SEQ2FUN

BioLiP
Download all results in tab-seperated text for 942758 receptor-ligand interactions, whose format is explained at readme.txt.
  • Hover over PDB to view the title of the structure. Click PDB to view the structure at the RCSB PDB database. Resolution -1.00 means the resolution is unavailable, e.g., for NMR structures.
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  • Hover over Ligand to view the full ligand name. Click Ligand to view the 2D diagram and other detail information of the ligand.
  • Hover over EC number to view the full name of enzymatic activity.
  • Hover over GO terms to view all GO terms.
  • Hover over UniProt to view the protein name.
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    # PDB
    (Resolution Å)
    Site # Ligand EC number GO terms UniProt PubMed Binding
    affinity
    420801 5wis:2H (2.703) BS01 rna ? GO:0002181 ... P0DOY8 28934499
    420802 5wis:2I (2.703) BS01 rna ? GO:0003735 ... Q5SLQ1 28934499
    420803 5wis:2N (2.703) BS01 rna ? GO:0003729 ... P60488 28934499
    420804 5wis:2O (2.703) BS01 rna ? GO:0003735 ... Q5SHP8 28934499
    420805 5wis:2O (2.703) BS02 rna ? GO:0003735 ... Q5SHP8 28934499
    420806 5wis:2P (2.703) BS01 rna ? GO:0003735 ... Q5SHQ7 28934499
    420807 5wis:2Q (2.703) BS01 rna ? GO:0000049 ... P60489 28934499
    420808 5wis:2Q (2.703) BS02 rna ? GO:0000049 ... P60489 28934499
    420809 5wis:2Q (2.703) BS03 rna ? GO:0000049 ... P60489 28934499
    420810 5wis:2Q (2.703) BS04 MG ? GO:0000049 ... P60489 28934499
    420811 5wis:2Q (2.703) BS05 MG ? GO:0000049 ... P60489 28934499
    420812 5wis:2Q (2.703) BS06 MG ? GO:0000049 ... P60489 28934499
    420813 5wis:2R (2.703) BS01 rna ? GO:0003735 ... Q9Z9H5 28934499
    420814 5wis:2S (2.703) BS01 rna ? GO:0003735 ... Q5SHQ4 28934499
    420815 5wis:2S (2.703) BS02 rna ? GO:0003735 ... Q5SHQ4 28934499
    420816 5wis:2T (2.703) BS01 rna ? GO:0003735 ... P60490 28934499
    420817 5wis:2T (2.703) BS02 rna ? GO:0003735 ... P60490 28934499
    420818 5wis:2U (2.703) BS01 rna ? GO:0000027 ... P60491 28934499
    420819 5wis:2U (2.703) BS02 MG ? GO:0000027 ... P60491 28934499
    420820 5wis:2U (2.703) BS03 MG ? GO:0000027 ... P60491 28934499
    420821 5wis:2U (2.703) BS04 MG ? GO:0000027 ... P60491 28934499
    420822 5wis:2V (2.703) BS01 rna ? GO:0003723 ... P60492 28934499
    420823 5wis:2V (2.703) BS02 MG ? GO:0003723 ... P60492 28934499
    420824 5wis:2V (2.703) BS03 MG ? GO:0003723 ... P60492 28934499
    420825 5wis:2V (2.703) BS04 MG ? GO:0003723 ... P60492 28934499
    420826 5wis:2W (2.703) BS01 rna ? GO:0003735 ... Q5SHP3 28934499
    420827 5wis:2W (2.703) BS02 MG ? GO:0003735 ... Q5SHP3 28934499
    420828 5wis:2W (2.703) BS03 MG ? GO:0003735 ... Q5SHP3 28934499
    420829 5wis:2X (2.703) BS01 rna ? GO:0003735 ... Q5SHP0 28934499
    420830 5wis:2X (2.703) BS02 MG ? GO:0003735 ... Q5SHP0 28934499
    420831 5wis:2Y (2.703) BS01 rna ? GO:0003723 ... Q5SHP9 28934499
    420832 5wis:2Y (2.703) BS02 ZN ? GO:0003723 ... Q5SHP9 28934499
    420833 5wis:2Z (2.703) BS01 rna ? GO:0003723 ... Q5SHZ1 28934499
    420834 5wis:2Z (2.703) BS02 rna ? GO:0003723 ... Q5SHZ1 28934499
    420835 5wis:2Z (2.703) BS03 MG ? GO:0003723 ... Q5SHZ1 28934499
    420836 5wis:2b (2.703) BS01 rna ? GO:0003735 ... P80371 28934499
    420837 5wis:2c (2.703) BS01 rna ? GO:0003676 ... P80372 28934499
    420838 5wis:2d (2.703) BS01 rna ? GO:0003723 ... P80373 28934499
    420839 5wis:2d (2.703) BS02 SF4 ? GO:0003723 ... P80373 28934499
    420840 5wis:2e (2.703) BS01 rna ? GO:0003723 ... Q5SHQ5 28934499
    420841 5wis:2e (2.703) BS02 MG ? GO:0003723 ... Q5SHQ5 28934499
    420842 5wis:2f (2.703) BS01 rna ? GO:0003735 ... Q5SLP8 28934499
    420843 5wis:2f (2.703) BS02 MG ? GO:0003735 ... Q5SLP8 28934499
    420844 5wis:2g (2.703) BS01 rna ? GO:0000049 ... P17291 28934499
    420845 5wis:2g (2.703) BS02 rna ? GO:0000049 ... P17291 28934499
    420846 5wis:2h (2.703) BS01 rna ? GO:0003735 ... P0DOY9 28934499
    420847 5wis:2i (2.703) BS01 rna ? GO:0000049 ... P80374 28934499
    420848 5wis:2i (2.703) BS02 rna ? GO:0000049 ... P80374 28934499
    420849 5wis:2j (2.703) BS01 rna ? GO:0000049 ... Q5SHN7 28934499
    420850 5wis:2k (2.703) BS01 rna ? GO:0003735 ... P80376 28934499
    420851 5wis:2k (2.703) BS02 MG ? GO:0003735 ... P80376 28934499
    420852 5wis:2l (2.703) BS01 rna ? GO:0000049 ... Q5SHN3 28934499
    420853 5wis:2l (2.703) BS02 rna ? GO:0000049 ... Q5SHN3 28934499
    420854 5wis:2l (2.703) BS03 MG ? GO:0000049 ... Q5SHN3 28934499
    420855 5wis:2l (2.703) BS04 MG ? GO:0000049 ... Q5SHN3 28934499
    420856 5wis:2m (2.703) BS01 rna ? GO:0000049 ... P80377 28934499
    420857 5wis:2m (2.703) BS02 rna ? GO:0000049 ... P80377 28934499
    420858 5wis:2n (2.703) BS01 rna ? GO:0003735 ... P0DOY6 28934499
    420859 5wis:2n (2.703) BS02 ZN ? GO:0003735 ... P0DOY6 28934499
    420860 5wis:2o (2.703) BS01 rna ? GO:0003735 ... Q5SJ76 28934499
    420861 5wis:2o (2.703) BS02 rna ? GO:0003735 ... Q5SJ76 28934499
    420862 5wis:2p (2.703) BS01 rna ? GO:0003735 ... Q5SJH3 28934499
    420863 5wis:2q (2.703) BS01 rna ? GO:0003735 ... P0DOY7 28934499
    420864 5wis:2q (2.703) BS02 MG ? GO:0003735 ... P0DOY7 28934499
    420865 5wis:2q (2.703) BS03 MG ? GO:0003735 ... P0DOY7 28934499
    420866 5wis:2r (2.703) BS01 rna ? GO:0003735 ... Q5SLQ0 28934499
    420867 5wis:2s (2.703) BS01 rna ? GO:0000028 ... Q5SHP2 28934499
    420868 5wis:2t (2.703) BS01 rna ? GO:0003723 ... P80380 28934499
    420869 5wis:2t (2.703) BS02 MG ? GO:0003723 ... P80380 28934499
    420870 5wit:10 (2.6) BS01 rna ? GO:0003735 ... P60493 28934499
    420871 5wit:10 (2.6) BS02 rna ? GO:0003735 ... P60493 28934499
    420872 5wit:10 (2.6) BS03 rna ? GO:0003735 ... P60493 28934499
    420873 5wit:10 (2.6) BS04 MG ? GO:0003735 ... P60493 28934499
    420874 5wit:10 (2.6) BS05 MG ? GO:0003735 ... P60493 28934499
    420875 5wit:10 (2.6) BS06 MG ? GO:0003735 ... P60493 28934499
    420876 5wit:11 (2.6) BS01 rna ? GO:0003735 ... P60494 28934499
    420877 5wit:11 (2.6) BS02 rna ? GO:0003735 ... P60494 28934499
    420878 5wit:11 (2.6) BS03 MG ? GO:0003735 ... P60494 28934499
    420879 5wit:11 (2.6) BS04 MG ? GO:0003735 ... P60494 28934499
    420880 5wit:12 (2.6) BS01 rna ? GO:0003735 ... Q5SHP6 28934499
    420881 5wit:12 (2.6) BS02 MG ? GO:0003735 ... Q5SHP6 28934499
    420882 5wit:13 (2.6) BS01 rna ? GO:0003735 ... Q5SHQ6 28934499
    420883 5wit:13 (2.6) BS02 rna ? GO:0003735 ... Q5SHQ6 28934499
    420884 5wit:13 (2.6) BS03 MG ? GO:0003735 ... Q5SHQ6 28934499
    420885 5wit:13 (2.6) BS04 MG ? GO:0003735 ... Q5SHQ6 28934499
    420886 5wit:13 (2.6) BS05 MG ? GO:0003735 ... Q5SHQ6 28934499
    420887 5wit:14 (2.6) BS01 rna ? GO:0003735 ... Q5SJE1 28934499
    420888 5wit:14 (2.6) BS02 ZN ? GO:0003735 ... Q5SJE1 28934499
    420889 5wit:15 (2.6) BS01 rna ? GO:0003735 ... P80339 28934499
    420890 5wit:15 (2.6) BS02 MG ? GO:0003735 ... P80339 28934499
    420891 5wit:15 (2.6) BS03 MG ? GO:0003735 ... P80339 28934499
    420892 5wit:15 (2.6) BS04 MG ? GO:0003735 ... P80339 28934499
    420893 5wit:15 (2.6) BS05 MG ? GO:0003735 ... P80339 28934499
    420894 5wit:15 (2.6) BS06 ZN ? GO:0003735 ... P80339 28934499
    420895 5wit:15 (2.6) BS07 MG ? GO:0003735 ... P80339 28934499
    420896 5wit:16 (2.6) BS01 rna ? GO:0000049 ... P35871 28934499
    420897 5wit:16 (2.6) BS02 MG ? GO:0000049 ... P35871 28934499
    420898 5wit:16 (2.6) BS03 ZN ? GO:0000049 ... P35871 28934499
    420899 5wit:16 (2.6) BS04 MG ? GO:0000049 ... P35871 28934499
    420900 5wit:17 (2.6) BS01 rna ? GO:0003735 ... P80340 28934499
    420901 5wit:17 (2.6) BS02 MG ? GO:0003735 ... P80340 28934499
    420902 5wit:17 (2.6) BS03 MG ? GO:0003735 ... P80340 28934499
    420903 5wit:18 (2.6) BS01 rna ? GO:0003735 ... Q5SKU1 28934499
    420904 5wit:18 (2.6) BS02 MG ? GO:0003735 ... Q5SKU1 28934499
    420905 5wit:18 (2.6) BS03 MG ? GO:0003735 ... Q5SKU1 28934499
    420906 5wit:19 (2.6) BS01 rna ? GO:0003735 ... Q5SHR2 28934499
    420907 5wit:19 (2.6) BS02 MG ? GO:0003735 ... Q5SHR2 28934499
    420908 5wit:19 (2.6) BS03 ZN ? GO:0003735 ... Q5SHR2 28934499
    420909 5wit:1D (2.6) BS01 rna ? GO:0002181 ... P60405 28934499
    420910 5wit:1D (2.6) BS02 rna ? GO:0002181 ... P60405 28934499
    420911 5wit:1D (2.6) BS03 MG ? GO:0002181 ... P60405 28934499
    420912 5wit:1D (2.6) BS04 MG ? GO:0002181 ... P60405 28934499
    420913 5wit:1D (2.6) BS05 MG ? GO:0002181 ... P60405 28934499
    420914 5wit:1D (2.6) BS06 MG ? GO:0002181 ... P60405 28934499
    420915 5wit:1D (2.6) BS07 MG ? GO:0002181 ... P60405 28934499
    420916 5wit:1D (2.6) BS08 MG ? GO:0002181 ... P60405 28934499
    420917 5wit:1D (2.6) BS09 MG ? GO:0002181 ... P60405 28934499
    420918 5wit:1D (2.6) BS10 MG ? GO:0002181 ... P60405 28934499
    420919 5wit:1D (2.6) BS11 MG ? GO:0002181 ... P60405 28934499
    420920 5wit:1D (2.6) BS12 MG ? GO:0002181 ... P60405 28934499
    420921 5wit:1D (2.6) BS13 MG ? GO:0002181 ... P60405 28934499
    420922 5wit:1E (2.6) BS01 rna ? GO:0003735 ... Q5SHN8 28934499
    420923 5wit:1E (2.6) BS02 MG ? GO:0003735 ... Q5SHN8 28934499
    420924 5wit:1E (2.6) BS03 MG ? GO:0003735 ... Q5SHN8 28934499
    420925 5wit:1E (2.6) BS04 MG ? GO:0003735 ... Q5SHN8 28934499
    420926 5wit:1E (2.6) BS05 MG ? GO:0003735 ... Q5SHN8 28934499
    420927 5wit:1E (2.6) BS06 MG ? GO:0003735 ... Q5SHN8 28934499
    420928 5wit:1F (2.6) BS01 rna ? GO:0003735 ... Q5SHN9 28934499
    420929 5wit:1F (2.6) BS02 MG ? GO:0003735 ... Q5SHN9 28934499
    420930 5wit:1F (2.6) BS03 MG ? GO:0003735 ... Q5SHN9 28934499
    420931 5wit:1F (2.6) BS04 MG ? GO:0003735 ... Q5SHN9 28934499
    420932 5wit:1F (2.6) BS05 MG ? GO:0003735 ... Q5SHN9 28934499
    420933 5wit:1F (2.6) BS06 MG ? GO:0003735 ... Q5SHN9 28934499
    420934 5wit:1F (2.6) BS07 MG ? GO:0003735 ... Q5SHN9 28934499
    420935 5wit:1F (2.6) BS08 MG ? GO:0003735 ... Q5SHN9 28934499
    420936 5wit:1F (2.6) BS09 MG ? GO:0003735 ... Q5SHN9 28934499
    420937 5wit:1F (2.6) BS10 MG ? GO:0003735 ... Q5SHN9 28934499
    420938 5wit:1F (2.6) BS11 MG ? GO:0003735 ... Q5SHN9 28934499
    420939 5wit:1F (2.6) BS12 MG ? GO:0003735 ... Q5SHN9 28934499
    420940 5wit:1F (2.6) BS13 MG ? GO:0003735 ... Q5SHN9 28934499
    420941 5wit:1G (2.6) BS01 rna ? GO:0000049 ... Q5SHQ0 28934499
    420942 5wit:1G (2.6) BS02 rna ? GO:0000049 ... Q5SHQ0 28934499
    420943 5wit:1G (2.6) BS03 rna ? GO:0000049 ... Q5SHQ0 28934499
    420944 5wit:1G (2.6) BS04 MG ? GO:0000049 ... Q5SHQ0 28934499
    420945 5wit:1G (2.6) BS05 MG ? GO:0000049 ... Q5SHQ0 28934499
    420946 5wit:1H (2.6) BS01 rna ? GO:0002181 ... P0DOY8 28934499
    420947 5wit:1I (2.6) BS01 rna ? GO:0003735 ... Q5SLQ1 28934499
    420948 5wit:1N (2.6) BS01 rna ? GO:0003729 ... P60488 28934499
    420949 5wit:1N (2.6) BS02 MG ? GO:0003729 ... P60488 28934499
    420950 5wit:1N (2.6) BS03 MG ? GO:0003729 ... P60488 28934499
    420951 5wit:1O (2.6) BS01 rna ? GO:0003735 ... Q5SHP8 28934499
    420952 5wit:1O (2.6) BS02 rna ? GO:0003735 ... Q5SHP8 28934499
    420953 5wit:1O (2.6) BS03 MG ? GO:0003735 ... Q5SHP8 28934499
    420954 5wit:1O (2.6) BS04 MG ? GO:0003735 ... Q5SHP8 28934499
    420955 5wit:1O (2.6) BS05 MG ? GO:0003735 ... Q5SHP8 28934499
    420956 5wit:1P (2.6) BS01 rna ? GO:0003735 ... Q5SHQ7 28934499
    420957 5wit:1P (2.6) BS02 MG ? GO:0003735 ... Q5SHQ7 28934499
    420958 5wit:1P (2.6) BS03 MG ? GO:0003735 ... Q5SHQ7 28934499
    420959 5wit:1P (2.6) BS04 MG ? GO:0003735 ... Q5SHQ7 28934499
    420960 5wit:1P (2.6) BS05 MG ? GO:0003735 ... Q5SHQ7 28934499
    420961 5wit:1P (2.6) BS06 MG ? GO:0003735 ... Q5SHQ7 28934499
    420962 5wit:1P (2.6) BS07 MG ? GO:0003735 ... Q5SHQ7 28934499
    420963 5wit:1Q (2.6) BS01 rna ? GO:0000049 ... P60489 28934499
    420964 5wit:1Q (2.6) BS02 rna ? GO:0000049 ... P60489 28934499
    420965 5wit:1Q (2.6) BS03 rna ? GO:0000049 ... P60489 28934499
    420966 5wit:1Q (2.6) BS04 MG ? GO:0000049 ... P60489 28934499
    420967 5wit:1Q (2.6) BS05 MG ? GO:0000049 ... P60489 28934499
    420968 5wit:1Q (2.6) BS06 MG ? GO:0000049 ... P60489 28934499
    420969 5wit:1Q (2.6) BS07 MG ? GO:0000049 ... P60489 28934499
    420970 5wit:1R (2.6) BS01 rna ? GO:0003735 ... Q9Z9H5 28934499
    420971 5wit:1R (2.6) BS02 MG ? GO:0003735 ... Q9Z9H5 28934499
    420972 5wit:1R (2.6) BS03 MG ? GO:0003735 ... Q9Z9H5 28934499
    420973 5wit:1S (2.6) BS01 rna ? GO:0003735 ... Q5SHQ4 28934499
    420974 5wit:1S (2.6) BS02 rna ? GO:0003735 ... Q5SHQ4 28934499
    420975 5wit:1S (2.6) BS03 MG ? GO:0003735 ... Q5SHQ4 28934499
    420976 5wit:1S (2.6) BS04 MG ? GO:0003735 ... Q5SHQ4 28934499
    420977 5wit:1T (2.6) BS01 rna ? GO:0003735 ... P60490 28934499
    420978 5wit:1T (2.6) BS02 rna ? GO:0003735 ... P60490 28934499
    420979 5wit:1U (2.6) BS01 rna ? GO:0000027 ... P60491 28934499
    420980 5wit:1U (2.6) BS02 MG ? GO:0000027 ... P60491 28934499
    420981 5wit:1U (2.6) BS03 MG ? GO:0000027 ... P60491 28934499
    420982 5wit:1U (2.6) BS04 MG ? GO:0000027 ... P60491 28934499
    420983 5wit:1U (2.6) BS05 MG ? GO:0000027 ... P60491 28934499
    420984 5wit:1U (2.6) BS06 MG ? GO:0000027 ... P60491 28934499
    420985 5wit:1U (2.6) BS07 MG ? GO:0000027 ... P60491 28934499
    420986 5wit:1U (2.6) BS08 MG ? GO:0000027 ... P60491 28934499
    420987 5wit:1V (2.6) BS01 rna ? GO:0003723 ... P60492 28934499
    420988 5wit:1V (2.6) BS02 MG ? GO:0003723 ... P60492 28934499
    420989 5wit:1V (2.6) BS03 MG ? GO:0003723 ... P60492 28934499
    420990 5wit:1V (2.6) BS04 MG ? GO:0003723 ... P60492 28934499
    420991 5wit:1V (2.6) BS05 MG ? GO:0003723 ... P60492 28934499
    420992 5wit:1V (2.6) BS06 MG ? GO:0003723 ... P60492 28934499
    420993 5wit:1W (2.6) BS01 rna ? GO:0003735 ... Q5SHP3 28934499
    420994 5wit:1W (2.6) BS02 MG ? GO:0003735 ... Q5SHP3 28934499
    420995 5wit:1W (2.6) BS03 MG ? GO:0003735 ... Q5SHP3 28934499
    420996 5wit:1W (2.6) BS04 MG ? GO:0003735 ... Q5SHP3 28934499
    420997 5wit:1W (2.6) BS05 MG ? GO:0003735 ... Q5SHP3 28934499
    420998 5wit:1W (2.6) BS06 MG ? GO:0003735 ... Q5SHP3 28934499
    420999 5wit:1W (2.6) BS07 MG ? GO:0003735 ... Q5SHP3 28934499
    421000 5wit:1X (2.6) BS01 rna ? GO:0003735 ... Q5SHP0 28934499

    Reference:
  • Chengxin Zhang, Xi Zhang, Lydia Freddolino, and Yang Zhang. BioLiP2: an updated structure database for biologically relevent ligand-protein interactions, Nucleic Acids Research, gkad630 (2023).
  • Jianyi Yang, Ambrish Roy, and Yang Zhang. BioLiP: a semi-manually curated database for biologically relevant ligand-protein interactions, Nucleic Acids Research, 41: D1096-D1103 (2013) (download the PDF file).