SEQ2FUN

BioLiP
Download all results in tab-seperated text for 942758 receptor-ligand interactions, whose format is explained at readme.txt.
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  • Hover over EC number to view the full name of enzymatic activity.
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    # PDB
    (Resolution Å)
    Site # Ligand EC number GO terms UniProt PubMed Binding
    affinity
    416201 5vpp:QN (3.9) BS01 rna ? GO:0003735 ... P0DOY6 30262649
    416202 5vpp:QO (3.9) BS01 rna ? GO:0003735 ... Q5SJ76 30262649
    416203 5vpp:QO (3.9) BS02 rna ? GO:0003735 ... Q5SJ76 30262649
    416204 5vpp:QP (3.9) BS01 rna ? GO:0003735 ... Q5SJH3 30262649
    416205 5vpp:QQ (3.9) BS01 rna ? GO:0003735 ... P0DOY7 30262649
    416206 5vpp:QR (3.9) BS01 rna ? GO:0003735 ... Q5SLQ0 30262649
    416207 5vpp:QS (3.9) BS01 rna ? GO:0000028 ... Q5SHP2 30262649
    416208 5vpp:QT (3.9) BS01 rna ? GO:0003723 ... P80380 30262649
    416209 5vpp:R0 (3.9) BS01 rna ? GO:0003735 ... P60493 30262649
    416210 5vpp:R0 (3.9) BS02 rna ? GO:0003735 ... P60493 30262649
    416211 5vpp:R1 (3.9) BS01 rna ? GO:0003735 ... P60494 30262649
    416212 5vpp:R1 (3.9) BS02 MG ? GO:0003735 ... P60494 30262649
    416213 5vpp:R1 (3.9) BS03 MG ? GO:0003735 ... P60494 30262649
    416214 5vpp:R2 (3.9) BS01 rna ? GO:0003735 ... Q5SHP6 30262649
    416215 5vpp:R3 (3.9) BS01 rna ? GO:0003735 ... Q5SHQ6 30262649
    416216 5vpp:R3 (3.9) BS02 rna ? GO:0003735 ... Q5SHQ6 30262649
    416217 5vpp:R3 (3.9) BS03 MG ? GO:0003735 ... Q5SHQ6 30262649
    416218 5vpp:R4 (3.9) BS01 rna ? GO:0003735 ... Q5SJE1 30262649
    416219 5vpp:R5 (3.9) BS01 rna ? GO:0003735 ... P80339 30262649
    416220 5vpp:R6 (3.9) BS01 rna ? GO:0000049 ... P35871 30262649
    416221 5vpp:R6 (3.9) BS02 MG ? GO:0000049 ... P35871 30262649
    416222 5vpp:R7 (3.9) BS01 rna ? GO:0003735 ... P80340 30262649
    416223 5vpp:R8 (3.9) BS01 rna ? GO:0003735 ... Q5SKU1 30262649
    416224 5vpp:R8 (3.9) BS02 MG ? GO:0003735 ... Q5SKU1 30262649
    416225 5vpp:R8 (3.9) BS03 MG ? GO:0003735 ... Q5SKU1 30262649
    416226 5vpp:R9 (3.9) BS01 rna ? GO:0003735 ... Q5SHR2 30262649
    416227 5vpp:RD (3.9) BS01 rna ? GO:0002181 ... P60405 30262649
    416228 5vpp:RD (3.9) BS02 rna ? GO:0002181 ... P60405 30262649
    416229 5vpp:RD (3.9) BS03 MG ? GO:0002181 ... P60405 30262649
    416230 5vpp:RD (3.9) BS04 MG ? GO:0002181 ... P60405 30262649
    416231 5vpp:RD (3.9) BS05 MG ? GO:0002181 ... P60405 30262649
    416232 5vpp:RD (3.9) BS06 MG ? GO:0002181 ... P60405 30262649
    416233 5vpp:RD (3.9) BS07 MG ? GO:0002181 ... P60405 30262649
    416234 5vpp:RD (3.9) BS08 MG ? GO:0002181 ... P60405 30262649
    416235 5vpp:RD (3.9) BS09 MG ? GO:0002181 ... P60405 30262649
    416236 5vpp:RE (3.9) BS01 rna ? GO:0003735 ... Q5SHN8 30262649
    416237 5vpp:RE (3.9) BS02 MG ? GO:0003735 ... Q5SHN8 30262649
    416238 5vpp:RE (3.9) BS03 MG ? GO:0003735 ... Q5SHN8 30262649
    416239 5vpp:RE (3.9) BS04 MG ? GO:0003735 ... Q5SHN8 30262649
    416240 5vpp:RE (3.9) BS05 MG ? GO:0003735 ... Q5SHN8 30262649
    416241 5vpp:RF (3.9) BS01 rna ? GO:0003735 ... Q5SHN9 30262649
    416242 5vpp:RF (3.9) BS02 MG ? GO:0003735 ... Q5SHN9 30262649
    416243 5vpp:RF (3.9) BS03 MG ? GO:0003735 ... Q5SHN9 30262649
    416244 5vpp:RF (3.9) BS04 MG ? GO:0003735 ... Q5SHN9 30262649
    416245 5vpp:RG (3.9) BS01 rna ? GO:0000049 ... Q5SHQ0 30262649
    416246 5vpp:RG (3.9) BS02 rna ? GO:0000049 ... Q5SHQ0 30262649
    416247 5vpp:RH (3.9) BS01 rna ? GO:0002181 ... P0DOY8 30262649
    416248 5vpp:RI (3.9) BS01 rna ? GO:0003735 ... Q5SLQ1 30262649
    416249 5vpp:RN (3.9) BS01 rna ? GO:0003729 ... P60488 30262649
    416250 5vpp:RO (3.9) BS01 rna ? GO:0003735 ... Q5SHP8 30262649
    416251 5vpp:RO (3.9) BS02 rna ? GO:0003735 ... Q5SHP8 30262649
    416252 5vpp:RP (3.9) BS01 rna ? GO:0003735 ... Q5SHQ7 30262649
    416253 5vpp:RQ (3.9) BS01 rna ? GO:0000049 ... P60489 30262649
    416254 5vpp:RQ (3.9) BS02 rna ? GO:0000049 ... P60489 30262649
    416255 5vpp:RQ (3.9) BS03 MG ? GO:0000049 ... P60489 30262649
    416256 5vpp:RQ (3.9) BS04 MG ? GO:0000049 ... P60489 30262649
    416257 5vpp:RR (3.9) BS01 rna ? GO:0003735 ... Q9Z9H5 30262649
    416258 5vpp:RS (3.9) BS01 rna ? GO:0003735 ... Q5SHQ4 30262649
    416259 5vpp:RS (3.9) BS02 rna ? GO:0003735 ... Q5SHQ4 30262649
    416260 5vpp:RT (3.9) BS01 rna ? GO:0003735 ... P60490 30262649
    416261 5vpp:RT (3.9) BS02 rna ? GO:0003735 ... P60490 30262649
    416262 5vpp:RT (3.9) BS03 MG ? GO:0003735 ... P60490 30262649
    416263 5vpp:RU (3.9) BS01 rna ? GO:0000027 ... P60491 30262649
    416264 5vpp:RU (3.9) BS02 MG ? GO:0000027 ... P60491 30262649
    416265 5vpp:RV (3.9) BS01 rna ? GO:0003723 ... P60492 30262649
    416266 5vpp:RW (3.9) BS01 rna ? GO:0003735 ... Q5SHP3 30262649
    416267 5vpp:RX (3.9) BS01 rna ? GO:0003735 ... Q5SHP0 30262649
    416268 5vpp:RY (3.9) BS01 rna ? GO:0003723 ... Q5SHP9 30262649
    416269 5vpp:RY (3.9) BS02 MG ? GO:0003723 ... Q5SHP9 30262649
    416270 5vpp:RY (3.9) BS03 MG ? GO:0003723 ... Q5SHP9 30262649
    416271 5vpp:RZ (3.9) BS01 rna ? GO:0003723 ... Q5SHZ1 30262649
    416272 5vpp:RZ (3.9) BS02 rna ? GO:0003723 ... Q5SHZ1 30262649
    416273 5vpp:XB (3.9) BS01 rna ? GO:0003735 ... P80371 30262649
    416274 5vpp:XC (3.9) BS01 rna ? GO:0003676 ... P80372 30262649
    416275 5vpp:XC (3.9) BS02 MG ? GO:0003676 ... P80372 30262649
    416276 5vpp:XD (3.9) BS01 rna ? GO:0003723 ... P80373 30262649
    416277 5vpp:XD (3.9) BS02 ZN ? GO:0003723 ... P80373 30262649
    416278 5vpp:XD (3.9) BS03 MG ? GO:0003723 ... P80373 30262649
    416279 5vpp:XE (3.9) BS01 rna ? GO:0003723 ... Q5SHQ5 30262649
    416280 5vpp:XF (3.9) BS01 rna ? GO:0003735 ... Q5SLP8 30262649
    416281 5vpp:XG (3.9) BS01 rna ? GO:0000049 ... P17291 30262649
    416282 5vpp:XH (3.9) BS01 rna ? GO:0003735 ... P0DOY9 30262649
    416283 5vpp:XI (3.9) BS01 rna ? GO:0000049 ... P80374 30262649
    416284 5vpp:XJ (3.9) BS01 rna ? GO:0000049 ... Q5SHN7 30262649
    416285 5vpp:XK (3.9) BS01 rna ? GO:0003735 ... P80376 30262649
    416286 5vpp:XK (3.9) BS02 rna ? GO:0003735 ... P80376 30262649
    416287 5vpp:XL (3.9) BS01 rna ? GO:0000049 ... Q5SHN3 30262649
    416288 5vpp:XL (3.9) BS02 MG ? GO:0000049 ... Q5SHN3 30262649
    416289 5vpp:XM (3.9) BS01 rna ? GO:0000049 ... P80377 30262649
    416290 5vpp:XM (3.9) BS02 MG ? GO:0000049 ... P80377 30262649
    416291 5vpp:XN (3.9) BS01 rna ? GO:0003735 ... P0DOY6 30262649
    416292 5vpp:XO (3.9) BS01 rna ? GO:0003735 ... Q5SJ76 30262649
    416293 5vpp:XO (3.9) BS02 rna ? GO:0003735 ... Q5SJ76 30262649
    416294 5vpp:XP (3.9) BS01 rna ? GO:0003735 ... Q5SJH3 30262649
    416295 5vpp:XP (3.9) BS02 MG ? GO:0003735 ... Q5SJH3 30262649
    416296 5vpp:XQ (3.9) BS01 rna ? GO:0003735 ... P0DOY7 30262649
    416297 5vpp:XR (3.9) BS01 rna ? GO:0003735 ... Q5SLQ0 30262649
    416298 5vpp:XS (3.9) BS01 rna ? GO:0000028 ... Q5SHP2 30262649
    416299 5vpp:XT (3.9) BS01 rna ? GO:0003723 ... P80380 30262649
    416300 5vpp:Y0 (3.9) BS01 rna ? GO:0003735 ... P60493 30262649
    416301 5vpp:Y0 (3.9) BS02 rna ? GO:0003735 ... P60493 30262649
    416302 5vpp:Y1 (3.9) BS01 rna ? GO:0003735 ... P60494 30262649
    416303 5vpp:Y1 (3.9) BS02 MG ? GO:0003735 ... P60494 30262649
    416304 5vpp:Y2 (3.9) BS01 rna ? GO:0003735 ... Q5SHP6 30262649
    416305 5vpp:Y3 (3.9) BS01 rna ? GO:0003735 ... Q5SHQ6 30262649
    416306 5vpp:Y3 (3.9) BS02 rna ? GO:0003735 ... Q5SHQ6 30262649
    416307 5vpp:Y4 (3.9) BS01 rna ? GO:0003735 ... Q5SJE1 30262649
    416308 5vpp:Y5 (3.9) BS01 rna ? GO:0003735 ... P80339 30262649
    416309 5vpp:Y6 (3.9) BS01 rna ? GO:0000049 ... P35871 30262649
    416310 5vpp:Y7 (3.9) BS01 rna ? GO:0003735 ... P80340 30262649
    416311 5vpp:Y8 (3.9) BS01 rna ? GO:0003735 ... Q5SKU1 30262649
    416312 5vpp:Y8 (3.9) BS02 MG ? GO:0003735 ... Q5SKU1 30262649
    416313 5vpp:Y9 (3.9) BS01 rna ? GO:0003735 ... Q5SHR2 30262649
    416314 5vpp:Y9 (3.9) BS02 ZN ? GO:0003735 ... Q5SHR2 30262649
    416315 5vpp:YD (3.9) BS01 rna ? GO:0002181 ... P60405 30262649
    416316 5vpp:YD (3.9) BS02 rna ? GO:0002181 ... P60405 30262649
    416317 5vpp:YD (3.9) BS03 MG ? GO:0002181 ... P60405 30262649
    416318 5vpp:YD (3.9) BS04 MG ? GO:0002181 ... P60405 30262649
    416319 5vpp:YE (3.9) BS01 rna ? GO:0003735 ... Q5SHN8 30262649
    416320 5vpp:YE (3.9) BS02 MG ? GO:0003735 ... Q5SHN8 30262649
    416321 5vpp:YE (3.9) BS03 MG ? GO:0003735 ... Q5SHN8 30262649
    416322 5vpp:YF (3.9) BS01 rna ? GO:0003735 ... Q5SHN9 30262649
    416323 5vpp:YG (3.9) BS01 rna ? GO:0000049 ... Q5SHQ0 30262649
    416324 5vpp:YG (3.9) BS02 rna ? GO:0000049 ... Q5SHQ0 30262649
    416325 5vpp:YH (3.9) BS01 rna ? GO:0002181 ... P0DOY8 30262649
    416326 5vpp:YI (3.9) BS01 rna ? GO:0003735 ... Q5SLQ1 30262649
    416327 5vpp:YI (3.9) BS02 rna ? GO:0003735 ... Q5SLQ1 30262649
    416328 5vpp:YN (3.9) BS01 rna ? GO:0003729 ... P60488 30262649
    416329 5vpp:YO (3.9) BS01 rna ? GO:0003735 ... Q5SHP8 30262649
    416330 5vpp:YO (3.9) BS02 rna ? GO:0003735 ... Q5SHP8 30262649
    416331 5vpp:YP (3.9) BS01 rna ? GO:0003735 ... Q5SHQ7 30262649
    416332 5vpp:YQ (3.9) BS01 rna ? GO:0000049 ... P60489 30262649
    416333 5vpp:YQ (3.9) BS02 rna ? GO:0000049 ... P60489 30262649
    416334 5vpp:YQ (3.9) BS03 MG ? GO:0000049 ... P60489 30262649
    416335 5vpp:YR (3.9) BS01 rna ? GO:0003735 ... Q9Z9H5 30262649
    416336 5vpp:YR (3.9) BS02 MG ? GO:0003735 ... Q9Z9H5 30262649
    416337 5vpp:YS (3.9) BS01 rna ? GO:0003735 ... Q5SHQ4 30262649
    416338 5vpp:YS (3.9) BS02 rna ? GO:0003735 ... Q5SHQ4 30262649
    416339 5vpp:YT (3.9) BS01 rna ? GO:0003735 ... P60490 30262649
    416340 5vpp:YT (3.9) BS02 rna ? GO:0003735 ... P60490 30262649
    416341 5vpp:YT (3.9) BS03 MG ? GO:0003735 ... P60490 30262649
    416342 5vpp:YT (3.9) BS04 MG ? GO:0003735 ... P60490 30262649
    416343 5vpp:YU (3.9) BS01 rna ? GO:0000027 ... P60491 30262649
    416344 5vpp:YV (3.9) BS01 rna ? GO:0003723 ... P60492 30262649
    416345 5vpp:YW (3.9) BS01 rna ? GO:0003735 ... Q5SHP3 30262649
    416346 5vpp:YX (3.9) BS01 rna ? GO:0003735 ... Q5SHP0 30262649
    416347 5vpp:YY (3.9) BS01 rna ? GO:0003723 ... Q5SHP9 30262649
    416348 5vpp:YY (3.9) BS02 MG ? GO:0003723 ... Q5SHP9 30262649
    416349 5vpp:YZ (3.9) BS01 rna ? GO:0003723 ... Q5SHZ1 30262649
    416350 5vps:A (1.45) BS01 9G1 ? N/A B1YU47 32841567
    416351 5vpt:A (2.1) BS01 MN 3.1.-.- GO:0003723 ... C3W5S0 29691337
    416352 5vpt:A (2.1) BS02 MN 3.1.-.- GO:0003723 ... C3W5S0 29691337
    416353 5vpt:A (2.1) BS03 R07 3.1.-.- GO:0003723 ... C3W5S0 29691337 MOAD: Kd=9.5nM
    416354 5vpu:A (1.5) BS01 MN 5.4.2.12 GO:0003824 ... A0A059ZPG7 N/A
    416355 5vpu:A (1.5) BS02 MN 5.4.2.12 GO:0003824 ... A0A059ZPG7 N/A
    416356 5vpw:A (1.85) BS01 ICS 1.18.6.1 GO:0005524 ... P00467 28692802
    416357 5vpw:A (1.85) BS02 CLF 1.18.6.1 GO:0005524 ... P00467 28692802
    416358 5vpw:B (1.85) BS01 CLF 1.18.6.1 GO:0005524 ... P11347 28692802
    416359 5vpw:B (1.85) BS02 FE2 1.18.6.1 GO:0005524 ... P11347 28692802
    416360 5vpw:B (1.85) BS03 FE2 1.18.6.1 GO:0005524 ... P11347 28692802
    416361 5vpw:C (1.85) BS01 ICS 1.18.6.1 GO:0005524 ... P00467 28692802
    416362 5vpw:C (1.85) BS02 CLF 1.18.6.1 GO:0005524 ... P00467 28692802
    416363 5vpw:D (1.85) BS01 FE2 1.18.6.1 GO:0005524 ... P11347 28692802
    416364 5vpw:D (1.85) BS02 FE2 1.18.6.1 GO:0005524 ... P11347 28692802
    416365 5vpw:D (1.85) BS03 CLF 1.18.6.1 GO:0005524 ... P11347 28692802
    416366 5vpx:A (2.303) BS01 MN 3.1.-.- GO:0003723 ... C3W5S0 29691337
    416367 5vpx:A (2.303) BS02 MN 3.1.-.- GO:0003723 ... C3W5S0 29691337
    416368 5vpx:A (2.303) BS03 R07 3.1.-.- GO:0003723 ... C3W5S0 29691337 MOAD: Kd=4.6uM
    416369 5vpy:A (2.0) BS01 MG 3.6.5.2 GO:0003924 ... P01116 29199977
    416370 5vpy:A (2.0) BS02 9GM 3.6.5.2 GO:0003924 ... P01116 29199977
    416371 5vpy:B (2.0) BS01 MG 3.6.5.2 GO:0003924 ... P01116 29199977
    416372 5vpy:B (2.0) BS02 9GM 3.6.5.2 GO:0003924 ... P01116 29199977
    416373 5vpz:A (1.85) BS01 GSP 3.6.5.2 GO:0003924 ... P01116 29199977
    416374 5vpz:B (1.85) BS01 GSP 3.6.5.2 GO:0003924 ... P01116 29199977
    416375 5vq0:A (2.3) BS01 GDP 3.6.5.2 GO:0003924 ... P01116 29199977
    416376 5vq0:B (2.3) BS01 GDP 3.6.5.2 GO:0003924 ... P01116 29199977
    416377 5vq1:A (1.78) BS01 GDP 3.6.5.2 GO:0003924 ... P01116 29199977
    416378 5vq1:B (1.78) BS01 GDP 3.6.5.2 GO:0003924 ... P01116 29199977
    416379 5vq2:A (1.96) BS01 GTP 3.6.5.2 GO:0003924 ... P01116 29199977
    416380 5vq2:A (1.96) BS02 MG 3.6.5.2 GO:0003924 ... P01116 29199977
    416381 5vq2:B (1.96) BS01 GTP 3.6.5.2 GO:0003924 ... P01116 29199977
    416382 5vq2:B (1.96) BS02 MG 3.6.5.2 GO:0003924 ... P01116 29199977
    416383 5vq3:A (1.72) BS01 ICS 1.18.6.1 GO:0005524 ... P00467 28692802
    416384 5vq3:A (1.72) BS02 CLF 1.18.6.1 GO:0005524 ... P00467 28692802
    416385 5vq3:B (1.72) BS01 CLF 1.18.6.1 GO:0005524 ... P11347 28692802
    416386 5vq3:B (1.72) BS02 FE2 1.18.6.1 GO:0005524 ... P11347 28692802
    416387 5vq3:B (1.72) BS03 FE2 1.18.6.1 GO:0005524 ... P11347 28692802
    416388 5vq3:C (1.72) BS01 ICS 1.18.6.1 GO:0005524 ... P00467 28692802
    416389 5vq3:C (1.72) BS02 CLF 1.18.6.1 GO:0005524 ... P00467 28692802
    416390 5vq3:D (1.72) BS01 FE2 1.18.6.1 GO:0005524 ... P11347 28692802
    416391 5vq3:D (1.72) BS02 FE2 1.18.6.1 GO:0005524 ... P11347 28692802
    416392 5vq3:D (1.72) BS03 CLF 1.18.6.1 GO:0005524 ... P11347 28692802
    416393 5vq4:A (2.3) BS01 ICS 1.18.6.1 GO:0005524 ... P07328 28692802
    416394 5vq4:A (2.3) BS02 CLF 1.18.6.1 GO:0005524 ... P07328 28692802
    416395 5vq4:B (2.3) BS01 CLF 1.18.6.1 GO:0005524 ... P07329 28692802
    416396 5vq4:B (2.3) BS02 FE 1.18.6.1 GO:0005524 ... P07329 28692802
    416397 5vq4:B (2.3) BS03 FE 1.18.6.1 GO:0005524 ... P07329 28692802
    416398 5vq4:C (2.3) BS01 ICS 1.18.6.1 GO:0005524 ... P07328 28692802
    416399 5vq4:C (2.3) BS02 CLF 1.18.6.1 GO:0005524 ... P07328 28692802
    416400 5vq4:D (2.3) BS01 FE 1.18.6.1 GO:0005524 ... P07329 28692802

    Reference:
  • Chengxin Zhang, Xi Zhang, Lydia Freddolino, and Yang Zhang. BioLiP2: an updated structure database for biologically relevent ligand-protein interactions, Nucleic Acids Research, gkad630 (2023).
  • Jianyi Yang, Ambrish Roy, and Yang Zhang. BioLiP: a semi-manually curated database for biologically relevant ligand-protein interactions, Nucleic Acids Research, 41: D1096-D1103 (2013) (download the PDF file).