SEQ2FUN

BioLiP
Download all results in tab-seperated text for 942758 receptor-ligand interactions, whose format is explained at readme.txt.
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    # PDB
    (Resolution Å)
    Site # Ligand EC number GO terms UniProt PubMed Binding
    affinity
    421201 5wjq:D (2.794) BS03 ZN ? N/A E9PYI1 29551271
    421202 5wjq:D (2.794) BS04 ZN ? N/A E9PYI1 29551271
    421203 5wjq:D (2.794) BS05 ZN ? N/A E9PYI1 29551271
    421204 5wjq:D (2.794) BS06 ZN ? N/A E9PYI1 29551271
    421205 5wjq:D (2.794) BS07 ZN ? N/A E9PYI1 29551271
    421206 5wjq:D (2.794) BS08 ZN ? N/A E9PYI1 29551271
    421207 5wjq:D (2.794) BS09 ZN ? N/A E9PYI1 29551271
    421208 5wjq:D (2.794) BS10 ZN ? N/A E9PYI1 29551271
    421209 5wjq:D (2.794) BS11 ZN ? N/A E9PYI1 29551271
    421210 5wjq:D (2.794) BS12 ZN ? N/A E9PYI1 29551271
    421211 5wjr:A (1.7) BS01 rna 3.1.26.4 GO:0003676 ... Q9KEI9 N/A
    421212 5wjr:A (1.7) BS02 dna 3.1.26.4 GO:0003676 ... Q9KEI9 N/A
    421213 5wjr:A (1.7) BS03 MG 3.1.26.4 GO:0003676 ... Q9KEI9 N/A
    421214 5wjr:A (1.7) BS04 MG 3.1.26.4 GO:0003676 ... Q9KEI9 N/A
    421215 5wjs:A (2.15) BS01 NAI ? GO:0000166 ... Q2SZC0 N/A
    421216 5wjs:B (2.15) BS01 NAI ? GO:0000166 ... Q2SZC0 N/A
    421217 5wk0:A (1.335) BS01 NI ? GO:0016740 ... A0A2C9TMM3 29417696
    421218 5wk7:A (1.983) BS01 HEM 1.14.15.1 GO:0004497 ... P00183 28823160
    421219 5wk7:A (1.983) BS02 CAH 1.14.15.1 GO:0004497 ... P00183 28823160
    421220 5wk9:A (1.983) BS01 HEM 1.14.15.1 GO:0004497 ... P00183 28823160
    421221 5wk9:A (1.983) BS02 CAM 1.14.15.1 GO:0004497 ... P00183 28823160 MOAD: Kd=32.2uM
    421222 5wkc:A (2.334) BS01 MG 2.2.1.6 GO:0000287 ... P07342 29440497
    421223 5wkc:A (2.334) BS02 PXD 2.2.1.6 GO:0000287 ... P07342 29440497 MOAD: Ki=2.2nM
    421224 5wkc:A (2.334) BS03 FAD 2.2.1.6 GO:0000287 ... P07342 29440497
    421225 5wkc:A (2.334) BS04 F50 2.2.1.6 GO:0000287 ... P07342 29440497
    421226 5wkc:A (2.334) BS05 AUJ 2.2.1.6 GO:0000287 ... P07342 29440497
    421227 5wkc:A (2.334) BS06 PXD 2.2.1.6 GO:0000287 ... P07342 29440497 MOAD: Ki=2.2nM
    421228 5wkc:A (2.334) BS07 TP9 2.2.1.6 GO:0000287 ... P07342 29440497
    421229 5wkc:B (2.334) BS01 MG 2.2.1.6 GO:0000287 ... P07342 29440497
    421230 5wkc:B (2.334) BS02 PXD 2.2.1.6 GO:0000287 ... P07342 29440497 MOAD: Ki=2.2nM
    421231 5wkc:B (2.334) BS03 FAD 2.2.1.6 GO:0000287 ... P07342 29440497
    421232 5wkc:B (2.334) BS04 TP9 2.2.1.6 GO:0000287 ... P07342 29440497
    421233 5wkc:B (2.334) BS05 F50 2.2.1.6 GO:0000287 ... P07342 29440497
    421234 5wkc:B (2.334) BS06 PXD 2.2.1.6 GO:0000287 ... P07342 29440497 MOAD: Ki=2.2nM
    421235 5wkc:B (2.334) BS07 TP9 2.2.1.6 GO:0000287 ... P07342 29440497
    421236 5wkc:D (2.334) BS01 PXD 2.2.1.6 GO:0000287 ... P07342 29440497 MOAD: Ki=2.2nM
    421237 5wkc:D (2.334) BS02 AUJ 2.2.1.6 GO:0000287 ... P07342 29440497
    421238 5wkc:D (2.334) BS03 MG 2.2.1.6 GO:0000287 ... P07342 29440497
    421239 5wkc:D (2.334) BS04 PXD 2.2.1.6 GO:0000287 ... P07342 29440497 MOAD: Ki=2.2nM
    421240 5wkc:D (2.334) BS05 FAD 2.2.1.6 GO:0000287 ... P07342 29440497
    421241 5wkc:D (2.334) BS06 TP9 2.2.1.6 GO:0000287 ... P07342 29440497
    421242 5wkc:E (2.334) BS01 PXD 2.2.1.6 GO:0000287 ... P07342 29440497 MOAD: Ki=2.2nM
    421243 5wkc:E (2.334) BS02 TP9 2.2.1.6 GO:0000287 ... P07342 29440497
    421244 5wkc:E (2.334) BS03 MG 2.2.1.6 GO:0000287 ... P07342 29440497
    421245 5wkc:E (2.334) BS04 PXD 2.2.1.6 GO:0000287 ... P07342 29440497 MOAD: Ki=2.2nM
    421246 5wkc:E (2.334) BS05 FAD 2.2.1.6 GO:0000287 ... P07342 29440497
    421247 5wkc:E (2.334) BS06 TP9 2.2.1.6 GO:0000287 ... P07342 29440497
    421248 5wkc:E (2.334) BS07 F50 2.2.1.6 GO:0000287 ... P07342 29440497
    421249 5wke:A (1.69) BS01 CUY ? N/A P29016 29054999
    421250 5wke:A (1.69) BS02 P50 ? N/A P29016 29054999
    421251 5wkf:A (2.95) BS01 peptide ? N/A P04439 28945243
    421252 5wkf:E (2.95) BS01 peptide N/A N/A N/A 28945243
    421253 5wkf:F (2.95) BS01 peptide ? N/A P04439 28945243
    421254 5wkf:I (2.95) BS01 peptide ? GO:0002250 ... A0A087WSZ9
    K7N5N2
    28945243
    421255 5wkf:J (2.95) BS01 peptide N/A N/A N/A 28945243
    421256 5wkg:A (2.06) BS01 D21 ? N/A P29016 29054999
    421257 5wkg:A (2.06) BS02 CUY ? N/A P29016 29054999
    421258 5wkh:A (3.2) BS01 peptide ? N/A P04439 28945243
    421259 5wkh:D (3.2) BS01 peptide ? GO:0002250 ... A0A087WSZ9
    K7N5N2
    28945243
    421260 5wkh:E (3.2) BS01 peptide N/A N/A N/A 28945243
    421261 5wkh:F (3.2) BS01 peptide ? N/A P04439 28945243
    421262 5wkh:J (3.2) BS01 peptide N/A N/A N/A 28945243
    421263 5wki:A (2.75) BS01 CUY ? N/A P29016 29054999
    421264 5wki:A (2.75) BS02 D3D ? N/A P29016 29054999
    421265 5wki:D (2.75) BS01 D3D ? N/A A0A087WT03
    Q6P4G7
    29054999
    421266 5wki:E (2.75) BS01 D3D N/A N/A N/A 29054999
    421267 5wkj:A (2.05) BS01 B1S 2.7.7.50
    3.4.19.12
    3.4.22.-
    3.4.22.69
    GO:0008233 ... K9N638 29544147
    421268 5wkj:A (2.05) BS02 K36 2.7.7.50
    3.4.19.12
    3.4.22.-
    3.4.22.69
    GO:0008233 ... K9N638 29544147
    421269 5wkk:A (1.55) BS01 AW4 2.7.7.50
    3.4.19.12
    3.4.22.-
    3.4.22.69
    GO:0008233 ... K9N638 29544147
    421270 5wkk:A (1.55) BS02 B3G 2.7.7.50
    3.4.19.12
    3.4.22.-
    3.4.22.69
    GO:0008233 ... K9N638 29544147
    421271 5wkl:A (1.85) BS01 AVY 2.7.7.50
    3.4.19.12
    3.4.22.-
    3.4.22.69
    GO:0008233 ... K9N638 29544147
    421272 5wkl:A (1.85) BS02 B3J 2.7.7.50
    3.4.19.12
    3.4.22.-
    3.4.22.69
    GO:0008233 ... K9N638 29544147
    421273 5wkm:A (2.25) BS01 N02 2.7.7.50
    3.4.19.12
    3.4.22.-
    3.4.22.69
    GO:0008233 ... K9N638 29544147
    421274 5wkm:A (2.25) BS02 B6Y 2.7.7.50
    3.4.19.12
    3.4.22.-
    3.4.22.69
    GO:0008233 ... K9N638 29544147
    421275 5wkn:A (2.653) BS01 peptide ? GO:0005198 ... Q88435 29237836
    421276 5wkn:B (2.653) BS01 peptide ? GO:0005198 ... Q88435 29237836
    421277 5wkp:A (3.15) BS01 PLP 2.8.1.7 GO:0030170 ... Q9Y697 29097656
    421278 5wkp:B (3.15) BS01 8Q1 ? GO:0005515 ... Q9HD34 29097656
    421279 5wkp:E (3.15) BS01 PLP 2.8.1.7 GO:0030170 ... Q9Y697 29097656
    421280 5wkp:F (3.15) BS01 8Q1 ? GO:0005515 ... Q9HD34 29097656
    421281 5wkr:A (1.4) BS01 NAR N/A GO:0016872 ... N/A 29686356
    421282 5wks:A (1.5) BS01 NAR N/A GO:0016872 ... N/A 29686356
    421283 5wkt:A (3.2) BS01 peptide ? GO:0000139 ... P02699 29300389
    421284 5wl0:A (2.4) BS01 21G ? GO:0003723 ... Q67296 28839261 MOAD: Kd=0.67nM
    421285 5wl1:A (1.38) BS01 CUY ? N/A P29016 29054999
    421286 5wl1:A (1.38) BS02 D3D ? N/A P29016 29054999
    421287 5wlb:A (1.72) BS01 GNP 3.6.5.2 GO:0003924 ... P01116 29282294
    421288 5wlb:D (1.72) BS01 GNP 3.6.5.2 GO:0003924 ... P01116 29282294
    421289 5wlc:L4 (3.8) BS01 rna ? GO:0002181 ... P0CX35 28945246
    421290 5wlc:L5 (3.8) BS01 rna ? GO:0003723 ... A0A1L4AA68 28945246
    421291 5wlc:L6 (3.8) BS01 rna ? GO:0000462 ... P0CX37 28945246
    421292 5wlc:L8 (3.8) BS01 rna ? GO:0000462 ... P0CX39 28945246
    421293 5wlc:L9 (3.8) BS01 rna ? GO:0000462 ... O13516 28945246
    421294 5wlc:LC (3.8) BS01 rna ? GO:0000462 ... P0CX51 28945246
    421295 5wlc:LC (3.8) BS02 rna ? GO:0000462 ... P0CX51 28945246
    421296 5wlc:LD (3.8) BS01 rna ? GO:0000028 ... P0CX47 28945246
    421297 5wlc:LF (3.8) BS01 rna ? GO:0000462 ... P0CX31 28945246
    421298 5wlc:LG (3.8) BS01 rna ? GO:0000028 ... Q3E7X9 28945246
    421299 5wlc:LH (3.8) BS01 rna ? GO:0000462 ... Q02931 28945246
    421300 5wlc:LH (3.8) BS02 rna ? GO:0000462 ... Q02931 28945246
    421301 5wlc:LJ (3.8) BS01 rna ? GO:0000462 ... Q04305 28945246
    421302 5wlc:LJ (3.8) BS02 rna ? GO:0000462 ... Q04305 28945246
    421303 5wlc:LL (3.8) BS01 rna ? GO:0000462 ... Q04177 28945246
    421304 5wlc:LM (3.8) BS01 rna ? GO:0000447 ... P42945 28945246
    421305 5wlc:LN (3.8) BS01 rna ? GO:0000462 ... Q06679 28945246
    421306 5wlc:LO (3.8) BS01 rna ? GO:0000028 ... P25635 28945246
    421307 5wlc:LO (3.8) BS02 rna ? GO:0000028 ... P25635 28945246
    421308 5wlc:LO (3.8) BS03 rna ? GO:0000028 ... P25635 28945246
    421309 5wlc:LP (3.8) BS01 rna ? GO:0000462 ... Q02354 28945246
    421310 5wlc:LQ (3.8) BS01 rna ? GO:0000447 ... Q12220 28945246
    421311 5wlc:LR (3.8) BS01 rna ? GO:0006364 ... Q05946 28945246
    421312 5wlc:LS (3.8) BS01 rna ? GO:0000292 ... P40362 28945246
    421313 5wlc:LT (3.8) BS01 rna ? GO:0003674 ... Q06078 28945246
    421314 5wlc:LT (3.8) BS02 rna ? GO:0003674 ... Q06078 28945246
    421315 5wlc:LU (3.8) BS01 rna ? GO:0000462 ... P33750 28945246
    421316 5wlc:LU (3.8) BS02 rna ? GO:0000462 ... P33750 28945246
    421317 5wlc:LU (3.8) BS03 rna ? GO:0000462 ... P33750 28945246
    421318 5wlc:LV (3.8) BS01 rna ? GO:0000462 ... P48234 28945246
    421319 5wlc:LW (3.8) BS01 rna ? GO:0000447 ... P40055 28945246
    421320 5wlc:LW (3.8) BS02 rna ? GO:0000447 ... P40055 28945246
    421321 5wlc:LW (3.8) BS03 rna ? GO:0000447 ... P40055 28945246
    421322 5wlc:LX (3.8) BS01 rna 2.3.1.- GO:0008080 ... P53914 28945246
    421323 5wlc:LZ (3.8) BS01 rna ? GO:0003723 ... P32899 28945246
    421324 5wlc:LZ (3.8) BS02 rna ? GO:0003723 ... P32899 28945246
    421325 5wlc:NA (3.8) BS01 rna ? GO:0000447 ... P47083 28945246
    421326 5wlc:NB (3.8) BS01 rna ? GO:0000447 ... Q12136 28945246
    421327 5wlc:NC (3.8) BS01 rna ? GO:0000447 ... P40079 28945246
    421328 5wlc:ND (3.8) BS01 rna ? GO:0000447 ... Q08492 28945246
    421329 5wlc:NE (3.8) BS01 rna ? GO:0000462 ... P40546 28945246
    421330 5wlc:NE (3.8) BS02 rna ? GO:0000462 ... P40546 28945246
    421331 5wlc:NE (3.8) BS03 rna ? GO:0000462 ... P40546 28945246
    421332 5wlc:NF (3.8) BS01 rna ? GO:0000462 ... P05756 28945246
    421333 5wlc:NG (3.8) BS01 rna ? GO:0000028 ... P06367 28945246
    421334 5wlc:NJ (3.8) BS01 rna ? GO:0000447 ... Q05022 28945246
    421335 5wlc:SA (3.8) BS01 rna ? GO:0000154 ... Q12460 28945246
    421336 5wlc:SA (3.8) BS02 rna ? GO:0000154 ... Q12460 28945246
    421337 5wlc:SB (3.8) BS01 rna ? GO:0030515 ... Q12499 28945246
    421338 5wlc:SB (3.8) BS02 rna ? GO:0030515 ... Q12499 28945246
    421339 5wlc:SD (3.8) BS01 rna 2.1.1.- GO:0000451 ... P15646 28945246
    421340 5wlc:SE (3.8) BS01 rna ? GO:0000245 ... P39990 28945246
    421341 5wlc:SF (3.8) BS01 rna ? GO:0000245 ... P39990 28945246
    421342 5wlc:SG (3.8) BS01 rna ? GO:0000447 ... Q06506 28945246
    421343 5wlc:SH (3.8) BS01 rna ? GO:0000447 ... Q08096 28945246
    421344 5wlc:SI (3.8) BS01 rna ? GO:0005524 ... Q08965 28945246
    421345 5wlc:SI (3.8) BS02 rna ? GO:0005524 ... Q08965 28945246
    421346 5wlc:SI (3.8) BS03 rna ? GO:0005524 ... Q08965 28945246
    421347 5wlc:SJ (3.8) BS01 rna 2.1.1.260 GO:0000447 ... Q06287 28945246
    421348 5wlc:SK (3.8) BS01 rna 2.1.1.260 GO:0000447 ... Q06287 28945246
    421349 5wlc:SL (3.8) BS01 rna ? GO:0000447 ... Q05498 28945246
    421350 5wlc:SL (3.8) BS02 rna ? GO:0000447 ... Q05498 28945246
    421351 5wlc:SL (3.8) BS03 ZN ? GO:0000447 ... Q05498 28945246
    421352 5wlc:SM (3.8) BS01 rna ? GO:0005515 ... P53941 28945246
    421353 5wlc:SM (3.8) BS02 rna ? GO:0005515 ... P53941 28945246
    421354 5wlc:SN (3.8) BS01 rna ? GO:0000462 ... P36144 28945246
    421355 5wlc:SN (3.8) BS02 rna ? GO:0000462 ... P36144 28945246
    421356 5wlc:SO (3.8) BS01 rna ? GO:0000056 ... Q99216 28945246
    421357 5wlc:SP (3.8) BS01 rna N/A N/A N/A 28945246
    421358 5wlc:SQ (3.8) BS01 rna ? GO:0000447 ... Q12035 28945246
    421359 5wlc:SQ (3.8) BS02 rna ? GO:0000447 ... Q12035 28945246
    421360 5wlc:SR (3.8) BS01 rna ? GO:0000462 ... P0CY39 28945246
    421361 5wlc:SS (3.8) BS01 rna ? GO:0000447 ... Q04500 28945246
    421362 5wlc:SS (3.8) BS02 rna ? GO:0000447 ... Q04500 28945246
    421363 5wlc:ST (3.8) BS01 rna ? GO:0000028 ... Q99207 28945246
    421364 5wlc:ST (3.8) BS02 rna ? GO:0000028 ... Q99207 28945246
    421365 5wlc:SU (3.8) BS01 rna ? GO:0042254 ... Q06512 28945246
    421366 5wlc:SV (3.8) BS01 rna ? GO:0005634 ... B5VKI1
    E9P9B2
    28945246
    421367 5wlc:SX (3.8) BS01 rna N/A N/A N/A 28945246
    421368 5wlc:SY (3.8) BS01 rna ? GO:0005634 ... B5VM59 28945246
    421369 5wlc:SY (3.8) BS02 rna ? GO:0005634 ... B5VM59 28945246
    421370 5wlc:SY (3.8) BS03 rna ? GO:0005634 ... B5VM59 28945246
    421371 5wlc:SZ (3.8) BS01 rna ? GO:0000447 ... P38333 28945246
    421372 5wle:A (1.952) BS01 peptide 3.6.-.- GO:0048188 ... Q9VG78 28919441
    421373 5wle:A (1.952) BS02 ZN 3.6.-.- GO:0048188 ... Q9VG78 28919441
    421374 5wle:A (1.952) BS03 ZN 3.6.-.- GO:0048188 ... Q9VG78 28919441
    421375 5wlf:A (1.4) BS01 ZN 3.6.-.- GO:0048188 ... Q9VG78 28919441
    421376 5wlf:A (1.4) BS02 ZN 3.6.-.- GO:0048188 ... Q9VG78 28919441
    421377 5wlg:A (2.1) BS01 peptide ? N/A P01899 29150238
    421378 5wlg:E (2.1) BS01 peptide ? N/A K7N5M4
    P04213
    29150238
    421379 5wlg:F (2.1) BS01 peptide ? N/A P01899 29150238
    421380 5wlg:J (2.1) BS01 peptide ? N/A K7N5M4
    P04213
    29150238
    421381 5wlh:A (1.80001) BS01 rna ? GO:0003723 ... A0A2D0TCH1 28892041
    421382 5wli:A (2.2) BS01 peptide ? N/A P01899 29150238
    421383 5wli:D (2.2) BS01 peptide ? N/A P01899 29150238
    421384 5wli:G (2.2) BS01 peptide ? N/A P01899 29150238
    421385 5wli:J (2.2) BS01 peptide ? N/A P01899 29150238
    421386 5wlo:A (1.27) BS01 GR7 3.1.13.2
    3.1.26.13
    GO:0004190 ... Q72498 28958624
    421387 5wlo:B (1.27) BS01 GR7 3.1.13.2
    3.1.26.13
    GO:0004190 ... Q72498 28958624 MOAD: Ki=0.015nM
    421388 5wlq:A (3.104) BS01 TMO ? GO:0008017 ... P12883
    P13848
    Q15691
    28743637
    421389 5wlr:A (1.49) BS01 ZN 4.2.1.1
    4.2.1.69
    GO:0002009 ... P00918 N/A
    421390 5wlr:A (1.49) BS02 86B 4.2.1.1
    4.2.1.69
    GO:0002009 ... P00918 N/A
    421391 5wlr:A (1.49) BS03 86B 4.2.1.1
    4.2.1.69
    GO:0002009 ... P00918 N/A
    421392 5wlt:A (1.57) BS01 ZN 4.2.1.1
    4.2.1.69
    GO:0002009 ... P00918 29851481
    421393 5wlt:A (1.57) BS02 86B 4.2.1.1
    4.2.1.69
    GO:0002009 ... P00918 29851481 MOAD: Ki=155.5nM
    421394 5wlt:A (1.57) BS03 86B 4.2.1.1
    4.2.1.69
    GO:0002009 ... P00918 29851481 MOAD: Ki=155.5nM
    421395 5wlt:A (1.57) BS04 86B 4.2.1.1
    4.2.1.69
    GO:0002009 ... P00918 29851481 MOAD: Ki=155.5nM
    421396 5wlt:A (1.57) BS05 86B 4.2.1.1
    4.2.1.69
    GO:0002009 ... P00918 29851481 MOAD: Ki=155.5nM
    421397 5wlu:A (1.39) BS01 ZN 4.2.1.1
    4.2.1.69
    GO:0002009 ... P00918 N/A
    421398 5wlu:A (1.39) BS02 42G 4.2.1.1
    4.2.1.69
    GO:0002009 ... P00918 N/A
    421399 5wlv:A (1.4) BS01 ZN 4.2.1.1
    4.2.1.69
    GO:0002009 ... P00918 29851481
    421400 5wlv:A (1.4) BS02 42G 4.2.1.1
    4.2.1.69
    GO:0002009 ... P00918 29851481 MOAD: Ki=3nM

    Reference:
  • Chengxin Zhang, Xi Zhang, Lydia Freddolino, and Yang Zhang. BioLiP2: an updated structure database for biologically relevent ligand-protein interactions, Nucleic Acids Research, gkad630 (2023).
  • Jianyi Yang, Ambrish Roy, and Yang Zhang. BioLiP: a semi-manually curated database for biologically relevant ligand-protein interactions, Nucleic Acids Research, 41: D1096-D1103 (2013) (download the PDF file).