS03 PO4 3.1.4.46 GO:0005576 ... P37965 27780866
    404617 5t9e:A (2.03) BS01 NAP 1.3.1.13 GO:0000166 ... I1MYY4 28671678
    404618 5t9e:B (2.03) BS01 NAP 1.3.1.13 GO:0000166 ... I1MYY4 28671678
    404619 5t9f:A (1.994) BS01 NAP 1.3.1.13 GO:0000166 ... I1MYY4 28671678
    404620 5t9f:A (1.994) BS02 TYR 1.3.1.13 GO:0000166 ... I1MYY4 28671678 MOAD: ic50=4.7mM
    404621 5t9f:B (1.994) BS01 NAP 1.3.1.13 GO:0000166 ... I1MYY4 28671678
    404622 5t9f:B (1.994) BS02 TYR 1.3.1.13 GO:0000166 ... I1MYY4 28671678 MOAD: ic50=4.7mM
    404623 5t9g:A (2.4) BS01 GIF ? GO:0004553 ... A0A2D0TCC9 29535379
    404624 5t9g:B (2.4) BS01 GIF ? GO:0004553 ... A0A2D0TCC9 29535379
    404625 5t9g:C (2.4) BS01 GIF ? GO:0004553 ... A0A2D0TCC9 29535379
    404626 5t9g:D (2.4) BS01 GIF ? GO:0004553 ... A0A2D0TCC9 29535379
    404627 5t9i:A (2.091) BS01 CA 3.4.24.27 GO:0004222 ... P00800 N/A
    404628 5t9i:A (2.091) BS02 CA 3.4.24.27 GO:0004222 ... P00800 N/A
    404629 5t9i:A (2.091) BS03 CA 3.4.24.27 GO:0004222 ... P00800 N/A
    404630 5t9i:A (2.091) BS04 CA 3.4.24.27 GO:0004222 ... P00800 N/A
    404631 5t9i:A (2.091) BS05 ZN 3.4.24.27 GO:0004222 ... P00800 N/A
    404632 5t9i:A (2.091) BS06 VAL 3.4.24.27 GO:0004222 ... P00800 N/A
    404633 5t9i:A (2.091) BS07 LYS 3.4.24.27 GO:0004222 ... P00800 N/A
    404634 5t9j:A (3.00013) BS01 dna 3.1.-.- GO:0003677 ... Q17RS7 26682650
    404635 5t9j:A (3.00013) BS02 dna 3.1.-.- GO:0003677 ... Q17RS7 26682650
    404636 5t9j:B (3.00013) BS01 dna 3.1.-.- GO:0003677 ... Q17RS7 26682650
    404637 5t9j:B (3.00013) BS02 dna 3.1.-.- GO:0003677 ... Q17RS7 26682650
    404638 5t9j:B (3.00013) BS03 MG 3.1.-.- GO:0003677 ... Q17RS7 26682650
    404639 5t9k:A (2.1) BS01 CA 3.4.24.27 GO:0004222 ... P00800 N/A
    404640 5t9k:A (2.1) BS02 CA 3.4.24.27 GO:0004222 ... P00800 N/A
    404641 5t9k:A (2.1) BS03 CA 3.4.24.27 GO:0004222 ... P00800 N/A
    404642 5t9k:A (2.1) BS04 CA 3.4.24.27 GO:0004222 ... P00800 N/A
    404643 5t9k:A (2.1) BS05 ZN 3.4.24.27 GO:0004222 ... P00800 N/A
    404644 5t9k:A (2.1) BS06 VAL 3.4.24.27 GO:0004222 ... P00800 N/A
    404645 5t9k:A (2.1) BS07 LYS 3.4.24.27 GO:0004222 ... P00800 N/A
    404646 5t9m:B (4.0) BS01 ZN ? GO:0003151 ... P11716 27662087
    404647 5t9m:B (4.0) BS02 CA ? GO:0003151 ... P11716 27662087
    404648 5t9m:E (4.0) BS01 ZN ? GO:0003151 ... P11716 27662087
    404649 5t9m:E (4.0) BS02 CA ? GO:0003151 ... P11716 27662087
    404650 5t9m:G (4.0) BS01 ZN ? GO:0003151 ... P11716 27662087
    404651 5t9m:G (4.0) BS02 CA ? GO:0003151 ... P11716 27662087
    404652 5t9m:I (4.0) BS01 ZN ? GO:0003151 ... P11716 27662087
    404653 5t9m:I (4.0) BS02 CA ? GO:0003151 ... P11716 27662087
    404654 5t9n:B (3.8) BS01 ZN ? GO:0003151 ... P11716 27662087
    404655 5t9n:B (3.8) BS02 CA ? GO:0003151 ... P11716 27662087
    404656 5t9n:E (3.8) BS01 ZN ? GO:0003151 ... P11716 27662087
    404657 5t9n:E (3.8) BS02 CA ? GO:0003151 ... P11716 27662087
    404658 5t9n:G (3.8) BS01 ZN ? GO:0003151 ... P11716 27662087
    404659 5t9n:G (3.8) BS02 CA ? GO:0003151 ... P11716 27662087
    404660 5t9n:I (3.8) BS01 ZN ? GO:0003151 ... P11716 27662087
    404661 5t9n:I (3.8) BS02 CA ? GO:0003151 ... P11716 27662087
    404662 5t9q:A (2.1) BS01 CA 3.4.24.27 GO:0004222 ... P00800 N/A
    404663 5t9q:A (2.1) BS02 CA 3.4.24.27 GO:0004222 ... P00800 N/A
    404664 5t9q:A (2.1) BS03 CA 3.4.24.27 GO:0004222 ... P00800 N/A
    404665 5t9q:A (2.1) BS04 CA 3.4.24.27 GO:0004222 ... P00800 N/A
    404666 5t9q:A (2.1) BS05 ZN 3.4.24.27 GO:0004222 ... P00800 N/A
    404667 5t9q:A (2.1) BS06 VAL 3.4.24.27 GO:0004222 ... P00800 N/A
    404668 5t9q:A (2.1) BS07 LYS 3.4.24.27 GO:0004222 ... P00800 N/A
    404669 5t9r:B (5.8) BS01 ZN ? GO:0003151 ... P11716 27662087
    404670 5t9r:B (5.8) BS02 CA ? GO:0003151 ... P11716 27662087
    404671 5t9r:E (5.8) BS01 ZN ? GO:0003151 ... P11716 27662087
    404672 5t9r:E (5.8) BS02 CA ? GO:0003151 ... P11716 27662087
    404673 5t9r:G (5.8) BS01 ZN ? GO:0003151 ... P11716 27662087
    404674 5t9r:G (5.8) BS02 CA ? GO:0003151 ... P11716 27662087
    404675 5t9r:I (5.8) BS01 ZN ? GO:0003151 ... P11716 27662087
    404676 5t9r:I (5.8) BS02 CA ? GO:0003151 ... P11716 27662087
    404677 5t9s:B (4.2) BS01 ZN ? GO:0003151 ... P11716 27662087
    404678 5t9s:B (4.2) BS02 CA ? GO:0003151 ... P11716 27662087
    404679 5t9s:E (4.2) BS01 ZN ? GO:0003151 ... P11716 27662087
    404680 5t9s:E (4.2) BS02 CA ? GO:0003151 ... P11716 27662087
    404681 5t9s:G (4.2) BS01 ZN ? GO:0003151 ... P11716 27662087
    404682 5t9s:G (4.2) BS02 CA ? GO:0003151 ... P11716 27662087
    404683 5t9s:I (4.2) BS01 ZN ? GO:0003151 ... P11716 27662087
    404684 5t9s:I (4.2) BS02 CA ? GO:0003151 ... P11716 27662087
    404685 5t9t:A (3.5) BS01 CA ? GO:0005509 ... Q8K486 27782885
    404686 5t9t:A (3.5) BS02 CA ? GO:0005509 ... Q8K486 27782885
    404687 5t9t:A (3.5) BS03 CA ? GO:0005509 ... Q8K486 27782885
    404688 5t9t:A (3.5) BS04 CA ? GO:0005509 ... Q8K486 27782885
    404689 5t9t:A (3.5) BS05 CA ? GO:0005509 ... Q8K486 27782885
    404690 5t9t:A (3.5) BS06 CA ? GO:0005509 ... Q8K486 27782885
    404691 5t9t:A (3.5) BS07 CA ? GO:0005509 ... Q8K486 27782885
    404692 5t9t:A (3.5) BS08 CA ? GO:0005509 ... Q8K486 27782885
    404693 5t9t:A (3.5) BS09 CA ? GO:0005509 ... Q8K486 27782885
    404694 5t9t:A (3.5) BS10 CA ? GO:0005509 ... Q8K486 27782885
    404695 5t9t:A (3.5) BS11 CA ? GO:0005509 ... Q8K486 27782885
    404696 5t9t:A (3.5) BS12 CA ? GO:0005509 ... Q8K486 27782885
    404697 5t9t:A (3.5) BS13 MAN ? GO:0005509 ... Q8K486 27782885
    404698 5t9t:A (3.5) BS14 MAN ? GO:0005509 ... Q8K486 27782885
    404699 5t9t:A (3.5) BS15 MAN ? GO:0005509 ... Q8K486 27782885
    404700 5t9t:A (3.5) BS16 MAN ? GO:0005509 ... Q8K486 27782885
    404701 5t9t:B (3.5) BS01 CA ? GO:0005509 ... Q8K486 27782885
    404702 5t9t:B (3.5) BS02 CA ? GO:0005509 ... Q8K486 27782885
    404703 5t9t:B (3.5) BS03 CA ? GO:0005509 ... Q8K486 27782885
    404704 5t9t:B (3.5) BS04 CA ? GO:0005509 ... Q8K486 27782885
    404705 5t9t:B (3.5) BS05 CA ? GO:0005509 ... Q8K486 27782885
    404706 5t9t:B (3.5) BS06 CA ? GO:0005509 ... Q8K486 27782885
    404707 5t9t:B (3.5) BS07 CA ? GO:0005509 ... Q8K486 27782885
    404708 5t9t:B (3.5) BS08 CA ? GO:0005509 ... Q8K486 27782885
    404709 5t9t:B (3.5) BS09 CA ? GO:0005509 ... Q8K486 27782885
    404710 5t9t:B (3.5) BS10 CA ? GO:0005509 ... Q8K486 27782885
    404711 5t9t:B (3.5) BS11 CA ? GO:0005509 ... Q8K486 27782885
    404712 5t9t:B (3.5) BS12 CA ? GO:0005509 ... Q8K486 27782885
    404713 5t9t:B (3.5) BS13 CA ? GO:0005509 ... Q8K486 27782885
    404714 5t9t:B (3.5) BS14 CA ? GO:0005509 ... Q8K486 27782885
    404715 5t9t:B (3.5) BS15 MAN ? GO:0005509 ... Q8K486 27782885
    404716 5t9t:B (3.5) BS16 MAN ? GO:0005509 ... Q8K486 27782885
    404717 5t9t:B (3.5) BS17 MAN ? GO:0005509 ... Q8K486 27782885
    404718 5t9u:A (2.301) BS01 7HG 5.2.1.8 GO:0000413 ... P62937 28075591 MOAD: Kd=25nM
    BindingDB: Kd=25nM, Ki=16nM
    404719 5t9u:B (2.301) BS01 7HG 5.2.1.8 GO:0000413 ... P62937 28075591 MOAD: Kd=25nM
    BindingDB: Kd=25nM, Ki=16nM
    404720 5t9u:B (2.301) BS02 7HG 5.2.1.8 GO:0000413 ... P62937 28075591 MOAD: Kd=25nM
    BindingDB: Kd=25nM, Ki=16nM
    404721 5t9u:C (2.301) BS01 7HG 5.2.1.8 GO:0000413 ... P62937 28075591 MOAD: Kd=25nM
    BindingDB: Kd=25nM, Ki=16nM
    404722 5t9u:D (2.301) BS01 7HG 5.2.1.8 GO:0000413 ... P62937 28075591 MOAD: Kd=25nM
    BindingDB: Kd=25nM, Ki=16nM
    404723 5t9v:B (4.4) BS01 ATP ? GO:0005216 ... P11716 27662087
    404724 5t9v:B (4.4) BS02 CFF ? GO:0005216 ... P11716 27662087
    404725 5t9v:B (4.4) BS03 ZN ? GO:0005216 ... P11716 27662087
    404726 5t9v:B (4.4) BS04 CA ? GO:0005216 ... P11716 27662087
    404727 5t9v:E (4.4) BS01 ATP ? GO:0005216 ... P11716 27662087
    404728 5t9v:E (4.4) BS02 CFF ? GO:0005216 ... P11716 27662087
    404729 5t9v:E (4.4) BS03 ZN ? GO:0005216 ... P11716 27662087
    404730 5t9v:E (4.4) BS04 CA ? GO:0005216 ... P11716 27662087
    404731 5t9v:G (4.4) BS01 ATP ? GO:0005216 ... P11716 27662087
    404732 5t9v:G (4.4) BS02 CFF ? GO:0005216 ... P11716 27662087
    404733 5t9v:G (4.4) BS03 ZN ? GO:0005216 ... P11716 27662087
    404734 5t9v:G (4.4) BS04 CA ? GO:0005216 ... P11716 27662087
    404735 5t9v:I (4.4) BS01 ATP ? GO:0005216 ... P11716 27662087
    404736 5t9v:I (4.4) BS02 CFF ? GO:0005216 ... P11716 27662087
    404737 5t9v:I (4.4) BS03 ZN ? GO:0005216 ... P11716 27662087
    404738 5t9v:I (4.4) BS04 CA ? GO:0005216 ... P11716 27662087
    404739 5t9w:A (2.0) BS01 78E 5.2.1.8 GO:0000413 ... P62937 28075591 MOAD: Kd=2600nM
    BindingDB: Kd=2600nM, Ki=795nM
    404740 5t9z:A (1.4) BS01 78R 5.2.1.8 GO:0000413 ... P62937 28075591 MOAD: Kd=64nM
    BindingDB: Kd=64nM, Ki=14nM
    404741 5ta0:A (1.4) BS01 GAL ? N/A A0A2D0TCD2 29535379
    404742 5ta0:A (1.4) BS02 AAL ? N/A A0A2D0TCD2 29535379
    404743 5ta0:A (1.4) BS03 AAL ? N/A A0A2D0TCD2 29535379
    404744 5ta0:A (1.4) BS04 GAL ? N/A A0A2D0TCD2 29535379
    404745 5ta0:A (1.4) BS05 CA ? N/A A0A2D0TCD2 29535379
    404746 5ta0:A (1.4) BS06 CA ? N/A A0A2D0TCD2 29535379
    404747 5ta0:B (1.4) BS01 CA ? N/A A0A2D0TCD2 29535379
    404748 5ta0:B (1.4) BS02 CA ? N/A A0A2D0TCD2 29535379
    404749 5ta1:A (2.3) BS01 CA ? GO:0046872 ... A0A2D0TCD3 29535379
    404750 5ta1:A (2.3) BS02 CA ? GO:0046872 ... A0A2D0TCD3 29535379
    404751 5ta2:A (1.48) BS01 78X 5.2.1.8 GO:0000413 ... P62937 28075591 MOAD: Kd=11nM
    BindingDB: Kd=11nM, Ki=4.0nM
    404752 5ta3:B (4.4) BS01 ATP ? GO:0005216 ... P11716 27662087
    404753 5ta3:B (4.4) BS02 CFF ? GO:0005216 ... P11716 27662087
    404754 5ta3:B (4.4) BS03 ZN ? GO:0005216 ... P11716 27662087
    404755 5ta3:B (4.4) BS04 CA ? GO:0005216 ... P11716 27662087
    404756 5ta3:E (4.4) BS01 ATP ? GO:0005216 ... P11716 27662087
    404757 5ta3:E (4.4) BS02 CFF ? GO:0005216 ... P11716 27662087
    404758 5ta3:E (4.4) BS03 ZN ? GO:0005216 ... P11716 27662087
    404759 5ta3:E (4.4) BS04 CA ? GO:0005216 ... P11716 27662087
    404760 5ta3:G (4.4) BS01 ATP ? GO:0005216 ... P11716 27662087
    404761 5ta3:G (4.4) BS02 CFF ? GO:0005216 ... P11716 27662087
    404762 5ta3:G (4.4) BS03 ZN ? GO:0005216 ... P11716 27662087
    404763 5ta3:G (4.4) BS04 CA ? GO:0005216 ... P11716 27662087
    404764 5ta3:I (4.4) BS01 ATP ? GO:0005216 ... P11716 27662087
    404765 5ta3:I (4.4) BS02 CFF ? GO:0005216 ... P11716 27662087
    404766 5ta3:I (4.4) BS03 ZN ? GO:0005216 ... P11716 27662087
    404767 5ta3:I (4.4) BS04 CA ? GO:0005216 ... P11716 27662087
    404768 5ta4:A (1.5) BS01 838 5.2.1.8 GO:0000413 ... P62937 28075591 MOAD: Kd=24nM
    BindingDB: Kd=24nM, Ki=7.0nM
    404769 5ta5:A (1.65) BS01 GAL ? GO:0046872 ... A0A2D0TCD3 29535379
    404770 5ta5:A (1.65) BS02 AAL ? GO:0046872 ... A0A2D0TCD3 29535379
    404771 5ta5:A (1.65) BS03 AAL ? GO:0046872 ... A0A2D0TCD3 29535379
    404772 5ta5:A (1.65) BS04 GAL ? GO:0046872 ... A0A2D0TCD3 29535379
    404773 5ta5:A (1.65) BS05 CA ? GO:0046872 ... A0A2D0TCD3 29535379
    404774 5ta5:A (1.65) BS06 CA ? GO:0046872 ... A0A2D0TCD3 29535379
    404775 5ta5:A (1.65) BS07 CA ? GO:0046872 ... A0A2D0TCD3 29535379
    404776 5ta5:B (1.65) BS01 CA ? GO:0046872 ... A0A2D0TCD3 29535379
    404777 5ta5:B (1.65) BS02 CA ? GO:0046872 ... A0A2D0TCD3 29535379
    404778 5ta5:B (1.65) BS03 CA ? GO:0046872 ... A0A2D0TCD3 29535379
    404779 5ta6:A (2.5) BS01 79D 2.7.11.21 GO:0004672 ... P53350 28169164 MOAD: ic50=1.5nM
    BindingDB: IC50=1.5nM
    404780 5ta6:A (2.5) BS02 ZN 2.7.11.21 GO:0004672 ... P53350 28169164
    404781 5ta8:A (2.6) BS01 ZN 2.7.11.21 GO:0004672 ... P53350 28169164
    404782 5ta8:A (2.6) BS02 79C 2.7.11.21 GO:0004672 ... P53350 28169164 BindingDB: IC50=4.0nM
    404783 5ta9:A (2.4) BS01 GAL ? GO:0004553 ... A0A2D0TCD6 29535379
    404784 5ta9:A (2.4) BS02 AAL ? GO:0004553 ... A0A2D0TCD6 29535379
    404785 5ta9:B (2.4) BS01 GAL ? GO:0004553 ... A0A2D0TCD6 29535379
    404786 5ta9:B (2.4) BS02 AAL ? GO:0004553 ... A0A2D0TCD6 29535379
    404787 5ta9:C (2.4) BS01 GAL ? GO:0004553 ... A0A2D0TCD6 29535379
    404788 5ta9:C (2.4) BS02 AAL ? GO:0004553 ... A0A2D0TCD6 29535379
    404789 5ta9:D (2.4) BS01 GAL ? GO:0004553 ... A0A2D0TCD6 29535379
    404790 5ta9:D (2.4) BS02 AAL ? GO:0004553 ... A0A2D0TCD6 29535379
    404791 5tab:A (1.25) BS01 ZN ? N/A Q9BVI0 27760318
    404792 5tab:A (1.25) BS02 ZN ? N/A Q9BVI0 27760318
    404793 5tac:A (2.04) BS01 CA 3.4.24.27 GO:0004222 ... P00800 N/A
    404794 5tac:A (2.04) BS02 CA 3.4.24.27 GO:0004222 ... P00800 N/A
    404795 5tac:A (2.04) BS03 CA 3.4.24.27 GO:0004222 ... P00800 N/A
    404796 5tac:A (2.04) BS04 CA 3.4.24.27 GO:0004222 ... P00800 N/A
    404797 5tac:A (2.04) BS05 ZN 3.4.24.27 GO:0004222 ... P00800 N/A
    404798 5tac:A (2.04) BS06 VAL 3.4.24.27 GO:0004222 ... P00800 N/A
    404799 5tac:A (2.04) BS07 LYS 3.4.24.27 GO:0004222 ... P00800 N/A
    404800 5tad:A (2.09) BS01 CA 3.4.24.27 GO:0004222 ... P00800 N/A

    Reference:
  • Chengxin Zhang, Xi Zhang, Lydia Freddolino, and Yang Zhang. BioLiP2: an updated structure database for biologically relevent ligand-protein interactions, Nucleic Acids Research, gkad630 (2023).
  • Jianyi Yang, Ambrish Roy, and Yang Zhang. BioLiP: a semi-manually curated database for biologically relevant ligand-protein interactions, Nucleic Acids Research, 41: D1096-D1103 (2013) (download the PDF file).