SEQ2FUN

BioLiP
Download all results in tab-seperated text for 942758 receptor-ligand interactions, whose format is explained at readme.txt.
  • Hover over PDB to view the title of the structure. Click PDB to view the structure at the RCSB PDB database. Resolution -1.00 means the resolution is unavailable, e.g., for NMR structures.
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  • Hover over Ligand to view the full ligand name. Click Ligand to view the 2D diagram and other detail information of the ligand.
  • Hover over EC number to view the full name of enzymatic activity.
  • Hover over GO terms to view all GO terms.
  • Hover over UniProt to view the protein name.
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    # PDB
    (Resolution Å)
    Site # Ligand EC number GO terms UniProt PubMed Binding
    affinity
    417401 5vy8:C (5.6) BS02 ADP ? GO:0005515 ... P31539 28619716
    417402 5vy8:D (5.6) BS01 ADP ? GO:0005515 ... P31539 28619716
    417403 5vy8:D (5.6) BS02 ADP ? GO:0005515 ... P31539 28619716
    417404 5vy8:E (5.6) BS01 ADP ? GO:0005515 ... P31539 28619716
    417405 5vy8:E (5.6) BS02 ADP ? GO:0005515 ... P31539 28619716
    417406 5vy8:F (5.6) BS01 ADP ? GO:0005515 ... P31539 28619716
    417407 5vy8:F (5.6) BS02 ADP ? GO:0005515 ... P31539 28619716
    417408 5vy9:A (6.7) BS01 peptide ? GO:0005515 ... P31539 28619716
    417409 5vy9:A (6.7) BS02 AGS ? GO:0005515 ... P31539 28619716
    417410 5vy9:A (6.7) BS03 AGS ? GO:0005515 ... P31539 28619716
    417411 5vy9:B (6.7) BS01 peptide ? GO:0005515 ... P31539 28619716
    417412 5vy9:B (6.7) BS02 AGS ? GO:0005515 ... P31539 28619716
    417413 5vy9:B (6.7) BS03 AGS ? GO:0005515 ... P31539 28619716
    417414 5vy9:C (6.7) BS01 peptide ? GO:0005515 ... P31539 28619716
    417415 5vy9:C (6.7) BS02 AGS ? GO:0005515 ... P31539 28619716
    417416 5vy9:C (6.7) BS03 AGS ? GO:0005515 ... P31539 28619716
    417417 5vy9:D (6.7) BS01 peptide ? GO:0005515 ... P31539 28619716
    417418 5vy9:D (6.7) BS02 AGS ? GO:0005515 ... P31539 28619716
    417419 5vy9:D (6.7) BS03 AGS ? GO:0005515 ... P31539 28619716
    417420 5vy9:E (6.7) BS01 peptide ? GO:0005515 ... P31539 28619716
    417421 5vy9:E (6.7) BS02 AGS ? GO:0005515 ... P31539 28619716
    417422 5vy9:E (6.7) BS03 AGS ? GO:0005515 ... P31539 28619716
    417423 5vy9:F (6.7) BS01 AGS ? GO:0005515 ... P31539 28619716
    417424 5vy9:F (6.7) BS02 AGS ? GO:0005515 ... P31539 28619716
    417425 5vy9:F (6.7) BS03 AGS ? GO:0005515 ... P31539 28619716
    417426 5vya:A (4.0) BS01 peptide ? GO:0005515 ... P31539 28619716
    417427 5vya:A (4.0) BS02 AGS ? GO:0005515 ... P31539 28619716
    417428 5vya:A (4.0) BS03 AGS ? GO:0005515 ... P31539 28619716
    417429 5vya:A (4.0) BS04 AGS ? GO:0005515 ... P31539 28619716
    417430 5vya:B (4.0) BS01 peptide ? GO:0005515 ... P31539 28619716
    417431 5vya:B (4.0) BS02 AGS ? GO:0005515 ... P31539 28619716
    417432 5vya:B (4.0) BS03 AGS ? GO:0005515 ... P31539 28619716
    417433 5vya:C (4.0) BS01 peptide ? GO:0005515 ... P31539 28619716
    417434 5vya:C (4.0) BS02 AGS ? GO:0005515 ... P31539 28619716
    417435 5vya:C (4.0) BS03 AGS ? GO:0005515 ... P31539 28619716
    417436 5vya:C (4.0) BS04 AGS ? GO:0005515 ... P31539 28619716
    417437 5vya:D (4.0) BS01 peptide ? GO:0005515 ... P31539 28619716
    417438 5vya:D (4.0) BS02 AGS ? GO:0005515 ... P31539 28619716
    417439 5vya:D (4.0) BS03 AGS ? GO:0005515 ... P31539 28619716
    417440 5vya:D (4.0) BS04 AGS ? GO:0005515 ... P31539 28619716
    417441 5vya:E (4.0) BS01 peptide ? GO:0005515 ... P31539 28619716
    417442 5vya:E (4.0) BS02 AGS ? GO:0005515 ... P31539 28619716
    417443 5vya:E (4.0) BS03 AGS ? GO:0005515 ... P31539 28619716
    417444 5vya:E (4.0) BS04 AGS ? GO:0005515 ... P31539 28619716
    417445 5vya:F (4.0) BS01 peptide ? GO:0005515 ... P31539 28619716
    417446 5vya:F (4.0) BS02 AGS ? GO:0005515 ... P31539 28619716
    417447 5vya:F (4.0) BS03 AGS ? GO:0005515 ... P31539 28619716
    417448 5vyb:A (2.4) BS01 MAN ? N/A Q6EIG7 28652405
    417449 5vyb:A (2.4) BS02 CA ? N/A Q6EIG7 28652405
    417450 5vyb:A (2.4) BS03 CA ? N/A Q6EIG7 28652405
    417451 5vyc:A1 (6.0) BS01 rna ? GO:0000028 ... P08865 28723557
    417452 5vyc:A2 (6.0) BS01 rna ? GO:0000028 ... P08865 28723557
    417453 5vyc:A3 (6.0) BS01 rna ? GO:0000028 ... P08865 28723557
    417454 5vyc:A4 (6.0) BS01 rna ? GO:0000028 ... P08865 28723557
    417455 5vyc:A5 (6.0) BS01 rna ? GO:0000028 ... P08865 28723557
    417456 5vyc:A6 (6.0) BS01 rna ? GO:0000028 ... P08865 28723557
    417457 5vyc:B1 (6.0) BS01 rna ? GO:0002181 ... P61247 28723557
    417458 5vyc:B2 (6.0) BS01 rna ? GO:0002181 ... P61247 28723557
    417459 5vyc:B3 (6.0) BS01 rna ? GO:0002181 ... P61247 28723557
    417460 5vyc:B4 (6.0) BS01 rna ? GO:0002181 ... P61247 28723557
    417461 5vyc:B5 (6.0) BS01 rna ? GO:0002181 ... P61247 28723557
    417462 5vyc:B6 (6.0) BS01 rna ? GO:0002181 ... P61247 28723557
    417463 5vyc:C1 (6.0) BS01 rna ? GO:0002181 ... P15880 28723557
    417464 5vyc:C2 (6.0) BS01 rna ? GO:0002181 ... P15880 28723557
    417465 5vyc:C3 (6.0) BS01 rna ? GO:0002181 ... P15880 28723557
    417466 5vyc:C4 (6.0) BS01 rna ? GO:0002181 ... P15880 28723557
    417467 5vyc:C5 (6.0) BS01 rna ? GO:0002181 ... P15880 28723557
    417468 5vyc:C6 (6.0) BS01 rna ? GO:0002181 ... P15880 28723557
    417469 5vyc:D1 (6.0) BS01 rna 4.2.99.18 GO:0000977 ... P23396 28723557
    417470 5vyc:D2 (6.0) BS01 rna 4.2.99.18 GO:0000977 ... P23396 28723557
    417471 5vyc:D3 (6.0) BS01 rna 4.2.99.18 GO:0000977 ... P23396 28723557
    417472 5vyc:D4 (6.0) BS01 rna 4.2.99.18 GO:0000977 ... P23396 28723557
    417473 5vyc:D5 (6.0) BS01 rna 4.2.99.18 GO:0000977 ... P23396 28723557
    417474 5vyc:D6 (6.0) BS01 rna 4.2.99.18 GO:0000977 ... P23396 28723557
    417475 5vyc:E1 (6.0) BS01 rna ? GO:0002181 ... P62701 28723557
    417476 5vyc:E2 (6.0) BS01 rna ? GO:0002181 ... P62701 28723557
    417477 5vyc:E3 (6.0) BS01 rna ? GO:0002181 ... P62701 28723557
    417478 5vyc:E4 (6.0) BS01 rna ? GO:0002181 ... P62701 28723557
    417479 5vyc:E5 (6.0) BS01 rna ? GO:0002181 ... P62701 28723557
    417480 5vyc:E6 (6.0) BS01 rna ? GO:0002181 ... P62701 28723557
    417481 5vyc:F1 (6.0) BS01 rna ? GO:0000028 ... P46782 28723557
    417482 5vyc:F2 (6.0) BS01 rna ? GO:0000028 ... P46782 28723557
    417483 5vyc:F3 (6.0) BS01 rna ? GO:0000028 ... P46782 28723557
    417484 5vyc:F3 (6.0) BS02 rna ? GO:0000028 ... P46782 28723557
    417485 5vyc:F4 (6.0) BS01 rna ? GO:0000028 ... P46782 28723557
    417486 5vyc:F4 (6.0) BS02 rna ? GO:0000028 ... P46782 28723557
    417487 5vyc:F5 (6.0) BS01 rna ? GO:0000028 ... P46782 28723557
    417488 5vyc:F5 (6.0) BS02 rna ? GO:0000028 ... P46782 28723557
    417489 5vyc:F6 (6.0) BS01 rna ? GO:0000028 ... P46782 28723557
    417490 5vyc:G1 (6.0) BS01 rna ? GO:0000082 ... P62753 28723557
    417491 5vyc:G2 (6.0) BS01 rna ? GO:0000082 ... P62753 28723557
    417492 5vyc:G3 (6.0) BS01 rna ? GO:0000082 ... P62753 28723557
    417493 5vyc:G4 (6.0) BS01 rna ? GO:0000082 ... P62753 28723557
    417494 5vyc:G5 (6.0) BS01 rna ? GO:0000082 ... P62753 28723557
    417495 5vyc:G6 (6.0) BS01 rna ? GO:0000082 ... P62753 28723557
    417496 5vyc:H1 (6.0) BS01 rna ? GO:0001843 ... P62081 28723557
    417497 5vyc:H2 (6.0) BS01 rna ? GO:0001843 ... P62081 28723557
    417498 5vyc:H3 (6.0) BS01 rna ? GO:0001843 ... P62081 28723557
    417499 5vyc:H4 (6.0) BS01 rna ? GO:0001843 ... P62081 28723557
    417500 5vyc:H5 (6.0) BS01 rna ? GO:0001843 ... P62081 28723557
    417501 5vyc:H6 (6.0) BS01 rna ? GO:0001843 ... P62081 28723557
    417502 5vyc:I1 (6.0) BS01 rna ? GO:0000462 ... P62241 28723557
    417503 5vyc:I1 (6.0) BS02 rna ? GO:0000462 ... P62241 28723557
    417504 5vyc:I2 (6.0) BS01 rna ? GO:0000462 ... P62241 28723557
    417505 5vyc:I2 (6.0) BS02 rna ? GO:0000462 ... P62241 28723557
    417506 5vyc:I3 (6.0) BS01 rna ? GO:0000462 ... P62241 28723557
    417507 5vyc:I3 (6.0) BS02 rna ? GO:0000462 ... P62241 28723557
    417508 5vyc:I4 (6.0) BS01 rna ? GO:0000462 ... P62241 28723557
    417509 5vyc:I4 (6.0) BS02 rna ? GO:0000462 ... P62241 28723557
    417510 5vyc:I5 (6.0) BS01 rna ? GO:0000462 ... P62241 28723557
    417511 5vyc:I5 (6.0) BS02 rna ? GO:0000462 ... P62241 28723557
    417512 5vyc:I6 (6.0) BS01 rna ? GO:0000462 ... P62241 28723557
    417513 5vyc:I6 (6.0) BS02 rna ? GO:0000462 ... P62241 28723557
    417514 5vyc:J1 (6.0) BS01 rna ? GO:0002181 ... P46781 28723557
    417515 5vyc:J2 (6.0) BS01 rna ? GO:0002181 ... P46781 28723557
    417516 5vyc:J3 (6.0) BS01 rna ? GO:0002181 ... P46781 28723557
    417517 5vyc:J4 (6.0) BS01 rna ? GO:0002181 ... P46781 28723557
    417518 5vyc:J5 (6.0) BS01 rna ? GO:0002181 ... P46781 28723557
    417519 5vyc:J6 (6.0) BS01 rna ? GO:0002181 ... P46781 28723557
    417520 5vyc:K1 (6.0) BS01 rna ? GO:0002181 ... P46783 28723557
    417521 5vyc:K2 (6.0) BS01 rna ? GO:0002181 ... P46783 28723557
    417522 5vyc:K3 (6.0) BS01 rna ? GO:0002181 ... P46783 28723557
    417523 5vyc:K4 (6.0) BS01 rna ? GO:0002181 ... P46783 28723557
    417524 5vyc:K5 (6.0) BS01 rna ? GO:0002181 ... P46783 28723557
    417525 5vyc:K6 (6.0) BS01 rna ? GO:0002181 ... P46783 28723557
    417526 5vyc:L1 (6.0) BS01 rna ? GO:0002181 ... P62280 28723557
    417527 5vyc:L2 (6.0) BS01 rna ? GO:0002181 ... P62280 28723557
    417528 5vyc:L3 (6.0) BS01 rna ? GO:0002181 ... P62280 28723557
    417529 5vyc:L4 (6.0) BS01 rna ? GO:0002181 ... P62280 28723557
    417530 5vyc:L5 (6.0) BS01 rna ? GO:0002181 ... P62280 28723557
    417531 5vyc:L6 (6.0) BS01 rna ? GO:0002181 ... P62280 28723557
    417532 5vyc:M1 (6.0) BS01 rna ? GO:0002181 ... P25398 28723557
    417533 5vyc:M2 (6.0) BS01 rna ? GO:0002181 ... P25398 28723557
    417534 5vyc:M3 (6.0) BS01 rna ? GO:0002181 ... P25398 28723557
    417535 5vyc:M4 (6.0) BS01 rna ? GO:0002181 ... P25398 28723557
    417536 5vyc:M5 (6.0) BS01 rna ? GO:0002181 ... P25398 28723557
    417537 5vyc:M6 (6.0) BS01 rna ? GO:0002181 ... P25398 28723557
    417538 5vyc:N1 (6.0) BS01 rna ? GO:0002181 ... P62277 28723557
    417539 5vyc:N2 (6.0) BS01 rna ? GO:0002181 ... P62277 28723557
    417540 5vyc:N3 (6.0) BS01 rna ? GO:0002181 ... P62277 28723557
    417541 5vyc:N4 (6.0) BS01 rna ? GO:0002181 ... P62277 28723557
    417542 5vyc:N5 (6.0) BS01 rna ? GO:0002181 ... P62277 28723557
    417543 5vyc:N6 (6.0) BS01 rna ? GO:0002181 ... P62277 28723557
    417544 5vyc:O1 (6.0) BS01 rna ? GO:0000028 ... P62263 28723557
    417545 5vyc:O2 (6.0) BS01 rna ? GO:0000028 ... P62263 28723557
    417546 5vyc:O3 (6.0) BS01 rna ? GO:0000028 ... P62263 28723557
    417547 5vyc:O4 (6.0) BS01 rna ? GO:0000028 ... P62263 28723557
    417548 5vyc:O5 (6.0) BS01 rna ? GO:0000028 ... P62263 28723557
    417549 5vyc:O6 (6.0) BS01 rna ? GO:0000028 ... P62263 28723557
    417550 5vyc:P1 (6.0) BS01 rna ? GO:0000028 ... P62841 28723557
    417551 5vyc:P2 (6.0) BS01 rna ? GO:0000028 ... P62841 28723557
    417552 5vyc:P3 (6.0) BS01 rna ? GO:0000028 ... P62841 28723557
    417553 5vyc:P3 (6.0) BS02 rna ? GO:0000028 ... P62841 28723557
    417554 5vyc:P4 (6.0) BS01 rna ? GO:0000028 ... P62841 28723557
    417555 5vyc:P4 (6.0) BS02 rna ? GO:0000028 ... P62841 28723557
    417556 5vyc:P5 (6.0) BS01 rna ? GO:0000028 ... P62841 28723557
    417557 5vyc:P5 (6.0) BS02 rna ? GO:0000028 ... P62841 28723557
    417558 5vyc:P6 (6.0) BS01 rna ? GO:0000028 ... P62841 28723557
    417559 5vyc:P6 (6.0) BS02 rna ? GO:0000028 ... P62841 28723557
    417560 5vyc:Q1 (6.0) BS01 rna ? GO:0000462 ... P62249 28723557
    417561 5vyc:Q2 (6.0) BS01 rna ? GO:0000462 ... P62249 28723557
    417562 5vyc:Q3 (6.0) BS01 rna ? GO:0000462 ... P62249 28723557
    417563 5vyc:Q4 (6.0) BS01 rna ? GO:0000462 ... P62249 28723557
    417564 5vyc:Q5 (6.0) BS01 rna ? GO:0000462 ... P62249 28723557
    417565 5vyc:Q6 (6.0) BS01 rna ? GO:0000462 ... P62249 28723557
    417566 5vyc:R1 (6.0) BS01 rna ? GO:0002181 ... P08708 28723557
    417567 5vyc:R2 (6.0) BS01 rna ? GO:0002181 ... P08708 28723557
    417568 5vyc:R3 (6.0) BS01 rna ? GO:0002181 ... P08708 28723557
    417569 5vyc:R4 (6.0) BS01 rna ? GO:0002181 ... P08708 28723557
    417570 5vyc:R5 (6.0) BS01 rna ? GO:0002181 ... P08708 28723557
    417571 5vyc:R6 (6.0) BS01 rna ? GO:0002181 ... P08708 28723557
    417572 5vyc:S1 (6.0) BS01 rna ? GO:0002181 ... P62269 28723557
    417573 5vyc:S1 (6.0) BS02 rna ? GO:0002181 ... P62269 28723557
    417574 5vyc:S2 (6.0) BS01 rna ? GO:0002181 ... P62269 28723557
    417575 5vyc:S2 (6.0) BS02 rna ? GO:0002181 ... P62269 28723557
    417576 5vyc:S3 (6.0) BS01 rna ? GO:0002181 ... P62269 28723557
    417577 5vyc:S4 (6.0) BS01 rna ? GO:0002181 ... P62269 28723557
    417578 5vyc:S4 (6.0) BS02 rna ? GO:0002181 ... P62269 28723557
    417579 5vyc:S5 (6.0) BS01 rna ? GO:0002181 ... P62269 28723557
    417580 5vyc:S5 (6.0) BS02 rna ? GO:0002181 ... P62269 28723557
    417581 5vyc:S6 (6.0) BS01 rna ? GO:0002181 ... P62269 28723557
    417582 5vyc:S6 (6.0) BS02 rna ? GO:0002181 ... P62269 28723557
    417583 5vyc:T1 (6.0) BS01 rna ? GO:0000028 ... P39019 28723557
    417584 5vyc:T2 (6.0) BS01 rna ? GO:0000028 ... P39019 28723557
    417585 5vyc:T3 (6.0) BS01 rna ? GO:0000028 ... P39019 28723557
    417586 5vyc:T4 (6.0) BS01 rna ? GO:0000028 ... P39019 28723557
    417587 5vyc:T5 (6.0) BS01 rna ? GO:0000028 ... P39019 28723557
    417588 5vyc:T6 (6.0) BS01 rna ? GO:0000028 ... P39019 28723557
    417589 5vyc:U1 (6.0) BS01 rna ? GO:0002181 ... P60866 28723557
    417590 5vyc:U2 (6.0) BS01 rna ? GO:0002181 ... P60866 28723557
    417591 5vyc:U3 (6.0) BS01 rna ? GO:0002181 ... P60866 28723557
    417592 5vyc:U4 (6.0) BS01 rna ? GO:0002181 ... P60866 28723557
    417593 5vyc:U5 (6.0) BS01 rna ? GO:0002181 ... P60866 28723557
    417594 5vyc:U6 (6.0) BS01 rna ? GO:0002181 ... P60866 28723557
    417595 5vyc:W1 (6.0) BS01 rna ? GO:0002181 ... P62244 28723557
    417596 5vyc:W2 (6.0) BS01 rna ? GO:0002181 ... P62244 28723557
    417597 5vyc:W3 (6.0) BS01 rna ? GO:0002181 ... P62244 28723557
    417598 5vyc:W4 (6.0) BS01 rna ? GO:0002181 ... P62244 28723557
    417599 5vyc:W5 (6.0) BS01 rna ? GO:0002181 ... P62244 28723557
    417600 5vyc:W6 (6.0) BS01 rna ? GO:0002181 ... P62244 28723557

    Reference:
  • Chengxin Zhang, Xi Zhang, Lydia Freddolino, and Yang Zhang. BioLiP2: an updated structure database for biologically relevent ligand-protein interactions, Nucleic Acids Research, gkad630 (2023).
  • Jianyi Yang, Ambrish Roy, and Yang Zhang. BioLiP: a semi-manually curated database for biologically relevant ligand-protein interactions, Nucleic Acids Research, 41: D1096-D1103 (2013) (download the PDF file).