SEQ2FUN

BioLiP
Download all results in tab-seperated text for 942758 receptor-ligand interactions, whose format is explained at readme.txt.
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    # PDB
    (Resolution Å)
    Site # Ligand EC number GO terms UniProt PubMed Binding
    affinity
    415401 5vld:D (2.59) BS02 ZN 1.1.1.23 GO:0000105 ... G7IKX3 28874718
    415402 5vld:D (2.59) BS03 HIS 1.1.1.23 GO:0000105 ... G7IKX3 28874718
    415403 5vld:D (2.59) BS04 NAD 1.1.1.23 GO:0000105 ... G7IKX3 28874718
    415404 5vld:E (2.59) BS01 ZN 1.1.1.23 GO:0000105 ... G7IKX3 28874718
    415405 5vld:E (2.59) BS02 HIS 1.1.1.23 GO:0000105 ... G7IKX3 28874718
    415406 5vld:E (2.59) BS03 NAD 1.1.1.23 GO:0000105 ... G7IKX3 28874718
    415407 5vld:E (2.59) BS04 HIS 1.1.1.23 GO:0000105 ... G7IKX3 28874718
    415408 5vld:F (2.59) BS01 HIS 1.1.1.23 GO:0000105 ... G7IKX3 28874718
    415409 5vld:F (2.59) BS02 ZN 1.1.1.23 GO:0000105 ... G7IKX3 28874718
    415410 5vld:F (2.59) BS03 HIS 1.1.1.23 GO:0000105 ... G7IKX3 28874718
    415411 5vld:F (2.59) BS04 NAD 1.1.1.23 GO:0000105 ... G7IKX3 28874718
    415412 5vle:A (0.85) BS01 JSD 3.5.2.6 GO:0008800 ... H6UQI0 29095570
    415413 5vle:A (0.85) BS02 JSC 3.5.2.6 GO:0008800 ... H6UQI0 29095570
    415414 5vle:A (0.85) BS03 JSD 3.5.2.6 GO:0008800 ... H6UQI0 29095570
    415415 5vle:A (0.85) BS04 JSE 3.5.2.6 GO:0008800 ... H6UQI0 29095570
    415416 5vle:B (0.85) BS01 JSD 3.5.2.6 GO:0008800 ... H6UQI0 29095570
    415417 5vle:B (0.85) BS02 JSE 3.5.2.6 GO:0008800 ... H6UQI0 29095570
    415418 5vlg:A (2.932) BS01 MGR ? GO:0000976 ... E3G817 30190458
    415419 5vlg:B (2.932) BS01 MGR ? GO:0000976 ... E3G817 30190458
    415420 5vlg:C (2.932) BS01 MGR ? GO:0000976 ... E3G817 30190458
    415421 5vlg:D (2.932) BS01 MGR ? GO:0000976 ... E3G817 30190458
    415422 5vlg:E (2.932) BS01 MGR ? GO:0000976 ... E3G817 30190458
    415423 5vlg:F (2.932) BS01 MGR ? GO:0000976 ... E3G817 30190458
    415424 5vlg:G (2.932) BS01 MGR ? GO:0000976 ... E3G817 30190458
    415425 5vlg:H (2.932) BS01 MGR ? GO:0000976 ... E3G817 30190458
    415426 5vlh:A (2.86) BS01 peptide 3.4.21.- GO:0004252 ... Q8NBP7 28825733
    415427 5vlh:A (2.86) BS02 peptide 3.4.21.- GO:0004252 ... Q8NBP7 28825733
    415428 5vlh:A (2.86) BS03 CA 3.4.21.- GO:0004252 ... Q8NBP7 28825733
    415429 5vlk:A (2.2) BS01 peptide 3.4.21.- GO:0004252 ... Q8NBP7 28825733
    415430 5vlk:A (2.2) BS02 peptide 3.4.21.- GO:0004252 ... Q8NBP7 28825733
    415431 5vlk:A (2.2) BS03 CA 3.4.21.- GO:0004252 ... Q8NBP7 28825733
    415432 5vll:A (2.37) BS01 peptide 3.4.21.- GO:0004252 ... Q8NBP7 28825733
    415433 5vll:A (2.37) BS02 peptide 3.4.21.- GO:0004252 ... Q8NBP7 28825733
    415434 5vll:A (2.37) BS03 CA 3.4.21.- GO:0004252 ... Q8NBP7 28825733
    415435 5vlm:A (3.403) BS01 CVI ? GO:0000976 ... E3G817 30190458
    415436 5vlm:B (3.403) BS01 CVI ? GO:0000976 ... E3G817 30190458
    415437 5vlm:C (3.403) BS01 CVI ? GO:0000976 ... E3G817 30190458
    415438 5vlm:D (3.403) BS01 CVI ? GO:0000976 ... E3G817 30190458
    415439 5vlm:E (3.403) BS01 CVI ? GO:0000976 ... E3G817 30190458
    415440 5vlm:F (3.403) BS01 CVI ? GO:0000976 ... E3G817 30190458
    415441 5vlm:G (3.403) BS01 CVI ? GO:0000976 ... E3G817 30190458
    415442 5vlm:H (3.403) BS01 CVI ? GO:0000976 ... E3G817 30190458
    415443 5vlo:A (2.05) BS01 9EJ 2.7.11.17 GO:0004672 ... Q13557 N/A BindingDB: EC50=24.3nM, IC50=0.200nM
    415444 5vlo:B (2.05) BS01 9EJ 2.7.11.17 GO:0004672 ... Q13557 N/A BindingDB: EC50=24.3nM, IC50=0.200nM
    415445 5vlp:A (2.9) BS01 peptide 3.4.21.- GO:0004252 ... Q8NBP7 28825733
    415446 5vlq:A (2.285) BS01 ANP 6.3.2.- GO:0036211 ... B2GUB3 28576883
    415447 5vlq:B (2.285) BS01 ANP 6.3.2.- GO:0036211 ... B2GUB3 28576883
    415448 5vlr:A (2.8) BS01 9EM 2.7.1.137
    2.7.1.153
    GO:0001779 ... O00329 28541707 BindingDB: IC50=3.00nM
    415449 5vlx:A (1.8) BS01 HEM ? GO:0004601 ... Q9NAV7 29170897
    415450 5vlx:B (1.8) BS01 HEM ? GO:0004601 ... Q9NAV7 29170897
    415451 5vm0:A (1.79) BS01 9EG N/A N/A N/A 30033524 MOAD: Kd=1.6nM
    415452 5vm0:B (1.79) BS01 9EG N/A N/A N/A 30033524 MOAD: Kd=1.6nM
    415453 5vm2:A (1.983) BS01 MG 1.-.-.- GO:0008270 ... P77280 N/A
    415454 5vm2:A (1.983) BS02 ZN 1.-.-.- GO:0008270 ... P77280 N/A
    415455 5vm2:B (1.983) BS01 MG 1.-.-.- GO:0008270 ... P77280 N/A
    415456 5vm2:B (1.983) BS02 ZN 1.-.-.- GO:0008270 ... P77280 N/A
    415457 5vm5:A (1.67) BS01 PLS 4.2.1.20 GO:0000162 ... Q8U093 29712420
    415458 5vm5:B (1.67) BS01 PLS 4.2.1.20 GO:0000162 ... Q8U093 29712420
    415459 5vm5:C (1.67) BS01 PLS 4.2.1.20 GO:0000162 ... Q8U093 29712420
    415460 5vm5:D (1.67) BS01 0JO 4.2.1.20 GO:0000162 ... Q8U093 29712420
    415461 5vm6:A (1.5) BS01 9EG N/A N/A N/A 30033524 MOAD: ic50=78nM
    415462 5vm8:B (2.4) BS01 SAM 2.1.1.193 GO:0005737 ... Q5F4Y3 N/A
    415463 5vm9:A (3.28) BS01 rna 3.1.26.n2 GO:0000794 ... Q9H9G7 29040713
    415464 5vm9:C (3.28) BS01 rna 3.1.26.n2 GO:0000794 ... Q9H9G7 29040713
    415465 5vma:A (1.95) BS01 G2I ? GO:0004553 ... A8FDC4 N/A
    415466 5vma:A (1.95) BS02 G2I ? GO:0004553 ... A8FDC4 N/A
    415467 5vma:A (1.95) BS03 9MR ? GO:0004553 ... A8FDC4 N/A
    415468 5vma:A (1.95) BS04 CA ? GO:0004553 ... A8FDC4 N/A
    415469 5vma:A (1.95) BS05 CA ? GO:0004553 ... A8FDC4 N/A
    415470 5vmc:A (2.15) BS01 GAL ? GO:0019031 ... Q9WFX3 29055255
    415471 5vmc:A (2.15) BS02 SIA ? GO:0019031 ... Q9WFX3 29055255
    415472 5vmc:C (2.15) BS01 GAL ? GO:0019031 ... Q9WFX3 29055255
    415473 5vmc:C (2.15) BS02 SIA ? GO:0019031 ... Q9WFX3 29055255
    415474 5vmc:E (2.15) BS01 GAL ? GO:0019031 ... Q9WFX3 29055255
    415475 5vmc:E (2.15) BS02 SIA ? GO:0019031 ... Q9WFX3 29055255
    415476 5vmd:A (2.202) BS01 ZN ? GO:0008270 ... Q86XK2 28691247
    415477 5vmd:A (2.202) BS02 ZN ? GO:0008270 ... Q86XK2 28691247
    415478 5vmd:A (2.202) BS03 ZN ? GO:0008270 ... Q86XK2 28691247
    415479 5vmd:A (2.202) BS04 ZN ? GO:0008270 ... Q86XK2 28691247
    415480 5vmd:A (2.202) BS05 ZN ? GO:0008270 ... Q86XK2 28691247
    415481 5vmd:B (2.202) BS01 ZN ? GO:0008270 ... Q86XK2 28691247
    415482 5vmd:B (2.202) BS02 ZN ? GO:0008270 ... Q86XK2 28691247
    415483 5vmd:B (2.202) BS03 ZN ? GO:0008270 ... Q86XK2 28691247
    415484 5vmd:B (2.202) BS04 ZN ? GO:0008270 ... Q86XK2 28691247
    415485 5vmd:B (2.202) BS05 ZN ? GO:0008270 ... Q86XK2 28691247
    415486 5vmd:C (2.202) BS01 ZN ? GO:0008270 ... Q86XK2 28691247
    415487 5vmd:C (2.202) BS02 ZN ? GO:0008270 ... Q86XK2 28691247
    415488 5vmd:C (2.202) BS03 ZN ? GO:0008270 ... Q86XK2 28691247
    415489 5vmd:C (2.202) BS04 ZN ? GO:0008270 ... Q86XK2 28691247
    415490 5vmd:D (2.202) BS01 ZN ? GO:0008270 ... Q86XK2 28691247
    415491 5vmd:D (2.202) BS02 ZN ? GO:0008270 ... Q86XK2 28691247
    415492 5vmd:D (2.202) BS03 ZN ? GO:0008270 ... Q86XK2 28691247
    415493 5vmd:D (2.202) BS04 ZN ? GO:0008270 ... Q86XK2 28691247
    415494 5vme:A (3.1) BS01 BMA ? N/A Q6MZV7 28758875
    415495 5vme:B (3.1) BS01 BMA ? N/A Q6MZV7 28758875
    415496 5vmf:A (2.35) BS01 GAL ? GO:0019031 ... Q9WFX3 29055255
    415497 5vmf:A (2.35) BS02 SIA ? GO:0019031 ... Q9WFX3 29055255
    415498 5vmf:C (2.35) BS01 GAL ? GO:0019031 ... Q9WFX3 29055255
    415499 5vmf:C (2.35) BS02 SIA ? GO:0019031 ... Q9WFX3 29055255
    415500 5vmf:E (2.35) BS01 GAL ? GO:0019031 ... Q9WFX3 29055255
    415501 5vmf:E (2.35) BS02 SIA ? GO:0019031 ... Q9WFX3 29055255
    415502 5vmg:A (2.45) BS01 SIA ? GO:0019031 ... Q9WFX4 29055255
    415503 5vmg:C (2.45) BS01 SIA ? GO:0019031 ... Q9WFX4 29055255
    415504 5vmg:E (2.45) BS01 SIA ? GO:0019031 ... Q9WFX4 29055255
    415505 5vmj:A (2.95) BS01 SIA ? GO:0019031 ... Q9WFX4 29055255
    415506 5vmj:C (2.95) BS01 SIA ? GO:0019031 ... Q9WFX4 29055255
    415507 5vmj:E (2.95) BS01 SIA ? GO:0019031 ... Q9WFX4 29055255
    415508 5vml:A (1.7) BS01 NAP 1.1.1.36 GO:0000166 ... Q3JRS9 N/A
    415509 5vmm:A (3.6) BS01 HEM ? GO:0004601 ... P69905 29109153
    415510 5vmm:C (3.6) BS01 HEM ? GO:0004601 ... P69905 29109153
    415511 5vmm:E (3.6) BS01 HEM ? N/A Q7A656 29109153
    415512 5vmm:F (3.6) BS01 HEM ? N/A Q7A656 29109153
    415513 5vmo:A (1.7) BS01 peptide ? GO:0042981 ... Q5GAF0 29483196
    415514 5vmp:A (2.48) BS01 ZN 1.14.11.66
    1.14.11.69
    N/A O75164 28835804
    415515 5vmp:A (2.48) BS02 9FJ 1.14.11.66
    1.14.11.69
    N/A O75164 28835804
    415516 5vmp:B (2.48) BS01 ZN 1.14.11.66
    1.14.11.69
    N/A O75164 28835804
    415517 5vmp:B (2.48) BS02 9FJ 1.14.11.66
    1.14.11.69
    N/A O75164 28835804
    415518 5vmp:C (2.48) BS01 ZN 1.14.11.66
    1.14.11.69
    N/A O75164 28835804
    415519 5vmp:C (2.48) BS02 9FJ 1.14.11.66
    1.14.11.69
    N/A O75164 28835804
    415520 5vmp:D (2.48) BS01 ZN 1.14.11.66
    1.14.11.69
    N/A O75164 28835804
    415521 5vmp:D (2.48) BS02 9FJ 1.14.11.66
    1.14.11.69
    N/A O75164 28835804
    415522 5vmq:C (2.012) BS01 CA 2.1.3.2 GO:0004070 ... B7MLQ3 28833948
    415523 5vms:B (3.7) BS01 CA ? GO:0000086 ... P0DP23 28575668
    415524 5vms:B (3.7) BS02 CA ? GO:0000086 ... P0DP23 28575668
    415525 5vms:B (3.7) BS03 CA ? GO:0000086 ... P0DP23 28575668
    415526 5vmt:A (2.5) BS01 NAD 1.2.1.- GO:0000166 ... B4RPP8 31930578
    415527 5vmt:B (2.5) BS01 NAD 1.2.1.- GO:0000166 ... B4RPP8 31930578
    415528 5vmt:C (2.5) BS01 NAD 1.2.1.- GO:0000166 ... B4RPP8 31930578
    415529 5vmt:D (2.5) BS01 NAD 1.2.1.- GO:0000166 ... B4RPP8 31930578
    415530 5vmt:E (2.5) BS01 NAD 1.2.1.- GO:0000166 ... B4RPP8 31930578
    415531 5vmt:F (2.5) BS01 NAD 1.2.1.- GO:0000166 ... B4RPP8 31930578
    415532 5vmt:G (2.5) BS01 NAD 1.2.1.- GO:0000166 ... B4RPP8 31930578
    415533 5vmt:H (2.5) BS01 NAD 1.2.1.- GO:0000166 ... B4RPP8 31930578
    415534 5vmu:A (2.346) BS01 dna ? N/A Q86T24 29546986
    415535 5vmu:A (2.346) BS02 dna ? N/A Q86T24 29546986
    415536 5vmu:A (2.346) BS03 ZN ? N/A Q86T24 29546986
    415537 5vmu:A (2.346) BS04 ZN ? N/A Q86T24 29546986
    415538 5vmu:A (2.346) BS05 ZN ? N/A Q86T24 29546986
    415539 5vmv:A (2.313) BS01 dna ? N/A Q86T24 29546986
    415540 5vmv:A (2.313) BS02 dna ? N/A Q86T24 29546986
    415541 5vmv:A (2.313) BS03 ZN ? N/A Q86T24 29546986
    415542 5vmv:A (2.313) BS04 ZN ? N/A Q86T24 29546986
    415543 5vmv:A (2.313) BS05 ZN ? N/A Q86T24 29546986
    415544 5vmw:A (2.397) BS01 dna ? N/A Q86T24 29546986
    415545 5vmw:A (2.397) BS02 dna ? N/A Q86T24 29546986
    415546 5vmw:A (2.397) BS03 ZN ? N/A Q86T24 29546986
    415547 5vmw:A (2.397) BS04 ZN ? N/A Q86T24 29546986
    415548 5vmw:A (2.397) BS05 ZN ? N/A Q86T24 29546986
    415549 5vmx:A (2.05) BS01 dna ? N/A Q86T24 29546986
    415550 5vmx:A (2.05) BS02 dna ? N/A Q86T24 29546986
    415551 5vmx:A (2.05) BS03 ZN ? N/A Q86T24 29546986
    415552 5vmx:A (2.05) BS04 ZN ? N/A Q86T24 29546986
    415553 5vmx:A (2.05) BS05 ZN ? N/A Q86T24 29546986
    415554 5vmy:A (2.002) BS01 dna ? N/A Q86T24 29546986
    415555 5vmy:A (2.002) BS02 dna ? N/A Q86T24 29546986
    415556 5vmy:A (2.002) BS03 ZN ? N/A Q86T24 29546986
    415557 5vmy:A (2.002) BS04 ZN ? N/A Q86T24 29546986
    415558 5vmy:A (2.002) BS05 ZN ? N/A Q86T24 29546986
    415559 5vmz:A (2.319) BS01 dna ? N/A Q86T24 29546986
    415560 5vmz:A (2.319) BS02 dna ? N/A Q86T24 29546986
    415561 5vmz:A (2.319) BS03 ZN ? N/A Q86T24 29546986
    415562 5vmz:A (2.319) BS04 ZN ? N/A Q86T24 29546986
    415563 5vmz:A (2.319) BS05 ZN ? N/A Q86T24 29546986
    415564 5vn0:A (2.001) BS01 FAD ? GO:0000166 ... Q03Q85 28805804
    415565 5vn0:A (2.001) BS02 NAI ? GO:0000166 ... Q03Q85 28805804
    415566 5vn0:B (2.001) BS01 FAD ? GO:0000166 ... Q03Q85 28805804
    415567 5vn0:B (2.001) BS02 NAI ? GO:0000166 ... Q03Q85 28805804
    415568 5vn0:C (2.001) BS01 FAD ? GO:0000166 ... Q03Q85 28805804
    415569 5vn0:C (2.001) BS02 NAI ? GO:0000166 ... Q03Q85 28805804
    415570 5vn0:D (2.001) BS01 FAD ? GO:0000166 ... Q03Q85 28805804
    415571 5vn0:D (2.001) BS02 NAI ? GO:0000166 ... Q03Q85 28805804
    415572 5vn0:E (2.001) BS01 FAD ? GO:0000166 ... Q03Q85 28805804
    415573 5vn0:E (2.001) BS02 NAI ? GO:0000166 ... Q03Q85 28805804
    415574 5vn0:F (2.001) BS01 FAD ? GO:0000166 ... Q03Q85 28805804
    415575 5vn0:F (2.001) BS02 NAI ? GO:0000166 ... Q03Q85 28805804
    415576 5vn0:G (2.001) BS01 FAD ? GO:0000166 ... Q03Q85 28805804
    415577 5vn0:G (2.001) BS02 NAI ? GO:0000166 ... Q03Q85 28805804
    415578 5vn0:H (2.001) BS01 FAD ? GO:0000166 ... Q03Q85 28805804
    415579 5vn0:H (2.001) BS02 NAI ? GO:0000166 ... Q03Q85 28805804
    415580 5vn1:A (1.25) BS01 ZN 1.1.1.1 GO:0004022 ... P00327 28640600
    415581 5vn1:A (1.25) BS02 ZN 1.1.1.1 GO:0004022 ... P00327 28640600
    415582 5vn1:A (1.25) BS03 NAI 1.1.1.1 GO:0004022 ... P00327 28640600
    415583 5vn1:A (1.25) BS04 NWH 1.1.1.1 GO:0004022 ... P00327 28640600 MOAD: Ki=5.4uM
    415584 5vn1:B (1.25) BS01 ZN 1.1.1.1 GO:0004022 ... P00327 28640600
    415585 5vn1:B (1.25) BS02 ZN 1.1.1.1 GO:0004022 ... P00327 28640600
    415586 5vn1:B (1.25) BS03 NAI 1.1.1.1 GO:0004022 ... P00327 28640600
    415587 5vn1:B (1.25) BS04 NWH 1.1.1.1 GO:0004022 ... P00327 28640600 MOAD: Ki=5.4uM
    415588 5vn1:C (1.25) BS01 ZN 1.1.1.1 GO:0004022 ... P00327 28640600
    415589 5vn1:C (1.25) BS02 ZN 1.1.1.1 GO:0004022 ... P00327 28640600
    415590 5vn1:C (1.25) BS03 NAI 1.1.1.1 GO:0004022 ... P00327 28640600
    415591 5vn1:C (1.25) BS04 NWH 1.1.1.1 GO:0004022 ... P00327 28640600 MOAD: Ki=5.4uM
    415592 5vn1:C (1.25) BS05 NMH 1.1.1.1 GO:0004022 ... P00327 28640600 MOAD: Ki=5.4uM
    415593 5vn1:D (1.25) BS01 ZN 1.1.1.1 GO:0004022 ... P00327 28640600
    415594 5vn1:D (1.25) BS02 ZN 1.1.1.1 GO:0004022 ... P00327 28640600
    415595 5vn1:D (1.25) BS03 NAI 1.1.1.1 GO:0004022 ... P00327 28640600
    415596 5vn1:D (1.25) BS04 NWH 1.1.1.1 GO:0004022 ... P00327 28640600 MOAD: Ki=5.4uM
    415597 5vn2:A (1.9) BS01 NAD 1.1.1.100 GO:0016491 ... Q8YJQ6 N/A
    415598 5vn2:B (1.9) BS01 NAD 1.1.1.100 GO:0016491 ... Q8YJQ6 N/A
    415599 5vn2:C (1.9) BS01 NAD 1.1.1.100 GO:0016491 ... Q8YJQ6 N/A
    415600 5vn2:D (1.9) BS01 NAD 1.1.1.100 GO:0016491 ... Q8YJQ6 N/A

    Reference:
  • Chengxin Zhang, Xi Zhang, Lydia Freddolino, and Yang Zhang. BioLiP2: an updated structure database for biologically relevent ligand-protein interactions, Nucleic Acids Research, gkad630 (2023).
  • Jianyi Yang, Ambrish Roy, and Yang Zhang. BioLiP: a semi-manually curated database for biologically relevant ligand-protein interactions, Nucleic Acids Research, 41: D1096-D1103 (2013) (download the PDF file).