SEQ2FUN

BioLiP
Download all results in tab-seperated text for 942758 receptor-ligand interactions, whose format is explained at readme.txt.
  • Hover over PDB to view the title of the structure. Click PDB to view the structure at the RCSB PDB database. Resolution -1.00 means the resolution is unavailable, e.g., for NMR structures.
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  • Hover over EC number to view the full name of enzymatic activity.
  • Hover over GO terms to view all GO terms.
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    # PDB
    (Resolution Å)
    Site # Ligand EC number GO terms UniProt PubMed Binding
    affinity
    420001 5wel:C (4.4) BS02 AJP ? GO:0000149 ... D3Z7H4
    P19491
    28737760
    420002 5wel:D (4.4) BS01 ZK1 ? GO:0000149 ... D3Z7H4
    P19491
    28737760
    420003 5wen:A (6.8) BS01 AJP ? GO:0000149 ... D3Z7H4
    P19491
    28737760
    420004 5wen:C (6.8) BS01 AJP ? GO:0000149 ... D3Z7H4
    P19491
    28737760
    420005 5weo:A (4.2) BS01 GLU ? GO:0000149 ... O88602
    P19491
    28737760
    420006 5weo:A (4.2) BS02 CYZ ? GO:0000149 ... O88602
    P19491
    28737760
    420007 5weo:A (4.2) BS03 CYZ ? GO:0000149 ... O88602
    P19491
    28737760
    420008 5weo:B (4.2) BS01 GLU ? GO:0000149 ... O88602
    P19491
    28737760
    420009 5weo:B (4.2) BS02 CYZ ? GO:0000149 ... O88602
    P19491
    28737760
    420010 5weo:B (4.2) BS03 CYZ ? GO:0000149 ... O88602
    P19491
    28737760
    420011 5weo:C (4.2) BS01 CYZ ? GO:0000149 ... O88602
    P19491
    28737760
    420012 5weo:C (4.2) BS02 GLU ? GO:0000149 ... O88602
    P19491
    28737760
    420013 5weo:C (4.2) BS03 CYZ ? GO:0000149 ... O88602
    P19491
    28737760
    420014 5weo:D (4.2) BS01 CYZ ? GO:0000149 ... O88602
    P19491
    28737760
    420015 5weo:D (4.2) BS02 GLU ? GO:0000149 ... O88602
    P19491
    28737760
    420016 5weo:D (4.2) BS03 CYZ ? GO:0000149 ... O88602
    P19491
    28737760
    420017 5wep:A (3.502) BS01 A81 ? GO:0016740 ... D7UQM0 30642934
    420018 5wep:A (3.502) BS02 ZN ? GO:0016740 ... D7UQM0 30642934
    420019 5wep:A (3.502) BS03 A81 ? GO:0016740 ... D7UQM0 30642934
    420020 5wep:B (3.502) BS01 A81 ? GO:0016740 ... D7UQM0 30642934
    420021 5wep:B (3.502) BS02 A81 ? GO:0016740 ... D7UQM0 30642934
    420022 5wep:B (3.502) BS03 ZN ? GO:0016740 ... D7UQM0 30642934
    420023 5wes:A (2.706) BS01 peptide ? N/A P01900 29025991
    420024 5wes:A (2.706) BS02 LEU ? N/A P01900 29025991
    420025 5wet:A (2.64) BS01 peptide ? N/A P01900 29025991
    420026 5wet:A (2.64) BS02 GLY ? N/A P01900 29025991
    420027 5wet:A (2.64) BS03 LEU ? N/A P01900 29025991
    420028 5weu:A (1.584) BS01 peptide ? N/A P01900 29025991
    420029 5wev:A (1.854) BS01 9ZS 2.7.10.2 GO:0004672 ... O60674 28830649 MOAD: Ki=0.15uM
    420030 5wew:A (3.178) BS01 MN ? GO:0046872 ... W8UNW6 30642934
    420031 5wew:A (3.178) BS02 A81 ? GO:0046872 ... W8UNW6 30642934
    420032 5wew:A (3.178) BS03 A81 ? GO:0046872 ... W8UNW6 30642934
    420033 5wew:B (3.178) BS01 A81 ? GO:0046872 ... W8UNW6 30642934
    420034 5wew:B (3.178) BS02 MN ? GO:0046872 ... W8UNW6 30642934
    420035 5wew:B (3.178) BS03 A81 ? GO:0046872 ... W8UNW6 30642934
    420036 5wew:C (3.178) BS01 MN ? GO:0046872 ... W8UNW6 30642934
    420037 5wew:C (3.178) BS02 A81 ? GO:0046872 ... W8UNW6 30642934
    420038 5wew:C (3.178) BS03 A81 ? GO:0046872 ... W8UNW6 30642934
    420039 5wew:D (3.178) BS01 A81 ? GO:0046872 ... W8UNW6 30642934
    420040 5wew:D (3.178) BS02 MN ? GO:0046872 ... W8UNW6 30642934
    420041 5wew:D (3.178) BS03 A81 ? GO:0046872 ... W8UNW6 30642934
    420042 5wew:E (3.178) BS01 MN ? GO:0046872 ... W8UNW6 30642934
    420043 5wew:E (3.178) BS02 A81 ? GO:0046872 ... W8UNW6 30642934
    420044 5wew:E (3.178) BS03 A81 ? GO:0046872 ... W8UNW6 30642934
    420045 5wew:F (3.178) BS01 A81 ? GO:0046872 ... W8UNW6 30642934
    420046 5wew:F (3.178) BS02 MN ? GO:0046872 ... W8UNW6 30642934
    420047 5wew:F (3.178) BS03 A81 ? GO:0046872 ... W8UNW6 30642934
    420048 5wew:G (3.178) BS01 A81 ? GO:0046872 ... W8UNW6 30642934
    420049 5wew:G (3.178) BS02 MN ? GO:0046872 ... W8UNW6 30642934
    420050 5wew:G (3.178) BS03 A81 ? GO:0046872 ... W8UNW6 30642934
    420051 5wew:H (3.178) BS01 A81 ? GO:0046872 ... W8UNW6 30642934
    420052 5wew:H (3.178) BS02 A81 ? GO:0046872 ... W8UNW6 30642934
    420053 5wew:H (3.178) BS03 MN ? GO:0046872 ... W8UNW6 30642934
    420054 5wex:A (1.26) BS01 ZN 4.2.1.1
    4.2.1.69
    GO:0002009 ... P00918 28947945
    420055 5wex:A (1.26) BS02 8JS 4.2.1.1
    4.2.1.69
    GO:0002009 ... P00918 28947945 MOAD: Ki=66.3nM
    BindingDB: Ki=14nM
    420056 5wey:A (1.8) BS01 MAN ? N/A P02866 28846383
    420057 5wey:A (1.8) BS02 MN ? N/A P02866 28846383
    420058 5wey:A (1.8) BS03 CA ? N/A P02866 28846383
    420059 5wf0:0 (3.6) BS01 rna ? GO:0000027 ... P0A7N4 29733411
    420060 5wf0:1 (3.6) BS01 rna ? GO:0000027 ... P0A7N9 29733411
    420061 5wf0:2 (3.6) BS01 rna ? GO:0002181 ... P0A7P5 29733411
    420062 5wf0:3 (3.6) BS01 rna ? GO:0002181 ... P0A7Q1 29733411
    420063 5wf0:4 (3.6) BS01 rna ? GO:0002181 ... P0A7Q6 29733411
    420064 5wf0:5 (3.6) BS01 rna ? GO:0003735 ... P0A7J3 29733411
    420065 5wf0:6 (3.6) BS01 rna ? GO:0002181 ... P0A7M9 29733411
    420066 5wf0:C (3.6) BS01 rna ? GO:0000027 ... P60422 29733411
    420067 5wf0:D (3.6) BS01 rna ? GO:0000027 ... P60438 29733411
    420068 5wf0:D (3.6) BS02 MG ? GO:0000027 ... P60438 29733411
    420069 5wf0:E (3.6) BS01 rna ? GO:0001070 ... P60723 29733411
    420070 5wf0:F (3.6) BS01 rna ? GO:0000027 ... P62399 29733411
    420071 5wf0:F (3.6) BS02 rna ? GO:0000027 ... P62399 29733411
    420072 5wf0:F (3.6) BS03 rna ? GO:0000027 ... P62399 29733411
    420073 5wf0:G (3.6) BS01 rna ? GO:0000027 ... P0AG55 29733411
    420074 5wf0:H (3.6) BS01 rna ? GO:0002181 ... P0A7R1 29733411
    420075 5wf0:I (3.6) BS01 rna ? GO:0000027 ... P0A7J7 29733411
    420076 5wf0:I (3.6) BS02 rna ? GO:0000027 ... P0A7J7 29733411
    420077 5wf0:J (3.6) BS01 rna ? GO:0002181 ... P0AA10 29733411
    420078 5wf0:K (3.6) BS01 rna ? GO:0002181 ... P0ADY3 29733411
    420079 5wf0:K (3.6) BS02 rna ? GO:0002181 ... P0ADY3 29733411
    420080 5wf0:L (3.6) BS01 rna ? GO:0002181 ... P02413 29733411
    420081 5wf0:M (3.6) BS01 rna ? GO:0000027 ... P0ADY7 29733411
    420082 5wf0:M (3.6) BS02 rna ? GO:0000027 ... P0ADY7 29733411
    420083 5wf0:N (3.6) BS01 rna ? GO:0000027 ... P0AG44 29733411
    420084 5wf0:O (3.6) BS01 rna ? GO:0002181 ... P0C018 29733411
    420085 5wf0:O (3.6) BS02 rna ? GO:0002181 ... P0C018 29733411
    420086 5wf0:P (3.6) BS01 rna ? GO:0000027 ... P0A7K6 29733411
    420087 5wf0:P (3.6) BS02 rna ? GO:0000027 ... P0A7K6 29733411
    420088 5wf0:Q (3.6) BS01 rna ? GO:0000027 ... P0A7L3 29733411
    420089 5wf0:R (3.6) BS01 rna ? GO:0002181 ... P0AG48 29733411
    420090 5wf0:S (3.6) BS01 rna ? GO:0002181 ... P61175 29733411
    420091 5wf0:T (3.6) BS01 rna ? GO:0000027 ... P0ADZ0 29733411
    420092 5wf0:U (3.6) BS01 rna ? GO:0000027 ... P60624 29733411
    420093 5wf0:V (3.6) BS01 rna ? GO:0000027 ... P68919 29733411
    420094 5wf0:V (3.6) BS02 rna ? GO:0000027 ... P68919 29733411
    420095 5wf0:W (3.6) BS01 rna ? GO:0003735 ... P0A7L8 29733411
    420096 5wf0:W (3.6) BS02 rna ? GO:0003735 ... P0A7L8 29733411
    420097 5wf0:X (3.6) BS01 rna ? GO:0000027 ... P0A7M2 29733411
    420098 5wf0:Y (3.6) BS01 rna ? GO:0000027 ... P0A7M6 29733411
    420099 5wf0:Z (3.6) BS01 rna ? GO:0000027 ... P0AG51 29733411
    420100 5wf0:Z (3.6) BS02 rna ? GO:0000027 ... P0AG51 29733411
    420101 5wf0:b (3.6) BS01 rna ? GO:0000028 ... P0A7V0 29733411
    420102 5wf0:c (3.6) BS01 rna ? GO:0003676 ... P0A7V3 29733411
    420103 5wf0:d (3.6) BS01 rna ? GO:0000028 ... P0A7V8 29733411
    420104 5wf0:e (3.6) BS01 rna ? GO:0000028 ... P0A7W1 29733411
    420105 5wf0:f (3.6) BS01 rna ? GO:0003735 ... P02358 29733411
    420106 5wf0:g (3.6) BS01 rna ? GO:0003723 ... P02359 29733411
    420107 5wf0:g (3.6) BS02 rna ? GO:0003723 ... P02359 29733411
    420108 5wf0:h (3.6) BS01 rna ? GO:0000028 ... P0A7W7 29733411
    420109 5wf0:i (3.6) BS01 rna ? GO:0000049 ... P0A7X3 29733411
    420110 5wf0:j (3.6) BS01 rna ? GO:0000049 ... P0A7R5 29733411
    420111 5wf0:k (3.6) BS01 rna ? GO:0002181 ... P0A7R9 29733411
    420112 5wf0:l (3.6) BS01 rna ? GO:0000049 ... P0A7S3 29733411
    420113 5wf0:m (3.6) BS01 rna ? GO:0000049 ... P0A7S9 29733411
    420114 5wf0:m (3.6) BS02 rna ? GO:0000049 ... P0A7S9 29733411
    420115 5wf0:n (3.6) BS01 rna ? GO:0003735 ... P0AG59 29733411
    420116 5wf0:o (3.6) BS01 rna ? GO:0000028 ... P0ADZ4 29733411
    420117 5wf0:o (3.6) BS02 rna ? GO:0000028 ... P0ADZ4 29733411
    420118 5wf0:p (3.6) BS01 rna ? GO:0000028 ... P0A7T3 29733411
    420119 5wf0:q (3.6) BS01 rna ? GO:0000028 ... P0AG63 29733411
    420120 5wf0:r (3.6) BS01 rna ? GO:0003735 ... P0A7T7 29733411
    420121 5wf0:s (3.6) BS01 rna ? GO:0003723 ... P0A7U3 29733411
    420122 5wf0:t (3.6) BS01 rna ? GO:0000028 ... P0A7U7 29733411
    420123 5wf0:u (3.6) BS01 rna ? GO:0000028 ... P68679 29733411
    420124 5wf0:z (3.6) BS01 rna ? GO:0003723 ... P0CE48 29733411
    420125 5wf0:z (3.6) BS02 rna ? GO:0003723 ... P0CE48 29733411
    420126 5wf0:z (3.6) BS03 PHE ? GO:0003723 ... P0CE48 29733411
    420127 5wf0:z (3.6) BS04 GTP ? GO:0003723 ... P0CE48 29733411
    420128 5wf3:A (2.251) BS01 MN 3.1.-.- GO:0003723 ... C3W5S0 29215062
    420129 5wf3:A (2.251) BS02 MN 3.1.-.- GO:0003723 ... C3W5S0 29215062
    420130 5wf3:A (2.251) BS03 KU2 3.1.-.- GO:0003723 ... C3W5S0 29215062 MOAD: Ki=1.4uM
    420131 5wf5:A (2.6) BS01 UKA 3.2.1.17 GO:0003796 ... P00720
    P29274
    29395784
    420132 5wf6:A (2.9) BS01 UKA 3.2.1.17 GO:0003796 ... P00720
    P29274
    29395784
    420133 5wf7:B (2.5) BS01 ZN ? GO:0006338 ... G0RYC6
    G0SDW4
    29904056
    420134 5wf7:B (2.5) BS02 ZN ? GO:0006338 ... G0RYC6
    G0SDW4
    29904056
    420135 5wf7:B (2.5) BS03 ZN ? GO:0006338 ... G0RYC6
    G0SDW4
    29904056
    420136 5wf7:B (2.5) BS04 ZN ? GO:0006338 ... G0RYC6
    G0SDW4
    29904056
    420137 5wf7:B (2.5) BS05 ZN ? GO:0006338 ... G0RYC6
    G0SDW4
    29904056
    420138 5wf7:B (2.5) BS06 ZN ? GO:0006338 ... G0RYC6
    G0SDW4
    29904056
    420139 5wf7:B (2.5) BS07 ZN ? GO:0006338 ... G0RYC6
    G0SDW4
    29904056
    420140 5wf7:B (2.5) BS08 ZN ? GO:0006338 ... G0RYC6
    G0SDW4
    29904056
    420141 5wf7:B (2.5) BS09 A9G ? GO:0006338 ... G0RYC6
    G0SDW4
    29904056 MOAD: ic50=98.5uM
    420142 5wfc:A (2.282) BS01 peptide ? GO:0005634 ... G0S8H7 29904056
    420143 5wfc:B (2.282) BS01 ZN ? GO:0006338 ... G0RYC6
    G0SDW4
    29904056
    420144 5wfc:B (2.282) BS02 ZN ? GO:0006338 ... G0RYC6
    G0SDW4
    29904056
    420145 5wfc:B (2.282) BS03 ZN ? GO:0006338 ... G0RYC6
    G0SDW4
    29904056
    420146 5wfc:B (2.282) BS04 ZN ? GO:0006338 ... G0RYC6
    G0SDW4
    29904056
    420147 5wfc:B (2.282) BS05 ZN ? GO:0006338 ... G0RYC6
    G0SDW4
    29904056
    420148 5wfc:B (2.282) BS06 ZN ? GO:0006338 ... G0RYC6
    G0SDW4
    29904056
    420149 5wfc:B (2.282) BS07 ZN ? GO:0006338 ... G0RYC6
    G0SDW4
    29904056
    420150 5wfc:B (2.282) BS08 ZN ? GO:0006338 ... G0RYC6
    G0SDW4
    29904056
    420151 5wfc:B (2.282) BS09 A97 ? GO:0006338 ... G0RYC6
    G0SDW4
    29904056 MOAD: ic50=12.5uM
    420152 5wfd:B (2.654) BS01 ZN ? GO:0006338 ... G0RYC6
    G0SDW4
    29904056
    420153 5wfd:B (2.654) BS02 ZN ? GO:0006338 ... G0RYC6
    G0SDW4
    29904056
    420154 5wfd:B (2.654) BS03 ZN ? GO:0006338 ... G0RYC6
    G0SDW4
    29904056
    420155 5wfd:B (2.654) BS04 ZN ? GO:0006338 ... G0RYC6
    G0SDW4
    29904056
    420156 5wfd:B (2.654) BS05 ZN ? GO:0006338 ... G0RYC6
    G0SDW4
    29904056
    420157 5wfd:B (2.654) BS06 ZN ? GO:0006338 ... G0RYC6
    G0SDW4
    29904056
    420158 5wfd:B (2.654) BS07 ZN ? GO:0006338 ... G0RYC6
    G0SDW4
    29904056
    420159 5wfd:B (2.654) BS08 ZN ? GO:0006338 ... G0RYC6
    G0SDW4
    29904056
    420160 5wfd:B (2.654) BS09 A9G ? GO:0006338 ... G0RYC6
    G0SDW4
    29904056
    420161 5wfe:A (3.64) BS01 dna 3.1.-.- GO:0003676 ... Q46896 28729350
    420162 5wfe:A (3.64) BS02 dna 3.1.-.- GO:0003676 ... Q46896 28729350
    420163 5wfe:A (3.64) BS03 dna 3.1.-.- GO:0003676 ... Q46896 28729350
    420164 5wfe:A (3.64) BS04 dna 3.1.-.- GO:0003676 ... Q46896 28729350
    420165 5wfe:B (3.64) BS01 dna 3.1.-.- GO:0003676 ... Q46896 28729350
    420166 5wfe:B (3.64) BS02 dna 3.1.-.- GO:0003676 ... Q46896 28729350
    420167 5wfe:B (3.64) BS03 dna 3.1.-.- GO:0003676 ... Q46896 28729350
    420168 5wfe:B (3.64) BS04 dna 3.1.-.- GO:0003676 ... Q46896 28729350
    420169 5wfe:C (3.64) BS01 dna 3.1.-.- GO:0003676 ... Q46896 28729350
    420170 5wfe:C (3.64) BS02 dna 3.1.-.- GO:0003676 ... Q46896 28729350
    420171 5wfe:D (3.64) BS01 dna 3.1.-.- GO:0003676 ... Q46896 28729350
    420172 5wfe:E (3.64) BS01 dna 3.1.-.- GO:0003677 ... P45956 28729350
    420173 5wfe:E (3.64) BS02 dna 3.1.-.- GO:0003677 ... P45956 28729350
    420174 5wfe:F (3.64) BS01 dna 3.1.-.- GO:0003677 ... P45956 28729350
    420175 5wfe:F (3.64) BS02 dna 3.1.-.- GO:0003677 ... P45956 28729350
    420176 5wfe:K (3.64) BS01 dna ? GO:0000976 ... P0A6X7 28729350
    420177 5wfe:K (3.64) BS02 dna ? GO:0000976 ... P0A6X7 28729350
    420178 5wfe:L (3.64) BS01 dna ? GO:0003677 ... P0A6Y1 28729350
    420179 5wfe:L (3.64) BS02 dna ? GO:0003677 ... P0A6Y1 28729350
    420180 5wfg:A (2.9) BS01 UDP 2.4.1.187 GO:0009058 ... D3T4E0 31002736
    420181 5wfg:B (2.9) BS01 UDP 2.4.1.187 GO:0009058 ... D3T4E0 31002736
    420182 5wfg:C (2.9) BS01 UDP 2.4.1.187 GO:0009058 ... D3T4E0 31002736
    420183 5wfg:D (2.9) BS01 UDP 2.4.1.187 GO:0009058 ... D3T4E0 31002736
    420184 5wfg:E (2.9) BS01 UDP 2.4.1.187 GO:0009058 ... D3T4E0 31002736
    420185 5wfg:F (2.9) BS01 UDP 2.4.1.187 GO:0009058 ... D3T4E0 31002736
    420186 5wfi:A (1.851) BS01 ZN 2.1.1.56
    2.1.1.57
    2.7.7.48
    2.7.7.50
    3.1.13.-
    3.4.19.12
    3.4.22.-
    3.6.4.12
    3.6.4.13
    4.6.1.-
    GO:0006508 ... P0C6X9 N/A
    420187 5wfi:B (1.851) BS01 ZN 2.1.1.56
    2.1.1.57
    2.7.7.48
    2.7.7.50
    3.1.13.-
    3.4.19.12
    3.4.22.-
    3.6.4.12
    3.6.4.13
    4.6.1.-
    GO:0006508 ... P0C6X9 N/A
    420188 5wfj:A (2.48) BS01 9Z4 2.7.10.2 GO:0004672 ... P52333 28927786
    420189 5wfk:0 (3.4) BS01 rna ? GO:0000027 ... P0A7N4 29733411
    420190 5wfk:1 (3.4) BS01 rna ? GO:0000027 ... P0A7N9 29733411
    420191 5wfk:2 (3.4) BS01 rna ? GO:0002181 ... P0A7P5 29733411
    420192 5wfk:3 (3.4) BS01 rna ? GO:0002181 ... P0A7Q1 29733411
    420193 5wfk:4 (3.4) BS01 rna ? GO:0002181 ... P0A7Q6 29733411
    420194 5wfk:5 (3.4) BS01 rna ? GO:0003735 ... P0A7J3 29733411
    420195 5wfk:6 (3.4) BS01 rna ? GO:0002181 ... P0A7M9 29733411
    420196 5wfk:C (3.4) BS01 rna ? GO:0000027 ... P60422 29733411
    420197 5wfk:C (3.4) BS02 rna ? GO:0000027 ... P60422 29733411
    420198 5wfk:D (3.4) BS01 rna ? GO:0000027 ... P60438 29733411
    420199 5wfk:E (3.4) BS01 rna ? GO:0001070 ... P60723 29733411
    420200 5wfk:F (3.4) BS01 rna ? GO:0000027 ... P62399 29733411

    Reference:
  • Chengxin Zhang, Xi Zhang, Lydia Freddolino, and Yang Zhang. BioLiP2: an updated structure database for biologically relevent ligand-protein interactions, Nucleic Acids Research, gkad630 (2023).
  • Jianyi Yang, Ambrish Roy, and Yang Zhang. BioLiP: a semi-manually curated database for biologically relevant ligand-protein interactions, Nucleic Acids Research, 41: D1096-D1103 (2013) (download the PDF file).