SEQ2FUN

BioLiP
Download all results in tab-seperated text for 942758 receptor-ligand interactions, whose format is explained at readme.txt.
  • Hover over PDB to view the title of the structure. Click PDB to view the structure at the RCSB PDB database. Resolution -1.00 means the resolution is unavailable, e.g., for NMR structures.
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  • Hover over Ligand to view the full ligand name. Click Ligand to view the 2D diagram and other detail information of the ligand.
  • Hover over EC number to view the full name of enzymatic activity.
  • Hover over GO terms to view all GO terms.
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    # PDB
    (Resolution Å)
    Site # Ligand EC number GO terms UniProt PubMed Binding
    affinity
    418401 5w4b:F (2.65) BS03 9W4 3.13.2.1 GO:0004013 ... P23526 28533090
    418402 5w4c:A (2.255) BS01 FAD 1.8.1.9 GO:0000166 ... J9VRX9 N/A
    418403 5w4c:A (2.255) BS02 CA 1.8.1.9 GO:0000166 ... J9VRX9 N/A
    418404 5w4c:A (2.255) BS03 FAD 1.8.1.9 GO:0000166 ... J9VRX9 N/A
    418405 5w4c:B (2.255) BS01 FAD 1.8.1.9 GO:0000166 ... J9VRX9 N/A
    418406 5w4c:B (2.255) BS02 CA 1.8.1.9 GO:0000166 ... J9VRX9 N/A
    418407 5w4e:B (2.18) BS01 peptide ?
    3.5.3.1
    GO:0005737 ... A0A2R2JFW7
    P52293
    29931796
    418408 5w4e:B (2.18) BS02 peptide ?
    3.5.3.1
    GO:0005737 ... A0A2R2JFW7
    P52293
    29931796
    418409 5w4f:B (1.984) BS01 peptide ? GO:0005737 ... P52293 29931796
    418410 5w4f:B (1.984) BS02 peptide ? GO:0005737 ... P52293 29931796
    418411 5w4g:B (2.038) BS01 peptide ? GO:0005737 ... P52293 N/A
    418412 5w4k:10 (2.7) BS01 rna ? GO:0003735 ... P60493 28846667
    418413 5w4k:10 (2.7) BS02 rna ? GO:0003735 ... P60493 28846667
    418414 5w4k:10 (2.7) BS03 MG ? GO:0003735 ... P60493 28846667
    418415 5w4k:10 (2.7) BS04 MG ? GO:0003735 ... P60493 28846667
    418416 5w4k:11 (2.7) BS01 rna ? GO:0003735 ... P60494 28846667
    418417 5w4k:11 (2.7) BS02 rna ? GO:0003735 ... P60494 28846667
    418418 5w4k:11 (2.7) BS03 MG ? GO:0003735 ... P60494 28846667
    418419 5w4k:11 (2.7) BS04 MG ? GO:0003735 ... P60494 28846667
    418420 5w4k:12 (2.7) BS01 rna ? GO:0003735 ... Q5SHP6 28846667
    418421 5w4k:12 (2.7) BS02 MG ? GO:0003735 ... Q5SHP6 28846667
    418422 5w4k:13 (2.7) BS01 rna ? GO:0003735 ... Q5SHQ6 28846667
    418423 5w4k:13 (2.7) BS02 rna ? GO:0003735 ... Q5SHQ6 28846667
    418424 5w4k:13 (2.7) BS03 MG ? GO:0003735 ... Q5SHQ6 28846667
    418425 5w4k:14 (2.7) BS01 rna ? GO:0003735 ... Q5SJE1 28846667
    418426 5w4k:14 (2.7) BS02 ZN ? GO:0003735 ... Q5SJE1 28846667
    418427 5w4k:15 (2.7) BS01 rna ? GO:0003735 ... P80339 28846667
    418428 5w4k:15 (2.7) BS02 MG ? GO:0003735 ... P80339 28846667
    418429 5w4k:15 (2.7) BS03 ZN ? GO:0003735 ... P80339 28846667
    418430 5w4k:16 (2.7) BS01 rna ? GO:0000049 ... P35871 28846667
    418431 5w4k:16 (2.7) BS02 ZN ? GO:0000049 ... P35871 28846667
    418432 5w4k:16 (2.7) BS03 MG ? GO:0000049 ... P35871 28846667
    418433 5w4k:17 (2.7) BS01 rna ? GO:0003735 ... P80340 28846667
    418434 5w4k:17 (2.7) BS02 MG ? GO:0003735 ... P80340 28846667
    418435 5w4k:17 (2.7) BS03 MG ? GO:0003735 ... P80340 28846667
    418436 5w4k:18 (2.7) BS01 rna ? GO:0003735 ... Q5SKU1 28846667
    418437 5w4k:18 (2.7) BS02 MG ? GO:0003735 ... Q5SKU1 28846667
    418438 5w4k:18 (2.7) BS03 MG ? GO:0003735 ... Q5SKU1 28846667
    418439 5w4k:18 (2.7) BS04 MG ? GO:0003735 ... Q5SKU1 28846667
    418440 5w4k:19 (2.7) BS01 rna ? GO:0003735 ... Q5SHR2 28846667
    418441 5w4k:19 (2.7) BS02 ZN ? GO:0003735 ... Q5SHR2 28846667
    418442 5w4k:1D (2.7) BS01 rna ? GO:0002181 ... P60405 28846667
    418443 5w4k:1D (2.7) BS02 rna ? GO:0002181 ... P60405 28846667
    418444 5w4k:1D (2.7) BS03 MG ? GO:0002181 ... P60405 28846667
    418445 5w4k:1D (2.7) BS04 MG ? GO:0002181 ... P60405 28846667
    418446 5w4k:1D (2.7) BS05 MG ? GO:0002181 ... P60405 28846667
    418447 5w4k:1D (2.7) BS06 MG ? GO:0002181 ... P60405 28846667
    418448 5w4k:1D (2.7) BS07 MG ? GO:0002181 ... P60405 28846667
    418449 5w4k:1D (2.7) BS08 MG ? GO:0002181 ... P60405 28846667
    418450 5w4k:1D (2.7) BS09 MG ? GO:0002181 ... P60405 28846667
    418451 5w4k:1D (2.7) BS10 MG ? GO:0002181 ... P60405 28846667
    418452 5w4k:1D (2.7) BS11 MG ? GO:0002181 ... P60405 28846667
    418453 5w4k:1E (2.7) BS01 rna ? GO:0003735 ... Q5SHN8 28846667
    418454 5w4k:1E (2.7) BS02 MG ? GO:0003735 ... Q5SHN8 28846667
    418455 5w4k:1E (2.7) BS03 MG ? GO:0003735 ... Q5SHN8 28846667
    418456 5w4k:1E (2.7) BS04 MG ? GO:0003735 ... Q5SHN8 28846667
    418457 5w4k:1F (2.7) BS01 rna ? GO:0003735 ... Q5SHN9 28846667
    418458 5w4k:1F (2.7) BS02 MG ? GO:0003735 ... Q5SHN9 28846667
    418459 5w4k:1F (2.7) BS03 MG ? GO:0003735 ... Q5SHN9 28846667
    418460 5w4k:1F (2.7) BS04 MG ? GO:0003735 ... Q5SHN9 28846667
    418461 5w4k:1F (2.7) BS05 MG ? GO:0003735 ... Q5SHN9 28846667
    418462 5w4k:1F (2.7) BS06 MG ? GO:0003735 ... Q5SHN9 28846667
    418463 5w4k:1F (2.7) BS07 MG ? GO:0003735 ... Q5SHN9 28846667
    418464 5w4k:1F (2.7) BS08 MG ? GO:0003735 ... Q5SHN9 28846667
    418465 5w4k:1F (2.7) BS09 MG ? GO:0003735 ... Q5SHN9 28846667
    418466 5w4k:1F (2.7) BS10 MG ? GO:0003735 ... Q5SHN9 28846667
    418467 5w4k:1F (2.7) BS11 MG ? GO:0003735 ... Q5SHN9 28846667
    418468 5w4k:1F (2.7) BS12 MG ? GO:0003735 ... Q5SHN9 28846667
    418469 5w4k:1G (2.7) BS01 rna ? GO:0000049 ... Q5SHQ0 28846667
    418470 5w4k:1G (2.7) BS02 rna ? GO:0000049 ... Q5SHQ0 28846667
    418471 5w4k:1G (2.7) BS03 rna ? GO:0000049 ... Q5SHQ0 28846667
    418472 5w4k:1G (2.7) BS04 MG ? GO:0000049 ... Q5SHQ0 28846667
    418473 5w4k:1G (2.7) BS05 MG ? GO:0000049 ... Q5SHQ0 28846667
    418474 5w4k:1G (2.7) BS06 MG ? GO:0000049 ... Q5SHQ0 28846667
    418475 5w4k:1H (2.7) BS01 rna ? GO:0002181 ... P0DOY8 28846667
    418476 5w4k:1I (2.7) BS01 rna ? GO:0003735 ... Q5SLQ1 28846667
    418477 5w4k:1I (2.7) BS02 MG ? GO:0003735 ... Q5SLQ1 28846667
    418478 5w4k:1N (2.7) BS01 rna ? GO:0003729 ... P60488 28846667
    418479 5w4k:1N (2.7) BS02 MG ? GO:0003729 ... P60488 28846667
    418480 5w4k:1N (2.7) BS03 MG ? GO:0003729 ... P60488 28846667
    418481 5w4k:1O (2.7) BS01 rna ? GO:0003735 ... Q5SHP8 28846667
    418482 5w4k:1O (2.7) BS02 rna ? GO:0003735 ... Q5SHP8 28846667
    418483 5w4k:1O (2.7) BS03 MG ? GO:0003735 ... Q5SHP8 28846667
    418484 5w4k:1O (2.7) BS04 MG ? GO:0003735 ... Q5SHP8 28846667
    418485 5w4k:1P (2.7) BS01 rna ? GO:0003735 ... Q5SHQ7 28846667
    418486 5w4k:1P (2.7) BS02 MG ? GO:0003735 ... Q5SHQ7 28846667
    418487 5w4k:1P (2.7) BS03 MG ? GO:0003735 ... Q5SHQ7 28846667
    418488 5w4k:1P (2.7) BS04 MG ? GO:0003735 ... Q5SHQ7 28846667
    418489 5w4k:1P (2.7) BS05 MG ? GO:0003735 ... Q5SHQ7 28846667
    418490 5w4k:1P (2.7) BS06 MG ? GO:0003735 ... Q5SHQ7 28846667
    418491 5w4k:1P (2.7) BS07 MG ? GO:0003735 ... Q5SHQ7 28846667
    418492 5w4k:1Q (2.7) BS01 rna ? GO:0000049 ... P60489 28846667
    418493 5w4k:1Q (2.7) BS02 rna ? GO:0000049 ... P60489 28846667
    418494 5w4k:1Q (2.7) BS03 rna ? GO:0000049 ... P60489 28846667
    418495 5w4k:1Q (2.7) BS04 MG ? GO:0000049 ... P60489 28846667
    418496 5w4k:1Q (2.7) BS05 MG ? GO:0000049 ... P60489 28846667
    418497 5w4k:1Q (2.7) BS06 MG ? GO:0000049 ... P60489 28846667
    418498 5w4k:1Q (2.7) BS07 MG ? GO:0000049 ... P60489 28846667
    418499 5w4k:1Q (2.7) BS08 MG ? GO:0000049 ... P60489 28846667
    418500 5w4k:1R (2.7) BS01 rna ? GO:0003735 ... Q9Z9H5 28846667
    418501 5w4k:1R (2.7) BS02 MG ? GO:0003735 ... Q9Z9H5 28846667
    418502 5w4k:1R (2.7) BS03 MG ? GO:0003735 ... Q9Z9H5 28846667
    418503 5w4k:1S (2.7) BS01 rna ? GO:0003735 ... Q5SHQ4 28846667
    418504 5w4k:1S (2.7) BS02 rna ? GO:0003735 ... Q5SHQ4 28846667
    418505 5w4k:1S (2.7) BS03 MG ? GO:0003735 ... Q5SHQ4 28846667
    418506 5w4k:1S (2.7) BS04 MG ? GO:0003735 ... Q5SHQ4 28846667
    418507 5w4k:1T (2.7) BS01 rna ? GO:0003735 ... P60490 28846667
    418508 5w4k:1T (2.7) BS02 rna ? GO:0003735 ... P60490 28846667
    418509 5w4k:1U (2.7) BS01 rna ? GO:0000027 ... P60491 28846667
    418510 5w4k:1U (2.7) BS02 MG ? GO:0000027 ... P60491 28846667
    418511 5w4k:1U (2.7) BS03 MG ? GO:0000027 ... P60491 28846667
    418512 5w4k:1U (2.7) BS04 MG ? GO:0000027 ... P60491 28846667
    418513 5w4k:1U (2.7) BS05 MG ? GO:0000027 ... P60491 28846667
    418514 5w4k:1U (2.7) BS06 MG ? GO:0000027 ... P60491 28846667
    418515 5w4k:1U (2.7) BS07 MG ? GO:0000027 ... P60491 28846667
    418516 5w4k:1U (2.7) BS08 MG ? GO:0000027 ... P60491 28846667
    418517 5w4k:1U (2.7) BS09 MG ? GO:0000027 ... P60491 28846667
    418518 5w4k:1V (2.7) BS01 rna ? GO:0003723 ... P60492 28846667
    418519 5w4k:1V (2.7) BS02 MG ? GO:0003723 ... P60492 28846667
    418520 5w4k:1V (2.7) BS03 MG ? GO:0003723 ... P60492 28846667
    418521 5w4k:1V (2.7) BS04 MG ? GO:0003723 ... P60492 28846667
    418522 5w4k:1V (2.7) BS05 MG ? GO:0003723 ... P60492 28846667
    418523 5w4k:1V (2.7) BS06 MG ? GO:0003723 ... P60492 28846667
    418524 5w4k:1V (2.7) BS07 MG ? GO:0003723 ... P60492 28846667
    418525 5w4k:1W (2.7) BS01 rna ? GO:0003735 ... Q5SHP3 28846667
    418526 5w4k:1W (2.7) BS02 MG ? GO:0003735 ... Q5SHP3 28846667
    418527 5w4k:1W (2.7) BS03 MG ? GO:0003735 ... Q5SHP3 28846667
    418528 5w4k:1W (2.7) BS04 MG ? GO:0003735 ... Q5SHP3 28846667
    418529 5w4k:1W (2.7) BS05 MG ? GO:0003735 ... Q5SHP3 28846667
    418530 5w4k:1X (2.7) BS01 rna ? GO:0003735 ... Q5SHP0 28846667
    418531 5w4k:1X (2.7) BS02 MG ? GO:0003735 ... Q5SHP0 28846667
    418532 5w4k:1X (2.7) BS03 MG ? GO:0003735 ... Q5SHP0 28846667
    418533 5w4k:1X (2.7) BS04 MG ? GO:0003735 ... Q5SHP0 28846667
    418534 5w4k:1X (2.7) BS05 MG ? GO:0003735 ... Q5SHP0 28846667
    418535 5w4k:1X (2.7) BS06 MG ? GO:0003735 ... Q5SHP0 28846667
    418536 5w4k:1Y (2.7) BS01 rna ? GO:0003723 ... Q5SHP9 28846667
    418537 5w4k:1Y (2.7) BS02 ZN ? GO:0003723 ... Q5SHP9 28846667
    418538 5w4k:1Y (2.7) BS03 MG ? GO:0003723 ... Q5SHP9 28846667
    418539 5w4k:1Z (2.7) BS01 rna ? GO:0003723 ... Q5SHZ1 28846667
    418540 5w4k:1Z (2.7) BS02 rna ? GO:0003723 ... Q5SHZ1 28846667
    418541 5w4k:1b (2.7) BS01 rna ? GO:0003735 ... P80371 28846667
    418542 5w4k:1b (2.7) BS02 MG ? GO:0003735 ... P80371 28846667
    418543 5w4k:1c (2.7) BS01 rna ? GO:0003676 ... P80372 28846667
    418544 5w4k:1d (2.7) BS01 rna ? GO:0003723 ... P80373 28846667
    418545 5w4k:1d (2.7) BS02 SF4 ? GO:0003723 ... P80373 28846667
    418546 5w4k:1e (2.7) BS01 rna ? GO:0003723 ... Q5SHQ5 28846667
    418547 5w4k:1e (2.7) BS02 MG ? GO:0003723 ... Q5SHQ5 28846667
    418548 5w4k:1e (2.7) BS03 MG ? GO:0003723 ... Q5SHQ5 28846667
    418549 5w4k:1f (2.7) BS01 rna ? GO:0003735 ... Q5SLP8 28846667
    418550 5w4k:1f (2.7) BS02 MG ? GO:0003735 ... Q5SLP8 28846667
    418551 5w4k:1g (2.7) BS01 rna ? GO:0000049 ... P17291 28846667
    418552 5w4k:1g (2.7) BS02 rna ? GO:0000049 ... P17291 28846667
    418553 5w4k:1h (2.7) BS01 rna ? GO:0003735 ... P0DOY9 28846667
    418554 5w4k:1i (2.7) BS01 rna ? GO:0000049 ... P80374 28846667
    418555 5w4k:1i (2.7) BS02 rna ? GO:0000049 ... P80374 28846667
    418556 5w4k:1j (2.7) BS01 rna ? GO:0000049 ... Q5SHN7 28846667
    418557 5w4k:1k (2.7) BS01 rna ? GO:0003735 ... P80376 28846667
    418558 5w4k:1k (2.7) BS02 MG ? GO:0003735 ... P80376 28846667
    418559 5w4k:1l (2.7) BS01 rna ? GO:0000049 ... Q5SHN3 28846667
    418560 5w4k:1l (2.7) BS02 rna ? GO:0000049 ... Q5SHN3 28846667
    418561 5w4k:1l (2.7) BS03 MG ? GO:0000049 ... Q5SHN3 28846667
    418562 5w4k:1m (2.7) BS01 rna ? GO:0000049 ... P80377 28846667
    418563 5w4k:1m (2.7) BS02 rna ? GO:0000049 ... P80377 28846667
    418564 5w4k:1m (2.7) BS03 rna ? GO:0000049 ... P80377 28846667
    418565 5w4k:1m (2.7) BS04 MG ? GO:0000049 ... P80377 28846667
    418566 5w4k:1n (2.7) BS01 rna ? GO:0003735 ... P0DOY6 28846667
    418567 5w4k:1n (2.7) BS02 ZN ? GO:0003735 ... P0DOY6 28846667
    418568 5w4k:1o (2.7) BS01 rna ? GO:0003735 ... Q5SJ76 28846667
    418569 5w4k:1o (2.7) BS02 rna ? GO:0003735 ... Q5SJ76 28846667
    418570 5w4k:1p (2.7) BS01 rna ? GO:0003735 ... Q5SJH3 28846667
    418571 5w4k:1q (2.7) BS01 rna ? GO:0003735 ... P0DOY7 28846667
    418572 5w4k:1r (2.7) BS01 rna ? GO:0003735 ... Q5SLQ0 28846667
    418573 5w4k:1s (2.7) BS01 rna ? GO:0000028 ... Q5SHP2 28846667
    418574 5w4k:1t (2.7) BS01 rna ? GO:0003723 ... P80380 28846667
    418575 5w4k:20 (2.7) BS01 rna ? GO:0003735 ... P60493 28846667
    418576 5w4k:20 (2.7) BS02 rna ? GO:0003735 ... P60493 28846667
    418577 5w4k:20 (2.7) BS03 rna ? GO:0003735 ... P60493 28846667
    418578 5w4k:21 (2.7) BS01 rna ? GO:0003735 ... P60494 28846667
    418579 5w4k:21 (2.7) BS02 rna ? GO:0003735 ... P60494 28846667
    418580 5w4k:21 (2.7) BS03 MG ? GO:0003735 ... P60494 28846667
    418581 5w4k:22 (2.7) BS01 rna ? GO:0003735 ... Q5SHP6 28846667
    418582 5w4k:23 (2.7) BS01 rna ? GO:0003735 ... Q5SHQ6 28846667
    418583 5w4k:23 (2.7) BS02 rna ? GO:0003735 ... Q5SHQ6 28846667
    418584 5w4k:23 (2.7) BS03 MG ? GO:0003735 ... Q5SHQ6 28846667
    418585 5w4k:24 (2.7) BS01 rna ? GO:0003735 ... Q5SJE1 28846667
    418586 5w4k:24 (2.7) BS02 ZN ? GO:0003735 ... Q5SJE1 28846667
    418587 5w4k:25 (2.7) BS01 rna ? GO:0003735 ... P80339 28846667
    418588 5w4k:25 (2.7) BS02 MG ? GO:0003735 ... P80339 28846667
    418589 5w4k:25 (2.7) BS03 ZN ? GO:0003735 ... P80339 28846667
    418590 5w4k:25 (2.7) BS04 MG ? GO:0003735 ... P80339 28846667
    418591 5w4k:26 (2.7) BS01 rna ? GO:0000049 ... P35871 28846667
    418592 5w4k:26 (2.7) BS02 ZN ? GO:0000049 ... P35871 28846667
    418593 5w4k:27 (2.7) BS01 rna ? GO:0003735 ... P80340 28846667
    418594 5w4k:28 (2.7) BS01 rna ? GO:0003735 ... Q5SKU1 28846667
    418595 5w4k:29 (2.7) BS01 rna ? GO:0003735 ... Q5SHR2 28846667
    418596 5w4k:29 (2.7) BS02 ZN ? GO:0003735 ... Q5SHR2 28846667
    418597 5w4k:2D (2.7) BS01 rna ? GO:0002181 ... P60405 28846667
    418598 5w4k:2D (2.7) BS02 rna ? GO:0002181 ... P60405 28846667
    418599 5w4k:2D (2.7) BS03 MG ? GO:0002181 ... P60405 28846667
    418600 5w4k:2D (2.7) BS04 MG ? GO:0002181 ... P60405 28846667

    Reference:
  • Chengxin Zhang, Xi Zhang, Lydia Freddolino, and Yang Zhang. BioLiP2: an updated structure database for biologically relevent ligand-protein interactions, Nucleic Acids Research, gkad630 (2023).
  • Jianyi Yang, Ambrish Roy, and Yang Zhang. BioLiP: a semi-manually curated database for biologically relevant ligand-protein interactions, Nucleic Acids Research, 41: D1096-D1103 (2013) (download the PDF file).