SEQ2FUN

BioLiP
Download all results in tab-seperated text for 942758 receptor-ligand interactions, whose format is explained at readme.txt.
  • Hover over PDB to view the title of the structure. Click PDB to view the structure at the RCSB PDB database. Resolution -1.00 means the resolution is unavailable, e.g., for NMR structures.
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  • Hover over Ligand to view the full ligand name. Click Ligand to view the 2D diagram and other detail information of the ligand.
  • Hover over EC number to view the full name of enzymatic activity.
  • Hover over GO terms to view all GO terms.
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    # PDB
    (Resolution Å)
    Site # Ligand EC number GO terms UniProt PubMed Binding
    affinity
    421001 5wit:1X (2.6) BS02 MG ? GO:0003735 ... Q5SHP0 28934499
    421002 5wit:1X (2.6) BS03 MG ? GO:0003735 ... Q5SHP0 28934499
    421003 5wit:1X (2.6) BS04 MG ? GO:0003735 ... Q5SHP0 28934499
    421004 5wit:1X (2.6) BS05 MG ? GO:0003735 ... Q5SHP0 28934499
    421005 5wit:1X (2.6) BS06 MG ? GO:0003735 ... Q5SHP0 28934499
    421006 5wit:1Y (2.6) BS01 rna ? GO:0003723 ... Q5SHP9 28934499
    421007 5wit:1Y (2.6) BS02 ZN ? GO:0003723 ... Q5SHP9 28934499
    421008 5wit:1Y (2.6) BS03 MG ? GO:0003723 ... Q5SHP9 28934499
    421009 5wit:1Z (2.6) BS01 rna ? GO:0003723 ... Q5SHZ1 28934499
    421010 5wit:1b (2.6) BS01 rna ? GO:0003735 ... P80371 28934499
    421011 5wit:1b (2.6) BS02 MG ? GO:0003735 ... P80371 28934499
    421012 5wit:1c (2.6) BS01 rna ? GO:0003676 ... P80372 28934499
    421013 5wit:1d (2.6) BS01 rna ? GO:0003723 ... P80373 28934499
    421014 5wit:1d (2.6) BS02 SF4 ? GO:0003723 ... P80373 28934499
    421015 5wit:1e (2.6) BS01 rna ? GO:0003723 ... Q5SHQ5 28934499
    421016 5wit:1e (2.6) BS02 MG ? GO:0003723 ... Q5SHQ5 28934499
    421017 5wit:1e (2.6) BS03 MG ? GO:0003723 ... Q5SHQ5 28934499
    421018 5wit:1f (2.6) BS01 rna ? GO:0003735 ... Q5SLP8 28934499
    421019 5wit:1f (2.6) BS02 MG ? GO:0003735 ... Q5SLP8 28934499
    421020 5wit:1g (2.6) BS01 rna ? GO:0000049 ... P17291 28934499
    421021 5wit:1g (2.6) BS02 rna ? GO:0000049 ... P17291 28934499
    421022 5wit:1h (2.6) BS01 rna ? GO:0003735 ... P0DOY9 28934499
    421023 5wit:1i (2.6) BS01 rna ? GO:0000049 ... P80374 28934499
    421024 5wit:1i (2.6) BS02 rna ? GO:0000049 ... P80374 28934499
    421025 5wit:1j (2.6) BS01 rna ? GO:0000049 ... Q5SHN7 28934499
    421026 5wit:1k (2.6) BS01 rna ? GO:0003735 ... P80376 28934499
    421027 5wit:1k (2.6) BS02 MG ? GO:0003735 ... P80376 28934499
    421028 5wit:1l (2.6) BS01 rna ? GO:0000049 ... Q5SHN3 28934499
    421029 5wit:1l (2.6) BS02 rna ? GO:0000049 ... Q5SHN3 28934499
    421030 5wit:1l (2.6) BS03 MG ? GO:0000049 ... Q5SHN3 28934499
    421031 5wit:1m (2.6) BS01 rna ? GO:0000049 ... P80377 28934499
    421032 5wit:1m (2.6) BS02 rna ? GO:0000049 ... P80377 28934499
    421033 5wit:1m (2.6) BS03 rna ? GO:0000049 ... P80377 28934499
    421034 5wit:1m (2.6) BS04 MG ? GO:0000049 ... P80377 28934499
    421035 5wit:1m (2.6) BS05 MG ? GO:0000049 ... P80377 28934499
    421036 5wit:1n (2.6) BS01 rna ? GO:0003735 ... P0DOY6 28934499
    421037 5wit:1n (2.6) BS02 ZN ? GO:0003735 ... P0DOY6 28934499
    421038 5wit:1o (2.6) BS01 rna ? GO:0003735 ... Q5SJ76 28934499
    421039 5wit:1o (2.6) BS02 rna ? GO:0003735 ... Q5SJ76 28934499
    421040 5wit:1p (2.6) BS01 rna ? GO:0003735 ... Q5SJH3 28934499
    421041 5wit:1q (2.6) BS01 rna ? GO:0003735 ... P0DOY7 28934499
    421042 5wit:1r (2.6) BS01 rna ? GO:0003735 ... Q5SLQ0 28934499
    421043 5wit:1s (2.6) BS01 rna ? GO:0000028 ... Q5SHP2 28934499
    421044 5wit:1t (2.6) BS01 rna ? GO:0003723 ... P80380 28934499
    421045 5wit:1t (2.6) BS02 MG ? GO:0003723 ... P80380 28934499
    421046 5wit:20 (2.6) BS01 rna ? GO:0003735 ... P60493 28934499
    421047 5wit:20 (2.6) BS02 rna ? GO:0003735 ... P60493 28934499
    421048 5wit:20 (2.6) BS03 rna ? GO:0003735 ... P60493 28934499
    421049 5wit:21 (2.6) BS01 rna ? GO:0003735 ... P60494 28934499
    421050 5wit:21 (2.6) BS02 rna ? GO:0003735 ... P60494 28934499
    421051 5wit:21 (2.6) BS03 MG ? GO:0003735 ... P60494 28934499
    421052 5wit:22 (2.6) BS01 rna ? GO:0003735 ... Q5SHP6 28934499
    421053 5wit:23 (2.6) BS01 rna ? GO:0003735 ... Q5SHQ6 28934499
    421054 5wit:23 (2.6) BS02 rna ? GO:0003735 ... Q5SHQ6 28934499
    421055 5wit:23 (2.6) BS03 MG ? GO:0003735 ... Q5SHQ6 28934499
    421056 5wit:24 (2.6) BS01 rna ? GO:0003735 ... Q5SJE1 28934499
    421057 5wit:24 (2.6) BS02 ZN ? GO:0003735 ... Q5SJE1 28934499
    421058 5wit:25 (2.6) BS01 rna ? GO:0003735 ... P80339 28934499
    421059 5wit:25 (2.6) BS02 ZN ? GO:0003735 ... P80339 28934499
    421060 5wit:26 (2.6) BS01 rna ? GO:0000049 ... P35871 28934499
    421061 5wit:26 (2.6) BS02 ZN ? GO:0000049 ... P35871 28934499
    421062 5wit:27 (2.6) BS01 rna ? GO:0003735 ... P80340 28934499
    421063 5wit:28 (2.6) BS01 rna ? GO:0003735 ... Q5SKU1 28934499
    421064 5wit:29 (2.6) BS01 rna ? GO:0003735 ... Q5SHR2 28934499
    421065 5wit:29 (2.6) BS02 ZN ? GO:0003735 ... Q5SHR2 28934499
    421066 5wit:2D (2.6) BS01 rna ? GO:0002181 ... P60405 28934499
    421067 5wit:2D (2.6) BS02 rna ? GO:0002181 ... P60405 28934499
    421068 5wit:2D (2.6) BS03 MG ? GO:0002181 ... P60405 28934499
    421069 5wit:2D (2.6) BS04 MG ? GO:0002181 ... P60405 28934499
    421070 5wit:2D (2.6) BS05 MG ? GO:0002181 ... P60405 28934499
    421071 5wit:2D (2.6) BS06 MG ? GO:0002181 ... P60405 28934499
    421072 5wit:2E (2.6) BS01 rna ? GO:0003735 ... Q5SHN8 28934499
    421073 5wit:2E (2.6) BS02 MG ? GO:0003735 ... Q5SHN8 28934499
    421074 5wit:2F (2.6) BS01 rna ? GO:0003735 ... Q5SHN9 28934499
    421075 5wit:2F (2.6) BS02 MG ? GO:0003735 ... Q5SHN9 28934499
    421076 5wit:2F (2.6) BS03 MG ? GO:0003735 ... Q5SHN9 28934499
    421077 5wit:2F (2.6) BS04 MG ? GO:0003735 ... Q5SHN9 28934499
    421078 5wit:2F (2.6) BS05 MG ? GO:0003735 ... Q5SHN9 28934499
    421079 5wit:2G (2.6) BS01 rna ? GO:0000049 ... Q5SHQ0 28934499
    421080 5wit:2G (2.6) BS02 rna ? GO:0000049 ... Q5SHQ0 28934499
    421081 5wit:2G (2.6) BS03 rna ? GO:0000049 ... Q5SHQ0 28934499
    421082 5wit:2G (2.6) BS04 MG ? GO:0000049 ... Q5SHQ0 28934499
    421083 5wit:2H (2.6) BS01 rna ? GO:0002181 ... P0DOY8 28934499
    421084 5wit:2I (2.6) BS01 rna ? GO:0003735 ... Q5SLQ1 28934499
    421085 5wit:2N (2.6) BS01 rna ? GO:0003729 ... P60488 28934499
    421086 5wit:2O (2.6) BS01 rna ? GO:0003735 ... Q5SHP8 28934499
    421087 5wit:2O (2.6) BS02 rna ? GO:0003735 ... Q5SHP8 28934499
    421088 5wit:2P (2.6) BS01 rna ? GO:0003735 ... Q5SHQ7 28934499
    421089 5wit:2P (2.6) BS02 MG ? GO:0003735 ... Q5SHQ7 28934499
    421090 5wit:2Q (2.6) BS01 rna ? GO:0000049 ... P60489 28934499
    421091 5wit:2Q (2.6) BS02 rna ? GO:0000049 ... P60489 28934499
    421092 5wit:2Q (2.6) BS03 rna ? GO:0000049 ... P60489 28934499
    421093 5wit:2Q (2.6) BS04 MG ? GO:0000049 ... P60489 28934499
    421094 5wit:2Q (2.6) BS05 MG ? GO:0000049 ... P60489 28934499
    421095 5wit:2Q (2.6) BS06 MG ? GO:0000049 ... P60489 28934499
    421096 5wit:2R (2.6) BS01 rna ? GO:0003735 ... Q9Z9H5 28934499
    421097 5wit:2R (2.6) BS02 MG ? GO:0003735 ... Q9Z9H5 28934499
    421098 5wit:2S (2.6) BS01 rna ? GO:0003735 ... Q5SHQ4 28934499
    421099 5wit:2S (2.6) BS02 rna ? GO:0003735 ... Q5SHQ4 28934499
    421100 5wit:2T (2.6) BS01 rna ? GO:0003735 ... P60490 28934499
    421101 5wit:2T (2.6) BS02 rna ? GO:0003735 ... P60490 28934499
    421102 5wit:2U (2.6) BS01 rna ? GO:0000027 ... P60491 28934499
    421103 5wit:2U (2.6) BS02 MG ? GO:0000027 ... P60491 28934499
    421104 5wit:2U (2.6) BS03 MG ? GO:0000027 ... P60491 28934499
    421105 5wit:2V (2.6) BS01 rna ? GO:0003723 ... P60492 28934499
    421106 5wit:2V (2.6) BS02 MG ? GO:0003723 ... P60492 28934499
    421107 5wit:2V (2.6) BS03 MG ? GO:0003723 ... P60492 28934499
    421108 5wit:2V (2.6) BS04 MG ? GO:0003723 ... P60492 28934499
    421109 5wit:2W (2.6) BS01 rna ? GO:0003735 ... Q5SHP3 28934499
    421110 5wit:2W (2.6) BS02 MG ? GO:0003735 ... Q5SHP3 28934499
    421111 5wit:2X (2.6) BS01 rna ? GO:0003735 ... Q5SHP0 28934499
    421112 5wit:2X (2.6) BS02 MG ? GO:0003735 ... Q5SHP0 28934499
    421113 5wit:2Y (2.6) BS01 rna ? GO:0003723 ... Q5SHP9 28934499
    421114 5wit:2Y (2.6) BS02 ZN ? GO:0003723 ... Q5SHP9 28934499
    421115 5wit:2Z (2.6) BS01 rna ? GO:0003723 ... Q5SHZ1 28934499
    421116 5wit:2b (2.6) BS01 rna ? GO:0003735 ... P80371 28934499
    421117 5wit:2c (2.6) BS01 rna ? GO:0003676 ... P80372 28934499
    421118 5wit:2d (2.6) BS01 rna ? GO:0003723 ... P80373 28934499
    421119 5wit:2d (2.6) BS02 SF4 ? GO:0003723 ... P80373 28934499
    421120 5wit:2e (2.6) BS01 rna ? GO:0003723 ... Q5SHQ5 28934499
    421121 5wit:2e (2.6) BS02 MG ? GO:0003723 ... Q5SHQ5 28934499
    421122 5wit:2f (2.6) BS01 rna ? GO:0003735 ... Q5SLP8 28934499
    421123 5wit:2f (2.6) BS02 MG ? GO:0003735 ... Q5SLP8 28934499
    421124 5wit:2g (2.6) BS01 rna ? GO:0000049 ... P17291 28934499
    421125 5wit:2g (2.6) BS02 rna ? GO:0000049 ... P17291 28934499
    421126 5wit:2h (2.6) BS01 rna ? GO:0003735 ... P0DOY9 28934499
    421127 5wit:2i (2.6) BS01 rna ? GO:0000049 ... P80374 28934499
    421128 5wit:2i (2.6) BS02 rna ? GO:0000049 ... P80374 28934499
    421129 5wit:2j (2.6) BS01 rna ? GO:0000049 ... Q5SHN7 28934499
    421130 5wit:2k (2.6) BS01 rna ? GO:0003735 ... P80376 28934499
    421131 5wit:2k (2.6) BS02 MG ? GO:0003735 ... P80376 28934499
    421132 5wit:2l (2.6) BS01 rna ? GO:0000049 ... Q5SHN3 28934499
    421133 5wit:2l (2.6) BS02 rna ? GO:0000049 ... Q5SHN3 28934499
    421134 5wit:2m (2.6) BS01 rna ? GO:0000049 ... P80377 28934499
    421135 5wit:2m (2.6) BS02 rna ? GO:0000049 ... P80377 28934499
    421136 5wit:2m (2.6) BS03 rna ? GO:0000049 ... P80377 28934499
    421137 5wit:2n (2.6) BS01 rna ? GO:0003735 ... P0DOY6 28934499
    421138 5wit:2n (2.6) BS02 ZN ? GO:0003735 ... P0DOY6 28934499
    421139 5wit:2o (2.6) BS01 rna ? GO:0003735 ... Q5SJ76 28934499
    421140 5wit:2o (2.6) BS02 rna ? GO:0003735 ... Q5SJ76 28934499
    421141 5wit:2p (2.6) BS01 rna ? GO:0003735 ... Q5SJH3 28934499
    421142 5wit:2q (2.6) BS01 rna ? GO:0003735 ... P0DOY7 28934499
    421143 5wit:2q (2.6) BS02 MG ? GO:0003735 ... P0DOY7 28934499
    421144 5wit:2q (2.6) BS03 MG ? GO:0003735 ... P0DOY7 28934499
    421145 5wit:2r (2.6) BS01 rna ? GO:0003735 ... Q5SLQ0 28934499
    421146 5wit:2s (2.6) BS01 rna ? GO:0000028 ... Q5SHP2 28934499
    421147 5wit:2t (2.6) BS01 rna ? GO:0003723 ... P80380 28934499
    421148 5wit:2t (2.6) BS02 MG ? GO:0003723 ... P80380 28934499
    421149 5wiu:A (1.962) BS01 AQD ? GO:0004930 ... P0ABE7
    P21917
    29051383
    421150 5wiv:A (2.143) BS01 AQD ? GO:0004930 ... P0ABE7
    P21917
    29051383
    421151 5wiy:A (2.23) BS01 1XM ? N/A Q14145 31851823
    421152 5wiz:A (1.96) BS01 ZN ? GO:0008270 ... A0A060GYS1 N/A
    421153 5wiz:A (1.96) BS02 ZN ? GO:0008270 ... A0A060GYS1 N/A
    421154 5wiz:G (1.96) BS01 ZN ? GO:0008270 ... A0A060GYS1 N/A
    421155 5wiz:G (1.96) BS02 ZN ? GO:0008270 ... A0A060GYS1 N/A
    421156 5wj0:A (1.65) BS01 ZN ? GO:0008270 ... A0A060GZX0 N/A
    421157 5wj0:A (1.65) BS02 ZN ? GO:0008270 ... A0A060GZX0 N/A
    421158 5wj0:G (1.65) BS01 ZN ? GO:0008270 ... A0A060GZX0 N/A
    421159 5wj0:G (1.65) BS02 ZN ? GO:0008270 ... A0A060GZX0 N/A
    421160 5wj1:A (2.522) BS01 MG 2.2.1.6 GO:0000287 ... P17597 29440497
    421161 5wj1:A (2.522) BS02 FAD 2.2.1.6 GO:0000287 ... P17597 29440497
    421162 5wj1:A (2.522) BS03 PXD 2.2.1.6 GO:0000287 ... P17597 29440497
    421163 5wj1:A (2.522) BS04 TP9 2.2.1.6 GO:0000287 ... P17597 29440497
    421164 5wj6:A (2.445) BS01 B4A 3.5.1.2 GO:0004359 ... O94925 29317493 MOAD: Kd=27nM
    BindingDB: IC50=29nM
    421165 5wj6:C (2.445) BS01 B4A 3.5.1.2 GO:0004359 ... O94925 29317493 MOAD: Kd=27nM
    BindingDB: IC50=29nM
    421166 5wj8:A (1.86) BS01 CA ? GO:0005509 ... Q9H251 30033219
    421167 5wj8:A (1.86) BS02 CA ? GO:0005509 ... Q9H251 30033219
    421168 5wj8:A (1.86) BS03 CA ? GO:0005509 ... Q9H251 30033219
    421169 5wj8:A (1.86) BS04 CA ? GO:0005509 ... Q9H251 30033219
    421170 5wj9:A (3.49) BS01 AQV ? GO:0001891 ... Q9GZU1 29019983
    421171 5wj9:B (3.49) BS01 AQV ? GO:0001891 ... Q9GZU1 29019983
    421172 5wj9:C (3.49) BS01 AQV ? GO:0001891 ... Q9GZU1 29019983
    421173 5wj9:D (3.49) BS01 AQV ? GO:0001891 ... Q9GZU1 29019983
    421174 5wja:A (2.3) BS01 CU 1.14.17.3
    4.3.2.5
    GO:0003824 ... P14925 30271955
    421175 5wja:A (2.3) BS02 CU 1.14.17.3
    4.3.2.5
    GO:0003824 ... P14925 30271955
    421176 5wja:D (2.3) BS01 CU 1.14.17.3
    4.3.2.5
    GO:0003824 ... P14925 30271955
    421177 5wja:D (2.3) BS02 FLC 1.14.17.3
    4.3.2.5
    GO:0003824 ... P14925 30271955
    421178 5wjc:A (2.298) BS01 peptide ? GO:0000510 ... O94244 29804820
    421179 5wjd:A (2.001) BS01 ACO 2.3.1.- GO:0008080 ... Q59DX8 29581307
    421180 5wje:A (1.765) BS01 peptide 2.3.1.- GO:0008080 ... Q59DX8 29581307
    421181 5wje:A (1.765) BS02 CMC 2.3.1.- GO:0008080 ... Q59DX8 29581307
    421182 5wjg:A (1.5) BS01 CA 3.4.21.64 GO:0004252 ... P06873 30289409
    421183 5wjh:A (1.63) BS01 CA 3.4.21.64 GO:0004252 ... P06873 30289409
    421184 5wjh:A (1.63) BS02 MHA 3.4.21.64 GO:0004252 ... P06873 30289409
    421185 5wjj:A (1.6) BS01 AQY 2.7.11.24 GO:0000077 ... Q16539 29291937 MOAD: ic50=5.4nM
    BindingDB: IC50=5.4nM
    421186 5wjk:A (2.0) BS01 HEM 1.11.1.-
    1.7.-.-
    GO:0004601 ... P02185 29300389
    421187 5wjl:A (3.15) BS01 peptide ? N/A P04439 28945243
    421188 5wjl:D (3.15) BS01 peptide ? N/A P04439 28945243
    421189 5wjl:G (3.15) BS01 peptide ? N/A P04439 28945243
    421190 5wjm:A (2.9) BS01 CA ? GO:0005509 ... Q99PF4 30033219
    421191 5wjm:A (2.9) BS02 CA ? GO:0005509 ... Q99PF4 30033219
    421192 5wjm:A (2.9) BS03 CA ? GO:0005509 ... Q99PF4 30033219
    421193 5wjm:A (2.9) BS04 CA ? GO:0005509 ... Q99PF4 30033219
    421194 5wjm:A (2.9) BS05 CA ? GO:0005509 ... Q99PF4 30033219
    421195 5wjm:A (2.9) BS06 CA ? GO:0005509 ... Q99PF4 30033219
    421196 5wjn:A (2.85) BS01 peptide ? N/A P04439 28945243
    421197 5wjn:D (2.85) BS01 peptide ? N/A P04439 28945243
    421198 5wjn:G (2.85) BS01 peptide ? N/A P04439 28945243
    421199 5wjq:D (2.794) BS01 dna ? N/A E9PYI1 29551271
    421200 5wjq:D (2.794) BS02 dna ? N/A E9PYI1 29551271

    Reference:
  • Chengxin Zhang, Xi Zhang, Lydia Freddolino, and Yang Zhang. BioLiP2: an updated structure database for biologically relevent ligand-protein interactions, Nucleic Acids Research, gkad630 (2023).
  • Jianyi Yang, Ambrish Roy, and Yang Zhang. BioLiP: a semi-manually curated database for biologically relevant ligand-protein interactions, Nucleic Acids Research, 41: D1096-D1103 (2013) (download the PDF file).