SEQ2FUN

BioLiP
Download all results in tab-seperated text for 942758 receptor-ligand interactions, whose format is explained at readme.txt.
  • Hover over PDB to view the title of the structure. Click PDB to view the structure at the RCSB PDB database. Resolution -1.00 means the resolution is unavailable, e.g., for NMR structures.
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  • Hover over Ligand to view the full ligand name. Click Ligand to view the 2D diagram and other detail information of the ligand.
  • Hover over EC number to view the full name of enzymatic activity.
  • Hover over GO terms to view all GO terms.
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    # PDB
    (Resolution Å)
    Site # Ligand EC number GO terms UniProt PubMed Binding
    affinity
    406201 5tga:s2 (3.3) BS01 rna ? GO:0003723 ... P25443 27827794
    406202 5tga:s3 (3.3) BS01 rna ? GO:0000054 ... P05750 27827794
    406203 5tga:s4 (3.3) BS01 rna ? GO:0002181 ... P0CX35 27827794
    406204 5tga:s5 (3.3) BS01 rna ? GO:0000028 ... P26783 27827794
    406205 5tga:s5 (3.3) BS02 MG ? GO:0000028 ... P26783 27827794
    406206 5tga:s6 (3.3) BS01 rna ? GO:0000462 ... P0CX37 27827794
    406207 5tga:s7 (3.3) BS01 rna ? GO:0002181 ... P26786 27827794
    406208 5tga:s8 (3.3) BS01 rna ? GO:0000462 ... P0CX39 27827794
    406209 5tga:s8 (3.3) BS02 rna ? GO:0000462 ... P0CX39 27827794
    406210 5tga:s8 (3.3) BS03 OHX ? GO:0000462 ... P0CX39 27827794
    406211 5tga:s9 (3.3) BS01 rna ? GO:0000462 ... O13516 27827794
    406212 5tga:s9 (3.3) BS02 OHX ? GO:0000462 ... O13516 27827794
    406213 5tga:sM (3.3) BS01 rna ? N/A P39015 27827794
    406214 5tga:sM (3.3) BS02 rna ? N/A P39015 27827794
    406215 5tga:sR (3.3) BS01 rna ? GO:0001965 ... P38011 27827794
    406216 5tga:sR (3.3) BS02 OHX ? GO:0001965 ... P38011 27827794
    406217 5tgc:A (3.245) BS01 ATP ? GO:0000785 ... Q12406 29809203
    406218 5tgc:D (3.245) BS01 ATP ? GO:0000785 ... Q12406 29809203
    406219 5tgd:A (1.7) BS01 NAP N/A N/A N/A 34981773
    406220 5tgd:B (1.7) BS01 NAP N/A N/A N/A 34981773
    406221 5tgd:C (1.7) BS01 NAP N/A N/A N/A 34981773
    406222 5tgd:D (1.7) BS01 NAP N/A N/A N/A 34981773
    406223 5tgf:D (1.81) BS01 CA ? GO:0046872 ... B6VTD5 N/A
    406224 5tgh:A (2.8) BS01 peptide ? GO:0035091 ... Q9Y5X3 28226239
    406225 5tgh:C (2.8) BS01 peptide ? GO:0035091 ... Q9Y5X3 28226239
    406226 5tgh:E (2.8) BS01 peptide ? GO:0035091 ... Q9Y5X3 28226239
    406227 5tgh:E (2.8) BS02 peptide ? GO:0035091 ... Q9Y5X3 28226239
    406228 5tgh:G (2.8) BS01 peptide ? GO:0035091 ... Q9Y5X3 28226239
    406229 5tgi:A (1.98) BS01 peptide ? GO:0035091 ... Q9Y5X3 N/A
    406230 5tgi:B (1.98) BS01 peptide ? GO:0035091 ... Q9Y5X3 N/A
    406231 5tgj:A (2.6) BS01 peptide ? GO:0035091 ... Q9Y5X3 N/A
    406232 5tgj:A (2.6) BS02 peptide ? GO:0035091 ... Q9Y5X3 N/A
    406233 5tgj:C (2.6) BS01 peptide ? GO:0035091 ... Q9Y5X3 N/A
    406234 5tgj:C (2.6) BS02 peptide ? GO:0035091 ... Q9Y5X3 N/A
    406235 5tgk:A (1.912) BS01 MG 5.6.1.6 GO:0005524 ... P13569 29903914
    406236 5tgk:A (1.912) BS02 DTP 5.6.1.6 GO:0005524 ... P13569 29903914
    406237 5tgm:C0 (3.5) BS01 rna ? N/A Q08745 27827794
    406238 5tgm:C1 (3.5) BS01 rna ? GO:0000028 ... P0CX47 27827794
    406239 5tgm:C2 (3.5) BS01 rna ? GO:0003735 ... P48589 27827794
    406240 5tgm:C3 (3.5) BS01 rna ? GO:0000462 ... P05756 27827794
    406241 5tgm:C3 (3.5) BS02 rna ? GO:0000462 ... P05756 27827794
    406242 5tgm:C3 (3.5) BS03 OHX ? GO:0000462 ... P05756 27827794
    406243 5tgm:C3 (3.5) BS04 OHX ? GO:0000462 ... P05756 27827794
    406244 5tgm:C4 (3.5) BS01 rna ? GO:0003735 ... P06367 27827794
    406245 5tgm:C5 (3.5) BS01 rna ? GO:0003723 ... Q01855 27827794
    406246 5tgm:C5 (3.5) BS02 rna ? GO:0003723 ... Q01855 27827794
    406247 5tgm:C5 (3.5) BS03 OHX ? GO:0003723 ... Q01855 27827794
    406248 5tgm:C6 (3.5) BS01 rna ? GO:0000462 ... P0CX51 27827794
    406249 5tgm:C7 (3.5) BS01 rna ? GO:0003735 ... A0A0J9X224 27827794
    406250 5tgm:C8 (3.5) BS01 rna ? GO:0000054 ... P0CX55 27827794
    406251 5tgm:C8 (3.5) BS02 MG ? GO:0000054 ... P0CX55 27827794
    406252 5tgm:C9 (3.5) BS01 rna ? GO:0000028 ... P07280 27827794
    406253 5tgm:D0 (3.5) BS01 rna ? GO:0000462 ... P38701 27827794
    406254 5tgm:D2 (3.5) BS01 rna ? GO:0002181 ... P0C0W1 27827794
    406255 5tgm:D3 (3.5) BS01 rna ? GO:0000462 ... P0CY39 27827794
    406256 5tgm:D4 (3.5) BS01 rna ? GO:0000462 ... P0CX31 27827794
    406257 5tgm:D5 (3.5) BS01 rna ? N/A Q3E792 27827794
    406258 5tgm:D6 (3.5) BS01 rna ? GO:0003735 ... P39939 27827794
    406259 5tgm:D6 (3.5) BS02 ZN ? GO:0003735 ... P39939 27827794
    406260 5tgm:D7 (3.5) BS01 rna ? GO:0000028 ... P35997 27827794
    406261 5tgm:D8 (3.5) BS01 rna ? GO:0000028 ... Q3E7X9 27827794
    406262 5tgm:D9 (3.5) BS01 rna ? GO:0002181 ... P41057 27827794
    406263 5tgm:D9 (3.5) BS02 ZN ? GO:0002181 ... P41057 27827794
    406264 5tgm:D9 (3.5) BS03 OHX ? GO:0002181 ... P41057 27827794
    406265 5tgm:D9 (3.5) BS04 MG ? GO:0002181 ... P41057 27827794
    406266 5tgm:E0 (3.5) BS01 rna ? GO:0002181 ... P0CX33 27827794
    406267 5tgm:E1 (3.5) BS01 rna ? GO:0003735 ... P05759 27827794
    406268 5tgm:E1 (3.5) BS02 ZN ? GO:0003735 ... P05759 27827794
    406269 5tgm:L2 (3.5) BS01 rna ? GO:0002181 ... P0CX45 27827794
    406270 5tgm:L2 (3.5) BS02 rna ? GO:0002181 ... P0CX45 27827794
    406271 5tgm:L2 (3.5) BS03 MG ? GO:0002181 ... P0CX45 27827794
    406272 5tgm:L3 (3.5) BS01 rna ? GO:0000027 ... P14126 27827794
    406273 5tgm:L3 (3.5) BS02 OHX ? GO:0000027 ... P14126 27827794
    406274 5tgm:L3 (3.5) BS03 OHX ? GO:0000027 ... P14126 27827794
    406275 5tgm:L4 (3.5) BS01 rna ? GO:0002181 ... P10664 27827794
    406276 5tgm:L4 (3.5) BS02 rna ? GO:0002181 ... P10664 27827794
    406277 5tgm:L4 (3.5) BS03 OHX ? GO:0002181 ... P10664 27827794
    406278 5tgm:L4 (3.5) BS04 MG ? GO:0002181 ... P10664 27827794
    406279 5tgm:L4 (3.5) BS05 MG ? GO:0002181 ... P10664 27827794
    406280 5tgm:L5 (3.5) BS01 rna ? GO:0000027 ... P26321 27827794
    406281 5tgm:L5 (3.5) BS02 rna ? GO:0000027 ... P26321 27827794
    406282 5tgm:L6 (3.5) BS01 rna ? GO:0000027 ... Q02326 27827794
    406283 5tgm:L7 (3.5) BS01 rna ? GO:0000463 ... P05737 27827794
    406284 5tgm:L7 (3.5) BS02 rna ? GO:0000463 ... P05737 27827794
    406285 5tgm:L7 (3.5) BS03 OHX ? GO:0000463 ... P05737 27827794
    406286 5tgm:L8 (3.5) BS01 rna ? GO:0000470 ... P17076 27827794
    406287 5tgm:L8 (3.5) BS02 rna ? GO:0000470 ... P17076 27827794
    406288 5tgm:L9 (3.5) BS01 rna ? GO:0002181 ... P05738 27827794
    406289 5tgm:M0 (3.5) BS01 rna ? GO:0000027 ... P41805 27827794
    406290 5tgm:M0 (3.5) BS02 rna ? GO:0000027 ... P41805 27827794
    406291 5tgm:M0 (3.5) BS03 OHX ? GO:0000027 ... P41805 27827794
    406292 5tgm:M1 (3.5) BS01 rna ? GO:0000027 ... Q3E757 27827794
    406293 5tgm:M1 (3.5) BS02 rna ? GO:0000027 ... Q3E757 27827794
    406294 5tgm:M3 (3.5) BS01 rna ? GO:0002181 ... Q12690 27827794
    406295 5tgm:M3 (3.5) BS02 rna ? GO:0002181 ... Q12690 27827794
    406296 5tgm:M3 (3.5) BS03 MG ? GO:0002181 ... Q12690 27827794
    406297 5tgm:M4 (3.5) BS01 rna ? GO:0000027 ... P36105 27827794
    406298 5tgm:M5 (3.5) BS01 rna ? GO:0002181 ... P05748 27827794
    406299 5tgm:M5 (3.5) BS02 rna ? GO:0002181 ... P05748 27827794
    406300 5tgm:M5 (3.5) BS03 OHX ? GO:0002181 ... P05748 27827794
    406301 5tgm:M6 (3.5) BS01 rna ? GO:0000470 ... P26784 27827794
    406302 5tgm:M7 (3.5) BS01 rna ? GO:0000448 ... P05740 27827794
    406303 5tgm:M7 (3.5) BS02 rna ? GO:0000448 ... P05740 27827794
    406304 5tgm:M7 (3.5) BS03 MG ? GO:0000448 ... P05740 27827794
    406305 5tgm:M7 (3.5) BS04 MG ? GO:0000448 ... P05740 27827794
    406306 5tgm:M8 (3.5) BS01 rna ? GO:0002181 ... P0CX49 27827794
    406307 5tgm:M9 (3.5) BS01 rna ? GO:0002181 ... P0CX82 27827794
    406308 5tgm:M9 (3.5) BS02 rna ? GO:0002181 ... P0CX82 27827794
    406309 5tgm:M9 (3.5) BS03 OHX ? GO:0002181 ... P0CX82 27827794
    406310 5tgm:N0 (3.5) BS01 rna ? GO:0002181 ... P0CX23 27827794
    406311 5tgm:N0 (3.5) BS02 rna ? GO:0002181 ... P0CX23 27827794
    406312 5tgm:N1 (3.5) BS01 rna ? GO:0002181 ... Q02753 27827794
    406313 5tgm:N1 (3.5) BS02 rna ? GO:0002181 ... Q02753 27827794
    406314 5tgm:N2 (3.5) BS01 rna ? GO:0003735 ... P05749 27827794
    406315 5tgm:N3 (3.5) BS01 rna ? GO:0002181 ... P0CX41 27827794
    406316 5tgm:N3 (3.5) BS02 rna ? GO:0002181 ... P0CX41 27827794
    406317 5tgm:N3 (3.5) BS03 MG ? GO:0002181 ... P0CX41 27827794
    406318 5tgm:N3 (3.5) BS04 MG ? GO:0002181 ... P0CX41 27827794
    406319 5tgm:N4 (3.5) BS01 rna ? GO:0003735 ... P04449 27827794
    406320 5tgm:N4 (3.5) BS02 rna ? GO:0003735 ... P04449 27827794
    406321 5tgm:N5 (3.5) BS01 rna ? GO:0003735 ... P04456 27827794
    406322 5tgm:N5 (3.5) BS02 rna ? GO:0003735 ... P04456 27827794
    406323 5tgm:N5 (3.5) BS03 MG ? GO:0003735 ... P04456 27827794
    406324 5tgm:N6 (3.5) BS01 rna ? GO:0002181 ... P05743 27827794
    406325 5tgm:N6 (3.5) BS02 rna ? GO:0002181 ... P05743 27827794
    406326 5tgm:N6 (3.5) BS03 MG ? GO:0002181 ... P05743 27827794
    406327 5tgm:N7 (3.5) BS01 rna ? GO:0002181 ... P0C2H6 27827794
    406328 5tgm:N8 (3.5) BS01 rna ? GO:0002181 ... P02406 27827794
    406329 5tgm:N8 (3.5) BS02 MG ? GO:0002181 ... P02406 27827794
    406330 5tgm:N9 (3.5) BS01 rna ? GO:0002181 ... P05747 27827794
    406331 5tgm:N9 (3.5) BS02 OHX ? GO:0002181 ... P05747 27827794
    406332 5tgm:O0 (3.5) BS01 rna ? GO:0002181 ... P14120 27827794
    406333 5tgm:O1 (3.5) BS01 rna ? GO:0002181 ... P0C2H8 27827794
    406334 5tgm:O2 (3.5) BS01 rna ? GO:0002181 ... P38061 27827794
    406335 5tgm:O3 (3.5) BS01 rna ? GO:0000027 ... P05744 27827794
    406336 5tgm:O3 (3.5) BS02 OHX ? GO:0000027 ... P05744 27827794
    406337 5tgm:O4 (3.5) BS01 rna ? GO:0002181 ... P87262 27827794
    406338 5tgm:O5 (3.5) BS01 rna ? GO:0000463 ... P0CX84 27827794
    406339 5tgm:O5 (3.5) BS02 rna ? GO:0000463 ... P0CX84 27827794
    406340 5tgm:O5 (3.5) BS03 MG ? GO:0000463 ... P0CX84 27827794
    406341 5tgm:O6 (3.5) BS01 rna ? GO:0002181 ... P05745 27827794
    406342 5tgm:O7 (3.5) BS01 rna ? GO:0000448 ... P49166 27827794
    406343 5tgm:O7 (3.5) BS02 rna ? GO:0000448 ... P49166 27827794
    406344 5tgm:O7 (3.5) BS03 OHX ? GO:0000448 ... P49166 27827794
    406345 5tgm:O7 (3.5) BS04 OHX ? GO:0000448 ... P49166 27827794
    406346 5tgm:O7 (3.5) BS05 ZN ? GO:0000448 ... P49166 27827794
    406347 5tgm:O7 (3.5) BS06 OHX ? GO:0000448 ... P49166 27827794
    406348 5tgm:O8 (3.5) BS01 rna ? GO:0002181 ... P49167 27827794
    406349 5tgm:O9 (3.5) BS01 rna ? GO:0002181 ... P04650 27827794
    406350 5tgm:O9 (3.5) BS02 rna ? GO:0002181 ... P04650 27827794
    406351 5tgm:O9 (3.5) BS03 OHX ? GO:0002181 ... P04650 27827794
    406352 5tgm:Q0 (3.5) BS01 rna ? GO:0003735 ... P0CH08 27827794
    406353 5tgm:Q0 (3.5) BS02 ZN ? GO:0003735 ... P0CH08 27827794
    406354 5tgm:Q2 (3.5) BS01 rna ? GO:0002181 ... P0CX27 27827794
    406355 5tgm:Q2 (3.5) BS02 ZN ? GO:0002181 ... P0CX27 27827794
    406356 5tgm:Q2 (3.5) BS03 OHX ? GO:0002181 ... P0CX27 27827794
    406357 5tgm:Q3 (3.5) BS01 rna ? GO:0002181 ... P0CX25 27827794
    406358 5tgm:Q3 (3.5) BS02 ZN ? GO:0002181 ... P0CX25 27827794
    406359 5tgm:S0 (3.5) BS01 rna ? GO:0003735 ... P32905 27827794
    406360 5tgm:S1 (3.5) BS01 rna ? GO:0003735 ... P33442 27827794
    406361 5tgm:S2 (3.5) BS01 rna ? GO:0003723 ... P25443 27827794
    406362 5tgm:S3 (3.5) BS01 rna ? GO:0000054 ... P05750 27827794
    406363 5tgm:S4 (3.5) BS01 rna ? GO:0002181 ... P0CX35 27827794
    406364 5tgm:S4 (3.5) BS02 MG ? GO:0002181 ... P0CX35 27827794
    406365 5tgm:S5 (3.5) BS01 rna ? GO:0000028 ... P26783 27827794
    406366 5tgm:S6 (3.5) BS01 rna ? GO:0000462 ... P0CX37 27827794
    406367 5tgm:S7 (3.5) BS01 rna ? GO:0002181 ... P26786 27827794
    406368 5tgm:S8 (3.5) BS01 rna ? GO:0003735 ... A0A0J9X221 27827794
    406369 5tgm:S8 (3.5) BS02 rna ? GO:0003735 ... A0A0J9X221 27827794
    406370 5tgm:S8 (3.5) BS03 OHX ? GO:0003735 ... A0A0J9X221 27827794
    406371 5tgm:S9 (3.5) BS01 rna ? GO:0000462 ... O13516 27827794
    406372 5tgm:S9 (3.5) BS02 OHX ? GO:0000462 ... O13516 27827794
    406373 5tgm:SM (3.5) BS01 rna ? N/A P39015 27827794
    406374 5tgm:SM (3.5) BS02 rna ? N/A P39015 27827794
    406375 5tgm:SR (3.5) BS01 rna ? GO:0001965 ... P38011 27827794
    406376 5tgm:c0 (3.5) BS01 rna ? N/A Q08745 27827794
    406377 5tgm:c1 (3.5) BS01 rna ? GO:0000028 ... P0CX47 27827794
    406378 5tgm:c2 (3.5) BS01 rna ? GO:0003735 ... P48589 27827794
    406379 5tgm:c3 (3.5) BS01 rna ? GO:0000462 ... P05756 27827794
    406380 5tgm:c3 (3.5) BS02 rna ? GO:0000462 ... P05756 27827794
    406381 5tgm:c3 (3.5) BS03 OHX ? GO:0000462 ... P05756 27827794
    406382 5tgm:c4 (3.5) BS01 rna ? GO:0003735 ... P06367 27827794
    406383 5tgm:c5 (3.5) BS01 rna ? GO:0003723 ... Q01855 27827794
    406384 5tgm:c5 (3.5) BS02 OHX ? GO:0003723 ... Q01855 27827794
    406385 5tgm:c6 (3.5) BS01 rna ? GO:0000462 ... P0CX51 27827794
    406386 5tgm:c6 (3.5) BS02 MG ? GO:0000462 ... P0CX51 27827794
    406387 5tgm:c7 (3.5) BS01 rna ? GO:0003735 ... A0A0J9X224 27827794
    406388 5tgm:c8 (3.5) BS01 rna ? GO:0000054 ... P0CX55 27827794
    406389 5tgm:c8 (3.5) BS02 OHX ? GO:0000054 ... P0CX55 27827794
    406390 5tgm:c8 (3.5) BS03 MG ? GO:0000054 ... P0CX55 27827794
    406391 5tgm:c9 (3.5) BS01 rna ? GO:0000028 ... P07280 27827794
    406392 5tgm:c9 (3.5) BS02 MG ? GO:0000028 ... P07280 27827794
    406393 5tgm:d0 (3.5) BS01 rna ? GO:0000462 ... P38701 27827794
    406394 5tgm:d2 (3.5) BS01 rna ? GO:0002181 ... P0C0W1 27827794
    406395 5tgm:d3 (3.5) BS01 rna ? GO:0000462 ... P0CY39 27827794
    406396 5tgm:d4 (3.5) BS01 rna ? GO:0000462 ... P0CX31 27827794
    406397 5tgm:d5 (3.5) BS01 rna ? N/A Q3E792 27827794
    406398 5tgm:d6 (3.5) BS01 rna ? GO:0003735 ... P39939 27827794
    406399 5tgm:d6 (3.5) BS02 ZN ? GO:0003735 ... P39939 27827794
    406400 5tgm:d7 (3.5) BS01 rna ? GO:0000028 ... P35997 27827794

    Reference:
  • Chengxin Zhang, Xi Zhang, Lydia Freddolino, and Yang Zhang. BioLiP2: an updated structure database for biologically relevent ligand-protein interactions, Nucleic Acids Research, gkad630 (2023).
  • Jianyi Yang, Ambrish Roy, and Yang Zhang. BioLiP: a semi-manually curated database for biologically relevant ligand-protein interactions, Nucleic Acids Research, 41: D1096-D1103 (2013) (download the PDF file).