SEQ2FUN

BioLiP
Download all results in tab-seperated text for 942758 receptor-ligand interactions, whose format is explained at readme.txt.
  • Hover over PDB to view the title of the structure. Click PDB to view the structure at the RCSB PDB database. Resolution -1.00 means the resolution is unavailable, e.g., for NMR structures.
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  • Hover over Ligand to view the full ligand name. Click Ligand to view the 2D diagram and other detail information of the ligand.
  • Hover over EC number to view the full name of enzymatic activity.
  • Hover over GO terms to view all GO terms.
  • Hover over UniProt to view the protein name.
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    # PDB
    (Resolution Å)
    Site # Ligand EC number GO terms UniProt PubMed Binding
    affinity
    406001 5tga:S9 (3.3) BS01 rna ? GO:0000462 ... O13516 27827794
    406002 5tga:S9 (3.3) BS02 OHX ? GO:0000462 ... O13516 27827794
    406003 5tga:SM (3.3) BS01 rna ? N/A P39015 27827794
    406004 5tga:SM (3.3) BS02 rna ? N/A P39015 27827794
    406005 5tga:SM (3.3) BS03 OHX ? N/A P39015 27827794
    406006 5tga:SR (3.3) BS01 rna ? GO:0001965 ... P38011 27827794
    406007 5tga:SR (3.3) BS02 OHX ? GO:0001965 ... P38011 27827794
    406008 5tga:c0 (3.3) BS01 rna ? N/A Q08745 27827794
    406009 5tga:c1 (3.3) BS01 rna ? GO:0000028 ... P0CX47 27827794
    406010 5tga:c1 (3.3) BS02 MG ? GO:0000028 ... P0CX47 27827794
    406011 5tga:c2 (3.3) BS01 rna ? GO:0003735 ... P48589 27827794
    406012 5tga:c3 (3.3) BS01 rna ? GO:0000462 ... P05756 27827794
    406013 5tga:c3 (3.3) BS02 rna ? GO:0000462 ... P05756 27827794
    406014 5tga:c3 (3.3) BS03 OHX ? GO:0000462 ... P05756 27827794
    406015 5tga:c4 (3.3) BS01 rna ? GO:0000028 ... P39516 27827794
    406016 5tga:c5 (3.3) BS01 rna ? GO:0000028 ... Q01855 27827794
    406017 5tga:c5 (3.3) BS02 OHX ? GO:0000028 ... Q01855 27827794
    406018 5tga:c5 (3.3) BS03 OHX ? GO:0000028 ... Q01855 27827794
    406019 5tga:c6 (3.3) BS01 rna ? GO:0000462 ... P0CX51 27827794
    406020 5tga:c6 (3.3) BS02 MG ? GO:0000462 ... P0CX51 27827794
    406021 5tga:c7 (3.3) BS01 rna ? GO:0000028 ... P14127 27827794
    406022 5tga:c8 (3.3) BS01 rna ? GO:0000054 ... P0CX55 27827794
    406023 5tga:c8 (3.3) BS02 OHX ? GO:0000054 ... P0CX55 27827794
    406024 5tga:c8 (3.3) BS03 MG ? GO:0000054 ... P0CX55 27827794
    406025 5tga:c9 (3.3) BS01 rna ? GO:0000028 ... P07280 27827794
    406026 5tga:c9 (3.3) BS02 MG ? GO:0000028 ... P07280 27827794
    406027 5tga:d0 (3.3) BS01 rna ? GO:0000462 ... P38701 27827794
    406028 5tga:d2 (3.3) BS01 rna ? GO:0002181 ... P0C0W1 27827794
    406029 5tga:d3 (3.3) BS01 rna ? GO:0000462 ... P0CX29 27827794
    406030 5tga:d4 (3.3) BS01 rna ? GO:0000462 ... P0CX31 27827794
    406031 5tga:d5 (3.3) BS01 rna ? N/A Q3E792 27827794
    406032 5tga:d6 (3.3) BS01 rna ? GO:0003735 ... P39939 27827794
    406033 5tga:d6 (3.3) BS02 MG ? GO:0003735 ... P39939 27827794
    406034 5tga:d6 (3.3) BS03 ZN ? GO:0003735 ... P39939 27827794
    406035 5tga:d7 (3.3) BS01 rna ? GO:0000028 ... P35997 27827794
    406036 5tga:d8 (3.3) BS01 rna ? GO:0000028 ... Q3E7X9 27827794
    406037 5tga:d9 (3.3) BS01 rna ? GO:0002181 ... P41057 27827794
    406038 5tga:d9 (3.3) BS02 ZN ? GO:0002181 ... P41057 27827794
    406039 5tga:d9 (3.3) BS03 MG ? GO:0002181 ... P41057 27827794
    406040 5tga:e0 (3.3) BS01 rna ? GO:0002181 ... P0CX33 27827794
    406041 5tga:e1 (3.3) BS01 rna ? GO:0003735 ... P05759 27827794
    406042 5tga:l2 (3.3) BS01 rna ? GO:0002181 ... P0CX45 27827794
    406043 5tga:l2 (3.3) BS02 rna ? GO:0002181 ... P0CX45 27827794
    406044 5tga:l2 (3.3) BS03 MG ? GO:0002181 ... P0CX45 27827794
    406045 5tga:l2 (3.3) BS04 MG ? GO:0002181 ... P0CX45 27827794
    406046 5tga:l3 (3.3) BS01 rna ? GO:0000027 ... P14126 27827794
    406047 5tga:l3 (3.3) BS02 MG ? GO:0000027 ... P14126 27827794
    406048 5tga:l3 (3.3) BS03 MG ? GO:0000027 ... P14126 27827794
    406049 5tga:l3 (3.3) BS04 MG ? GO:0000027 ... P14126 27827794
    406050 5tga:l3 (3.3) BS05 OHX ? GO:0000027 ... P14126 27827794
    406051 5tga:l3 (3.3) BS06 OHX ? GO:0000027 ... P14126 27827794
    406052 5tga:l3 (3.3) BS07 MG ? GO:0000027 ... P14126 27827794
    406053 5tga:l3 (3.3) BS08 MG ? GO:0000027 ... P14126 27827794
    406054 5tga:l3 (3.3) BS09 MG ? GO:0000027 ... P14126 27827794
    406055 5tga:l3 (3.3) BS10 MG ? GO:0000027 ... P14126 27827794
    406056 5tga:l3 (3.3) BS11 MG ? GO:0000027 ... P14126 27827794
    406057 5tga:l3 (3.3) BS12 MG ? GO:0000027 ... P14126 27827794
    406058 5tga:l3 (3.3) BS13 MG ? GO:0000027 ... P14126 27827794
    406059 5tga:l4 (3.3) BS01 rna ? GO:0002181 ... P10664 27827794
    406060 5tga:l4 (3.3) BS02 rna ? GO:0002181 ... P10664 27827794
    406061 5tga:l4 (3.3) BS03 MG ? GO:0002181 ... P10664 27827794
    406062 5tga:l4 (3.3) BS04 OHX ? GO:0002181 ... P10664 27827794
    406063 5tga:l4 (3.3) BS05 OHX ? GO:0002181 ... P10664 27827794
    406064 5tga:l5 (3.3) BS01 rna ? GO:0000027 ... P26321 27827794
    406065 5tga:l5 (3.3) BS02 rna ? GO:0000027 ... P26321 27827794
    406066 5tga:l5 (3.3) BS03 MG ? GO:0000027 ... P26321 27827794
    406067 5tga:l5 (3.3) BS04 MG ? GO:0000027 ... P26321 27827794
    406068 5tga:l5 (3.3) BS05 MG ? GO:0000027 ... P26321 27827794
    406069 5tga:l5 (3.3) BS06 OHX ? GO:0000027 ... P26321 27827794
    406070 5tga:l5 (3.3) BS07 OHX ? GO:0000027 ... P26321 27827794
    406071 5tga:l5 (3.3) BS08 MG ? GO:0000027 ... P26321 27827794
    406072 5tga:l5 (3.3) BS09 MG ? GO:0000027 ... P26321 27827794
    406073 5tga:l5 (3.3) BS10 MG ? GO:0000027 ... P26321 27827794
    406074 5tga:l5 (3.3) BS11 MG ? GO:0000027 ... P26321 27827794
    406075 5tga:l6 (3.3) BS01 rna ? GO:0000027 ... Q02326 27827794
    406076 5tga:l7 (3.3) BS01 rna ? GO:0000463 ... P05737 27827794
    406077 5tga:l7 (3.3) BS02 rna ? GO:0000463 ... P05737 27827794
    406078 5tga:l7 (3.3) BS03 MG ? GO:0000463 ... P05737 27827794
    406079 5tga:l7 (3.3) BS04 MG ? GO:0000463 ... P05737 27827794
    406080 5tga:l8 (3.3) BS01 rna ? GO:0000470 ... P17076 27827794
    406081 5tga:l8 (3.3) BS02 rna ? GO:0000470 ... P17076 27827794
    406082 5tga:l9 (3.3) BS01 rna ? GO:0002181 ... P05738 27827794
    406083 5tga:l9 (3.3) BS02 MG ? GO:0002181 ... P05738 27827794
    406084 5tga:l9 (3.3) BS03 MG ? GO:0002181 ... P05738 27827794
    406085 5tga:m0 (3.3) BS01 rna ? GO:0000027 ... P41805 27827794
    406086 5tga:m0 (3.3) BS02 rna ? GO:0000027 ... P41805 27827794
    406087 5tga:m0 (3.3) BS03 OHX ? GO:0000027 ... P41805 27827794
    406088 5tga:m0 (3.3) BS04 OHX ? GO:0000027 ... P41805 27827794
    406089 5tga:m0 (3.3) BS05 OHX ? GO:0000027 ... P41805 27827794
    406090 5tga:m0 (3.3) BS06 OHX ? GO:0000027 ... P41805 27827794
    406091 5tga:m1 (3.3) BS01 rna ? GO:0000027 ... Q3E757 27827794
    406092 5tga:m1 (3.3) BS02 rna ? GO:0000027 ... Q3E757 27827794
    406093 5tga:m1 (3.3) BS03 OHX ? GO:0000027 ... Q3E757 27827794
    406094 5tga:m2 (3.3) BS01 rna N/A N/A N/A 27827794
    406095 5tga:m3 (3.3) BS01 rna ? GO:0002181 ... Q12690 27827794
    406096 5tga:m3 (3.3) BS02 rna ? GO:0002181 ... Q12690 27827794
    406097 5tga:m3 (3.3) BS03 MG ? GO:0002181 ... Q12690 27827794
    406098 5tga:m4 (3.3) BS01 rna ? GO:0000027 ... P36105 27827794
    406099 5tga:m4 (3.3) BS02 MG ? GO:0000027 ... P36105 27827794
    406100 5tga:m5 (3.3) BS01 rna ? GO:0002181 ... P05748 27827794
    406101 5tga:m5 (3.3) BS02 rna ? GO:0002181 ... P05748 27827794
    406102 5tga:m5 (3.3) BS03 MG ? GO:0002181 ... P05748 27827794
    406103 5tga:m6 (3.3) BS01 rna ? GO:0000470 ... P26784 27827794
    406104 5tga:m6 (3.3) BS02 MG ? GO:0000470 ... P26784 27827794
    406105 5tga:m6 (3.3) BS03 MG ? GO:0000470 ... P26784 27827794
    406106 5tga:m6 (3.3) BS04 MG ? GO:0000470 ... P26784 27827794
    406107 5tga:m6 (3.3) BS05 MG ? GO:0000470 ... P26784 27827794
    406108 5tga:m6 (3.3) BS06 MG ? GO:0000470 ... P26784 27827794
    406109 5tga:m6 (3.3) BS07 MG ? GO:0000470 ... P26784 27827794
    406110 5tga:m7 (3.3) BS01 rna ? GO:0000448 ... P05740 27827794
    406111 5tga:m7 (3.3) BS02 rna ? GO:0000448 ... P05740 27827794
    406112 5tga:m7 (3.3) BS03 OHX ? GO:0000448 ... P05740 27827794
    406113 5tga:m7 (3.3) BS04 MG ? GO:0000448 ... P05740 27827794
    406114 5tga:m7 (3.3) BS05 MG ? GO:0000448 ... P05740 27827794
    406115 5tga:m7 (3.3) BS06 MG ? GO:0000448 ... P05740 27827794
    406116 5tga:m7 (3.3) BS07 MG ? GO:0000448 ... P05740 27827794
    406117 5tga:m8 (3.3) BS01 rna ? GO:0002181 ... P0CX49 27827794
    406118 5tga:m8 (3.3) BS02 MG ? GO:0002181 ... P0CX49 27827794
    406119 5tga:m8 (3.3) BS03 MG ? GO:0002181 ... P0CX49 27827794
    406120 5tga:m9 (3.3) BS01 rna ? GO:0002181 ... P0CX82 27827794
    406121 5tga:m9 (3.3) BS02 rna ? GO:0002181 ... P0CX82 27827794
    406122 5tga:m9 (3.3) BS03 OHX ? GO:0002181 ... P0CX82 27827794
    406123 5tga:m9 (3.3) BS04 MG ? GO:0002181 ... P0CX82 27827794
    406124 5tga:m9 (3.3) BS05 OHX ? GO:0002181 ... P0CX82 27827794
    406125 5tga:m9 (3.3) BS06 MG ? GO:0002181 ... P0CX82 27827794
    406126 5tga:n0 (3.3) BS01 rna ? GO:0002181 ... P0CX23 27827794
    406127 5tga:n0 (3.3) BS02 rna ? GO:0002181 ... P0CX23 27827794
    406128 5tga:n0 (3.3) BS03 MG ? GO:0002181 ... P0CX23 27827794
    406129 5tga:n0 (3.3) BS04 MG ? GO:0002181 ... P0CX23 27827794
    406130 5tga:n1 (3.3) BS01 rna ? GO:0002181 ... Q02753 27827794
    406131 5tga:n1 (3.3) BS02 rna ? GO:0002181 ... Q02753 27827794
    406132 5tga:n1 (3.3) BS03 MG ? GO:0002181 ... Q02753 27827794
    406133 5tga:n1 (3.3) BS04 MG ? GO:0002181 ... Q02753 27827794
    406134 5tga:n1 (3.3) BS05 OHX ? GO:0002181 ... Q02753 27827794
    406135 5tga:n1 (3.3) BS06 MG ? GO:0002181 ... Q02753 27827794
    406136 5tga:n1 (3.3) BS07 MG ? GO:0002181 ... Q02753 27827794
    406137 5tga:n2 (3.3) BS01 rna ? GO:0003735 ... P05749 27827794
    406138 5tga:n3 (3.3) BS01 rna ? GO:0002181 ... P0CX41 27827794
    406139 5tga:n3 (3.3) BS02 rna ? GO:0002181 ... P0CX41 27827794
    406140 5tga:n3 (3.3) BS03 MG ? GO:0002181 ... P0CX41 27827794
    406141 5tga:n4 (3.3) BS01 rna ? GO:0003735 ... P04449 27827794
    406142 5tga:n4 (3.3) BS02 rna ? GO:0003735 ... P04449 27827794
    406143 5tga:n5 (3.3) BS01 rna ? GO:0003735 ... P04456 27827794
    406144 5tga:n5 (3.3) BS02 rna ? GO:0003735 ... P04456 27827794
    406145 5tga:n6 (3.3) BS01 rna ? GO:0002181 ... P05743 27827794
    406146 5tga:n6 (3.3) BS02 rna ? GO:0002181 ... P05743 27827794
    406147 5tga:n7 (3.3) BS01 rna ? GO:0002181 ... P0C2H6 27827794
    406148 5tga:n8 (3.3) BS01 rna ? GO:0002181 ... P02406 27827794
    406149 5tga:n8 (3.3) BS02 MG ? GO:0002181 ... P02406 27827794
    406150 5tga:n8 (3.3) BS03 MG ? GO:0002181 ... P02406 27827794
    406151 5tga:n8 (3.3) BS04 MG ? GO:0002181 ... P02406 27827794
    406152 5tga:n9 (3.3) BS01 rna ? GO:0002181 ... P05747 27827794
    406153 5tga:n9 (3.3) BS02 MG ? GO:0002181 ... P05747 27827794
    406154 5tga:n9 (3.3) BS03 OHX ? GO:0002181 ... P05747 27827794
    406155 5tga:n9 (3.3) BS04 MG ? GO:0002181 ... P05747 27827794
    406156 5tga:o0 (3.3) BS01 rna ? GO:0002181 ... P14120 27827794
    406157 5tga:o1 (3.3) BS01 rna ? GO:0002181 ... P0C2H8 27827794
    406158 5tga:o1 (3.3) BS02 MG ? GO:0002181 ... P0C2H8 27827794
    406159 5tga:o2 (3.3) BS01 rna ? GO:0002181 ... P38061 27827794
    406160 5tga:o2 (3.3) BS02 MG ? GO:0002181 ... P38061 27827794
    406161 5tga:o2 (3.3) BS03 MG ? GO:0002181 ... P38061 27827794
    406162 5tga:o2 (3.3) BS04 MG ? GO:0002181 ... P38061 27827794
    406163 5tga:o2 (3.3) BS05 MG ? GO:0002181 ... P38061 27827794
    406164 5tga:o3 (3.3) BS01 rna ? GO:0000027 ... P05744 27827794
    406165 5tga:o3 (3.3) BS02 MG ? GO:0000027 ... P05744 27827794
    406166 5tga:o3 (3.3) BS03 MG ? GO:0000027 ... P05744 27827794
    406167 5tga:o4 (3.3) BS01 rna ? GO:0002181 ... P87262 27827794
    406168 5tga:o4 (3.3) BS02 MG ? GO:0002181 ... P87262 27827794
    406169 5tga:o5 (3.3) BS01 rna ? GO:0000463 ... P0CX84 27827794
    406170 5tga:o5 (3.3) BS02 rna ? GO:0000463 ... P0CX84 27827794
    406171 5tga:o5 (3.3) BS03 MG ? GO:0000463 ... P0CX84 27827794
    406172 5tga:o6 (3.3) BS01 rna ? GO:0002181 ... P05745 27827794
    406173 5tga:o6 (3.3) BS02 MG ? GO:0002181 ... P05745 27827794
    406174 5tga:o7 (3.3) BS01 rna ? GO:0000448 ... P49166 27827794
    406175 5tga:o7 (3.3) BS02 rna ? GO:0000448 ... P49166 27827794
    406176 5tga:o7 (3.3) BS03 MG ? GO:0000448 ... P49166 27827794
    406177 5tga:o7 (3.3) BS04 OHX ? GO:0000448 ... P49166 27827794
    406178 5tga:o7 (3.3) BS05 ZN ? GO:0000448 ... P49166 27827794
    406179 5tga:o7 (3.3) BS06 OHX ? GO:0000448 ... P49166 27827794
    406180 5tga:o7 (3.3) BS07 MG ? GO:0000448 ... P49166 27827794
    406181 5tga:o8 (3.3) BS01 rna ? GO:0002181 ... P49167 27827794
    406182 5tga:o9 (3.3) BS01 rna ? GO:0002181 ... P04650 27827794
    406183 5tga:o9 (3.3) BS02 rna ? GO:0002181 ... P04650 27827794
    406184 5tga:p0 (3.3) BS01 rna ? N/A P05317 27827794
    406185 5tga:p0 (3.3) BS02 MG ? N/A P05317 27827794
    406186 5tga:q0 (3.3) BS01 rna ? GO:0003735 ... P0CH08 27827794
    406187 5tga:q0 (3.3) BS02 ZN ? GO:0003735 ... P0CH08 27827794
    406188 5tga:q2 (3.3) BS01 rna ? GO:0002181 ... P0CX27 27827794
    406189 5tga:q2 (3.3) BS02 ZN ? GO:0002181 ... P0CX27 27827794
    406190 5tga:q2 (3.3) BS03 OHX ? GO:0002181 ... P0CX27 27827794
    406191 5tga:q2 (3.3) BS04 MG ? GO:0002181 ... P0CX27 27827794
    406192 5tga:q3 (3.3) BS01 rna ? GO:0002181 ... P0CX25 27827794
    406193 5tga:q3 (3.3) BS02 rna ? GO:0002181 ... P0CX25 27827794
    406194 5tga:q3 (3.3) BS03 ZN ? GO:0002181 ... P0CX25 27827794
    406195 5tga:q3 (3.3) BS04 MG ? GO:0002181 ... P0CX25 27827794
    406196 5tga:s0 (3.3) BS01 rna ? GO:0003735 ... B3LI22 27827794
    406197 5tga:s1 (3.3) BS01 rna ? GO:0003735 ... B3RHV0 27827794
    406198 5tga:s1 (3.3) BS02 rna ? GO:0003735 ... B3RHV0 27827794
    406199 5tga:s1 (3.3) BS03 OHX ? GO:0003735 ... B3RHV0 27827794
    406200 5tga:s1 (3.3) BS04 OHX ? GO:0003735 ... B3RHV0 27827794

    Reference:
  • Chengxin Zhang, Xi Zhang, Lydia Freddolino, and Yang Zhang. BioLiP2: an updated structure database for biologically relevent ligand-protein interactions, Nucleic Acids Research, gkad630 (2023).
  • Jianyi Yang, Ambrish Roy, and Yang Zhang. BioLiP: a semi-manually curated database for biologically relevant ligand-protein interactions, Nucleic Acids Research, 41: D1096-D1103 (2013) (download the PDF file).