SEQ2FUN

BioLiP
Download all results in tab-seperated text for 942758 receptor-ligand interactions, whose format is explained at readme.txt.
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    # PDB
    (Resolution Å)
    Site # Ligand EC number GO terms UniProt PubMed Binding
    affinity
    421401 5wlv:A (1.4) BS03 42G 4.2.1.1
    4.2.1.69
    GO:0002009 ... P00918 29851481 MOAD: Ki=3nM
    421402 5wlw:A (3.317) BS01 PLP 2.8.1.7 GO:0030170 ... Q9Y697 29097656
    421403 5wlw:B (3.317) BS01 8Q1 ? GO:0005515 ... Q9HD34 29097656
    421404 5wlw:D (3.317) BS01 ZN ? GO:0005506 ... Q9H1K1 29097656
    421405 5wlw:E (3.317) BS01 PLP 2.8.1.7 GO:0030170 ... Q9Y697 29097656
    421406 5wlw:F (3.317) BS01 8Q1 ? GO:0005515 ... Q9HD34 29097656
    421407 5wlw:H (3.317) BS01 ZN ? GO:0005506 ... Q9H1K1 29097656
    421408 5wly:A (2.0) BS01 MN 3.6.1.54 GO:0005737 ... P43341 29626094
    421409 5wly:A (2.0) BS02 MN 3.6.1.54 GO:0005737 ... P43341 29626094
    421410 5wm1:A (1.85) BS01 dna 2.7.7.- GO:0003684 ... P12689 29042535
    421411 5wm1:A (1.85) BS02 dna 2.7.7.- GO:0003684 ... P12689 29042535
    421412 5wm1:A (1.85) BS03 MG 2.7.7.- GO:0003684 ... P12689 29042535
    421413 5wm1:A (1.85) BS04 MG 2.7.7.- GO:0003684 ... P12689 29042535
    421414 5wm1:A (1.85) BS05 MG 2.7.7.- GO:0003684 ... P12689 29042535
    421415 5wm1:A (1.85) BS06 DCP 2.7.7.- GO:0003684 ... P12689 29042535
    421416 5wm2:A (1.548) BS01 AMP ? GO:0000166 ... A0A140DJY3 29742306
    421417 5wm3:A (1.679) BS01 B5V ? GO:0000166 ... A0A140DJY3 29742306
    421418 5wm3:A (1.679) BS02 MG ? GO:0000166 ... A0A140DJY3 29742306
    421419 5wm4:A (1.781) BS01 B5M ? GO:0000166 ... A0A140DJY3 29742306
    421420 5wm4:A (1.781) BS02 MG ? GO:0000166 ... A0A140DJY3 29742306
    421421 5wm5:A (1.797) BS01 B5Y ? GO:0000166 ... A0A140DJY3 29742306
    421422 5wm6:A (2.0) BS01 OOB ? GO:0000166 ... A0A140DJY3 29742306
    421423 5wm6:A (2.0) BS02 MG ? GO:0000166 ... A0A140DJY3 29742306
    421424 5wm7:A (1.777) BS01 AMP ? GO:0000166 ... A0A140DJY3 29742306
    421425 5wm8:A (1.92) BS01 dna 2.7.7.- GO:0003684 ... P12689 29042535
    421426 5wm8:A (1.92) BS02 dna 2.7.7.- GO:0003684 ... P12689 29042535
    421427 5wm8:A (1.92) BS03 MG 2.7.7.- GO:0003684 ... P12689 29042535
    421428 5wm8:A (1.92) BS04 MG 2.7.7.- GO:0003684 ... P12689 29042535
    421429 5wm8:A (1.92) BS05 MG 2.7.7.- GO:0003684 ... P12689 29042535
    421430 5wm8:A (1.92) BS06 DCP 2.7.7.- GO:0003684 ... P12689 29042535
    421431 5wma:A (1.401) BS01 6JC ? N/A O60885 29386193
    421432 5wmb:A (2.25) BS01 dna 2.7.7.- GO:0003684 ... P12689 29042535
    421433 5wmb:A (2.25) BS02 dna 2.7.7.- GO:0003684 ... P12689 29042535
    421434 5wmb:A (2.25) BS03 MG 2.7.7.- GO:0003684 ... P12689 29042535
    421435 5wmb:A (2.25) BS04 MG 2.7.7.- GO:0003684 ... P12689 29042535
    421436 5wmb:A (2.25) BS05 MG 2.7.7.- GO:0003684 ... P12689 29042535
    421437 5wmb:A (2.25) BS06 DCP 2.7.7.- GO:0003684 ... P12689 29042535
    421438 5wmd:A (1.27) BS01 6JE ? N/A O60885 29386193 BindingDB: IC50=92nM, Ki=11nM
    421439 5wmg:A (1.19) BS01 6JF ? N/A O60885 29386193
    421440 5wmh:A (3.0) BS01 PLP 2.6.1.1
    2.6.1.78
    2.6.1.79
    GO:0003824 ... Q9SIE1 29405514
    421441 5wmh:B (3.0) BS01 PLP 2.6.1.1
    2.6.1.78
    2.6.1.79
    GO:0003824 ... Q9SIE1 29405514
    421442 5wmh:C (3.0) BS01 PLP 2.6.1.1
    2.6.1.78
    2.6.1.79
    GO:0003824 ... Q9SIE1 29405514
    421443 5wmh:D (3.0) BS01 PLP 2.6.1.1
    2.6.1.78
    2.6.1.79
    GO:0003824 ... Q9SIE1 29405514
    421444 5wmh:E (3.0) BS01 PLP 2.6.1.1
    2.6.1.78
    2.6.1.79
    GO:0003824 ... Q9SIE1 29405514
    421445 5wmh:F (3.0) BS01 PLP 2.6.1.1
    2.6.1.78
    2.6.1.79
    GO:0003824 ... Q9SIE1 29405514
    421446 5wmi:A (2.0) BS01 AKG 2.6.1.1
    2.6.1.78
    2.6.1.79
    GO:0003824 ... Q9SIE1 29405514
    421447 5wml:A (2.103) BS01 PMP 2.6.1.1
    2.6.1.78
    2.6.1.79
    GO:0003824 ... Q9SIE1 29405514
    421448 5wml:A (2.103) BS02 GLU 2.6.1.1
    2.6.1.78
    2.6.1.79
    GO:0003824 ... Q9SIE1 29405514
    421449 5wml:B (2.103) BS01 PMP 2.6.1.1
    2.6.1.78
    2.6.1.79
    GO:0003824 ... Q9SIE1 29405514
    421450 5wml:B (2.103) BS02 GLU 2.6.1.1
    2.6.1.78
    2.6.1.79
    GO:0003824 ... Q9SIE1 29405514
    421451 5wmm:A (2.9) BS01 B6G ? N/A Q333U7 29556104
    421452 5wmm:A (2.9) BS02 SAH ? N/A Q333U7 29556104
    421453 5wmm:A (2.9) BS03 CA ? N/A Q333U7 29556104
    421454 5wmm:A (2.9) BS04 CA ? N/A Q333U7 29556104
    421455 5wmn:A (1.82) BS01 peptide ? N/A P01889 29735483
    421456 5wmn:C (1.82) BS01 peptide ? N/A P01889 29735483
    421457 5wmo:A (1.62) BS01 peptide ? N/A P01889 29735483
    421458 5wmp:A (1.6) BS01 peptide ? N/A P01889 29735483
    421459 5wmq:A (1.4) BS01 peptide ? N/A P01889 29735483
    421460 5wmr:A (1.58) BS01 peptide ? N/A P01889 29735483
    421461 5wms:A (1.6) BS01 ZN ? GO:0008270 ... A0A060GYS1 N/A
    421462 5wms:A (1.6) BS02 ZN ? GO:0008270 ... A0A060GYS1 N/A
    421463 5wms:G (1.6) BS01 ZN ? GO:0008270 ... A0A060GYS1 N/A
    421464 5wms:G (1.6) BS02 ZN ? GO:0008270 ... A0A060GYS1 N/A
    421465 5wms:Q (1.6) BS01 ZN ? GO:0008270 ... A0A060GYS1 N/A
    421466 5wms:Q (1.6) BS02 ZN ? GO:0008270 ... A0A060GYS1 N/A
    421467 5wms:S (1.6) BS01 ZN ? GO:0008270 ... A0A060GYS1 N/A
    421468 5wms:S (1.6) BS02 ZN ? GO:0008270 ... A0A060GYS1 N/A
    421469 5wmt:A (2.748) BS01 9QY ? GO:0005524 ... P41148 29528635 BindingDB: Ki=440nM, IC50=1100nM, Kd=1380nM
    421470 5wmt:B (2.748) BS01 MG ? GO:0005524 ... P41148 29528635
    421471 5wmt:B (2.748) BS02 9QY ? GO:0005524 ... P41148 29528635 BindingDB: Ki=440nM, IC50=1100nM, Kd=1380nM
    421472 5wmt:C (2.748) BS01 MG ? GO:0005524 ... P41148 29528635
    421473 5wmt:C (2.748) BS02 9QY ? GO:0005524 ... P41148 29528635 BindingDB: Ki=440nM, IC50=1100nM, Kd=1380nM
    421474 5wmt:D (2.748) BS01 9QY ? GO:0005524 ... P41148 29528635 BindingDB: Ki=440nM, IC50=1100nM, Kd=1380nM
    421475 5wmu:A (2.4) BS01 HEM 1.13.11.52 GO:0002376 ... P14902 29167421
    421476 5wmu:A (2.4) BS02 TRP 1.13.11.52 GO:0002376 ... P14902 29167421 MOAD: Kd=26mM
    421477 5wmu:B (2.4) BS01 HEM 1.13.11.52 GO:0002376 ... P14902 29167421
    421478 5wmu:B (2.4) BS02 TRP 1.13.11.52 GO:0002376 ... P14902 29167421 MOAD: Kd=26mM
    421479 5wmv:A (2.6) BS01 HEM 1.13.11.52 GO:0002376 ... P14902 29167421
    421480 5wmv:A (2.6) BS02 TRP 1.13.11.52 GO:0002376 ... P14902 29167421
    421481 5wmv:A (2.6) BS03 ZCW 1.13.11.52 GO:0002376 ... P14902 29167421
    421482 5wmv:B (2.6) BS01 HEM 1.13.11.52 GO:0002376 ... P14902 29167421
    421483 5wmv:B (2.6) BS02 TRP 1.13.11.52 GO:0002376 ... P14902 29167421
    421484 5wmv:B (2.6) BS03 ZCW 1.13.11.52 GO:0002376 ... P14902 29167421
    421485 5wmw:A (3.03) BS01 HEM 1.13.11.52 GO:0002376 ... P14902 29167421
    421486 5wmw:A (3.03) BS02 TRP 1.13.11.52 GO:0002376 ... P14902 29167421
    421487 5wmw:A (3.03) BS03 TRP 1.13.11.52 GO:0002376 ... P14902 29167421
    421488 5wmw:B (3.03) BS01 HEM 1.13.11.52 GO:0002376 ... P14902 29167421
    421489 5wmw:B (3.03) BS02 TRP 1.13.11.52 GO:0002376 ... P14902 29167421
    421490 5wmw:B (3.03) BS03 TRP 1.13.11.52 GO:0002376 ... P14902 29167421
    421491 5wmx:A (2.69) BS01 HEM 1.13.11.52 GO:0002376 ... P14902 29167421
    421492 5wmx:A (2.69) BS02 TRP 1.13.11.52 GO:0002376 ... P14902 29167421
    421493 5wmx:A (2.69) BS03 ZCW 1.13.11.52 GO:0002376 ... P14902 29167421
    421494 5wmx:B (2.69) BS01 HEM 1.13.11.52 GO:0002376 ... P14902 29167421
    421495 5wmx:B (2.69) BS02 TRP 1.13.11.52 GO:0002376 ... P14902 29167421
    421496 5wmx:B (2.69) BS03 ZCW 1.13.11.52 GO:0002376 ... P14902 29167421
    421497 5wn0:A (2.6) BS01 dna 3.1.11.2
    3.1.21.-
    GO:0003677 ... P27695 29374164
    421498 5wn0:A (2.6) BS02 dna 3.1.11.2
    3.1.21.-
    GO:0003677 ... P27695 29374164
    421499 5wn0:A (2.6) BS03 dna 3.1.11.2
    3.1.21.-
    GO:0003677 ... P27695 29374164
    421500 5wn1:A (2.3) BS01 dna 3.1.11.2
    3.1.21.-
    GO:0003677 ... P27695 29374164
    421501 5wn1:A (2.3) BS02 dna 3.1.11.2
    3.1.21.-
    GO:0003677 ... P27695 29374164
    421502 5wn2:A (2.288) BS01 dna 3.1.11.2
    3.1.21.-
    GO:0003677 ... P27695 29374164
    421503 5wn2:A (2.288) BS02 dna 3.1.11.2
    3.1.21.-
    GO:0003677 ... P27695 29374164
    421504 5wn2:A (2.288) BS03 dna 3.1.11.2
    3.1.21.-
    GO:0003677 ... P27695 29374164
    421505 5wn2:A (2.288) BS04 PGA 3.1.11.2
    3.1.21.-
    GO:0003677 ... P27695 29374164
    421506 5wn3:B (2.0) BS01 dna 3.1.11.2
    3.1.21.-
    GO:0003677 ... P27695 29374164
    421507 5wn3:B (2.0) BS02 dna 3.1.11.2
    3.1.21.-
    GO:0003677 ... P27695 29374164
    421508 5wn3:B (2.0) BS03 dna 3.1.11.2
    3.1.21.-
    GO:0003677 ... P27695 29374164
    421509 5wn4:B (2.1) BS01 dna 3.1.11.2
    3.1.21.-
    GO:0003677 ... P27695 29374164
    421510 5wn4:B (2.1) BS02 dna 3.1.11.2
    3.1.21.-
    GO:0003677 ... P27695 29374164
    421511 5wn4:B (2.1) BS03 dna 3.1.11.2
    3.1.21.-
    GO:0003677 ... P27695 29374164
    421512 5wn5:A (2.2) BS01 MN 3.1.11.2
    3.1.21.-
    GO:0003677 ... P27695 29374164
    421513 5wn5:B (2.2) BS01 dna 3.1.11.2
    3.1.21.-
    GO:0003677 ... P27695 29374164
    421514 5wn5:B (2.2) BS02 dna 3.1.11.2
    3.1.21.-
    GO:0003677 ... P27695 29374164
    421515 5wn5:B (2.2) BS03 dna 3.1.11.2
    3.1.21.-
    GO:0003677 ... P27695 29374164
    421516 5wn5:B (2.2) BS04 MN 3.1.11.2
    3.1.21.-
    GO:0003677 ... P27695 29374164
    421517 5wn8:A (2.5) BS01 HEM 1.13.11.52 GO:0002376 ... P14902 29167421
    421518 5wn8:A (2.5) BS02 BBJ 1.13.11.52 GO:0002376 ... P14902 29167421 BindingDB: IC50=72nM, EC50=8.0nM, Kd=3460nM
    421519 5wn8:B (2.5) BS01 HEM 1.13.11.52 GO:0002376 ... P14902 29167421
    421520 5wn8:B (2.5) BS02 BBJ 1.13.11.52 GO:0002376 ... P14902 29167421 BindingDB: IC50=72nM, EC50=8.0nM, Kd=3460nM
    421521 5wn9:H (1.551) BS01 peptide N/A N/A N/A 29523582
    421522 5wnb:H (2.4) BS01 peptide N/A N/A N/A 29523582
    421523 5wnb:H (2.4) BS02 ZN N/A N/A N/A 29523582
    421524 5wnb:H (2.4) BS03 ZN N/A N/A N/A 29523582
    421525 5wnb:I (2.4) BS01 peptide N/A N/A N/A 29523582
    421526 5wnb:I (2.4) BS02 ZN N/A N/A N/A 29523582
    421527 5wnb:L (2.4) BS01 peptide N/A N/A N/A 29523582
    421528 5wnb:L (2.4) BS02 ZN N/A N/A N/A 29523582
    421529 5wnb:L (2.4) BS03 ZN N/A N/A N/A 29523582
    421530 5wnb:L (2.4) BS04 ZN N/A N/A N/A 29523582
    421531 5wnb:M (2.4) BS01 peptide N/A N/A N/A 29523582
    421532 5wnb:M (2.4) BS02 ZN N/A N/A N/A 29523582
    421533 5wnb:M (2.4) BS03 ZN N/A N/A N/A 29523582
    421534 5wne:A (2.6) BS01 B4J 2.7.11.1 GO:0004672 ... Q13464 N/A
    421535 5wne:B (2.6) BS01 B4J 2.7.11.1 GO:0004672 ... Q13464 N/A
    421536 5wne:C (2.6) BS01 B4J 2.7.11.1 GO:0004672 ... Q13464 N/A
    421537 5wne:D (2.6) BS01 B4J 2.7.11.1 GO:0004672 ... Q13464 N/A
    421538 5wnf:A (2.45) BS01 B4V 2.7.11.1 GO:0004672 ... Q13464 N/A
    421539 5wnf:B (2.45) BS01 B4V 2.7.11.1 GO:0004672 ... Q13464 N/A
    421540 5wnf:C (2.45) BS01 B4V 2.7.11.1 GO:0004672 ... Q13464 N/A
    421541 5wnf:D (2.45) BS01 B4V 2.7.11.1 GO:0004672 ... Q13464 N/A
    421542 5wng:A (2.9) BS01 B4Y 2.7.11.1 GO:0004672 ... Q13464 N/A
    421543 5wng:B (2.9) BS01 B4Y 2.7.11.1 GO:0004672 ... Q13464 N/A
    421544 5wng:C (2.9) BS01 B4Y 2.7.11.1 GO:0004672 ... Q13464 N/A
    421545 5wng:D (2.9) BS01 B4Y 2.7.11.1 GO:0004672 ... Q13464 N/A
    421546 5wnh:A (3.1) BS01 B5G 2.7.11.1 GO:0004672 ... Q13464 N/A
    421547 5wnh:B (3.1) BS01 B5G 2.7.11.1 GO:0004672 ... Q13464 N/A
    421548 5wnh:C (3.1) BS01 B5G 2.7.11.1 GO:0004672 ... Q13464 N/A
    421549 5wnh:D (3.1) BS01 B5G 2.7.11.1 GO:0004672 ... Q13464 N/A
    421550 5wni:A (2.65) BS01 MG 2.7.11.1 GO:0004672 ... Q9ERK0 29706531
    421551 5wni:A (2.65) BS02 ATP 2.7.11.1 GO:0004672 ... Q9ERK0 29706531
    421552 5wnj:A (2.55) BS01 2V9 2.7.11.1 GO:0004672 ... Q9ERK0 29706531
    421553 5wnk:A (3.11) BS01 B6J 2.7.11.1 GO:0004672 ... Q9ERK0 29706531
    421554 5wnl:A (2.5) BS01 STU 2.7.11.1 GO:0004672 ... Q9ERK0 29706531
    421555 5wnm:A (2.6) BS01 VX6 2.7.11.1 GO:0004672 ... Q9ERK0 29706531
    421556 5wno:A (2.386) BS01 ANP 2.7.10.1 GO:0004672 ... P24348 29358026
    421557 5wno:A (2.386) BS02 MG 2.7.10.1 GO:0004672 ... P24348 29358026
    421558 5wnp:B (3.3) BS01 rna ? GO:0003735 ... P80371 29459784
    421559 5wnp:C (3.3) BS01 rna ? GO:0003676 ... P80372 29459784
    421560 5wnp:D (3.3) BS01 rna ? GO:0003723 ... P80373 29459784
    421561 5wnp:D (3.3) BS02 MG ? GO:0003723 ... P80373 29459784
    421562 5wnp:E (3.3) BS01 rna ? GO:0003723 ... Q5SHQ5 29459784
    421563 5wnp:F (3.3) BS01 rna ? GO:0003735 ... Q5SLP8 29459784
    421564 5wnp:F (3.3) BS02 MG ? GO:0003735 ... Q5SLP8 29459784
    421565 5wnp:G (3.3) BS01 rna ? GO:0000049 ... P17291 29459784
    421566 5wnp:H (3.3) BS01 rna ? GO:0003735 ... P0DOY9 29459784
    421567 5wnp:I (3.3) BS01 rna ? GO:0000049 ... P80374 29459784
    421568 5wnp:J (3.3) BS01 rna ? GO:0000049 ... Q5SHN7 29459784
    421569 5wnp:K (3.3) BS01 rna ? GO:0003735 ... P80376 29459784
    421570 5wnp:L (3.3) BS01 rna ? GO:0000049 ... Q5SHN3 29459784
    421571 5wnp:M (3.3) BS01 rna ? GO:0000049 ... P80377 29459784
    421572 5wnp:M (3.3) BS02 MG ? GO:0000049 ... P80377 29459784
    421573 5wnp:N (3.3) BS01 rna ? GO:0003735 ... P0DOY6 29459784
    421574 5wnp:N (3.3) BS02 ZN ? GO:0003735 ... P0DOY6 29459784
    421575 5wnp:O (3.3) BS01 rna ? GO:0003735 ... Q5SJ76 29459784
    421576 5wnp:P (3.3) BS01 rna ? GO:0003735 ... Q5SJH3 29459784
    421577 5wnp:Q (3.3) BS01 rna ? GO:0003735 ... P0DOY7 29459784
    421578 5wnp:Q (3.3) BS02 MG ? GO:0003735 ... P0DOY7 29459784
    421579 5wnp:R (3.3) BS01 rna ? GO:0003735 ... Q5SLQ0 29459784
    421580 5wnp:S (3.3) BS01 rna ? GO:0003723 ... Q5SHP2 29459784
    421581 5wnp:S (3.3) BS02 MG ? GO:0003723 ... Q5SHP2 29459784
    421582 5wnp:T (3.3) BS01 rna ? GO:0003723 ... P80380 29459784
    421583 5wnp:T (3.3) BS02 MG ? GO:0003723 ... P80380 29459784
    421584 5wnq:B (3.5) BS01 rna ? GO:0003735 ... P80371 29459784
    421585 5wnq:B (3.5) BS02 MG ? GO:0003735 ... P80371 29459784
    421586 5wnq:B (3.5) BS03 MG ? GO:0003735 ... P80371 29459784
    421587 5wnq:C (3.5) BS01 rna ? GO:0003676 ... P80372 29459784
    421588 5wnq:C (3.5) BS02 MG ? GO:0003676 ... P80372 29459784
    421589 5wnq:C (3.5) BS03 MG ? GO:0003676 ... P80372 29459784
    421590 5wnq:C (3.5) BS04 MG ? GO:0003676 ... P80372 29459784
    421591 5wnq:D (3.5) BS01 rna ? GO:0003723 ... P80373 29459784
    421592 5wnq:D (3.5) BS02 MG ? GO:0003723 ... P80373 29459784
    421593 5wnq:E (3.5) BS01 rna ? GO:0003723 ... Q5SHQ5 29459784
    421594 5wnq:F (3.5) BS01 rna ? GO:0003735 ... Q5SLP8 29459784
    421595 5wnq:G (3.5) BS01 rna ? GO:0000049 ... P17291 29459784
    421596 5wnq:H (3.5) BS01 rna ? GO:0003735 ... P0DOY9 29459784
    421597 5wnq:I (3.5) BS01 rna ? GO:0000049 ... P80374 29459784
    421598 5wnq:J (3.5) BS01 rna ? GO:0000049 ... Q5SHN7 29459784
    421599 5wnq:J (3.5) BS02 MG ? GO:0000049 ... Q5SHN7 29459784
    421600 5wnq:K (3.5) BS01 rna ? GO:0003735 ... P80376 29459784

    Reference:
  • Chengxin Zhang, Xi Zhang, Lydia Freddolino, and Yang Zhang. BioLiP2: an updated structure database for biologically relevent ligand-protein interactions, Nucleic Acids Research, gkad630 (2023).
  • Jianyi Yang, Ambrish Roy, and Yang Zhang. BioLiP: a semi-manually curated database for biologically relevant ligand-protein interactions, Nucleic Acids Research, 41: D1096-D1103 (2013) (download the PDF file).