SEQ2FUN

BioLiP
Download all results in tab-seperated text for 942758 receptor-ligand interactions, whose format is explained at readme.txt.
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    # PDB
    (Resolution Å)
    Site # Ligand EC number GO terms UniProt PubMed Binding
    affinity
    420401 5wgi:A (1.05) BS02 TSN ? N/A F8W4B7 29203661
    420402 5wgk:A (1.822) BS01 ZN ? N/A F8W4B7 29203661
    420403 5wgk:A (1.822) BS02 AGJ ? N/A F8W4B7 29203661
    420404 5wgl:A (1.7) BS01 ZN ? N/A F8W4B7 29203661
    420405 5wgl:A (1.7) BS02 AH4 ? N/A F8W4B7 29203661
    420406 5wgl:B (1.7) BS01 ZN ? N/A F8W4B7 29203661
    420407 5wgl:B (1.7) BS02 AH4 ? N/A F8W4B7 29203661
    420408 5wgm:A (1.75) BS01 ZN ? N/A F8W4B7 29203661
    420409 5wgm:A (1.75) BS02 AH7 ? N/A F8W4B7 29203661
    420410 5wgm:B (1.75) BS01 ZN ? N/A F8W4B7 29203661
    420411 5wgm:B (1.75) BS02 AH7 ? N/A F8W4B7 29203661
    420412 5wgm:B (1.75) BS03 AH7 ? N/A F8W4B7 29203661
    420413 5wgm:C (1.75) BS01 ZN ? N/A F8W4B7 29203661
    420414 5wgm:C (1.75) BS02 AH7 ? N/A F8W4B7 29203661
    420415 5wgp:A (1.53) BS01 ZN 4.2.1.1
    4.2.1.69
    GO:0002009 ... P00918 29266943
    420416 5wgp:A (1.53) BS02 AUD 4.2.1.1
    4.2.1.69
    GO:0002009 ... P00918 29266943 BindingDB: Ki=>20000nM
    420417 5wgp:A (1.53) BS03 AUD 4.2.1.1
    4.2.1.69
    GO:0002009 ... P00918 29266943 BindingDB: Ki=>20000nM
    420418 5wgp:A (1.53) BS04 AUD 4.2.1.1
    4.2.1.69
    GO:0002009 ... P00918 29266943 BindingDB: Ki=>20000nM
    420419 5wgq:A (2.3) BS01 peptide ? N/A P03372 29725689
    420420 5wgq:A (2.3) BS02 EST ? N/A P03372 29725689 BindingDB: IC50=1.3nM, Kd=0.2nM, EC50=0.75nM, Ki=0.21nM
    420421 5wgq:B (2.3) BS01 peptide ? N/A P03372 29725689
    420422 5wgq:B (2.3) BS02 EST ? N/A P03372 29725689 BindingDB: IC50=1.3nM, Kd=0.2nM, EC50=0.75nM, Ki=0.21nM
    420423 5wgr:A (2.362) BS01 FAD 1.14.-.- GO:0003824 ... L0E155 28777910
    420424 5wgr:A (2.362) BS02 ZN 1.14.-.- GO:0003824 ... L0E155 28777910
    420425 5wgr:A (2.362) BS03 PM7 1.14.-.- GO:0003824 ... L0E155 28777910
    420426 5wgr:A (2.362) BS04 PM7 1.14.-.- GO:0003824 ... L0E155 28777910
    420427 5wgs:A (2.34) BS01 FAD 1.14.-.- GO:0003824 ... L0E155 28777910
    420428 5wgs:A (2.34) BS02 ZN 1.14.-.- GO:0003824 ... L0E155 28777910
    420429 5wgs:A (2.34) BS03 PM7 1.14.-.- GO:0003824 ... L0E155 28777910
    420430 5wgt:A (2.093) BS01 FAD 1.14.-.- GO:0003824 ... L0E155 28777910
    420431 5wgt:A (2.093) BS02 ZN 1.14.-.- GO:0003824 ... L0E155 28777910
    420432 5wgt:A (2.093) BS03 PM7 1.14.-.- GO:0003824 ... L0E155 28777910
    420433 5wgt:A (2.093) BS04 PM7 1.14.-.- GO:0003824 ... L0E155 28777910
    420434 5wgu:A (2.052) BS01 FAD 1.14.-.- GO:0003824 ... L0E155 28777910
    420435 5wgu:A (2.052) BS02 ZN 1.14.-.- GO:0003824 ... L0E155 28777910
    420436 5wgu:A (2.052) BS03 PM7 1.14.-.- GO:0003824 ... L0E155 28777910
    420437 5wgv:A (2.3) BS01 FAD 1.14.-.- GO:0003824 ... L0E155 28777910
    420438 5wgv:A (2.3) BS02 ZN 1.14.-.- GO:0003824 ... L0E155 28777910
    420439 5wgv:A (2.3) BS03 PM7 1.14.-.- GO:0003824 ... L0E155 28777910
    420440 5wgv:A (2.3) BS04 PM7 1.14.-.- GO:0003824 ... L0E155 28777910
    420441 5wgw:A (2.092) BS01 FAD 1.14.-.- GO:0003824 ... L0E155 28777910
    420442 5wgw:A (2.092) BS02 ZN 1.14.-.- GO:0003824 ... L0E155 28777910
    420443 5wgw:A (2.092) BS03 MB5 1.14.-.- GO:0003824 ... L0E155 28777910
    420444 5wgw:A (2.092) BS04 MB5 1.14.-.- GO:0003824 ... L0E155 28777910
    420445 5wgx:A (1.973) BS01 FAD 1.14.-.- GO:0003824 ... L0E155 28777910
    420446 5wgx:A (1.973) BS02 ZN 1.14.-.- GO:0003824 ... L0E155 28777910
    420447 5wgx:A (1.973) BS03 MB5 1.14.-.- GO:0003824 ... L0E155 28777910
    420448 5wgx:A (1.973) BS04 MB5 1.14.-.- GO:0003824 ... L0E155 28777910
    420449 5wgy:A (2.0) BS01 FAD 1.14.-.- GO:0003824 ... L0E155 28777910
    420450 5wgy:A (2.0) BS02 ZN 1.14.-.- GO:0003824 ... L0E155 28777910
    420451 5wgy:A (2.0) BS03 MB5 1.14.-.- GO:0003824 ... L0E155 28777910
    420452 5wgy:A (2.0) BS04 MB5 1.14.-.- GO:0003824 ... L0E155 28777910
    420453 5wgz:A (2.041) BS01 FAD 1.14.-.- GO:0003824 ... L0E155 28777910
    420454 5wgz:A (2.041) BS02 ZN 1.14.-.- GO:0003824 ... L0E155 28777910
    420455 5wgz:A (2.041) BS03 IM7 1.14.-.- GO:0003824 ... L0E155 28777910
    420456 5wgz:A (2.041) BS04 IM7 1.14.-.- GO:0003824 ... L0E155 28777910
    420457 5wh5:A (1.8) BS01 R91 3.1.4.53 GO:0004114 ... Q08499 29975048
    420458 5wh5:A (1.8) BS02 ZN 3.1.4.53 GO:0004114 ... Q08499 29975048
    420459 5wh5:A (1.8) BS03 MG 3.1.4.53 GO:0004114 ... Q08499 29975048
    420460 5wh5:B (1.8) BS01 R91 3.1.4.53 GO:0004114 ... Q08499 29975048
    420461 5wh5:B (1.8) BS02 ZN 3.1.4.53 GO:0004114 ... Q08499 29975048
    420462 5wh6:A (1.6) BS01 AKJ 3.1.4.53 GO:0004114 ... Q08499 29975048 BindingDB: IC50=18nM
    420463 5wh6:A (1.6) BS02 ZN 3.1.4.53 GO:0004114 ... Q08499 29975048
    420464 5wh6:A (1.6) BS03 MG 3.1.4.53 GO:0004114 ... Q08499 29975048
    420465 5wh6:B (1.6) BS01 AKJ 3.1.4.53 GO:0004114 ... Q08499 29975048 BindingDB: IC50=18nM
    420466 5wh6:B (1.6) BS02 ZN 3.1.4.53 GO:0004114 ... Q08499 29975048
    420467 5wha:A (2.04) BS01 GDP 3.6.5.2 GO:0003924 ... P01116 29282294
    420468 5wha:A (2.04) BS02 CA 3.6.5.2 GO:0003924 ... P01116 29282294
    420469 5wha:D (2.04) BS01 peptide 3.6.5.2 GO:0003924 ... P01116 29282294
    420470 5wha:D (2.04) BS02 GDP 3.6.5.2 GO:0003924 ... P01116 29282294
    420471 5wha:D (2.04) BS03 CA 3.6.5.2 GO:0003924 ... P01116 29282294
    420472 5wha:F (2.04) BS01 peptide N/A N/A N/A 29282294
    420473 5wha:G (2.04) BS01 GDP 3.6.5.2 GO:0003924 ... P01116 29282294
    420474 5wha:G (2.04) BS02 CA 3.6.5.2 GO:0003924 ... P01116 29282294
    420475 5wha:I (2.04) BS01 peptide N/A N/A N/A 29282294
    420476 5wha:I (2.04) BS02 CA N/A N/A N/A 29282294
    420477 5wha:J (2.04) BS01 peptide 3.6.5.2 GO:0003924 ... P01116 29282294
    420478 5wha:J (2.04) BS02 CA 3.6.5.2 GO:0003924 ... P01116 29282294
    420479 5wha:J (2.04) BS03 GDP 3.6.5.2 GO:0003924 ... P01116 29282294
    420480 5wha:L (2.04) BS01 peptide N/A N/A N/A 29282294
    420481 5wha:L (2.04) BS02 CA N/A N/A N/A 29282294
    420482 5whb:A (2.18) BS01 peptide 3.6.5.2 GO:0003924 ... P01116 29282294
    420483 5whb:A (2.18) BS02 GDP 3.6.5.2 GO:0003924 ... P01116 29282294
    420484 5whb:A (2.18) BS03 CA 3.6.5.2 GO:0003924 ... P01116 29282294
    420485 5whb:C (2.18) BS01 CA N/A N/A N/A 29282294
    420486 5whb:D (2.18) BS01 GDP 3.6.5.2 GO:0003924 ... P01116 29282294
    420487 5whb:D (2.18) BS02 CA 3.6.5.2 GO:0003924 ... P01116 29282294
    420488 5whb:F (2.18) BS01 CA N/A N/A N/A 29282294
    420489 5whb:G (2.18) BS01 peptide 3.6.5.2 GO:0003924 ... P01116 29282294
    420490 5whb:G (2.18) BS02 GDP 3.6.5.2 GO:0003924 ... P01116 29282294
    420491 5whb:I (2.18) BS01 peptide N/A N/A N/A 29282294
    420492 5whb:J (2.18) BS01 peptide 3.6.5.2 GO:0003924 ... P01116 29282294
    420493 5whb:J (2.18) BS02 GDP 3.6.5.2 GO:0003924 ... P01116 29282294
    420494 5whb:L (2.18) BS01 peptide N/A N/A N/A 29282294
    420495 5whc:A (2.548) BS01 AJJ 3.4.19.12 GO:0004843 ... Q93009 29166018 BindingDB: IC50=79200nM, Kd=12000nM
    420496 5whc:B (2.548) BS01 AJJ 3.4.19.12 GO:0004843 ... Q93009 29166018 BindingDB: IC50=79200nM, Kd=12000nM
    420497 5whd:A (1.641) BS01 GDP 3.6.5.2 GO:0003924 ... P01116 29282294
    420498 5whd:B (1.641) BS01 GDP 3.6.5.2 GO:0003924 ... P01116 29282294
    420499 5whd:C (1.641) BS01 GDP 3.6.5.2 GO:0003924 ... P01116 29282294
    420500 5whd:D (1.641) BS01 GDP 3.6.5.2 GO:0003924 ... P01116 29282294
    420501 5whe:A (1.91) BS01 GNP 3.6.5.2 GO:0003924 ... P01116 29282294
    420502 5whe:A (1.91) BS02 CA 3.6.5.2 GO:0003924 ... P01116 29282294
    420503 5whe:D (1.91) BS01 GNP 3.6.5.2 GO:0003924 ... P01116 29282294
    420504 5whe:D (1.91) BS02 CA 3.6.5.2 GO:0003924 ... P01116 29282294
    420505 5whe:F (1.91) BS01 CA N/A N/A N/A 29282294
    420506 5whe:G (1.91) BS01 GNP 3.6.5.2 GO:0003924 ... P01116 29282294
    420507 5whe:G (1.91) BS02 CA 3.6.5.2 GO:0003924 ... P01116 29282294
    420508 5whe:J (1.91) BS01 GNP 3.6.5.2 GO:0003924 ... P01116 29282294
    420509 5whg:A (2.7) BS01 ZN 3.1.-.- N/A Q04311 29149595
    420510 5whh:A (2.38) BS01 peptide ? GO:0042981 ... Q16548 29276033
    420511 5whk:A (2.5) BS01 NHE ? N/A P55899 28878017
    420512 5whk:A (2.5) BS02 NHE ? N/A P55899 28878017
    420513 5whl:A (2.5) BS01 HPP ? N/A Q14145 31851823
    420514 5whm:A (1.95) BS01 CA N/A GO:0003677 ... N/A 29567835
    420515 5who:A (2.23) BS01 AO7 ? N/A Q14145 31851823
    420516 5whq:A (2.9) BS01 HEM 1.11.1.21 GO:0004096 ... Q8X182 29305053
    420517 5whq:B (2.9) BS01 HEM 1.11.1.21 GO:0004096 ... Q8X182 29305053
    420518 5whr:A (2.28) BS01 HEM 1.13.11.52 GO:0002376 ... P14902 29111717
    420519 5whr:A (2.28) BS02 AOJ 1.13.11.52 GO:0002376 ... P14902 29111717 MOAD: ic50=0.12uM
    BindingDB: IC50=410nM, Kd=14000nM
    420520 5whr:B (2.28) BS01 HEM 1.13.11.52 GO:0002376 ... P14902 29111717
    420521 5whr:B (2.28) BS02 AOJ 1.13.11.52 GO:0002376 ... P14902 29111717 MOAD: ic50=0.12uM
    BindingDB: IC50=410nM, Kd=14000nM
    420522 5whs:A (2.6) BS01 HEM 1.11.1.21 GO:0004096 ... Q8X182 29305053
    420523 5whs:B (2.6) BS01 HEM 1.11.1.21 GO:0004096 ... Q8X182 29305053
    420524 5wht:A (1.932) BS01 SIA ? GO:0005576 ... Q8Z6A3 28993610
    420525 5wht:B (1.932) BS01 SIA ? GO:0005576 ... Q8Z6A3 28993610
    420526 5wht:C (1.932) BS01 SIA ? GO:0005576 ... Q8Z6A3 28993610
    420527 5wht:D (1.932) BS01 SIA ? GO:0005576 ... Q8Z6A3 28993610
    420528 5whu:A (2.2) BS01 SIA ? N/A Q404H3 28993610
    420529 5whu:A (2.2) BS02 SIA ? N/A Q404H3 28993610
    420530 5whu:C (2.2) BS01 SIA ? N/A Q404H3 28993610
    420531 5whu:D (2.2) BS01 SIA ? N/A Q404H3 28993610
    420532 5whu:E (2.2) BS01 SIA ? N/A Q404H3 28993610
    420533 5whu:E (2.2) BS02 SIA ? N/A Q404H3 28993610
    420534 5whu:H (2.2) BS01 SIA ? N/A Q404H3 28993610
    420535 5whu:I (2.2) BS01 SIA ? N/A Q404H3 28993610
    420536 5whu:I (2.2) BS02 SIA ? N/A Q404H3 28993610
    420537 5whu:J (2.2) BS01 SIA ? N/A Q404H3 28993610
    420538 5whv:F (2.303) BS01 CA ? N/A Q404H3 28993610
    420539 5whw:A (1.71) BS01 CA 3.4.21.64 GO:0004252 ... P06873 30289409
    420540 5whw:A (1.71) BS02 CA 3.4.21.64 GO:0004252 ... P06873 30289409
    420541 5whx:A (1.69) BS01 NAP 1.3.1.13 GO:0000166 ... I1MYY4 28671678
    420542 5whx:B (1.69) BS01 NAP 1.3.1.13 GO:0000166 ... I1MYY4 28671678
    420543 5why:A (2.692) BS01 SF4 ? GO:0003824 ... A3DDW1 28704043
    420544 5why:A (2.692) BS02 SF4 ? GO:0003824 ... A3DDW1 28704043
    420545 5why:A (2.692) BS03 SF4 ? GO:0003824 ... A3DDW1 28704043
    420546 5why:A (2.692) BS04 SAM ? GO:0003824 ... A3DDW1 28704043
    420547 5why:A (2.692) BS05 CA ? GO:0003824 ... A3DDW1 28704043
    420548 5why:B (2.692) BS01 SF4 ? GO:0003824 ... A3DDW1 28704043
    420549 5why:B (2.692) BS02 SF4 ? GO:0003824 ... A3DDW1 28704043
    420550 5why:B (2.692) BS03 SF4 ? GO:0003824 ... A3DDW1 28704043
    420551 5why:B (2.692) BS04 SAM ? GO:0003824 ... A3DDW1 28704043
    420552 5why:B (2.692) BS05 CA ? GO:0003824 ... A3DDW1 28704043
    420553 5wi0:A (2.05) BS01 AQ1 2.4.2.12 GO:0005125 ... P43490 29287958 MOAD: ic50=360uM
    BindingDB: IC50=360000nM
    420554 5wi0:A (2.05) BS02 AQ1 2.4.2.12 GO:0005125 ... P43490 29287958 MOAD: ic50=360uM
    BindingDB: IC50=360000nM
    420555 5wi0:B (2.05) BS01 AQ1 2.4.2.12 GO:0005125 ... P43490 29287958 MOAD: ic50=360uM
    BindingDB: IC50=360000nM
    420556 5wi0:B (2.05) BS02 AQ1 2.4.2.12 GO:0005125 ... P43490 29287958 MOAD: ic50=360uM
    BindingDB: IC50=360000nM
    420557 5wi1:A (1.99) BS01 AOY 2.4.2.12 GO:0005125 ... P43490 29287958 MOAD: ic50=10uM
    BindingDB: IC50=10000nM
    420558 5wi1:A (1.99) BS02 AOY 2.4.2.12 GO:0005125 ... P43490 29287958 MOAD: ic50=10uM
    BindingDB: IC50=10000nM
    420559 5wi1:B (1.99) BS01 AOY 2.4.2.12 GO:0005125 ... P43490 29287958 MOAD: ic50=10uM
    BindingDB: IC50=10000nM
    420560 5wi1:B (1.99) BS02 AOY 2.4.2.12 GO:0005125 ... P43490 29287958 MOAD: ic50=10uM
    BindingDB: IC50=10000nM
    420561 5wi3:A (1.81) BS01 CEF 3.5.2.6 GO:0005886 ... I6YCI1 29229762
    420562 5wi3:B (1.81) BS01 CEF 3.5.2.6 GO:0005886 ... I6YCI1 29229762
    420563 5wi5:A (2.0) BS01 0V5 2.5.1.7 GO:0003824 ... Q97NQ4 N/A
    420564 5wi5:A (2.0) BS02 EPU 2.5.1.7 GO:0003824 ... Q97NQ4 N/A
    420565 5wi5:B (2.0) BS01 0V5 2.5.1.7 GO:0003824 ... Q97NQ4 N/A
    420566 5wi5:B (2.0) BS02 EPU 2.5.1.7 GO:0003824 ... Q97NQ4 N/A
    420567 5wi5:C (2.0) BS01 0V5 2.5.1.7 GO:0003824 ... Q97NQ4 N/A
    420568 5wi5:C (2.0) BS02 EPU 2.5.1.7 GO:0003824 ... Q97NQ4 N/A
    420569 5wi5:D (2.0) BS01 0V5 2.5.1.7 GO:0003824 ... Q97NQ4 N/A
    420570 5wi5:D (2.0) BS02 EPU 2.5.1.7 GO:0003824 ... Q97NQ4 N/A
    420571 5wi6:A (2.72) BS01 0GJ 3.4.21.59 GO:0004252 ... Q15661 29661938
    420572 5wi6:B (2.72) BS01 0GJ 3.4.21.59 GO:0004252 ... Q15661 29661938
    420573 5wi6:C (2.72) BS01 0GJ 3.4.21.59 GO:0004252 ... Q15661 29661938
    420574 5wi6:D (2.72) BS01 0GJ 3.4.21.59 GO:0004252 ... Q15661 29661938
    420575 5wi7:A (1.861) BS01 4J6 3.5.2.6 GO:0005886 ... I6YCI1 29229762
    420576 5wi7:B (1.861) BS01 4J6 3.5.2.6 GO:0005886 ... I6YCI1 29229762
    420577 5wib:A (1.87) BS01 ID1 3.5.2.1 GO:0005886 ... I6YCI1 29229762
    420578 5wib:B (1.87) BS01 ID1 3.5.2.1 GO:0005886 ... I6YCI1 29229762
    420579 5wic:B (2.55) BS01 FOA ? GO:0016020 ... Q17U16 29097752
    420580 5wic:B (2.55) BS02 FOA ? GO:0016020 ... Q17U16 29097752
    420581 5wid:A (1.681) BS01 FMN ? GO:0000166 ... Q8TPV5 31801875
    420582 5wid:A (1.681) BS02 ACT ? GO:0000166 ... Q8TPV5 31801875
    420583 5wid:B (1.681) BS01 FMN ? GO:0000166 ... Q8TPV5 31801875
    420584 5wid:C (1.681) BS01 FMN ? GO:0000166 ... Q8TPV5 31801875
    420585 5wie:A (3.3) BS01 NAP 1.1.1.- GO:0002244 ... P62483 28846092
    420586 5wie:B (3.3) BS01 PGW ? GO:0005216 ... P63142 28846092
    420587 5wie:B (3.3) BS02 PGW ? GO:0005216 ... P63142 28846092
    420588 5wie:G (3.3) BS01 NAP 1.1.1.- GO:0002244 ... P62483 28846092
    420589 5wie:H (3.3) BS01 PGW ? GO:0005216 ... P63142 28846092
    420590 5wig:A (1.4) BS01 ZN 3.5.2.6 GO:0008270 ... C7C422 28965402
    420591 5wig:A (1.4) BS02 ZN 3.5.2.6 GO:0008270 ... C7C422 28965402
    420592 5wig:B (1.4) BS01 ZN 3.5.2.6 GO:0008270 ... C7C422 28965402
    420593 5wig:B (1.4) BS02 ZN 3.5.2.6 GO:0008270 ... C7C422 28965402
    420594 5wih:A (1.35) BS01 ZN 3.5.2.6 N/A A0A024FRL9 28965402
    420595 5wih:A (1.35) BS02 ZN 3.5.2.6 N/A A0A024FRL9 28965402
    420596 5wii:A (2.79) BS01 AO4 ? GO:0016020 ... Q17U16 29097752
    420597 5wij:A (2.04) BS01 AQG 2.7.10.2 GO:0004672 ... O60674 30763067
    420598 5wik:B (2.6) BS01 584 2.7.10.2 GO:0004672 ... O60674 30763067 BindingDB: Kd=620nM
    420599 5wil:A (2.2) BS01 YDJ 2.7.10.2 GO:0004672 ... O60674 30763067
    420600 5wim:A (2.55) BS01 35R 2.7.10.2 GO:0004672 ... O60674 30763067 BindingDB: Kd=11nM

    Reference:
  • Chengxin Zhang, Xi Zhang, Lydia Freddolino, and Yang Zhang. BioLiP2: an updated structure database for biologically relevent ligand-protein interactions, Nucleic Acids Research, gkad630 (2023).
  • Jianyi Yang, Ambrish Roy, and Yang Zhang. BioLiP: a semi-manually curated database for biologically relevant ligand-protein interactions, Nucleic Acids Research, 41: D1096-D1103 (2013) (download the PDF file).