SEQ2FUN

BioLiP
Download all results in tab-seperated text for 942758 receptor-ligand interactions, whose format is explained at readme.txt.
  • Hover over PDB to view the title of the structure. Click PDB to view the structure at the RCSB PDB database. Resolution -1.00 means the resolution is unavailable, e.g., for NMR structures.
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  • Hover over Ligand to view the full ligand name. Click Ligand to view the 2D diagram and other detail information of the ligand.
  • Hover over EC number to view the full name of enzymatic activity.
  • Hover over GO terms to view all GO terms.
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    # PDB
    (Resolution Å)
    Site # Ligand EC number GO terms UniProt PubMed Binding
    affinity
    420601 5win:A (2.38) BS01 SKE 2.7.10.2 GO:0004672 ... O60674 30763067 BindingDB: Kd=220nM, IC50=2960nM, Ki=220000nM
    420602 5wio:A (2.52) BS01 XXE ? GO:0016020 ... Q17U16 29097752
    420603 5wip:A (2.62) BS01 XXO ? GO:0016020 ... Q17U16 29097752
    420604 5wir:A (2.1) BS01 peptide ? GO:0042162 ... P54274 29083414
    420605 5wir:B (2.1) BS01 peptide ? GO:0042162 ... P54274 29083414
    420606 5wis:10 (2.703) BS01 rna ? GO:0003735 ... P60493 28934499
    420607 5wis:10 (2.703) BS02 rna ? GO:0003735 ... P60493 28934499
    420608 5wis:10 (2.703) BS03 MG ? GO:0003735 ... P60493 28934499
    420609 5wis:10 (2.703) BS04 MG ? GO:0003735 ... P60493 28934499
    420610 5wis:10 (2.703) BS05 MG ? GO:0003735 ... P60493 28934499
    420611 5wis:11 (2.703) BS01 rna ? GO:0003735 ... P60494 28934499
    420612 5wis:11 (2.703) BS02 MG ? GO:0003735 ... P60494 28934499
    420613 5wis:12 (2.703) BS01 rna ? GO:0003735 ... Q5SHP6 28934499
    420614 5wis:12 (2.703) BS02 MG ? GO:0003735 ... Q5SHP6 28934499
    420615 5wis:13 (2.703) BS01 rna ? GO:0003735 ... Q5SHQ6 28934499
    420616 5wis:13 (2.703) BS02 rna ? GO:0003735 ... Q5SHQ6 28934499
    420617 5wis:13 (2.703) BS03 MG ? GO:0003735 ... Q5SHQ6 28934499
    420618 5wis:13 (2.703) BS04 MG ? GO:0003735 ... Q5SHQ6 28934499
    420619 5wis:14 (2.703) BS01 rna ? GO:0003735 ... Q5SJE1 28934499
    420620 5wis:14 (2.703) BS02 ZN ? GO:0003735 ... Q5SJE1 28934499
    420621 5wis:15 (2.703) BS01 rna ? GO:0003735 ... P80339 28934499
    420622 5wis:15 (2.703) BS02 ZN ? GO:0003735 ... P80339 28934499
    420623 5wis:16 (2.703) BS01 rna ? GO:0000049 ... P35871 28934499
    420624 5wis:16 (2.703) BS02 MG ? GO:0000049 ... P35871 28934499
    420625 5wis:16 (2.703) BS03 ZN ? GO:0000049 ... P35871 28934499
    420626 5wis:16 (2.703) BS04 MG ? GO:0000049 ... P35871 28934499
    420627 5wis:17 (2.703) BS01 rna ? GO:0003735 ... P80340 28934499
    420628 5wis:17 (2.703) BS02 MG ? GO:0003735 ... P80340 28934499
    420629 5wis:17 (2.703) BS03 MG ? GO:0003735 ... P80340 28934499
    420630 5wis:18 (2.703) BS01 rna ? GO:0003735 ... P80341 28934499
    420631 5wis:18 (2.703) BS02 MG ? GO:0003735 ... P80341 28934499
    420632 5wis:18 (2.703) BS03 MG ? GO:0003735 ... P80341 28934499
    420633 5wis:18 (2.703) BS04 MG ? GO:0003735 ... P80341 28934499
    420634 5wis:19 (2.703) BS01 rna ? GO:0003735 ... Q5SHR2 28934499
    420635 5wis:19 (2.703) BS02 ZN ? GO:0003735 ... Q5SHR2 28934499
    420636 5wis:1D (2.703) BS01 rna ? GO:0002181 ... P60405 28934499
    420637 5wis:1D (2.703) BS02 rna ? GO:0002181 ... P60405 28934499
    420638 5wis:1D (2.703) BS03 MG ? GO:0002181 ... P60405 28934499
    420639 5wis:1D (2.703) BS04 MG ? GO:0002181 ... P60405 28934499
    420640 5wis:1D (2.703) BS05 MG ? GO:0002181 ... P60405 28934499
    420641 5wis:1D (2.703) BS06 MG ? GO:0002181 ... P60405 28934499
    420642 5wis:1D (2.703) BS07 MG ? GO:0002181 ... P60405 28934499
    420643 5wis:1D (2.703) BS08 MG ? GO:0002181 ... P60405 28934499
    420644 5wis:1D (2.703) BS09 MG ? GO:0002181 ... P60405 28934499
    420645 5wis:1D (2.703) BS10 MG ? GO:0002181 ... P60405 28934499
    420646 5wis:1D (2.703) BS11 MG ? GO:0002181 ... P60405 28934499
    420647 5wis:1E (2.703) BS01 rna ? GO:0003735 ... Q5SHN8 28934499
    420648 5wis:1E (2.703) BS02 MG ? GO:0003735 ... Q5SHN8 28934499
    420649 5wis:1E (2.703) BS03 MG ? GO:0003735 ... Q5SHN8 28934499
    420650 5wis:1E (2.703) BS04 MG ? GO:0003735 ... Q5SHN8 28934499
    420651 5wis:1F (2.703) BS01 rna ? GO:0003735 ... Q5SHN9 28934499
    420652 5wis:1F (2.703) BS02 MG ? GO:0003735 ... Q5SHN9 28934499
    420653 5wis:1F (2.703) BS03 MG ? GO:0003735 ... Q5SHN9 28934499
    420654 5wis:1F (2.703) BS04 MG ? GO:0003735 ... Q5SHN9 28934499
    420655 5wis:1F (2.703) BS05 MG ? GO:0003735 ... Q5SHN9 28934499
    420656 5wis:1F (2.703) BS06 MG ? GO:0003735 ... Q5SHN9 28934499
    420657 5wis:1F (2.703) BS07 MG ? GO:0003735 ... Q5SHN9 28934499
    420658 5wis:1G (2.703) BS01 rna ? GO:0000049 ... Q5SHQ0 28934499
    420659 5wis:1G (2.703) BS02 rna ? GO:0000049 ... Q5SHQ0 28934499
    420660 5wis:1G (2.703) BS03 rna ? GO:0000049 ... Q5SHQ0 28934499
    420661 5wis:1G (2.703) BS04 MG ? GO:0000049 ... Q5SHQ0 28934499
    420662 5wis:1G (2.703) BS05 MG ? GO:0000049 ... Q5SHQ0 28934499
    420663 5wis:1H (2.703) BS01 rna ? GO:0002181 ... P0DOY8 28934499
    420664 5wis:1I (2.703) BS01 rna ? GO:0003735 ... Q5SLQ1 28934499
    420665 5wis:1N (2.703) BS01 rna ? GO:0003729 ... P60488 28934499
    420666 5wis:1N (2.703) BS02 MG ? GO:0003729 ... P60488 28934499
    420667 5wis:1N (2.703) BS03 MG ? GO:0003729 ... P60488 28934499
    420668 5wis:1N (2.703) BS04 MG ? GO:0003729 ... P60488 28934499
    420669 5wis:1N (2.703) BS05 MG ? GO:0003729 ... P60488 28934499
    420670 5wis:1O (2.703) BS01 rna ? GO:0003735 ... Q5SHP8 28934499
    420671 5wis:1O (2.703) BS02 rna ? GO:0003735 ... Q5SHP8 28934499
    420672 5wis:1O (2.703) BS03 MG ? GO:0003735 ... Q5SHP8 28934499
    420673 5wis:1O (2.703) BS04 MG ? GO:0003735 ... Q5SHP8 28934499
    420674 5wis:1P (2.703) BS01 rna ? GO:0003735 ... Q5SHQ7 28934499
    420675 5wis:1P (2.703) BS02 MG ? GO:0003735 ... Q5SHQ7 28934499
    420676 5wis:1P (2.703) BS03 MG ? GO:0003735 ... Q5SHQ7 28934499
    420677 5wis:1P (2.703) BS04 MG ? GO:0003735 ... Q5SHQ7 28934499
    420678 5wis:1P (2.703) BS05 MG ? GO:0003735 ... Q5SHQ7 28934499
    420679 5wis:1P (2.703) BS06 MG ? GO:0003735 ... Q5SHQ7 28934499
    420680 5wis:1Q (2.703) BS01 rna ? GO:0000049 ... P60489 28934499
    420681 5wis:1Q (2.703) BS02 rna ? GO:0000049 ... P60489 28934499
    420682 5wis:1Q (2.703) BS03 rna ? GO:0000049 ... P60489 28934499
    420683 5wis:1Q (2.703) BS04 MG ? GO:0000049 ... P60489 28934499
    420684 5wis:1Q (2.703) BS05 MG ? GO:0000049 ... P60489 28934499
    420685 5wis:1Q (2.703) BS06 MG ? GO:0000049 ... P60489 28934499
    420686 5wis:1Q (2.703) BS07 MG ? GO:0000049 ... P60489 28934499
    420687 5wis:1Q (2.703) BS08 MG ? GO:0000049 ... P60489 28934499
    420688 5wis:1R (2.703) BS01 rna ? GO:0003735 ... Q9Z9H5 28934499
    420689 5wis:1R (2.703) BS02 MG ? GO:0003735 ... Q9Z9H5 28934499
    420690 5wis:1R (2.703) BS03 MG ? GO:0003735 ... Q9Z9H5 28934499
    420691 5wis:1S (2.703) BS01 rna ? GO:0003735 ... Q5SHQ4 28934499
    420692 5wis:1S (2.703) BS02 rna ? GO:0003735 ... Q5SHQ4 28934499
    420693 5wis:1S (2.703) BS03 MG ? GO:0003735 ... Q5SHQ4 28934499
    420694 5wis:1S (2.703) BS04 MG ? GO:0003735 ... Q5SHQ4 28934499
    420695 5wis:1T (2.703) BS01 rna ? GO:0003735 ... P60490 28934499
    420696 5wis:1T (2.703) BS02 rna ? GO:0003735 ... P60490 28934499
    420697 5wis:1U (2.703) BS01 rna ? GO:0000027 ... P60491 28934499
    420698 5wis:1U (2.703) BS02 MG ? GO:0000027 ... P60491 28934499
    420699 5wis:1U (2.703) BS03 MG ? GO:0000027 ... P60491 28934499
    420700 5wis:1U (2.703) BS04 MG ? GO:0000027 ... P60491 28934499
    420701 5wis:1U (2.703) BS05 MG ? GO:0000027 ... P60491 28934499
    420702 5wis:1U (2.703) BS06 MG ? GO:0000027 ... P60491 28934499
    420703 5wis:1U (2.703) BS07 MG ? GO:0000027 ... P60491 28934499
    420704 5wis:1U (2.703) BS08 MG ? GO:0000027 ... P60491 28934499
    420705 5wis:1V (2.703) BS01 rna ? GO:0003723 ... P60492 28934499
    420706 5wis:1V (2.703) BS02 MG ? GO:0003723 ... P60492 28934499
    420707 5wis:1V (2.703) BS03 MG ? GO:0003723 ... P60492 28934499
    420708 5wis:1V (2.703) BS04 MG ? GO:0003723 ... P60492 28934499
    420709 5wis:1V (2.703) BS05 MG ? GO:0003723 ... P60492 28934499
    420710 5wis:1V (2.703) BS06 MG ? GO:0003723 ... P60492 28934499
    420711 5wis:1W (2.703) BS01 rna ? GO:0003735 ... Q5SHP3 28934499
    420712 5wis:1W (2.703) BS02 MG ? GO:0003735 ... Q5SHP3 28934499
    420713 5wis:1W (2.703) BS03 MG ? GO:0003735 ... Q5SHP3 28934499
    420714 5wis:1W (2.703) BS04 MG ? GO:0003735 ... Q5SHP3 28934499
    420715 5wis:1W (2.703) BS05 MG ? GO:0003735 ... Q5SHP3 28934499
    420716 5wis:1W (2.703) BS06 MG ? GO:0003735 ... Q5SHP3 28934499
    420717 5wis:1X (2.703) BS01 rna ? GO:0003735 ... Q5SHP0 28934499
    420718 5wis:1X (2.703) BS02 MG ? GO:0003735 ... Q5SHP0 28934499
    420719 5wis:1X (2.703) BS03 MG ? GO:0003735 ... Q5SHP0 28934499
    420720 5wis:1X (2.703) BS04 MG ? GO:0003735 ... Q5SHP0 28934499
    420721 5wis:1X (2.703) BS05 MG ? GO:0003735 ... Q5SHP0 28934499
    420722 5wis:1X (2.703) BS06 MG ? GO:0003735 ... Q5SHP0 28934499
    420723 5wis:1Y (2.703) BS01 rna ? GO:0003723 ... Q5SHP9 28934499
    420724 5wis:1Y (2.703) BS02 ZN ? GO:0003723 ... Q5SHP9 28934499
    420725 5wis:1Y (2.703) BS03 MG ? GO:0003723 ... Q5SHP9 28934499
    420726 5wis:1Z (2.703) BS01 rna ? GO:0003723 ... Q5SHZ1 28934499
    420727 5wis:1Z (2.703) BS02 rna ? GO:0003723 ... Q5SHZ1 28934499
    420728 5wis:1Z (2.703) BS03 MG ? GO:0003723 ... Q5SHZ1 28934499
    420729 5wis:1b (2.703) BS01 rna ? GO:0003735 ... P80371 28934499
    420730 5wis:1b (2.703) BS02 MG ? GO:0003735 ... P80371 28934499
    420731 5wis:1c (2.703) BS01 rna ? GO:0003676 ... P80372 28934499
    420732 5wis:1d (2.703) BS01 rna ? GO:0003723 ... P80373 28934499
    420733 5wis:1d (2.703) BS02 SF4 ? GO:0003723 ... P80373 28934499
    420734 5wis:1e (2.703) BS01 rna ? GO:0003723 ... Q5SHQ5 28934499
    420735 5wis:1e (2.703) BS02 MG ? GO:0003723 ... Q5SHQ5 28934499
    420736 5wis:1e (2.703) BS03 MG ? GO:0003723 ... Q5SHQ5 28934499
    420737 5wis:1f (2.703) BS01 rna ? GO:0003735 ... Q5SLP8 28934499
    420738 5wis:1f (2.703) BS02 MG ? GO:0003735 ... Q5SLP8 28934499
    420739 5wis:1g (2.703) BS01 rna ? GO:0000049 ... P17291 28934499
    420740 5wis:1g (2.703) BS02 rna ? GO:0000049 ... P17291 28934499
    420741 5wis:1h (2.703) BS01 rna ? GO:0003735 ... P0DOY9 28934499
    420742 5wis:1i (2.703) BS01 rna ? GO:0000049 ... P80374 28934499
    420743 5wis:1i (2.703) BS02 rna ? GO:0000049 ... P80374 28934499
    420744 5wis:1j (2.703) BS01 rna ? GO:0000049 ... Q5SHN7 28934499
    420745 5wis:1k (2.703) BS01 rna ? GO:0003735 ... P80376 28934499
    420746 5wis:1k (2.703) BS02 MG ? GO:0003735 ... P80376 28934499
    420747 5wis:1l (2.703) BS01 rna ? GO:0000049 ... Q5SHN3 28934499
    420748 5wis:1l (2.703) BS02 rna ? GO:0000049 ... Q5SHN3 28934499
    420749 5wis:1m (2.703) BS01 rna ? GO:0000049 ... P80377 28934499
    420750 5wis:1m (2.703) BS02 rna ? GO:0000049 ... P80377 28934499
    420751 5wis:1m (2.703) BS03 MG ? GO:0000049 ... P80377 28934499
    420752 5wis:1n (2.703) BS01 rna ? GO:0003735 ... P0DOY6 28934499
    420753 5wis:1n (2.703) BS02 ZN ? GO:0003735 ... P0DOY6 28934499
    420754 5wis:1n (2.703) BS03 MG ? GO:0003735 ... P0DOY6 28934499
    420755 5wis:1o (2.703) BS01 rna ? GO:0003735 ... Q5SJ76 28934499
    420756 5wis:1o (2.703) BS02 rna ? GO:0003735 ... Q5SJ76 28934499
    420757 5wis:1p (2.703) BS01 rna ? GO:0003735 ... Q5SJH3 28934499
    420758 5wis:1q (2.703) BS01 rna ? GO:0003735 ... P0DOY7 28934499
    420759 5wis:1r (2.703) BS01 rna ? GO:0003735 ... Q5SLQ0 28934499
    420760 5wis:1s (2.703) BS01 rna ? GO:0000028 ... Q5SHP2 28934499
    420761 5wis:1t (2.703) BS01 rna ? GO:0003723 ... P80380 28934499
    420762 5wis:1t (2.703) BS02 MG ? GO:0003723 ... P80380 28934499
    420763 5wis:20 (2.703) BS01 rna ? GO:0003735 ... P60493 28934499
    420764 5wis:20 (2.703) BS02 rna ? GO:0003735 ... P60493 28934499
    420765 5wis:21 (2.703) BS01 rna ? GO:0003735 ... P60494 28934499
    420766 5wis:21 (2.703) BS02 rna ? GO:0003735 ... P60494 28934499
    420767 5wis:22 (2.703) BS01 rna ? GO:0003735 ... Q5SHP6 28934499
    420768 5wis:23 (2.703) BS01 rna ? GO:0003735 ... Q5SHQ6 28934499
    420769 5wis:23 (2.703) BS02 rna ? GO:0003735 ... Q5SHQ6 28934499
    420770 5wis:23 (2.703) BS03 MG ? GO:0003735 ... Q5SHQ6 28934499
    420771 5wis:23 (2.703) BS04 MG ? GO:0003735 ... Q5SHQ6 28934499
    420772 5wis:24 (2.703) BS01 rna ? GO:0003735 ... Q5SJE1 28934499
    420773 5wis:24 (2.703) BS02 ZN ? GO:0003735 ... Q5SJE1 28934499
    420774 5wis:25 (2.703) BS01 rna ? GO:0003735 ... P80339 28934499
    420775 5wis:25 (2.703) BS02 MG ? GO:0003735 ... P80339 28934499
    420776 5wis:25 (2.703) BS03 MG ? GO:0003735 ... P80339 28934499
    420777 5wis:25 (2.703) BS04 ZN ? GO:0003735 ... P80339 28934499
    420778 5wis:26 (2.703) BS01 rna ? GO:0000049 ... P35871 28934499
    420779 5wis:26 (2.703) BS02 ZN ? GO:0000049 ... P35871 28934499
    420780 5wis:26 (2.703) BS03 MG ? GO:0000049 ... P35871 28934499
    420781 5wis:27 (2.703) BS01 rna ? GO:0003735 ... P80340 28934499
    420782 5wis:27 (2.703) BS02 MG ? GO:0003735 ... P80340 28934499
    420783 5wis:28 (2.703) BS01 rna ? GO:0003735 ... P80341 28934499
    420784 5wis:29 (2.703) BS01 rna ? GO:0003735 ... Q5SHR2 28934499
    420785 5wis:29 (2.703) BS02 ZN ? GO:0003735 ... Q5SHR2 28934499
    420786 5wis:2D (2.703) BS01 rna ? GO:0002181 ... P60405 28934499
    420787 5wis:2D (2.703) BS02 rna ? GO:0002181 ... P60405 28934499
    420788 5wis:2D (2.703) BS03 MG ? GO:0002181 ... P60405 28934499
    420789 5wis:2D (2.703) BS04 MG ? GO:0002181 ... P60405 28934499
    420790 5wis:2D (2.703) BS05 MG ? GO:0002181 ... P60405 28934499
    420791 5wis:2D (2.703) BS06 MG ? GO:0002181 ... P60405 28934499
    420792 5wis:2D (2.703) BS07 MG ? GO:0002181 ... P60405 28934499
    420793 5wis:2E (2.703) BS01 rna ? GO:0003735 ... Q5SHN8 28934499
    420794 5wis:2E (2.703) BS02 MG ? GO:0003735 ... Q5SHN8 28934499
    420795 5wis:2F (2.703) BS01 rna ? GO:0003735 ... Q5SHN9 28934499
    420796 5wis:2F (2.703) BS02 MG ? GO:0003735 ... Q5SHN9 28934499
    420797 5wis:2F (2.703) BS03 MG ? GO:0003735 ... Q5SHN9 28934499
    420798 5wis:2G (2.703) BS01 rna ? GO:0000049 ... Q5SHQ0 28934499
    420799 5wis:2G (2.703) BS02 rna ? GO:0000049 ... Q5SHQ0 28934499
    420800 5wis:2G (2.703) BS03 rna ? GO:0000049 ... Q5SHQ0 28934499

    Reference:
  • Chengxin Zhang, Xi Zhang, Lydia Freddolino, and Yang Zhang. BioLiP2: an updated structure database for biologically relevent ligand-protein interactions, Nucleic Acids Research, gkad630 (2023).
  • Jianyi Yang, Ambrish Roy, and Yang Zhang. BioLiP: a semi-manually curated database for biologically relevant ligand-protein interactions, Nucleic Acids Research, 41: D1096-D1103 (2013) (download the PDF file).