SEQ2FUN

BioLiP
Download all results in tab-seperated text for 942758 receptor-ligand interactions, whose format is explained at readme.txt.
  • Hover over PDB to view the title of the structure. Click PDB to view the structure at the RCSB PDB database. Resolution -1.00 means the resolution is unavailable, e.g., for NMR structures.
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  • Hover over EC number to view the full name of enzymatic activity.
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    # PDB
    (Resolution Å)
    Site # Ligand EC number GO terms UniProt PubMed Binding
    affinity
    418001 5w0u:A (2.9) BS01 ZN 3.5.4.38 GO:0003824 ... P0AEX9
    Q9GZX7
    28757211
    418002 5w0u:A (2.9) BS02 DCM 3.5.4.38 GO:0003824 ... P0AEX9
    Q9GZX7
    28757211
    418003 5w0u:A (2.9) BS03 CA 3.5.4.38 GO:0003824 ... P0AEX9
    Q9GZX7
    28757211
    418004 5w0u:B (2.9) BS01 dna 3.5.4.38 GO:0003824 ... P0AEX9
    Q9GZX7
    28757211
    418005 5w0u:B (2.9) BS02 dna 3.5.4.38 GO:0003824 ... P0AEX9
    Q9GZX7
    28757211
    418006 5w0u:B (2.9) BS03 ZN 3.5.4.38 GO:0003824 ... P0AEX9
    Q9GZX7
    28757211
    418007 5w0u:B (2.9) BS04 DCM 3.5.4.38 GO:0003824 ... P0AEX9
    Q9GZX7
    28757211
    418008 5w0u:B (2.9) BS05 CA 3.5.4.38 GO:0003824 ... P0AEX9
    Q9GZX7
    28757211
    418009 5w0v:A (2.821) BS01 peptide ? GO:0005634 ... Q6CMF0 29035199
    418010 5w0v:B (2.821) BS01 peptide ? GO:0005634 ... Q6CMF0 29035199
    418011 5w0w:F (3.8) BS01 MN 3.1.3.16 GO:0000159 ... P67775 29273778
    418012 5w0z:A (3.61) BS01 ZN 3.5.4.38 GO:0003824 ... P0AEX9
    Q9GZX7
    28757211
    418013 5w0z:B (3.61) BS01 ZN 3.5.4.38 GO:0003824 ... P0AEX9
    Q9GZX7
    28757211
    418014 5w10:A (2.15) BS01 CMP ? N/A Q72MQ6 28601495 MOAD: Kd=0.24uM
    418015 5w10:B (2.15) BS01 CMP ? N/A Q72MQ6 28601495 MOAD: Kd=0.24uM
    418016 5w10:C (2.15) BS01 CMP ? N/A Q72MQ6 28601495 MOAD: Kd=0.24uM
    418017 5w10:D (2.15) BS01 CMP ? N/A Q72MQ6 28601495 MOAD: Kd=0.24uM
    418018 5w11:A (2.311) BS01 GLC 3.2.1.-
    3.2.1.91
    GO:0004553 ... G2Q665 29222836
    418019 5w11:A (2.311) BS02 BGC 3.2.1.-
    3.2.1.91
    GO:0004553 ... G2Q665 29222836
    418020 5w11:A (2.311) BS03 BGC 3.2.1.-
    3.2.1.91
    GO:0004553 ... G2Q665 29222836
    418021 5w11:A (2.311) BS04 GLC 3.2.1.-
    3.2.1.91
    GO:0004553 ... G2Q665 29222836
    418022 5w11:A (2.311) BS05 BGC 3.2.1.-
    3.2.1.91
    GO:0004553 ... G2Q665 29222836
    418023 5w11:A (2.311) BS06 BGC 3.2.1.-
    3.2.1.91
    GO:0004553 ... G2Q665 29222836
    418024 5w11:B (2.311) BS01 GLC 3.2.1.-
    3.2.1.91
    GO:0004553 ... G2Q665 29222836
    418025 5w11:B (2.311) BS02 BGC 3.2.1.-
    3.2.1.91
    GO:0004553 ... G2Q665 29222836
    418026 5w11:B (2.311) BS03 BGC 3.2.1.-
    3.2.1.91
    GO:0004553 ... G2Q665 29222836
    418027 5w11:B (2.311) BS04 GLC 3.2.1.-
    3.2.1.91
    GO:0004553 ... G2Q665 29222836
    418028 5w11:B (2.311) BS05 BGC 3.2.1.-
    3.2.1.91
    GO:0004553 ... G2Q665 29222836
    418029 5w11:B (2.311) BS06 BGC 3.2.1.-
    3.2.1.91
    GO:0004553 ... G2Q665 29222836
    418030 5w12:A (1.88) BS01 9TG 3.5.2.6 GO:0008800 ... Q6DRA1 29144725
    418031 5w12:B (1.88) BS01 9TG 3.5.2.6 GO:0008800 ... Q6DRA1 29144725
    418032 5w12:C (1.88) BS01 9TG 3.5.2.6 GO:0008800 ... Q6DRA1 29144725
    418033 5w12:D (1.88) BS01 9TG 3.5.2.6 GO:0008800 ... Q6DRA1 29144725
    418034 5w13:A (1.95) BS01 SM2 3.5.2.6 GO:0008800 ... Q6DRA1 29144725
    418035 5w13:B (1.95) BS01 SM2 3.5.2.6 GO:0008800 ... Q6DRA1 29144725
    418036 5w13:C (1.95) BS01 SM2 3.5.2.6 GO:0008800 ... Q6DRA1 29144725
    418037 5w13:D (1.95) BS01 SM2 3.5.2.6 GO:0008800 ... Q6DRA1 29144725
    418038 5w14:A (1.88) BS01 9TJ 3.5.2.6 GO:0008800 ... Q6DRA1 29144725
    418039 5w14:B (1.88) BS01 9TJ 3.5.2.6 GO:0008800 ... Q6DRA1 29144725
    418040 5w14:C (1.88) BS01 9TJ 3.5.2.6 GO:0008800 ... Q6DRA1 29144725
    418041 5w14:D (1.88) BS01 9TJ 3.5.2.6 GO:0008800 ... Q6DRA1 29144725
    418042 5w15:D (1.75) BS01 MG ? GO:0016787 ... B1YPY7 N/A
    418043 5w16:A (1.909) BS01 DGL 5.1.1.3 GO:0008360 ... Q5SHT7 N/A
    418044 5w16:B (1.909) BS01 DGL 5.1.1.3 GO:0008360 ... Q5SHT7 N/A
    418045 5w16:C (1.909) BS01 DGL 5.1.1.3 GO:0008360 ... Q5SHT7 N/A
    418046 5w16:D (1.909) BS01 DGL 5.1.1.3 GO:0008360 ... Q5SHT7 N/A
    418047 5w18:A (2.44) BS01 peptide 3.4.21.92 GO:0004176 ... Q2G036 31588734
    418048 5w18:A (2.44) BS02 peptide 3.4.21.92 GO:0004176 ... Q2G036 31588734
    418049 5w18:B (2.44) BS01 peptide 3.4.21.92 GO:0004176 ... Q2G036 31588734
    418050 5w18:B (2.44) BS02 peptide 3.4.21.92 GO:0004176 ... Q2G036 31588734
    418051 5w18:C (2.44) BS01 peptide 3.4.21.92 GO:0004176 ... Q2G036 31588734
    418052 5w18:C (2.44) BS02 peptide 3.4.21.92 GO:0004176 ... Q2G036 31588734
    418053 5w18:D (2.44) BS01 peptide 3.4.21.92 GO:0004176 ... Q2G036 31588734
    418054 5w18:D (2.44) BS02 peptide 3.4.21.92 GO:0004176 ... Q2G036 31588734
    418055 5w18:E (2.44) BS01 peptide 3.4.21.92 GO:0004176 ... Q2G036 31588734
    418056 5w18:E (2.44) BS02 peptide 3.4.21.92 GO:0004176 ... Q2G036 31588734
    418057 5w18:F (2.44) BS01 peptide 3.4.21.92 GO:0004176 ... Q2G036 31588734
    418058 5w18:F (2.44) BS02 peptide 3.4.21.92 GO:0004176 ... Q2G036 31588734
    418059 5w18:G (2.44) BS01 peptide 3.4.21.92 GO:0004176 ... Q2G036 31588734
    418060 5w18:G (2.44) BS02 peptide 3.4.21.92 GO:0004176 ... Q2G036 31588734
    418061 5w18:I (2.44) BS01 peptide 3.4.21.92 GO:0004176 ... Q2G036 31588734
    418062 5w18:I (2.44) BS02 peptide 3.4.21.92 GO:0004176 ... Q2G036 31588734
    418063 5w18:K (2.44) BS01 peptide 3.4.21.92 GO:0004176 ... Q2G036 31588734
    418064 5w18:K (2.44) BS02 peptide 3.4.21.92 GO:0004176 ... Q2G036 31588734
    418065 5w18:L (2.44) BS01 peptide 3.4.21.92 GO:0004176 ... Q2G036 31588734
    418066 5w18:L (2.44) BS02 peptide 3.4.21.92 GO:0004176 ... Q2G036 31588734
    418067 5w18:M (2.44) BS01 peptide 3.4.21.92 GO:0004176 ... Q2G036 31588734
    418068 5w18:M (2.44) BS02 peptide 3.4.21.92 GO:0004176 ... Q2G036 31588734
    418069 5w18:N (2.44) BS01 peptide 3.4.21.92 GO:0004176 ... Q2G036 31588734
    418070 5w18:N (2.44) BS02 peptide 3.4.21.92 GO:0004176 ... Q2G036 31588734
    418071 5w18:S (2.44) BS01 peptide 3.4.21.92 GO:0004176 ... Q2G036 31588734
    418072 5w18:S (2.44) BS02 peptide 3.4.21.92 GO:0004176 ... Q2G036 31588734
    418073 5w18:T (2.44) BS01 peptide 3.4.21.92 GO:0004176 ... Q2G036 31588734
    418074 5w18:T (2.44) BS02 peptide 3.4.21.92 GO:0004176 ... Q2G036 31588734
    418075 5w19:A (2.1) BS01 9TD 4.1.99.1 GO:0006520 ... P28796 30082510 MOAD: Ki~5uM
    418076 5w19:B (2.1) BS01 9TD 4.1.99.1 GO:0006520 ... P28796 30082510 MOAD: Ki~5uM
    418077 5w19:C (2.1) BS01 9TD 4.1.99.1 GO:0006520 ... P28796 30082510 MOAD: Ki~5uM
    418078 5w19:D (2.1) BS01 9TD 4.1.99.1 GO:0006520 ... P28796 30082510 MOAD: Ki~5uM
    418079 5w1a:A (2.227) BS01 FLC ? GO:0003774 ... P05661 31786266
    418080 5w1a:C (2.227) BS01 FLC ? GO:0003774 ... P05661 31786266
    418081 5w1c:A (3.18) BS01 ZN 3.5.4.38 GO:0003824 ... P0AEX9
    Q9GZX7
    28757211
    418082 5w1c:A (3.18) BS02 CTN 3.5.4.38 GO:0003824 ... P0AEX9
    Q9GZX7
    28757211
    418083 5w1c:A (3.18) BS03 CA 3.5.4.38 GO:0003824 ... P0AEX9
    Q9GZX7
    28757211
    418084 5w1c:B (3.18) BS01 dna 3.5.4.38 GO:0003824 ... P0AEX9
    Q9GZX7
    28757211
    418085 5w1c:B (3.18) BS02 ZN 3.5.4.38 GO:0003824 ... P0AEX9
    Q9GZX7
    28757211
    418086 5w1c:B (3.18) BS03 CTN 3.5.4.38 GO:0003824 ... P0AEX9
    Q9GZX7
    28757211
    418087 5w1c:B (3.18) BS04 CA 3.5.4.38 GO:0003824 ... P0AEX9
    Q9GZX7
    28757211
    418088 5w1d:A (3.35) BS01 CA ? GO:0005509 ... Q99PJ1 32963095
    418089 5w1d:A (3.35) BS02 CA ? GO:0005509 ... Q99PJ1 32963095
    418090 5w1d:A (3.35) BS03 CA ? GO:0005509 ... Q99PJ1 32963095
    418091 5w1d:A (3.35) BS04 CA ? GO:0005509 ... Q99PJ1 32963095
    418092 5w1d:A (3.35) BS05 CA ? GO:0005509 ... Q99PJ1 32963095
    418093 5w1d:A (3.35) BS06 CA ? GO:0005509 ... Q99PJ1 32963095
    418094 5w1f:A (2.6) BS01 CA ? GO:0002523 ... P05109 28573847
    418095 5w1f:A (2.6) BS02 NI ? GO:0002523 ... P05109 28573847
    418096 5w1f:B (2.6) BS01 NI ? GO:0002523 ... P06702 28573847
    418097 5w1f:B (2.6) BS02 CA ? GO:0002523 ... P06702 28573847
    418098 5w1f:C (2.6) BS01 NI ? GO:0002523 ... P05109 28573847
    418099 5w1f:C (2.6) BS02 CA ? GO:0002523 ... P05109 28573847
    418100 5w1f:C (2.6) BS03 NI ? GO:0002523 ... P05109 28573847
    418101 5w1f:D (2.6) BS01 NI ? GO:0002523 ... P06702 28573847
    418102 5w1f:D (2.6) BS02 NI ? GO:0002523 ... P06702 28573847
    418103 5w1f:D (2.6) BS03 CA ? GO:0002523 ... P06702 28573847
    418104 5w1f:D (2.6) BS04 CA ? GO:0002523 ... P06702 28573847
    418105 5w1f:E (2.6) BS01 NI ? GO:0002523 ... P05109 28573847
    418106 5w1f:E (2.6) BS02 CA ? GO:0002523 ... P05109 28573847
    418107 5w1f:E (2.6) BS03 NI ? GO:0002523 ... P05109 28573847
    418108 5w1f:F (2.6) BS01 NI ? GO:0002523 ... P06702 28573847
    418109 5w1f:F (2.6) BS02 NI ? GO:0002523 ... P06702 28573847
    418110 5w1f:F (2.6) BS03 CA ? GO:0002523 ... P06702 28573847
    418111 5w1f:F (2.6) BS04 CA ? GO:0002523 ... P06702 28573847
    418112 5w1f:G (2.6) BS01 CA ? GO:0002523 ... P05109 28573847
    418113 5w1f:G (2.6) BS02 NI ? GO:0002523 ... P05109 28573847
    418114 5w1f:H (2.6) BS01 NI ? GO:0002523 ... P06702 28573847
    418115 5w1f:H (2.6) BS02 CA ? GO:0002523 ... P06702 28573847
    418116 5w1h:A (1.99) BS01 rna ? GO:0003723 ... A0A2D0TCG9 28892041
    418117 5w1i:A (2.2) BS01 rna ? GO:0003723 ... A0A2D0TCG9 28892041
    418118 5w1i:C (2.2) BS01 rna ? GO:0003723 ... A0A2D0TCG9 28892041
    418119 5w1j:A (2.7) BS01 FAD 1.8.1.9 GO:0000166 ... Q869D7 28463568
    418120 5w1j:B (2.7) BS01 FAD 1.8.1.9 GO:0000166 ... Q869D7 28463568
    418121 5w1l:A (2.88) BS01 FAD 1.8.1.9 GO:0000166 ... Q869D7 28463568
    418122 5w1l:A (2.88) BS02 AU 1.8.1.9 GO:0000166 ... Q869D7 28463568
    418123 5w1l:B (2.88) BS01 FAD 1.8.1.9 GO:0000166 ... Q869D7 28463568
    418124 5w1l:B (2.88) BS02 AU 1.8.1.9 GO:0000166 ... Q869D7 28463568
    418125 5w1o:A (2.8) BS01 JHM ? GO:0005198 ... Q81007 21115492
    418126 5w1o:C (2.8) BS01 JHM ? GO:0005198 ... Q81007 21115492
    418127 5w1o:C (2.8) BS02 IDS ? GO:0005198 ... Q81007 21115492
    418128 5w1o:C (2.8) BS03 JHM ? GO:0005198 ... Q81007 21115492
    418129 5w1o:D (2.8) BS01 IDS ? GO:0005198 ... Q81007 21115492
    418130 5w1o:D (2.8) BS02 JHM ? GO:0005198 ... Q81007 21115492
    418131 5w1q:A (1.95) BS01 DGL 5.1.1.3 GO:0008360 ... K2K6A3 N/A
    418132 5w1q:B (1.95) BS01 DGL 5.1.1.3 GO:0008360 ... K2K6A3 N/A
    418133 5w1s:D (3.805) BS01 MG 2.7.7.6 GO:0000287 ... P0A8T7 29478808
    418134 5w1s:D (3.805) BS02 ZN 2.7.7.6 GO:0000287 ... P0A8T7 29478808
    418135 5w1s:D (3.805) BS03 ZN 2.7.7.6 GO:0000287 ... P0A8T7 29478808
    418136 5w1s:J (3.805) BS01 MG 2.7.7.6 GO:0000287 ... P0A8T7 29478808
    418137 5w1s:J (3.805) BS02 ZN 2.7.7.6 GO:0000287 ... P0A8T7 29478808
    418138 5w1s:J (3.805) BS03 ZN 2.7.7.6 GO:0000287 ... P0A8T7 29478808
    418139 5w1t:D (4.5) BS01 MG 2.7.7.6 GO:0000287 ... P0A8T7 29478808
    418140 5w1t:D (4.5) BS02 ZN 2.7.7.6 GO:0000287 ... P0A8T7 29478808
    418141 5w1t:D (4.5) BS03 ZN 2.7.7.6 GO:0000287 ... P0A8T7 29478808
    418142 5w1t:J (4.5) BS01 MG 2.7.7.6 GO:0000287 ... P0A8T7 29478808
    418143 5w1t:J (4.5) BS02 ZN 2.7.7.6 GO:0000287 ... P0A8T7 29478808
    418144 5w1t:J (4.5) BS03 ZN 2.7.7.6 GO:0000287 ... P0A8T7 29478808
    418145 5w1t:M (4.5) BS01 ZN ? GO:0005737 ... P0ABS1 29478808
    418146 5w1t:N (4.5) BS01 ZN ? GO:0005737 ... P0ABS1 29478808
    418147 5w1v:A (3.31) BS01 peptide ? N/A P13747 28972140
    418148 5w1v:D (3.31) BS01 peptide N/A N/A N/A 28972140
    418149 5w1v:F (3.31) BS01 peptide ? N/A P13747 28972140
    418150 5w1v:I (3.31) BS01 peptide N/A N/A N/A 28972140
    418151 5w1v:K (3.31) BS01 peptide ? N/A P13747 28972140
    418152 5w1v:N (3.31) BS01 peptide N/A N/A N/A 28972140
    418153 5w1v:P (3.31) BS01 peptide ? N/A P13747 28972140
    418154 5w1v:S (3.31) BS01 peptide N/A N/A N/A 28972140
    418155 5w1w:A (3.1) BS01 peptide ? N/A P13747 28972140
    418156 5w1w:D (3.1) BS01 peptide N/A N/A N/A 28972140
    418157 5w1w:F (3.1) BS01 peptide ? N/A P13747 28972140
    418158 5w1w:I (3.1) BS01 peptide N/A N/A N/A 28972140
    418159 5w1w:K (3.1) BS01 peptide ? N/A P13747 28972140
    418160 5w1w:N (3.1) BS01 peptide N/A N/A N/A 28972140
    418161 5w1w:P (3.1) BS01 peptide ? N/A P13747 28972140
    418162 5w1w:S (3.1) BS01 peptide N/A N/A N/A 28972140
    418163 5w1x:A (3.374) BS01 JHM ? GO:0005198 ... P06794 21115492
    418164 5w1x:B (3.374) BS01 IDS ? GO:0005198 ... P06794 21115492
    418165 5w1x:B (3.374) BS02 IDS ? GO:0005198 ... P06794 21115492
    418166 5w1x:E (3.374) BS01 JHM ? GO:0005198 ... P06794 21115492
    418167 5w1x:E (3.374) BS02 JHM ? GO:0005198 ... P06794 21115492
    418168 5w1x:F (3.374) BS01 JHM ? GO:0005198 ... P06794 21115492
    418169 5w1x:F (3.374) BS02 JHM ? GO:0005198 ... P06794 21115492
    418170 5w1x:F (3.374) BS03 JHM ? GO:0005198 ... P06794 21115492
    418171 5w1x:F (3.374) BS04 IDS ? GO:0005198 ... P06794 21115492
    418172 5w1x:G (3.374) BS01 IDS ? GO:0005198 ... P06794 21115492
    418173 5w1x:G (3.374) BS02 IDS ? GO:0005198 ... P06794 21115492
    418174 5w1x:J (3.374) BS01 IDS ? GO:0005198 ... P06794 21115492
    418175 5w1x:L (3.374) BS01 IDS ? GO:0005198 ... P06794 21115492
    418176 5w1x:N (3.374) BS01 JHM ? GO:0005198 ... P06794 21115492
    418177 5w1x:N (3.374) BS02 IDS ? GO:0005198 ... P06794 21115492
    418178 5w1y:A (1.7) BS01 9SV 2.1.1.-
    2.1.1.361
    GO:0042799 ... Q9NQR1 N/A
    418179 5w1y:B (1.7) BS01 9SV 2.1.1.-
    2.1.1.361
    GO:0042799 ... Q9NQR1 N/A
    418180 5w21:A (3.0) BS01 ZN 3.2.1.31 GO:0004553 ... Q9UEF7 29342138
    418181 5w22:A (1.762) BS01 GDP 3.6.5.2 GO:0003924 ... P01116 29199977
    418182 5w22:B (1.762) BS01 GDP 3.6.5.2 GO:0003924 ... P01116 29199977
    418183 5w23:J (3.4) BS01 ZN N/A N/A N/A 29187732
    418184 5w23:N (3.4) BS01 ZN N/A N/A N/A 29187732
    418185 5w24:H (1.5) BS01 BU3 N/A N/A N/A 29187732
    418186 5w25:A (2.65) BS01 ASP 6.1.1.23 GO:0000166 ... P9WFW3 N/A
    418187 5w25:A (2.65) BS02 LYS 6.1.1.23 GO:0000166 ... P9WFW3 N/A
    418188 5w25:B (2.65) BS01 ASP 6.1.1.23 GO:0000166 ... P9WFW3 N/A
    418189 5w26:A (1.9) BS01 9SG 3.2.1.18 GO:0004308 ... P03472 29397718
    418190 5w26:A (1.9) BS02 CA 3.2.1.18 GO:0004308 ... P03472 29397718
    418191 5w26:A (1.9) BS03 9WM 3.2.1.18 GO:0004308 ... P03472 29397718
    418192 5w26:A (1.9) BS04 9VP 3.2.1.18 GO:0004308 ... P03472 29397718
    418193 5w27:A (1.8) BS01 9VG ? GO:0046872 ... A0A125SA29 N/A
    418194 5w27:A (1.8) BS02 9VG ? GO:0046872 ... A0A125SA29 N/A
    418195 5w27:B (1.8) BS01 9VG ? GO:0046872 ... A0A125SA29 N/A
    418196 5w27:B (1.8) BS02 9VG ? GO:0046872 ... A0A125SA29 N/A
    418197 5w2a:A (2.9) BS01 dna 2.7.7.7 GO:0003684 ... Q9UBT6 28972744
    418198 5w2a:A (2.9) BS02 dna 2.7.7.7 GO:0003684 ... Q9UBT6 28972744
    418199 5w2a:A (2.9) BS03 MG 2.7.7.7 GO:0003684 ... Q9UBT6 28972744
    418200 5w2a:A (2.9) BS04 0KX 2.7.7.7 GO:0003684 ... Q9UBT6 28972744

    Reference:
  • Chengxin Zhang, Xi Zhang, Lydia Freddolino, and Yang Zhang. BioLiP2: an updated structure database for biologically relevent ligand-protein interactions, Nucleic Acids Research, gkad630 (2023).
  • Jianyi Yang, Ambrish Roy, and Yang Zhang. BioLiP: a semi-manually curated database for biologically relevant ligand-protein interactions, Nucleic Acids Research, 41: D1096-D1103 (2013) (download the PDF file).