SEQ2FUN

BioLiP
Download all results in tab-seperated text for 942758 receptor-ligand interactions, whose format is explained at readme.txt.
  • Hover over PDB to view the title of the structure. Click PDB to view the structure at the RCSB PDB database. Resolution -1.00 means the resolution is unavailable, e.g., for NMR structures.
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  • Hover over Ligand to view the full ligand name. Click Ligand to view the 2D diagram and other detail information of the ligand.
  • Hover over EC number to view the full name of enzymatic activity.
  • Hover over GO terms to view all GO terms.
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    # PDB
    (Resolution Å)
    Site # Ligand EC number GO terms UniProt PubMed Binding
    affinity
    406401 5tgm:d7 (3.5) BS02 ZN ? GO:0000028 ... P35997 27827794
    406402 5tgm:d8 (3.5) BS01 rna ? GO:0000028 ... Q3E7X9 27827794
    406403 5tgm:d9 (3.5) BS01 rna ? GO:0002181 ... P41057 27827794
    406404 5tgm:d9 (3.5) BS02 ZN ? GO:0002181 ... P41057 27827794
    406405 5tgm:e0 (3.5) BS01 rna ? GO:0002181 ... P0CX33 27827794
    406406 5tgm:e1 (3.5) BS01 rna ? GO:0003735 ... P05759 27827794
    406407 5tgm:l2 (3.5) BS01 rna ? GO:0002181 ... P0CX45 27827794
    406408 5tgm:l2 (3.5) BS02 rna ? GO:0002181 ... P0CX45 27827794
    406409 5tgm:l2 (3.5) BS03 MG ? GO:0002181 ... P0CX45 27827794
    406410 5tgm:l3 (3.5) BS01 rna ? GO:0000027 ... P14126 27827794
    406411 5tgm:l3 (3.5) BS02 OHX ? GO:0000027 ... P14126 27827794
    406412 5tgm:l3 (3.5) BS03 OHX ? GO:0000027 ... P14126 27827794
    406413 5tgm:l3 (3.5) BS04 OHX ? GO:0000027 ... P14126 27827794
    406414 5tgm:l3 (3.5) BS05 MG ? GO:0000027 ... P14126 27827794
    406415 5tgm:l4 (3.5) BS01 rna ? GO:0002181 ... P10664 27827794
    406416 5tgm:l4 (3.5) BS02 rna ? GO:0002181 ... P10664 27827794
    406417 5tgm:l5 (3.5) BS01 rna ? GO:0000027 ... P26321 27827794
    406418 5tgm:l5 (3.5) BS02 rna ? GO:0000027 ... P26321 27827794
    406419 5tgm:l5 (3.5) BS03 OHX ? GO:0000027 ... P26321 27827794
    406420 5tgm:l5 (3.5) BS04 OHX ? GO:0000027 ... P26321 27827794
    406421 5tgm:l5 (3.5) BS05 MG ? GO:0000027 ... P26321 27827794
    406422 5tgm:l6 (3.5) BS01 rna ? GO:0000027 ... Q02326 27827794
    406423 5tgm:l7 (3.5) BS01 rna ? GO:0000463 ... P05737 27827794
    406424 5tgm:l7 (3.5) BS02 rna ? GO:0000463 ... P05737 27827794
    406425 5tgm:l7 (3.5) BS03 MG ? GO:0000463 ... P05737 27827794
    406426 5tgm:l8 (3.5) BS01 rna ? GO:0003723 ... P17076 27827794
    406427 5tgm:l8 (3.5) BS02 rna ? GO:0003723 ... P17076 27827794
    406428 5tgm:l9 (3.5) BS01 rna ? GO:0002181 ... P05738 27827794
    406429 5tgm:l9 (3.5) BS02 OHX ? GO:0002181 ... P05738 27827794
    406430 5tgm:m0 (3.5) BS01 rna ? GO:0000027 ... P41805 27827794
    406431 5tgm:m0 (3.5) BS02 rna ? GO:0000027 ... P41805 27827794
    406432 5tgm:m0 (3.5) BS03 OHX ? GO:0000027 ... P41805 27827794
    406433 5tgm:m0 (3.5) BS04 OHX ? GO:0000027 ... P41805 27827794
    406434 5tgm:m1 (3.5) BS01 rna ? GO:0000027 ... Q3E757 27827794
    406435 5tgm:m1 (3.5) BS02 rna ? GO:0000027 ... Q3E757 27827794
    406436 5tgm:m2 (3.5) BS01 rna ? GO:0003735 ... N/A 27827794
    406437 5tgm:m3 (3.5) BS01 rna ? GO:0002181 ... Q12690 27827794
    406438 5tgm:m3 (3.5) BS02 rna ? GO:0002181 ... Q12690 27827794
    406439 5tgm:m4 (3.5) BS01 rna ? GO:0000027 ... P36105 27827794
    406440 5tgm:m5 (3.5) BS01 rna ? GO:0002181 ... P05748 27827794
    406441 5tgm:m5 (3.5) BS02 rna ? GO:0002181 ... P05748 27827794
    406442 5tgm:m5 (3.5) BS03 OHX ? GO:0002181 ... P05748 27827794
    406443 5tgm:m5 (3.5) BS04 MG ? GO:0002181 ... P05748 27827794
    406444 5tgm:m6 (3.5) BS01 rna ? GO:0000470 ... P26784 27827794
    406445 5tgm:m6 (3.5) BS02 MG ? GO:0000470 ... P26784 27827794
    406446 5tgm:m6 (3.5) BS03 MG ? GO:0000470 ... P26784 27827794
    406447 5tgm:m6 (3.5) BS04 MG ? GO:0000470 ... P26784 27827794
    406448 5tgm:m7 (3.5) BS01 rna ? GO:0000448 ... P05740 27827794
    406449 5tgm:m7 (3.5) BS02 rna ? GO:0000448 ... P05740 27827794
    406450 5tgm:m7 (3.5) BS03 MG ? GO:0000448 ... P05740 27827794
    406451 5tgm:m8 (3.5) BS01 rna ? GO:0002181 ... P0CX49 27827794
    406452 5tgm:m8 (3.5) BS02 OHX ? GO:0002181 ... P0CX49 27827794
    406453 5tgm:m9 (3.5) BS01 rna ? GO:0002181 ... P0CX82 27827794
    406454 5tgm:m9 (3.5) BS02 rna ? GO:0002181 ... P0CX82 27827794
    406455 5tgm:n0 (3.5) BS01 rna ? GO:0002181 ... P0CX23 27827794
    406456 5tgm:n0 (3.5) BS02 rna ? GO:0002181 ... P0CX23 27827794
    406457 5tgm:n0 (3.5) BS03 MG ? GO:0002181 ... P0CX23 27827794
    406458 5tgm:n1 (3.5) BS01 rna ? GO:0002181 ... Q02753 27827794
    406459 5tgm:n1 (3.5) BS02 rna ? GO:0002181 ... Q02753 27827794
    406460 5tgm:n1 (3.5) BS03 OHX ? GO:0002181 ... Q02753 27827794
    406461 5tgm:n2 (3.5) BS01 rna ? GO:0003735 ... P05749 27827794
    406462 5tgm:n3 (3.5) BS01 rna ? GO:0002181 ... P0CX41 27827794
    406463 5tgm:n3 (3.5) BS02 rna ? GO:0002181 ... P0CX41 27827794
    406464 5tgm:n3 (3.5) BS03 OHX ? GO:0002181 ... P0CX41 27827794
    406465 5tgm:n4 (3.5) BS01 rna ? GO:0003735 ... P04449 27827794
    406466 5tgm:n4 (3.5) BS02 rna ? GO:0003735 ... P04449 27827794
    406467 5tgm:n5 (3.5) BS01 rna ? GO:0003735 ... P04456 27827794
    406468 5tgm:n5 (3.5) BS02 rna ? GO:0003735 ... P04456 27827794
    406469 5tgm:n6 (3.5) BS01 rna ? GO:0002181 ... P05743 27827794
    406470 5tgm:n6 (3.5) BS02 rna ? GO:0002181 ... P05743 27827794
    406471 5tgm:n7 (3.5) BS01 rna ? GO:0002181 ... P0C2H6 27827794
    406472 5tgm:n7 (3.5) BS02 OHX ? GO:0002181 ... P0C2H6 27827794
    406473 5tgm:n8 (3.5) BS01 rna ? GO:0002181 ... P02406 27827794
    406474 5tgm:n8 (3.5) BS02 OHX ? GO:0002181 ... P02406 27827794
    406475 5tgm:n8 (3.5) BS03 MG ? GO:0002181 ... P02406 27827794
    406476 5tgm:n9 (3.5) BS01 rna ? GO:0002181 ... P05747 27827794
    406477 5tgm:n9 (3.5) BS02 OHX ? GO:0002181 ... P05747 27827794
    406478 5tgm:o0 (3.5) BS01 rna ? GO:0002181 ... P14120 27827794
    406479 5tgm:o1 (3.5) BS01 rna ? GO:0002181 ... P0C2H8 27827794
    406480 5tgm:o2 (3.5) BS01 rna ? GO:0002181 ... P38061 27827794
    406481 5tgm:o3 (3.5) BS01 rna ? GO:0000027 ... P05744 27827794
    406482 5tgm:o3 (3.5) BS02 OHX ? GO:0000027 ... P05744 27827794
    406483 5tgm:o3 (3.5) BS03 MG ? GO:0000027 ... P05744 27827794
    406484 5tgm:o4 (3.5) BS01 rna ? GO:0002181 ... P87262 27827794
    406485 5tgm:o4 (3.5) BS02 MG ? GO:0002181 ... P87262 27827794
    406486 5tgm:o5 (3.5) BS01 rna ? GO:0000463 ... P0CX84 27827794
    406487 5tgm:o5 (3.5) BS02 rna ? GO:0000463 ... P0CX84 27827794
    406488 5tgm:o6 (3.5) BS01 rna ? GO:0002181 ... P05745 27827794
    406489 5tgm:o7 (3.5) BS01 rna ? GO:0000448 ... P49166 27827794
    406490 5tgm:o7 (3.5) BS02 rna ? GO:0000448 ... P49166 27827794
    406491 5tgm:o7 (3.5) BS03 ZN ? GO:0000448 ... P49166 27827794
    406492 5tgm:o7 (3.5) BS04 OHX ? GO:0000448 ... P49166 27827794
    406493 5tgm:o8 (3.5) BS01 rna ? GO:0002181 ... P49167 27827794
    406494 5tgm:o9 (3.5) BS01 rna ? GO:0002181 ... P04650 27827794
    406495 5tgm:o9 (3.5) BS02 rna ? GO:0002181 ... P04650 27827794
    406496 5tgm:o9 (3.5) BS03 OHX ? GO:0002181 ... P04650 27827794
    406497 5tgm:p0 (3.5) BS01 rna ? GO:0042254 ... N/A 27827794
    406498 5tgm:q0 (3.5) BS01 rna ? GO:0003735 ... P0CH08 27827794
    406499 5tgm:q0 (3.5) BS02 ZN ? GO:0003735 ... P0CH08 27827794
    406500 5tgm:q2 (3.5) BS01 rna ? GO:0002181 ... P0CX27 27827794
    406501 5tgm:q2 (3.5) BS02 ZN ? GO:0002181 ... P0CX27 27827794
    406502 5tgm:q2 (3.5) BS03 OHX ? GO:0002181 ... P0CX27 27827794
    406503 5tgm:q3 (3.5) BS01 rna ? GO:0002181 ... P0CX25 27827794
    406504 5tgm:q3 (3.5) BS02 ZN ? GO:0002181 ... P0CX25 27827794
    406505 5tgm:s0 (3.5) BS01 rna ? GO:0003735 ... P32905 27827794
    406506 5tgm:s1 (3.5) BS01 rna ? GO:0003735 ... P33442 27827794
    406507 5tgm:s1 (3.5) BS02 rna ? GO:0003735 ... P33442 27827794
    406508 5tgm:s1 (3.5) BS03 OHX ? GO:0003735 ... P33442 27827794
    406509 5tgm:s2 (3.5) BS01 rna ? GO:0003723 ... P25443 27827794
    406510 5tgm:s3 (3.5) BS01 rna ? GO:0000054 ... P05750 27827794
    406511 5tgm:s4 (3.5) BS01 rna ? GO:0002181 ... P0CX35 27827794
    406512 5tgm:s4 (3.5) BS02 MG ? GO:0002181 ... P0CX35 27827794
    406513 5tgm:s5 (3.5) BS01 rna ? GO:0000028 ... P26783 27827794
    406514 5tgm:s6 (3.5) BS01 rna ? GO:0000462 ... P0CX37 27827794
    406515 5tgm:s6 (3.5) BS02 MG ? GO:0000462 ... P0CX37 27827794
    406516 5tgm:s7 (3.5) BS01 rna ? GO:0002181 ... P26786 27827794
    406517 5tgm:s8 (3.5) BS01 rna ? GO:0003735 ... A0A0J9X221 27827794
    406518 5tgm:s8 (3.5) BS02 rna ? GO:0003735 ... A0A0J9X221 27827794
    406519 5tgm:s8 (3.5) BS03 OHX ? GO:0003735 ... A0A0J9X221 27827794
    406520 5tgm:s9 (3.5) BS01 rna ? GO:0000462 ... O13516 27827794
    406521 5tgm:s9 (3.5) BS02 OHX ? GO:0000462 ... O13516 27827794
    406522 5tgm:sM (3.5) BS01 rna ? N/A P39015 27827794
    406523 5tgm:sM (3.5) BS02 rna ? N/A P39015 27827794
    406524 5tgm:sR (3.5) BS01 rna ? GO:0001965 ... P38011 27827794
    406525 5tgm:sR (3.5) BS02 OHX ? GO:0001965 ... P38011 27827794
    406526 5tgq:A (1.88) BS01 CA ? GO:0046872 ... A0A1S4NYF7 28180307
    406527 5tgs:A (2.548) BS01 SF4 4.3.99.3 GO:0000287 ... O31677 28045519
    406528 5tgs:B (2.548) BS01 SF4 4.3.99.3 GO:0000287 ... O31677 28045519
    406529 5tgu:A (2.35) BS01 SIA ? GO:0019031 ... A0A059T4A1 28402848
    406530 5tgu:C (2.35) BS01 SIA ? GO:0019031 ... A0A059T4A1 28402848
    406531 5tgu:E (2.35) BS01 SIA ? GO:0019031 ... A0A059T4A1 28402848
    406532 5tgv:A (2.974) BS01 SIA ? GO:0019031 ... A0A059T4A1 28402848
    406533 5tgv:C (2.974) BS01 SIA ? GO:0019031 ... A0A059T4A1 28402848
    406534 5tgv:E (2.974) BS01 SIA ? GO:0019031 ... A0A059T4A1 28402848
    406535 5tgx:A (2.3) BS01 dna ? GO:0046872 ... A0A1S4NYF7 28180307
    406536 5tgx:A (2.3) BS02 dna ? GO:0046872 ... A0A1S4NYF7 28180307
    406537 5tgx:A (2.3) BS03 CA ? GO:0046872 ... A0A1S4NYF7 28180307
    406538 5tgx:B (2.3) BS01 dna ? GO:0046872 ... A0A1S4NYF7 28180307
    406539 5tgx:B (2.3) BS02 dna ? GO:0046872 ... A0A1S4NYF7 28180307
    406540 5tgx:B (2.3) BS03 CA ? GO:0046872 ... A0A1S4NYF7 28180307
    406541 5tgx:C (2.3) BS01 dna ? GO:0046872 ... A0A1S4NYF7 28180307
    406542 5tgx:C (2.3) BS02 dna ? GO:0046872 ... A0A1S4NYF7 28180307
    406543 5tgx:C (2.3) BS03 CA ? GO:0046872 ... A0A1S4NYF7 28180307
    406544 5tgx:D (2.3) BS01 dna ? GO:0046872 ... A0A1S4NYF7 28180307
    406545 5tgx:D (2.3) BS02 dna ? GO:0046872 ... A0A1S4NYF7 28180307
    406546 5tgx:D (2.3) BS03 CA ? GO:0046872 ... A0A1S4NYF7 28180307
    406547 5tgy:A (-1.00) BS01 7BU N/A GO:0044780 ... N/A 29168496
    406548 5tgz:A (2.8) BS01 ZDG ? GO:0004930 ... P00323
    P21554
    27768894
    406549 5tgz:A (2.8) BS02 FMN ? GO:0004930 ... P00323
    P21554
    27768894
    406550 5th1:A (2.191) BS01 SIA ? GO:0019031 ... A0A059T4A1 28402848
    406551 5th1:C (2.191) BS01 SIA ? GO:0019031 ... A0A059T4A1 28402848
    406552 5th1:E (2.191) BS01 SIA ? GO:0019031 ... A0A059T4A1 28402848
    406553 5th2:A (1.84) BS01 peptide N/A N/A N/A 27834791
    406554 5th2:B (1.84) BS01 peptide N/A N/A N/A 27834791
    406555 5th2:C (1.84) BS01 peptide N/A N/A N/A 27834791
    406556 5th2:D (1.84) BS01 peptide N/A N/A N/A 27834791
    406557 5th3:A (2.33) BS01 dna ? GO:0046872 ... A0A1S4NYF7 28180307
    406558 5th3:A (2.33) BS02 dna ? GO:0046872 ... A0A1S4NYF7 28180307
    406559 5th3:A (2.33) BS03 dna ? GO:0046872 ... A0A1S4NYF7 28180307
    406560 5th3:A (2.33) BS04 dna ? GO:0046872 ... A0A1S4NYF7 28180307
    406561 5th3:A (2.33) BS05 MG ? GO:0046872 ... A0A1S4NYF7 28180307
    406562 5th3:B (2.33) BS01 dna ? GO:0046872 ... A0A1S4NYF7 28180307
    406563 5th3:B (2.33) BS02 dna ? GO:0046872 ... A0A1S4NYF7 28180307
    406564 5th3:B (2.33) BS03 dna ? GO:0046872 ... A0A1S4NYF7 28180307
    406565 5th3:B (2.33) BS04 dna ? GO:0046872 ... A0A1S4NYF7 28180307
    406566 5th3:B (2.33) BS05 MG ? GO:0046872 ... A0A1S4NYF7 28180307
    406567 5th3:C (2.33) BS01 dna ? GO:0046872 ... A0A1S4NYF7 28180307
    406568 5th3:C (2.33) BS02 dna ? GO:0046872 ... A0A1S4NYF7 28180307
    406569 5th3:C (2.33) BS03 dna ? GO:0046872 ... A0A1S4NYF7 28180307
    406570 5th3:C (2.33) BS04 dna ? GO:0046872 ... A0A1S4NYF7 28180307
    406571 5th3:C (2.33) BS05 MG ? GO:0046872 ... A0A1S4NYF7 28180307
    406572 5th3:D (2.33) BS01 dna ? GO:0046872 ... A0A1S4NYF7 28180307
    406573 5th3:D (2.33) BS02 dna ? GO:0046872 ... A0A1S4NYF7 28180307
    406574 5th3:D (2.33) BS03 dna ? GO:0046872 ... A0A1S4NYF7 28180307
    406575 5th3:D (2.33) BS04 dna ? GO:0046872 ... A0A1S4NYF7 28180307
    406576 5th3:D (2.33) BS05 MG ? GO:0046872 ... A0A1S4NYF7 28180307
    406577 5th4:A (1.47) BS01 ZN 4.2.1.1
    4.2.1.69
    GO:0002009 ... P00918 28389830
    406578 5th4:A (1.47) BS02 BEW 4.2.1.1
    4.2.1.69
    GO:0002009 ... P00918 28389830
    406579 5th5:A (2.407) BS01 SF4 4.3.99.3 GO:0000287 ... O31677 28045519
    406580 5th5:A (2.407) BS02 7C5 4.3.99.3 GO:0000287 ... O31677 28045519
    406581 5th5:A (2.407) BS03 MET 4.3.99.3 GO:0000287 ... O31677 28045519
    406582 5th5:B (2.407) BS01 SF4 4.3.99.3 GO:0000287 ... O31677 28045519
    406583 5th5:B (2.407) BS02 7C5 4.3.99.3 GO:0000287 ... O31677 28045519
    406584 5th5:B (2.407) BS03 MET 4.3.99.3 GO:0000287 ... O31677 28045519
    406585 5th5:C (2.407) BS01 SF4 4.3.99.3 GO:0000287 ... O31677 28045519
    406586 5th5:C (2.407) BS02 7C5 4.3.99.3 GO:0000287 ... O31677 28045519
    406587 5th5:C (2.407) BS03 MET 4.3.99.3 GO:0000287 ... O31677 28045519
    406588 5th5:D (2.407) BS01 SF4 4.3.99.3 GO:0000287 ... O31677 28045519
    406589 5th5:D (2.407) BS02 7C5 4.3.99.3 GO:0000287 ... O31677 28045519
    406590 5th5:D (2.407) BS03 MET 4.3.99.3 GO:0000287 ... O31677 28045519
    406591 5th6:A (1.7) BS01 ZN 3.4.24.35 GO:0004222 ... P14780 28235803
    406592 5th6:A (1.7) BS02 ZN 3.4.24.35 GO:0004222 ... P14780 28235803
    406593 5th6:A (1.7) BS03 CA 3.4.24.35 GO:0004222 ... P14780 28235803
    406594 5th6:A (1.7) BS04 CA 3.4.24.35 GO:0004222 ... P14780 28235803
    406595 5th6:A (1.7) BS05 CA 3.4.24.35 GO:0004222 ... P14780 28235803
    406596 5th6:B (1.7) BS01 ZN 3.4.24.35 GO:0004222 ... P14780 28235803
    406597 5th6:B (1.7) BS02 ZN 3.4.24.35 GO:0004222 ... P14780 28235803
    406598 5th6:B (1.7) BS03 CA 3.4.24.35 GO:0004222 ... P14780 28235803
    406599 5th6:B (1.7) BS04 CA 3.4.24.35 GO:0004222 ... P14780 28235803
    406600 5th6:B (1.7) BS05 CA 3.4.24.35 GO:0004222 ... P14780 28235803

    Reference:
  • Chengxin Zhang, Xi Zhang, Lydia Freddolino, and Yang Zhang. BioLiP2: an updated structure database for biologically relevent ligand-protein interactions, Nucleic Acids Research, gkad630 (2023).
  • Jianyi Yang, Ambrish Roy, and Yang Zhang. BioLiP: a semi-manually curated database for biologically relevant ligand-protein interactions, Nucleic Acids Research, 41: D1096-D1103 (2013) (download the PDF file).