SEQ2FUN

BioLiP
Download all results in tab-seperated text for 942758 receptor-ligand interactions, whose format is explained at readme.txt.
  • Hover over PDB to view the title of the structure. Click PDB to view the structure at the RCSB PDB database. Resolution -1.00 means the resolution is unavailable, e.g., for NMR structures.
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    # PDB
    (Resolution Å)
    Site # Ligand EC number GO terms UniProt PubMed Binding
    affinity
    419001 5w73:A (2.202) BS03 GY9 3.1.-.- GO:0003723 ... C3W5S0 29215062 MOAD: Ki=0.5uM
    419002 5w74:A (3.65) BS01 ADP ? GO:0005524 ... Q877G8 N/A
    419003 5w74:B (3.65) BS01 ADP ? GO:0005524 ... Q877G8 N/A
    419004 5w74:C (3.65) BS01 ADP ? GO:0005524 ... Q877G8 N/A
    419005 5w74:D (3.65) BS01 ADP ? GO:0005524 ... Q877G8 N/A
    419006 5w74:E (3.65) BS01 ADP ? GO:0005524 ... Q877G8 N/A
    419007 5w74:F (3.65) BS01 ADP ? GO:0005524 ... Q877G8 N/A
    419008 5w74:G (3.65) BS01 ADP ? GO:0005524 ... Q877G8 N/A
    419009 5w74:H (3.65) BS01 ADP ? GO:0005524 ... Q877G8 N/A
    419010 5w75:A (2.298) BS01 GDP ? GO:0003746 ... B9K884 29276038
    419011 5w75:B (2.298) BS01 GLC ? GO:0003746 ... B9K884 29276038
    419012 5w75:B (2.298) BS02 FRU ? GO:0003746 ... B9K884 29276038
    419013 5w75:B (2.298) BS03 GDP ? GO:0003746 ... B9K884 29276038
    419014 5w75:C (2.298) BS01 GLC ? GO:0003746 ... B9K884 29276038
    419015 5w75:C (2.298) BS02 FRU ? GO:0003746 ... B9K884 29276038
    419016 5w75:C (2.298) BS03 GLC ? GO:0003746 ... B9K884 29276038
    419017 5w75:C (2.298) BS04 GDP ? GO:0003746 ... B9K884 29276038
    419018 5w75:D (2.298) BS01 FRU ? GO:0003746 ... B9K884 29276038
    419019 5w75:D (2.298) BS02 GDP ? GO:0003746 ... B9K884 29276038
    419020 5w76:A (2.152) BS01 GDP N/A GO:0003746 ... N/A 29276038
    419021 5w78:B (2.271) BS01 CA 3.1.1.77 GO:0016788 ... P28039 29343645
    419022 5w78:B (2.271) BS02 CA 3.1.1.77 GO:0016788 ... P28039 29343645
    419023 5w7a:B (2.3) BS01 CA 3.1.1.77 GO:0016788 ... O18823 29343645
    419024 5w7a:B (2.3) BS02 CA 3.1.1.77 GO:0016788 ... O18823 29343645
    419025 5w7a:B (2.3) BS03 CA 3.1.1.77 GO:0016788 ... O18823 29343645
    419026 5w7a:B (2.3) BS04 PO4 3.1.1.77 GO:0016788 ... O18823 29343645
    419027 5w7b:A (1.9) BS01 FUC 3.1.1.77 GO:0050528 ... O18823 29343645
    419028 5w7b:B (1.9) BS01 FUC 3.1.1.77 GO:0050528 ... O18823 29343645
    419029 5w7b:C (1.9) BS01 CA 3.1.1.77 GO:0016788 ... O18823 29343645
    419030 5w7b:C (1.9) BS02 CA 3.1.1.77 GO:0016788 ... O18823 29343645
    419031 5w7b:C (1.9) BS03 CA 3.1.1.77 GO:0016788 ... O18823 29343645
    419032 5w7b:C (1.9) BS04 PO4 3.1.1.77 GO:0016788 ... O18823 29343645
    419033 5w7b:D (1.9) BS01 CA 3.1.1.77 GO:0016788 ... O18823 29343645
    419034 5w7b:D (1.9) BS02 CA 3.1.1.77 GO:0016788 ... O18823 29343645
    419035 5w7b:D (1.9) BS03 CA 3.1.1.77 GO:0016788 ... O18823 29343645
    419036 5w7b:D (1.9) BS04 PO4 3.1.1.77 GO:0016788 ... O18823 29343645
    419037 5w7c:C (2.23) BS01 CA 3.1.1.77 GO:0016788 ... P28039 29343645
    419038 5w7c:C (2.23) BS02 CA 3.1.1.77 GO:0016788 ... P28039 29343645
    419039 5w7c:C (2.23) BS03 CA 3.1.1.77 GO:0016788 ... P28039 29343645
    419040 5w7c:D (2.23) BS01 CA 3.1.1.77 GO:0016788 ... P28039 29343645
    419041 5w7c:D (2.23) BS02 CA 3.1.1.77 GO:0016788 ... P28039 29343645
    419042 5w7c:D (2.23) BS03 CA 3.1.1.77 GO:0016788 ... P28039 29343645
    419043 5w7d:A (1.75) BS01 CA 3.1.1.77 GO:0005509 ... O35298 29343645
    419044 5w7d:A (1.75) BS02 CA 3.1.1.77 GO:0005509 ... O35298 29343645
    419045 5w7d:A (1.75) BS03 CA 3.1.1.77 GO:0005509 ... O35298 29343645
    419046 5w7e:A (1.83) BS01 CA 3.1.1.77 GO:0005509 ... O35298 29343645
    419047 5w7e:A (1.83) BS02 CA 3.1.1.77 GO:0005509 ... O35298 29343645
    419048 5w7e:A (1.83) BS03 CA 3.1.1.77 GO:0005509 ... O35298 29343645
    419049 5w7e:A (1.83) BS04 FAW 3.1.1.77 GO:0005509 ... O35298 29343645
    419050 5w7e:B (1.83) BS01 CA 3.1.1.77 GO:0005509 ... O35298 29343645
    419051 5w7e:B (1.83) BS02 CA 3.1.1.77 GO:0005509 ... O35298 29343645
    419052 5w7e:B (1.83) BS03 CA 3.1.1.77 GO:0005509 ... O35298 29343645
    419053 5w7e:B (1.83) BS04 FAW 3.1.1.77 GO:0005509 ... O35298 29343645
    419054 5w7f:A (2.8) BS01 CA 3.1.1.77 GO:0005509 ... O35298 29343645
    419055 5w7f:A (2.8) BS02 CA 3.1.1.77 GO:0005509 ... O35298 29343645
    419056 5w7f:A (2.8) BS03 CA 3.1.1.77 GO:0005509 ... O35298 29343645
    419057 5w7f:B (2.8) BS01 CA 3.1.1.77 GO:0005509 ... O35298 29343645
    419058 5w7f:B (2.8) BS02 CA 3.1.1.77 GO:0005509 ... O35298 29343645
    419059 5w7f:B (2.8) BS03 CA 3.1.1.77 GO:0005509 ... O35298 29343645
    419060 5w7g:A (4.5) BS01 dna ? GO:0003677 ... Q70LC6 28639939
    419061 5w7g:A (4.5) BS02 dna ? GO:0003677 ... Q70LC6 28639939
    419062 5w7g:B (4.5) BS01 dna ? GO:0003677 ... Q70LC7 28639939
    419063 5w7g:B (4.5) BS02 dna ? GO:0003677 ... Q70LC7 28639939
    419064 5w7g:C (4.5) BS01 dna ? GO:0003677 ... Q70LC6 28639939
    419065 5w7g:C (4.5) BS02 dna ? GO:0003677 ... Q70LC6 28639939
    419066 5w7g:D (4.5) BS01 dna ? GO:0003677 ... Q70LC7 28639939
    419067 5w7g:D (4.5) BS02 dna ? GO:0003677 ... Q70LC7 28639939
    419068 5w7g:E (4.5) BS01 dna ? GO:0003677 ... Q70LC6 28639939
    419069 5w7g:E (4.5) BS02 dna ? GO:0003677 ... Q70LC6 28639939
    419070 5w7g:F (4.5) BS01 dna ? GO:0003677 ... Q70LC7 28639939
    419071 5w7g:F (4.5) BS02 dna ? GO:0003677 ... Q70LC7 28639939
    419072 5w7g:G (4.5) BS01 dna ? GO:0003677 ... Q70LC6 28639939
    419073 5w7g:G (4.5) BS02 dna ? GO:0003677 ... Q70LC6 28639939
    419074 5w7g:H (4.5) BS01 dna ? GO:0003677 ... Q70LC7 28639939
    419075 5w7g:H (4.5) BS02 dna ? GO:0003677 ... Q70LC7 28639939
    419076 5w7g:I (4.5) BS01 dna ? GO:0003677 ... Q70LC6 28639939
    419077 5w7g:I (4.5) BS02 dna ? GO:0003677 ... Q70LC6 28639939
    419078 5w7g:J (4.5) BS01 dna ? GO:0003677 ... Q70LC7 28639939
    419079 5w7g:J (4.5) BS02 dna ? GO:0003677 ... Q70LC7 28639939
    419080 5w7g:K (4.5) BS01 dna ? GO:0003677 ... Q70LC6 28639939
    419081 5w7g:K (4.5) BS02 dna ? GO:0003677 ... Q70LC6 28639939
    419082 5w7g:L (4.5) BS01 dna ? GO:0003677 ... Q70LC7 28639939
    419083 5w7g:L (4.5) BS02 dna ? GO:0003677 ... Q70LC7 28639939
    419084 5w7g:M (4.5) BS01 dna ? GO:0003677 ... Q70LC6 28639939
    419085 5w7g:M (4.5) BS02 dna ? GO:0003677 ... Q70LC6 28639939
    419086 5w7g:N (4.5) BS01 dna ? GO:0003677 ... Q70LC7 28639939
    419087 5w7g:N (4.5) BS02 dna ? GO:0003677 ... Q70LC7 28639939
    419088 5w7g:O (4.5) BS01 dna ? GO:0003677 ... Q70LC6 28639939
    419089 5w7g:O (4.5) BS02 dna ? GO:0003677 ... Q70LC6 28639939
    419090 5w7g:P (4.5) BS01 dna ? GO:0003677 ... Q70LC7 28639939
    419091 5w7g:P (4.5) BS02 dna ? GO:0003677 ... Q70LC7 28639939
    419092 5w7g:Q (4.5) BS01 dna ? GO:0003677 ... Q70LC6 28639939
    419093 5w7g:Q (4.5) BS02 dna ? GO:0003677 ... Q70LC6 28639939
    419094 5w7g:R (4.5) BS01 dna ? GO:0003677 ... Q70LC7 28639939
    419095 5w7g:R (4.5) BS02 dna ? GO:0003677 ... Q70LC7 28639939
    419096 5w7g:S (4.5) BS01 dna ? GO:0003677 ... Q70LC6 28639939
    419097 5w7g:S (4.5) BS02 dna ? GO:0003677 ... Q70LC6 28639939
    419098 5w7g:T (4.5) BS01 dna ? GO:0003677 ... Q70LC7 28639939
    419099 5w7g:T (4.5) BS02 dna ? GO:0003677 ... Q70LC7 28639939
    419100 5w7g:U (4.5) BS01 dna ? GO:0003677 ... Q70LC6 28639939
    419101 5w7g:U (4.5) BS02 dna ? GO:0003677 ... Q70LC6 28639939
    419102 5w7g:V (4.5) BS01 dna ? GO:0003677 ... Q70LC7 28639939
    419103 5w7g:V (4.5) BS02 dna ? GO:0003677 ... Q70LC7 28639939
    419104 5w7g:W (4.5) BS01 dna ? GO:0003677 ... Q70LC6 28639939
    419105 5w7g:W (4.5) BS02 dna ? GO:0003677 ... Q70LC6 28639939
    419106 5w7g:X (4.5) BS01 dna ? GO:0003677 ... Q70LC7 28639939
    419107 5w7g:X (4.5) BS02 dna ? GO:0003677 ... Q70LC7 28639939
    419108 5w7g:Y (4.5) BS01 dna ? GO:0003677 ... Q70LC6 28639939
    419109 5w7g:Y (4.5) BS02 dna ? GO:0003677 ... Q70LC6 28639939
    419110 5w7g:Z (4.5) BS01 dna ? GO:0003677 ... Q70LC7 28639939
    419111 5w7g:Z (4.5) BS02 dna ? GO:0003677 ... Q70LC7 28639939
    419112 5w7g:a (4.5) BS01 dna ? GO:0003677 ... Q70LC6 28639939
    419113 5w7g:a (4.5) BS02 dna ? GO:0003677 ... Q70LC6 28639939
    419114 5w7g:b (4.5) BS01 dna ? GO:0003677 ... Q70LC7 28639939
    419115 5w7g:b (4.5) BS02 dna ? GO:0003677 ... Q70LC7 28639939
    419116 5w7g:c (4.5) BS01 dna ? GO:0003677 ... Q70LC6 28639939
    419117 5w7g:c (4.5) BS02 dna ? GO:0003677 ... Q70LC6 28639939
    419118 5w7g:d (4.5) BS01 dna ? GO:0003677 ... Q70LC7 28639939
    419119 5w7g:d (4.5) BS02 dna ? GO:0003677 ... Q70LC7 28639939
    419120 5w7g:e (4.5) BS01 dna ? GO:0003677 ... Q70LC6 28639939
    419121 5w7g:e (4.5) BS02 dna ? GO:0003677 ... Q70LC6 28639939
    419122 5w7g:f (4.5) BS01 dna ? GO:0003677 ... Q70LC7 28639939
    419123 5w7g:f (4.5) BS02 dna ? GO:0003677 ... Q70LC7 28639939
    419124 5w7g:g (4.5) BS01 dna ? GO:0003677 ... Q70LC6 28639939
    419125 5w7g:g (4.5) BS02 dna ? GO:0003677 ... Q70LC6 28639939
    419126 5w7g:h (4.5) BS01 dna ? GO:0003677 ... Q70LC7 28639939
    419127 5w7g:h (4.5) BS02 dna ? GO:0003677 ... Q70LC7 28639939
    419128 5w7g:i (4.5) BS01 dna ? GO:0003677 ... Q70LC6 28639939
    419129 5w7g:i (4.5) BS02 dna ? GO:0003677 ... Q70LC6 28639939
    419130 5w7g:j (4.5) BS01 dna ? GO:0003677 ... Q70LC7 28639939
    419131 5w7g:j (4.5) BS02 dna ? GO:0003677 ... Q70LC7 28639939
    419132 5w7g:k (4.5) BS01 dna ? GO:0003677 ... Q70LC6 28639939
    419133 5w7g:k (4.5) BS02 dna ? GO:0003677 ... Q70LC6 28639939
    419134 5w7g:l (4.5) BS01 dna ? GO:0003677 ... Q70LC7 28639939
    419135 5w7g:l (4.5) BS02 dna ? GO:0003677 ... Q70LC7 28639939
    419136 5w7g:m (4.5) BS01 dna ? GO:0003677 ... Q70LC6 28639939
    419137 5w7g:m (4.5) BS02 dna ? GO:0003677 ... Q70LC6 28639939
    419138 5w7g:n (4.5) BS01 dna ? GO:0003677 ... Q70LC7 28639939
    419139 5w7g:n (4.5) BS02 dna ? GO:0003677 ... Q70LC7 28639939
    419140 5w7g:o (4.5) BS01 dna ? GO:0003677 ... Q70LC6 28639939
    419141 5w7g:o (4.5) BS02 dna ? GO:0003677 ... Q70LC6 28639939
    419142 5w7g:p (4.5) BS01 dna ? GO:0003677 ... Q70LC7 28639939
    419143 5w7g:p (4.5) BS02 dna ? GO:0003677 ... Q70LC7 28639939
    419144 5w7h:A (2.75) BS01 ZN ? GO:0008270 ... Q93LD7 N/A
    419145 5w7h:A (2.75) BS02 ZN ? GO:0008270 ... Q93LD7 N/A
    419146 5w7h:B (2.75) BS01 ZN ? GO:0008270 ... Q93LD7 N/A
    419147 5w7h:B (2.75) BS02 ZN ? GO:0008270 ... Q93LD7 N/A
    419148 5w7i:A (2.105) BS01 peptide 2.3.1.-
    2.3.1.225
    N/A Q8IUH5 28757145
    419149 5w7i:A (2.105) BS02 peptide 2.3.1.-
    2.3.1.225
    N/A Q8IUH5 28757145
    419150 5w7i:C (2.105) BS01 peptide 2.3.1.-
    2.3.1.225
    N/A Q8IUH5 28757145
    419151 5w7i:C (2.105) BS02 peptide 2.3.1.-
    2.3.1.225
    N/A Q8IUH5 28757145
    419152 5w7j:A (2.202) BS01 peptide 2.3.1.-
    2.3.1.225
    N/A Q8IUH5 28757145
    419153 5w7j:A (2.202) BS02 peptide 2.3.1.-
    2.3.1.225
    N/A Q8IUH5 28757145
    419154 5w7j:C (2.202) BS01 peptide 2.3.1.-
    2.3.1.225
    N/A Q8IUH5 28757145
    419155 5w7j:C (2.202) BS02 peptide 2.3.1.-
    2.3.1.225
    N/A Q8IUH5 28757145
    419156 5w7k:A (1.994) BS01 SAH ? GO:0008168 ... A0A1B2TT18 30141817
    419157 5w7k:B (1.994) BS01 SAH ? GO:0008168 ... A0A1B2TT18 30141817
    419158 5w7m:A (1.7) BS01 SAH 3.1.1.- GO:0008168 ... B6HJU2 30141817
    419159 5w7n:A (1.8) BS01 rna 3.1.26.4 GO:0003676 ... Q9KEI9 N/A
    419160 5w7n:A (1.8) BS02 dna 3.1.26.4 GO:0003676 ... Q9KEI9 N/A
    419161 5w7n:A (1.8) BS03 MG 3.1.26.4 GO:0003676 ... Q9KEI9 N/A
    419162 5w7n:A (1.8) BS04 MG 3.1.26.4 GO:0003676 ... Q9KEI9 N/A
    419163 5w7o:A (1.75) BS01 rna 3.1.26.4 GO:0003676 ... Q9KEI9 N/A
    419164 5w7o:A (1.75) BS02 dna 3.1.26.4 GO:0003676 ... Q9KEI9 N/A
    419165 5w7o:A (1.75) BS03 MG 3.1.26.4 GO:0003676 ... Q9KEI9 N/A
    419166 5w7o:A (1.75) BS04 MG 3.1.26.4 GO:0003676 ... Q9KEI9 N/A
    419167 5w7p:A (2.4) BS01 SAM ? GO:0008168 ... A0A1B2TT09 30141817
    419168 5w7q:A (2.5) BS01 GDP N/A GO:0003746 ... N/A 29276038
    419169 5w7r:A (2.497) BS01 9Z7 ? GO:0008168 ... A0A1B2TT09 30141817
    419170 5w7r:A (2.497) BS02 SAH ? GO:0008168 ... A0A1B2TT09 30141817
    419171 5w7s:A (2.948) BS01 9Z1 ? GO:0008168 ... A0A1B2TT09 30141817
    419172 5w7s:A (2.948) BS02 SFG ? GO:0008168 ... A0A1B2TT09 30141817
    419173 5w7t:A (2.01) BS01 ANP 2.7.11.1 GO:0004672 ... Q9JIH7 N/A
    419174 5w7t:B (2.01) BS01 ANP 2.7.11.1 GO:0004672 ... Q9JIH7 N/A
    419175 5w7u:A (2.2) BS01 MN 3.1.-.- GO:0003723 ... C3W5S0 29215062
    419176 5w7u:A (2.2) BS02 MN 3.1.-.- GO:0003723 ... C3W5S0 29215062
    419177 5w7u:A (2.2) BS03 GY8 3.1.-.- GO:0003723 ... C3W5S0 29215062 MOAD: Ki=0.009uM
    419178 5w7x:A (2.005) BS01 peptide 3.1.-.- GO:0003906 ... Q8IW19 29059378
    419179 5w7x:B (2.005) BS01 peptide 3.1.-.- GO:0003906 ... Q8IW19 29059378
    419180 5w7x:C (2.005) BS01 peptide 3.1.-.- GO:0003906 ... Q8IW19 29059378
    419181 5w7x:C (2.005) BS02 peptide 3.1.-.- GO:0003906 ... Q8IW19 29059378
    419182 5w7x:D (2.005) BS01 peptide 3.1.-.- GO:0003906 ... Q8IW19 29059378
    419183 5w7y:A (2.1) BS01 peptide 3.1.-.- GO:0003906 ... Q8IW19 29059378
    419184 5w7y:B (2.1) BS01 peptide 3.1.-.- GO:0003906 ... Q8IW19 29059378
    419185 5w7y:B (2.1) BS02 peptide 3.1.-.- GO:0003906 ... Q8IW19 29059378
    419186 5w80:A (2.0) BS01 9XJ ? GO:0004672 ... Q9BJF5 N/A BindingDB: IC50=14nM
    419187 5w80:A (2.0) BS02 CA ? GO:0004672 ... Q9BJF5 N/A
    419188 5w81:A (3.37) BS01 ATP 5.6.1.6 GO:0002679 ... Q1LX78 28735752
    419189 5w81:A (3.37) BS02 ATP 5.6.1.6 GO:0002679 ... Q1LX78 28735752
    419190 5w81:A (3.37) BS03 MG 5.6.1.6 GO:0002679 ... Q1LX78 28735752
    419191 5w81:A (3.37) BS04 MG 5.6.1.6 GO:0002679 ... Q1LX78 28735752
    419192 5w83:B (1.554) BS01 ZN 3.4.19.12 GO:0008233 ... P43588 28844860
    419193 5w84:A (2.9) BS01 9YY 2.7.11.1 GO:0000287 ... Q9NWZ3 28947151 BindingDB: IC50=360nM
    419194 5w84:B (2.9) BS01 9YY 2.7.11.1 GO:0000287 ... Q9NWZ3 28947151 BindingDB: IC50=360nM
    419195 5w85:A (2.25) BS01 9YS 2.7.11.1 GO:0000287 ... Q9NWZ3 28947151 MOAD: ic50=10nM
    BindingDB: IC50=10.0nM
    419196 5w85:B (2.25) BS01 9YS 2.7.11.1 GO:0000287 ... Q9NWZ3 28947151 MOAD: ic50=10nM
    BindingDB: IC50=10.0nM
    419197 5w86:A (2.61) BS01 9YV 2.7.10.2 GO:0004672 ... P52333 28947151 BindingDB: IC50=2.0nM
    419198 5w86:B (2.61) BS01 9YV 2.7.10.2 GO:0004672 ... P52333 28947151 BindingDB: IC50=2.0nM
    419199 5w86:C (2.61) BS01 9YV 2.7.10.2 GO:0004672 ... P52333 28947151 BindingDB: IC50=2.0nM
    419200 5w86:D (2.61) BS01 9YV 2.7.10.2 GO:0004672 ... P52333 28947151 BindingDB: IC50=2.0nM

    Reference:
  • Chengxin Zhang, Xi Zhang, Lydia Freddolino, and Yang Zhang. BioLiP2: an updated structure database for biologically relevent ligand-protein interactions, Nucleic Acids Research, gkad630 (2023).
  • Jianyi Yang, Ambrish Roy, and Yang Zhang. BioLiP: a semi-manually curated database for biologically relevant ligand-protein interactions, Nucleic Acids Research, 41: D1096-D1103 (2013) (download the PDF file).