SEQ2FUN

BioLiP
Download all results in tab-seperated text for 942758 receptor-ligand interactions, whose format is explained at readme.txt.
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    # PDB
    (Resolution Å)
    Site # Ligand EC number GO terms UniProt PubMed Binding
    affinity
    415201 5vjh:C (4.0) BS02 AGS ? GO:0005515 ... P31539 28619716
    415202 5vjh:C (4.0) BS03 AGS ? GO:0005515 ... P31539 28619716
    415203 5vjh:D (4.0) BS01 peptide ? GO:0005515 ... P31539 28619716
    415204 5vjh:D (4.0) BS02 AGS ? GO:0005515 ... P31539 28619716
    415205 5vjh:D (4.0) BS03 AGS ? GO:0005515 ... P31539 28619716
    415206 5vjh:D (4.0) BS04 AGS ? GO:0005515 ... P31539 28619716
    415207 5vjh:E (4.0) BS01 peptide ? GO:0005515 ... P31539 28619716
    415208 5vjh:E (4.0) BS02 AGS ? GO:0005515 ... P31539 28619716
    415209 5vjh:E (4.0) BS03 AGS ? GO:0005515 ... P31539 28619716
    415210 5vjh:F (4.0) BS01 AGS ? GO:0005515 ... P31539 28619716
    415211 5vjh:F (4.0) BS02 AGS ? GO:0005515 ... P31539 28619716
    415212 5vjj:A (2.52) BS01 ZN ? N/A B2ZCS6 28817232
    415213 5vjj:A (2.52) BS02 ZN ? N/A B2ZCS6 28817232
    415214 5vjj:A (2.52) BS03 ZN ? N/A B2ZCS6 28817232
    415215 5vjj:B (2.52) BS01 ZN ? N/A B2ZCS6 28817232
    415216 5vjj:B (2.52) BS02 ZN ? N/A B2ZCS6 28817232
    415217 5vjj:B (2.52) BS03 ZN ? N/A B2ZCS6 28817232
    415218 5vjl:A (2.597) BS01 SIA ? GO:0019031 ... R4NN21 28617868
    415219 5vjm:A (2.909) BS01 SIA ? GO:0019031 ... R4NN21 28617868
    415220 5vjn:A (1.78) BS01 IR8 2.4.2.7 GO:0002055 ... P49435 29178779 MOAD: Ki=8.7uM
    415221 5vjn:A (1.78) BS02 ADE 2.4.2.7 GO:0002055 ... P49435 29178779
    415222 5vjn:B (1.78) BS01 IR8 2.4.2.7 GO:0002055 ... P49435 29178779 MOAD: Ki=8.7uM
    415223 5vjp:A (1.98) BS01 IR9 2.4.2.7 GO:0002055 ... P49435 29178779 MOAD: Ki=14.9uM
    415224 5vjp:B (1.98) BS01 IR9 2.4.2.7 GO:0002055 ... P49435 29178779 MOAD: Ki=14.9uM
    415225 5vjp:B (1.98) BS02 ADE 2.4.2.7 GO:0002055 ... P49435 29178779
    415226 5vjs:A (2.0) BS01 HEM N/A N/A N/A 35999239
    415227 5vjs:A (2.0) BS02 9D7 N/A N/A N/A 35999239
    415228 5vjs:A (2.0) BS03 ZN N/A N/A N/A 35999239
    415229 5vjs:A (2.0) BS04 ZN N/A N/A N/A 35999239
    415230 5vjt:A (1.45) BS01 ZN N/A N/A N/A 35999239
    415231 5vjt:A (1.45) BS02 ZN N/A N/A N/A 35999239
    415232 5vjt:A (1.45) BS03 HEM N/A N/A N/A 35999239
    415233 5vju:A (2.08) BS01 HEM N/A N/A N/A 35999239
    415234 5vjv:A (1.95) BS01 PO4 3.1.3.48 GO:0004721 ... Q9SR62 29615518
    415235 5vjv:A (1.95) BS02 ZN 3.1.3.48 GO:0004721 ... Q9SR62 29615518
    415236 5vjv:A (1.95) BS03 ZN 3.1.3.48 GO:0004721 ... Q9SR62 29615518
    415237 5vjw:A (1.8) BS01 ZN 3.1.3.48 GO:0004721 ... Q9SR62 29615518
    415238 5vjw:A (1.8) BS02 ZN 3.1.3.48 GO:0004721 ... Q9SR62 29615518
    415239 5vjw:A (1.8) BS03 WO4 3.1.3.48 GO:0004721 ... Q9SR62 29615518
    415240 5vjw:A (1.8) BS04 WO4 3.1.3.48 GO:0004721 ... Q9SR62 29615518
    415241 5vjz:A (2.0) BS01 PLA 2.6.1.1
    2.6.1.3
    GO:0004069 ... P00503 29038582
    415242 5vjz:B (2.0) BS01 PLA 2.6.1.1
    2.6.1.3
    GO:0004069 ... P00503 29038582
    415243 5vk0:A (1.8) BS01 peptide 2.3.2.27 GO:0005634 ... Q00987 30809370
    415244 5vk0:A (1.8) BS02 peptide 2.3.2.27 GO:0005634 ... Q00987 30809370
    415245 5vk0:C (1.8) BS01 peptide 2.3.2.27 GO:0005634 ... Q00987 30809370
    415246 5vk0:E (1.8) BS01 peptide 2.3.2.27 GO:0005634 ... Q00987 30809370
    415247 5vk0:E (1.8) BS02 peptide 2.3.2.27 GO:0005634 ... Q00987 30809370
    415248 5vk0:G (1.8) BS01 peptide 2.3.2.27 GO:0005634 ... Q00987 30809370
    415249 5vk0:G (1.8) BS02 peptide 2.3.2.27 GO:0005634 ... Q00987 30809370
    415250 5vk0:I (1.8) BS01 peptide 2.3.2.27 GO:0005634 ... Q00987 30809370
    415251 5vk0:K (1.8) BS01 peptide 2.3.2.27 GO:0005634 ... Q00987 30809370
    415252 5vk0:K (1.8) BS02 peptide 2.3.2.27 GO:0005634 ... Q00987 30809370
    415253 5vk0:M (1.8) BS01 peptide 2.3.2.27 GO:0005634 ... Q00987 30809370
    415254 5vk0:M (1.8) BS02 peptide 2.3.2.27 GO:0005634 ... Q00987 30809370
    415255 5vk0:O (1.8) BS01 peptide 2.3.2.27 GO:0005634 ... Q00987 30809370
    415256 5vk0:Q (1.8) BS01 peptide 2.3.2.27 GO:0005634 ... Q00987 30809370
    415257 5vk0:Q (1.8) BS02 peptide 2.3.2.27 GO:0005634 ... Q00987 30809370
    415258 5vk0:S (1.8) BS01 peptide 2.3.2.27 GO:0005634 ... Q00987 30809370
    415259 5vk0:S (1.8) BS02 peptide 2.3.2.27 GO:0005634 ... Q00987 30809370
    415260 5vk0:U (1.8) BS01 peptide 2.3.2.27 GO:0005634 ... Q00987 30809370
    415261 5vk0:U (1.8) BS02 peptide 2.3.2.27 GO:0005634 ... Q00987 30809370
    415262 5vk0:W (1.8) BS01 peptide 2.3.2.27 GO:0005634 ... Q00987 30809370
    415263 5vk1:A (2.69) BS01 peptide ? GO:0005634 ... O15151 30809370
    415264 5vk1:A (2.69) BS02 peptide ? GO:0005634 ... O15151 30809370
    415265 5vk1:C (2.69) BS01 peptide ? GO:0005634 ... O15151 30809370
    415266 5vk1:E (2.69) BS01 peptide ? GO:0005634 ... O15151 30809370
    415267 5vk1:E (2.69) BS02 peptide ? GO:0005634 ... O15151 30809370
    415268 5vk1:G (2.69) BS01 peptide ? GO:0005634 ... O15151 30809370
    415269 5vk1:I (2.69) BS01 peptide ? GO:0005634 ... O15151 30809370
    415270 5vk1:I (2.69) BS02 peptide ? GO:0005634 ... O15151 30809370
    415271 5vk1:K (2.69) BS01 peptide ? GO:0005634 ... O15151 30809370
    415272 5vk1:M (2.69) BS01 peptide ? GO:0005634 ... O15151 30809370
    415273 5vk1:O (2.69) BS01 peptide ? GO:0005634 ... O15151 30809370
    415274 5vk2:A (3.201) BS01 MAN ? GO:0019031 ... P08669 28572385
    415275 5vk2:B (3.201) BS01 MAN ? GO:0019031 ... P08669 28572385
    415276 5vk2:C (3.201) BS01 MAN ? GO:0019031 ... P08669 28572385
    415277 5vk2:b (3.201) BS01 FUC ? GO:0019031 ... P08669 28572385
    415278 5vk3:B (2.114) BS01 ZN ? GO:0006338 ... G0RYC6
    G0SDW4
    28607149
    415279 5vk3:B (2.114) BS02 ZN ? GO:0006338 ... G0RYC6
    G0SDW4
    28607149
    415280 5vk3:B (2.114) BS03 ZN ? GO:0006338 ... G0RYC6
    G0SDW4
    28607149
    415281 5vk3:B (2.114) BS04 ZN ? GO:0006338 ... G0RYC6
    G0SDW4
    28607149
    415282 5vk3:B (2.114) BS05 ZN ? GO:0006338 ... G0RYC6
    G0SDW4
    28607149
    415283 5vk3:B (2.114) BS06 ZN ? GO:0006338 ... G0RYC6
    G0SDW4
    28607149
    415284 5vk3:B (2.114) BS07 ZN ? GO:0006338 ... G0RYC6
    G0SDW4
    28607149
    415285 5vk3:B (2.114) BS08 ZN ? GO:0006338 ... G0RYC6
    G0SDW4
    28607149
    415286 5vk4:A (2.65) BS01 ANP 6.3.3.1 GO:0004637 ... Q5F973 N/A
    415287 5vk4:A (2.65) BS02 MG 6.3.3.1 GO:0004637 ... Q5F973 N/A
    415288 5vk4:A (2.65) BS03 ANP 6.3.3.1 GO:0004637 ... Q5F973 N/A
    415289 5vk4:B (2.65) BS01 ANP 6.3.3.1 GO:0004637 ... Q5F973 N/A
    415290 5vk4:B (2.65) BS02 MG 6.3.3.1 GO:0004637 ... Q5F973 N/A
    415291 5vka:A (1.169) BS01 MN 1.13.12.19
    1.14.20.7
    GO:0009693 ... P32021 28780854
    415292 5vka:A (1.169) BS02 AKG 1.13.12.19
    1.14.20.7
    GO:0009693 ... P32021 28780854
    415293 5vka:A (1.169) BS03 HAR 1.13.12.19
    1.14.20.7
    GO:0009693 ... P32021 28780854
    415294 5vkb:A (1.139) BS01 MN 1.13.12.19
    1.14.20.7
    GO:0009693 ... P32021 28780854
    415295 5vkb:A (1.139) BS02 AKG 1.13.12.19
    1.14.20.7
    GO:0009693 ... P32021 28780854
    415296 5vkb:A (1.139) BS03 AAR 1.13.12.19
    1.14.20.7
    GO:0009693 ... P32021 28780854
    415297 5vkc:A (2.31) BS01 9EA ? GO:0042981 ... Q07820 25679114 BindingDB: Ki=98nM
    415298 5vkc:A (2.31) BS02 ZN ? GO:0042981 ... Q07820 25679114
    415299 5vkc:B (2.31) BS01 9EA ? GO:0042981 ... Q07820 25679114 BindingDB: Ki=98nM
    415300 5vkc:B (2.31) BS02 ZN ? GO:0042981 ... Q07820 25679114
    415301 5vkg:A (-1.00) BS01 4N1 ? GO:0015031 ... Q99816 29123089
    415302 5vki:B (1.9) BS01 GAL ? GO:0019028 ... A7YCM0 29136651
    415303 5vkl:A (2.198) BS01 peptide ? GO:0140673 ... P23615 28826505
    415304 5vkm:A (2.2) BS01 GAL ? N/A P20273 28970495
    415305 5vkm:A (2.2) BS02 SIA ? N/A P20273 28970495
    415306 5vkr:A (1.8) BS01 ZN 1.1.1.1 GO:0004022 ... P00327 28640600
    415307 5vkr:A (1.8) BS02 ZN 1.1.1.1 GO:0004022 ... P00327 28640600
    415308 5vkr:A (1.8) BS03 APR 1.1.1.1 GO:0004022 ... P00327 28640600 MOAD: Ki=41uM
    415309 5vks:A (1.94) BS01 GAL ? GO:0019028 ... A7YCM0 29136651
    415310 5vks:A (1.94) BS02 GAL ? GO:0019028 ... A7YCM0 29136651
    415311 5vks:B (1.94) BS01 GAL ? GO:0019028 ... A7YCM0 29136651
    415312 5vks:B (1.94) BS02 GAL ? GO:0019028 ... A7YCM0 29136651
    415313 5vkt:A (1.827) BS01 ZN 1.1.1.195 GO:0000166 ... C5XC49 28606901
    415314 5vkt:A (1.827) BS02 ZN 1.1.1.195 GO:0000166 ... C5XC49 28606901
    415315 5vkt:A (1.827) BS03 NAP 1.1.1.195 GO:0000166 ... C5XC49 28606901
    415316 5vkt:B (1.827) BS01 ZN 1.1.1.195 GO:0000166 ... C5XC49 28606901
    415317 5vkt:B (1.827) BS02 ZN 1.1.1.195 GO:0000166 ... C5XC49 28606901
    415318 5vkw:B (1.998) BS01 CA 4.3.2.2 GO:0003824 ... A0A1D8PT56 N/A
    415319 5vkw:B (1.998) BS02 MG 4.3.2.2 GO:0003824 ... A0A1D8PT56 N/A
    415320 5vkx:A (1.37) BS01 S18 ? GO:0005576 ... P22629 29645031
    415321 5vl0:A (1.2) BS01 ZN 1.1.1.1 GO:0004022 ... P00327 28640600
    415322 5vl0:A (1.2) BS02 ZN 1.1.1.1 GO:0004022 ... P00327 28640600
    415323 5vl0:A (1.2) BS03 NAI 1.1.1.1 GO:0004022 ... P00327 28640600
    415324 5vl0:A (1.2) BS04 BNF 1.1.1.1 GO:0004022 ... P00327 28640600 MOAD: Ki=0.74uM
    415325 5vl0:B (1.2) BS01 ZN 1.1.1.1 GO:0004022 ... P00327 28640600
    415326 5vl0:B (1.2) BS02 ZN 1.1.1.1 GO:0004022 ... P00327 28640600
    415327 5vl0:B (1.2) BS03 NAI 1.1.1.1 GO:0004022 ... P00327 28640600
    415328 5vl0:B (1.2) BS04 BNF 1.1.1.1 GO:0004022 ... P00327 28640600 MOAD: Ki=0.74uM
    415329 5vl0:C (1.2) BS01 ZN 1.1.1.1 GO:0004022 ... P00327 28640600
    415330 5vl0:C (1.2) BS02 ZN 1.1.1.1 GO:0004022 ... P00327 28640600
    415331 5vl0:C (1.2) BS03 NAI 1.1.1.1 GO:0004022 ... P00327 28640600
    415332 5vl0:C (1.2) BS04 BNF 1.1.1.1 GO:0004022 ... P00327 28640600 MOAD: Ki=0.74uM
    415333 5vl0:D (1.2) BS01 ZN 1.1.1.1 GO:0004022 ... P00327 28640600
    415334 5vl0:D (1.2) BS02 ZN 1.1.1.1 GO:0004022 ... P00327 28640600
    415335 5vl0:D (1.2) BS03 NAI 1.1.1.1 GO:0004022 ... P00327 28640600
    415336 5vl0:D (1.2) BS04 BNF 1.1.1.1 GO:0004022 ... P00327 28640600 MOAD: Ki=0.74uM
    415337 5vl1:A (2.7) BS01 LYS 6.1.1.6 GO:0000049 ... A0PV47 N/A
    415338 5vl1:B (2.7) BS01 LYS 6.1.1.6 GO:0000049 ... A0PV47 N/A
    415339 5vl1:C (2.7) BS01 LYS 6.1.1.6 GO:0000049 ... A0PV47 N/A
    415340 5vl1:D (2.7) BS01 LYS 6.1.1.6 GO:0000049 ... A0PV47 N/A
    415341 5vl2:A (1.9) BS01 9EG N/A N/A N/A 30033524 MOAD: Kd=3.77nM
    415342 5vl2:B (1.9) BS01 9EG N/A N/A N/A 30033524 MOAD: Kd=3.77nM
    415343 5vl2:C (1.9) BS01 9EG N/A N/A N/A 30033524 MOAD: Kd=3.77nM
    415344 5vl2:D (1.9) BS01 9EG N/A N/A N/A 30033524 MOAD: Kd=3.77nM
    415345 5vl2:E (1.9) BS01 9EG N/A N/A N/A 30033524 MOAD: Kd=3.77nM
    415346 5vl2:F (1.9) BS01 9EG N/A N/A N/A 30033524 MOAD: Kd=3.77nM
    415347 5vl2:G (1.9) BS01 9EG N/A N/A N/A 30033524 MOAD: Kd=3.77nM
    415348 5vl2:H (1.9) BS01 9EG N/A N/A N/A 30033524 MOAD: Kd=3.77nM
    415349 5vl5:A (1.46) BS01 S31 ? GO:0005576 ... P22629 29645031
    415350 5vl8:A (1.7) BS01 S32 ? GO:0005576 ... P22629 29645031
    415351 5vl9:A (2.16) BS01 dna ? GO:0000976 ... E3G817 30190458
    415352 5vl9:A (2.16) BS02 dna ? GO:0000976 ... E3G817 30190458
    415353 5vl9:B (2.16) BS01 dna ? GO:0000976 ... E3G817 30190458
    415354 5vl9:C (2.16) BS01 dna ? GO:0000976 ... E3G817 30190458
    415355 5vl9:C (2.16) BS02 dna ? GO:0000976 ... E3G817 30190458
    415356 5vl9:D (2.16) BS01 dna ? GO:0000976 ... E3G817 30190458
    415357 5vla:A (2.4) BS01 peptide 3.4.21.- GO:0004252 ... Q8NBP7 28825733
    415358 5vla:A (2.4) BS02 CA 3.4.21.- GO:0004252 ... Q8NBP7 28825733
    415359 5vlb:A (2.25) BS01 ZN 1.1.1.23 GO:0000105 ... G7IKX3 28874718
    415360 5vlb:A (2.25) BS02 IMD 1.1.1.23 GO:0000105 ... G7IKX3 28874718
    415361 5vlb:B (2.25) BS01 ZN 1.1.1.23 GO:0000105 ... G7IKX3 28874718
    415362 5vlb:B (2.25) BS02 IMD 1.1.1.23 GO:0000105 ... G7IKX3 28874718
    415363 5vlb:C (2.25) BS01 ZN 1.1.1.23 GO:0000105 ... G7IKX3 28874718
    415364 5vlb:C (2.25) BS02 IMD 1.1.1.23 GO:0000105 ... G7IKX3 28874718
    415365 5vlb:D (2.25) BS01 ZN 1.1.1.23 GO:0000105 ... G7IKX3 28874718
    415366 5vlb:D (2.25) BS02 IMD 1.1.1.23 GO:0000105 ... G7IKX3 28874718
    415367 5vlb:E (2.25) BS01 ZN 1.1.1.23 GO:0000105 ... G7IKX3 28874718
    415368 5vlb:E (2.25) BS02 IMD 1.1.1.23 GO:0000105 ... G7IKX3 28874718
    415369 5vlb:F (2.25) BS01 ZN 1.1.1.23 GO:0000105 ... G7IKX3 28874718
    415370 5vlb:F (2.25) BS02 IMD 1.1.1.23 GO:0000105 ... G7IKX3 28874718
    415371 5vlc:A (1.97) BS01 HSO 1.1.1.23 GO:0000105 ... G7IKX3 28874718
    415372 5vlc:A (1.97) BS02 ZN 1.1.1.23 GO:0000105 ... G7IKX3 28874718
    415373 5vlc:A (1.97) BS03 HSO 1.1.1.23 GO:0000105 ... G7IKX3 28874718
    415374 5vlc:B (1.97) BS01 HSO 1.1.1.23 GO:0000105 ... G7IKX3 28874718
    415375 5vlc:B (1.97) BS02 ZN 1.1.1.23 GO:0000105 ... G7IKX3 28874718
    415376 5vlc:B (1.97) BS03 HSO 1.1.1.23 GO:0000105 ... G7IKX3 28874718
    415377 5vlc:C (1.97) BS01 ZN 1.1.1.23 GO:0000105 ... G7IKX3 28874718
    415378 5vlc:C (1.97) BS02 HSO 1.1.1.23 GO:0000105 ... G7IKX3 28874718
    415379 5vlc:C (1.97) BS03 HSO 1.1.1.23 GO:0000105 ... G7IKX3 28874718
    415380 5vlc:D (1.97) BS01 HSO 1.1.1.23 GO:0000105 ... G7IKX3 28874718
    415381 5vlc:D (1.97) BS02 ZN 1.1.1.23 GO:0000105 ... G7IKX3 28874718
    415382 5vlc:D (1.97) BS03 HSO 1.1.1.23 GO:0000105 ... G7IKX3 28874718
    415383 5vlc:E (1.97) BS01 ZN 1.1.1.23 GO:0000105 ... G7IKX3 28874718
    415384 5vlc:E (1.97) BS02 HSO 1.1.1.23 GO:0000105 ... G7IKX3 28874718
    415385 5vlc:E (1.97) BS03 HSO 1.1.1.23 GO:0000105 ... G7IKX3 28874718
    415386 5vlc:F (1.97) BS01 ZN 1.1.1.23 GO:0000105 ... G7IKX3 28874718
    415387 5vlc:F (1.97) BS02 HSO 1.1.1.23 GO:0000105 ... G7IKX3 28874718
    415388 5vld:A (2.59) BS01 HIS 1.1.1.23 GO:0000105 ... G7IKX3 28874718
    415389 5vld:A (2.59) BS02 NAD 1.1.1.23 GO:0000105 ... G7IKX3 28874718
    415390 5vld:A (2.59) BS03 ZN 1.1.1.23 GO:0000105 ... G7IKX3 28874718
    415391 5vld:A (2.59) BS04 HIS 1.1.1.23 GO:0000105 ... G7IKX3 28874718
    415392 5vld:B (2.59) BS01 HIS 1.1.1.23 GO:0000105 ... G7IKX3 28874718
    415393 5vld:B (2.59) BS02 ZN 1.1.1.23 GO:0000105 ... G7IKX3 28874718
    415394 5vld:B (2.59) BS03 HIS 1.1.1.23 GO:0000105 ... G7IKX3 28874718
    415395 5vld:B (2.59) BS04 NAD 1.1.1.23 GO:0000105 ... G7IKX3 28874718
    415396 5vld:C (2.59) BS01 ZN 1.1.1.23 GO:0000105 ... G7IKX3 28874718
    415397 5vld:C (2.59) BS02 HIS 1.1.1.23 GO:0000105 ... G7IKX3 28874718
    415398 5vld:C (2.59) BS03 NAD 1.1.1.23 GO:0000105 ... G7IKX3 28874718
    415399 5vld:C (2.59) BS04 HIS 1.1.1.23 GO:0000105 ... G7IKX3 28874718
    415400 5vld:D (2.59) BS01 HIS 1.1.1.23 GO:0000105 ... G7IKX3 28874718

    Reference:
  • Chengxin Zhang, Xi Zhang, Lydia Freddolino, and Yang Zhang. BioLiP2: an updated structure database for biologically relevent ligand-protein interactions, Nucleic Acids Research, gkad630 (2023).
  • Jianyi Yang, Ambrish Roy, and Yang Zhang. BioLiP: a semi-manually curated database for biologically relevant ligand-protein interactions, Nucleic Acids Research, 41: D1096-D1103 (2013) (download the PDF file).