SEQ2FUN

BioLiP
Download all results in tab-seperated text for 942758 receptor-ligand interactions, whose format is explained at readme.txt.
  • Hover over PDB to view the title of the structure. Click PDB to view the structure at the RCSB PDB database. Resolution -1.00 means the resolution is unavailable, e.g., for NMR structures.
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  • Hover over Ligand to view the full ligand name. Click Ligand to view the 2D diagram and other detail information of the ligand.
  • Hover over EC number to view the full name of enzymatic activity.
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    # PDB
    (Resolution Å)
    Site # Ligand EC number GO terms UniProt PubMed Binding
    affinity
    422001 5wr6:A (2.3) BS04 CA 3.4.24.27 GO:0004222 ... P43133 28777085
    422002 5wr6:A (2.3) BS05 CA 3.4.24.27 GO:0004222 ... P43133 28777085
    422003 5wr6:A (2.3) BS06 CA 3.4.24.27 GO:0004222 ... P43133 28777085
    422004 5wr7:A (2.76) BS01 RCH 2.7.10.1 GO:0004672 ... P04629 30242093 BindingDB: IC50=1.5nM
    422005 5wrc:A (1.5) BS01 PR 3.4.21.64 GO:0004252 ... P06873 28386083
    422006 5wrc:A (1.5) BS02 PR 3.4.21.64 GO:0004252 ... P06873 28386083
    422007 5wrd:A (1.9) BS01 peptide ? GO:0000421 ... Q9CQV6 28291748
    422008 5wrd:B (1.9) BS01 peptide ? GO:0000421 ... Q9CQV6 28291748
    422009 5wre:A (1.946) BS01 7TL ? GO:0005198 ... L7R9I1 28205569 MOAD: ic50=0.39uM
    422010 5wre:A (1.946) BS02 7TL ? GO:0005198 ... L7R9I1 28205569 MOAD: ic50=0.39uM
    422011 5wre:B (1.946) BS01 7TL ? GO:0005198 ... L7R9I1 28205569 MOAD: ic50=0.39uM
    422012 5wre:C (1.946) BS01 7TL ? GO:0005198 ... L7R9I1 28205569 MOAD: ic50=0.39uM
    422013 5wre:C (1.946) BS02 7TL ? GO:0005198 ... L7R9I1 28205569 MOAD: ic50=0.39uM
    422014 5wre:D (1.946) BS01 7TL ? GO:0005198 ... L7R9I1 28205569 MOAD: ic50=0.39uM
    422015 5wre:E (1.946) BS01 7TL ? GO:0005198 ... L7R9I1 28205569 MOAD: ic50=0.39uM
    422016 5wre:E (1.946) BS02 7TL ? GO:0005198 ... L7R9I1 28205569 MOAD: ic50=0.39uM
    422017 5wre:F (1.946) BS01 7TL ? GO:0005198 ... L7R9I1 28205569 MOAD: ic50=0.39uM
    422018 5wri:A (1.6) BS01 peptide 2.8.2.20 GO:0006478 ... O60507 28821720
    422019 5wri:A (1.6) BS02 peptide 2.8.2.20 GO:0006478 ... O60507 28821720
    422020 5wri:A (1.6) BS03 A3P 2.8.2.20 GO:0006478 ... O60507 28821720
    422021 5wri:A (1.6) BS04 MG 2.8.2.20 GO:0006478 ... O60507 28821720
    422022 5wri:B (1.6) BS01 peptide 2.8.2.20 GO:0006478 ... O60507 28821720
    422023 5wri:B (1.6) BS02 peptide 2.8.2.20 GO:0006478 ... O60507 28821720
    422024 5wri:B (1.6) BS03 A3P 2.8.2.20 GO:0006478 ... O60507 28821720
    422025 5wri:B (1.6) BS04 MG 2.8.2.20 GO:0006478 ... O60507 28821720
    422026 5wri:B (1.6) BS05 ZN 2.8.2.20 GO:0006478 ... O60507 28821720
    422027 5wrj:A (2.31) BS01 peptide 2.8.2.20 GO:0006478 ... O60507 28821720
    422028 5wrj:A (2.31) BS02 peptide 2.8.2.20 GO:0006478 ... O60507 28821720
    422029 5wrj:A (2.31) BS03 A3P 2.8.2.20 GO:0006478 ... O60507 28821720
    422030 5wrj:A (2.31) BS04 MG 2.8.2.20 GO:0006478 ... O60507 28821720
    422031 5wrj:B (2.31) BS01 peptide 2.8.2.20 GO:0006478 ... O60507 28821720
    422032 5wrj:B (2.31) BS02 peptide 2.8.2.20 GO:0006478 ... O60507 28821720
    422033 5wrj:B (2.31) BS03 A3P 2.8.2.20 GO:0006478 ... O60507 28821720
    422034 5wrj:B (2.31) BS04 MG 2.8.2.20 GO:0006478 ... O60507 28821720
    422035 5wrj:C (2.31) BS01 peptide 2.8.2.20 GO:0006478 ... O60507 28821720
    422036 5wrj:C (2.31) BS02 A3P 2.8.2.20 GO:0006478 ... O60507 28821720
    422037 5wrj:C (2.31) BS03 MG 2.8.2.20 GO:0006478 ... O60507 28821720
    422038 5wrj:D (2.31) BS01 peptide 2.8.2.20 GO:0006478 ... O60507 28821720
    422039 5wrj:D (2.31) BS02 A3P 2.8.2.20 GO:0006478 ... O60507 28821720
    422040 5wrj:D (2.31) BS03 MG 2.8.2.20 GO:0006478 ... O60507 28821720
    422041 5wrk:A (2.62) BS01 peptide ? GO:0006886 ... P84092 29661273
    422042 5wrl:A (3.095) BS01 peptide ? GO:0006886 ... P84092 29661273
    422043 5wrm:A (2.597) BS01 peptide ? GO:0006886 ... P84092 29661273
    422044 5wrn:A (2.39) BS01 DC 2.1.1.45 GO:0000900 ... P04818 N/A
    422045 5wrn:A (2.39) BS02 DC 2.1.1.45 GO:0000900 ... P04818 N/A
    422046 5wrn:B (2.39) BS01 DC 2.1.1.45 GO:0000900 ... P04818 N/A
    422047 5wrn:B (2.39) BS02 DC 2.1.1.45 GO:0000900 ... P04818 N/A
    422048 5wrn:C (2.39) BS01 DC 2.1.1.45 GO:0000900 ... P04818 N/A
    422049 5wrn:C (2.39) BS02 DC 2.1.1.45 GO:0000900 ... P04818 N/A
    422050 5wrn:D (2.39) BS01 DC 2.1.1.45 GO:0000900 ... P04818 N/A
    422051 5wrn:D (2.39) BS02 DC 2.1.1.45 GO:0000900 ... P04818 N/A
    422052 5wrn:E (2.39) BS01 DC 2.1.1.45 GO:0000900 ... P04818 N/A
    422053 5wrn:E (2.39) BS02 DC 2.1.1.45 GO:0000900 ... P04818 N/A
    422054 5wrn:F (2.39) BS01 DC 2.1.1.45 GO:0000900 ... P04818 N/A
    422055 5wrn:F (2.39) BS02 DC 2.1.1.45 GO:0000900 ... P04818 N/A
    422056 5wrp:A (2.85) BS01 PO4 2.7.1.40 GO:0000287 ... P9WKE5 29215013
    422057 5wrp:B (2.85) BS01 PO4 2.7.1.40 GO:0000287 ... P9WKE5 29215013
    422058 5wrp:C (2.85) BS01 PO4 2.7.1.40 GO:0000287 ... P9WKE5 29215013
    422059 5wrp:D (2.85) BS01 PO4 2.7.1.40 GO:0000287 ... P9WKE5 29215013
    422060 5wrq:A (2.65) BS01 7TX 2.4.2.-
    2.4.2.30
    GO:0003950 ... P09874 N/A
    422061 5wrq:B (2.65) BS01 7TX 2.4.2.-
    2.4.2.30
    GO:0003950 ... P09874 N/A
    422062 5wrs:A (2.75) BS01 ATP ? N/A Q96MK3 28432788
    422063 5wrs:B (2.75) BS01 ATP ? N/A Q96MK3 28432788
    422064 5wrt:A (2.348) BS01 MG 3.6.1.1 GO:0000287 ... Q4VUZ3 28701714
    422065 5wrt:B (2.348) BS01 MG 3.6.1.1 GO:0000287 ... Q4VUZ3 28701714
    422066 5wru:B (3.193) BS01 PO4 3.6.1.1 GO:0000287 ... O77392 28701714
    422067 5wrv:B (1.7) BS01 peptide ? GO:0006614 ... O76094 28369529
    422068 5wry:A (2.3) BS01 4YR 2.4.2.-
    2.4.2.30
    GO:0003950 ... P09874 N/A BindingDB: IC50=13nM
    422069 5wry:B (2.3) BS01 4YR 2.4.2.-
    2.4.2.30
    GO:0003950 ... P09874 N/A BindingDB: IC50=13nM
    422070 5wrz:A (2.2) BS01 7U3 2.4.2.-
    2.4.2.30
    GO:0003950 ... P09874 N/A
    422071 5wrz:B (2.2) BS01 7U3 2.4.2.-
    2.4.2.30
    GO:0003950 ... P09874 N/A
    422072 5ws0:A (2.6) BS01 7U6 2.4.2.-
    2.4.2.30
    GO:0003950 ... P09874 N/A BindingDB: IC50=42nM
    422073 5ws0:B (2.6) BS01 7U6 2.4.2.-
    2.4.2.30
    GO:0003950 ... P09874 N/A BindingDB: IC50=42nM
    422074 5ws1:A (1.9) BS01 7U9 2.4.2.-
    2.4.2.30
    GO:0003950 ... P09874 N/A BindingDB: IC50=15nM
    422075 5ws1:B (1.9) BS01 7U9 2.4.2.-
    2.4.2.30
    GO:0003950 ... P09874 N/A BindingDB: IC50=15nM
    422076 5ws2:A (2.398) BS01 rna N/A GO:0003723 ... N/A 28795788
    422077 5ws2:A (2.398) BS02 ZN N/A GO:0003723 ... N/A 28795788
    422078 5ws2:A (2.398) BS03 ZN N/A GO:0003723 ... N/A 28795788
    422079 5ws2:B (2.398) BS01 rna N/A GO:0003723 ... N/A 28795788
    422080 5ws2:B (2.398) BS02 ZN N/A GO:0003723 ... N/A 28795788
    422081 5ws2:B (2.398) BS03 ZN N/A GO:0003723 ... N/A 28795788
    422082 5ws3:A (2.3) BS01 7MA ? GO:0004930 ... O43614
    Q9V2J8
    29225076
    422083 5ws4:A (3.4) BS01 AT4 3.6.3.- GO:0005524 ... A0A0D8G707 29109439
    422084 5ws4:B (3.4) BS01 AT4 3.6.3.- GO:0005524 ... A0A0D8G707 29109439
    422085 5ws5:A (2.35) BS01 FE2 1.10.3.9 GO:0005506 ... P51765 28219079
    422086 5ws5:A (2.35) BS02 CLA 1.10.3.9 GO:0005506 ... P51765 28219079
    422087 5ws5:A (2.35) BS03 CLA 1.10.3.9 GO:0005506 ... P51765 28219079
    422088 5ws5:A (2.35) BS04 CLA 1.10.3.9 GO:0005506 ... P51765 28219079
    422089 5ws5:A (2.35) BS05 PHO 1.10.3.9 GO:0005506 ... P51765 28219079
    422090 5ws5:A (2.35) BS06 CLA 1.10.3.9 GO:0005506 ... P51765 28219079
    422091 5ws5:A (2.35) BS07 OEX 1.10.3.9 GO:0005506 ... P51765 28219079
    422092 5ws5:A (2.35) BS08 BCT 1.10.3.9 GO:0005506 ... P51765 28219079
    422093 5ws5:A (2.35) BS09 PHO 1.10.3.9 GO:0005506 ... P51765 28219079
    422094 5ws5:A (2.35) BS10 CLA 1.10.3.9 GO:0005506 ... P51765 28219079
    422095 5ws5:B (2.35) BS01 CLA ? GO:0009521 ... D0VWR1 28219079
    422096 5ws5:B (2.35) BS02 CLA ? GO:0009521 ... D0VWR1 28219079
    422097 5ws5:B (2.35) BS03 CLA ? GO:0009521 ... D0VWR1 28219079
    422098 5ws5:B (2.35) BS04 CLA ? GO:0009521 ... D0VWR1 28219079
    422099 5ws5:B (2.35) BS05 CLA ? GO:0009521 ... D0VWR1 28219079
    422100 5ws5:B (2.35) BS06 CLA ? GO:0009521 ... D0VWR1 28219079
    422101 5ws5:B (2.35) BS07 CLA ? GO:0009521 ... D0VWR1 28219079
    422102 5ws5:B (2.35) BS08 CLA ? GO:0009521 ... D0VWR1 28219079
    422103 5ws5:B (2.35) BS09 CLA ? GO:0009521 ... D0VWR1 28219079
    422104 5ws5:B (2.35) BS10 CLA ? GO:0009521 ... D0VWR1 28219079
    422105 5ws5:B (2.35) BS11 CLA ? GO:0009521 ... D0VWR1 28219079
    422106 5ws5:B (2.35) BS12 CLA ? GO:0009521 ... D0VWR1 28219079
    422107 5ws5:B (2.35) BS13 CLA ? GO:0009521 ... D0VWR1 28219079
    422108 5ws5:B (2.35) BS14 CLA ? GO:0009521 ... D0VWR1 28219079
    422109 5ws5:B (2.35) BS15 CLA ? GO:0009521 ... D0VWR1 28219079
    422110 5ws5:B (2.35) BS16 CLA ? GO:0009521 ... D0VWR1 28219079
    422111 5ws5:C (2.35) BS01 OEX ? GO:0005737 ... D0VWR7 28219079
    422112 5ws5:C (2.35) BS02 CLA ? GO:0005737 ... D0VWR7 28219079
    422113 5ws5:C (2.35) BS03 CLA ? GO:0005737 ... D0VWR7 28219079
    422114 5ws5:C (2.35) BS04 CLA ? GO:0005737 ... D0VWR7 28219079
    422115 5ws5:C (2.35) BS05 CLA ? GO:0005737 ... D0VWR7 28219079
    422116 5ws5:C (2.35) BS06 CLA ? GO:0005737 ... D0VWR7 28219079
    422117 5ws5:C (2.35) BS07 CLA ? GO:0005737 ... D0VWR7 28219079
    422118 5ws5:C (2.35) BS08 CLA ? GO:0005737 ... D0VWR7 28219079
    422119 5ws5:C (2.35) BS09 CLA ? GO:0005737 ... D0VWR7 28219079
    422120 5ws5:C (2.35) BS10 CLA ? GO:0005737 ... D0VWR7 28219079
    422121 5ws5:C (2.35) BS11 CLA ? GO:0005737 ... D0VWR7 28219079
    422122 5ws5:C (2.35) BS12 CLA ? GO:0005737 ... D0VWR7 28219079
    422123 5ws5:C (2.35) BS13 CLA ? GO:0005737 ... D0VWR7 28219079
    422124 5ws5:C (2.35) BS14 CLA ? GO:0005737 ... D0VWR7 28219079
    422125 5ws5:C (2.35) BS15 CA ? GO:0005737 ... D0VWR7 28219079
    422126 5ws5:D (2.35) BS01 FE2 1.10.3.9 GO:0005737 ... D0VWR8 28219079
    422127 5ws5:D (2.35) BS02 CLA 1.10.3.9 GO:0005737 ... D0VWR8 28219079
    422128 5ws5:D (2.35) BS03 CLA 1.10.3.9 GO:0005737 ... D0VWR8 28219079
    422129 5ws5:D (2.35) BS04 PHO 1.10.3.9 GO:0005737 ... D0VWR8 28219079
    422130 5ws5:D (2.35) BS05 BCT 1.10.3.9 GO:0005737 ... D0VWR8 28219079
    422131 5ws5:D (2.35) BS06 PHO 1.10.3.9 GO:0005737 ... D0VWR8 28219079
    422132 5ws5:D (2.35) BS07 CLA 1.10.3.9 GO:0005737 ... D0VWR8 28219079
    422133 5ws5:D (2.35) BS08 CLA 1.10.3.9 GO:0005737 ... D0VWR8 28219079
    422134 5ws5:D (2.35) BS09 CLA 1.10.3.9 GO:0005737 ... D0VWR8 28219079
    422135 5ws5:E (2.35) BS01 HEM ? GO:0005506 ... P12238 28219079
    422136 5ws5:F (2.35) BS01 HEM ? GO:0005506 ... P12239 28219079
    422137 5ws5:H (2.35) BS01 CLA ? GO:0009523 ... P19052 28219079
    422138 5ws5:H (2.35) BS02 CLA ? GO:0009523 ... P19052 28219079
    422139 5ws5:H (2.35) BS03 CLA ? GO:0009523 ... P19052 28219079
    422140 5ws5:I (2.35) BS01 CLA ? GO:0005737 ... P12240 28219079
    422141 5ws5:J (2.35) BS01 MG ? GO:0009523 ... Q7DGD4 28219079
    422142 5ws5:K (2.35) BS01 peptide ? GO:0005737 ... P19054 28219079
    422143 5ws5:K (2.35) BS02 CLA ? GO:0005737 ... P19054 28219079
    422144 5ws5:K (2.35) BS03 CLA ? GO:0005737 ... P19054 28219079
    422145 5ws5:O (2.35) BS01 CA ? GO:0009523 ... D0VWR2 28219079
    422146 5ws5:V (2.35) BS01 HEC ? GO:0005506 ... P0A387 28219079
    422147 5ws5:Z (2.35) BS01 peptide ? GO:0009523 ... D0VWR5 28219079
    422148 5ws5:Z (2.35) BS02 CLA ? GO:0009523 ... D0VWR5 28219079
    422149 5ws5:a (2.35) BS01 FE2 1.10.3.9 GO:0005506 ... P51765 28219079
    422150 5ws5:a (2.35) BS02 BCT 1.10.3.9 GO:0005506 ... P51765 28219079
    422151 5ws5:a (2.35) BS03 CLA 1.10.3.9 GO:0005506 ... P51765 28219079
    422152 5ws5:a (2.35) BS04 CLA 1.10.3.9 GO:0005506 ... P51765 28219079
    422153 5ws5:a (2.35) BS05 CLA 1.10.3.9 GO:0005506 ... P51765 28219079
    422154 5ws5:a (2.35) BS06 PHO 1.10.3.9 GO:0005506 ... P51765 28219079
    422155 5ws5:a (2.35) BS07 CLA 1.10.3.9 GO:0005506 ... P51765 28219079
    422156 5ws5:a (2.35) BS08 OEX 1.10.3.9 GO:0005506 ... P51765 28219079
    422157 5ws5:a (2.35) BS09 PHO 1.10.3.9 GO:0005506 ... P51765 28219079
    422158 5ws5:a (2.35) BS10 CLA 1.10.3.9 GO:0005506 ... P51765 28219079
    422159 5ws5:b (2.35) BS01 CLA ? GO:0009521 ... D0VWR1 28219079
    422160 5ws5:b (2.35) BS02 CLA ? GO:0009521 ... D0VWR1 28219079
    422161 5ws5:b (2.35) BS03 CLA ? GO:0009521 ... D0VWR1 28219079
    422162 5ws5:b (2.35) BS04 CLA ? GO:0009521 ... D0VWR1 28219079
    422163 5ws5:b (2.35) BS05 CLA ? GO:0009521 ... D0VWR1 28219079
    422164 5ws5:b (2.35) BS06 CLA ? GO:0009521 ... D0VWR1 28219079
    422165 5ws5:b (2.35) BS07 CLA ? GO:0009521 ... D0VWR1 28219079
    422166 5ws5:b (2.35) BS08 CLA ? GO:0009521 ... D0VWR1 28219079
    422167 5ws5:b (2.35) BS09 CLA ? GO:0009521 ... D0VWR1 28219079
    422168 5ws5:b (2.35) BS10 CLA ? GO:0009521 ... D0VWR1 28219079
    422169 5ws5:b (2.35) BS11 CLA ? GO:0009521 ... D0VWR1 28219079
    422170 5ws5:b (2.35) BS12 CLA ? GO:0009521 ... D0VWR1 28219079
    422171 5ws5:b (2.35) BS13 CLA ? GO:0009521 ... D0VWR1 28219079
    422172 5ws5:b (2.35) BS14 CLA ? GO:0009521 ... D0VWR1 28219079
    422173 5ws5:b (2.35) BS15 CLA ? GO:0009521 ... D0VWR1 28219079
    422174 5ws5:b (2.35) BS16 CLA ? GO:0009521 ... D0VWR1 28219079
    422175 5ws5:c (2.35) BS01 OEX ? GO:0005737 ... D0VWR7 28219079
    422176 5ws5:c (2.35) BS02 CLA ? GO:0005737 ... D0VWR7 28219079
    422177 5ws5:c (2.35) BS03 CLA ? GO:0005737 ... D0VWR7 28219079
    422178 5ws5:c (2.35) BS04 CLA ? GO:0005737 ... D0VWR7 28219079
    422179 5ws5:c (2.35) BS05 CLA ? GO:0005737 ... D0VWR7 28219079
    422180 5ws5:c (2.35) BS06 CLA ? GO:0005737 ... D0VWR7 28219079
    422181 5ws5:c (2.35) BS07 CLA ? GO:0005737 ... D0VWR7 28219079
    422182 5ws5:c (2.35) BS08 CLA ? GO:0005737 ... D0VWR7 28219079
    422183 5ws5:c (2.35) BS09 CLA ? GO:0005737 ... D0VWR7 28219079
    422184 5ws5:c (2.35) BS10 CLA ? GO:0005737 ... D0VWR7 28219079
    422185 5ws5:c (2.35) BS11 CLA ? GO:0005737 ... D0VWR7 28219079
    422186 5ws5:c (2.35) BS12 CLA ? GO:0005737 ... D0VWR7 28219079
    422187 5ws5:c (2.35) BS13 CLA ? GO:0005737 ... D0VWR7 28219079
    422188 5ws5:c (2.35) BS14 CLA ? GO:0005737 ... D0VWR7 28219079
    422189 5ws5:c (2.35) BS15 CA ? GO:0005737 ... D0VWR7 28219079
    422190 5ws5:c (2.35) BS16 CA ? GO:0005737 ... D0VWR7 28219079
    422191 5ws5:d (2.35) BS01 FE2 1.10.3.9 GO:0005737 ... D0VWR8 28219079
    422192 5ws5:d (2.35) BS02 BCT 1.10.3.9 GO:0005737 ... D0VWR8 28219079
    422193 5ws5:d (2.35) BS03 CLA 1.10.3.9 GO:0005737 ... D0VWR8 28219079
    422194 5ws5:d (2.35) BS04 CLA 1.10.3.9 GO:0005737 ... D0VWR8 28219079
    422195 5ws5:d (2.35) BS05 CLA 1.10.3.9 GO:0005737 ... D0VWR8 28219079
    422196 5ws5:d (2.35) BS06 PHO 1.10.3.9 GO:0005737 ... D0VWR8 28219079
    422197 5ws5:d (2.35) BS07 PHO 1.10.3.9 GO:0005737 ... D0VWR8 28219079
    422198 5ws5:d (2.35) BS08 CLA 1.10.3.9 GO:0005737 ... D0VWR8 28219079
    422199 5ws5:d (2.35) BS09 CLA 1.10.3.9 GO:0005737 ... D0VWR8 28219079
    422200 5ws5:d (2.35) BS10 CLA 1.10.3.9 GO:0005737 ... D0VWR8 28219079

    Reference:
  • Chengxin Zhang, Xi Zhang, Lydia Freddolino, and Yang Zhang. BioLiP2: an updated structure database for biologically relevent ligand-protein interactions, Nucleic Acids Research, gkad630 (2023).
  • Jianyi Yang, Ambrish Roy, and Yang Zhang. BioLiP: a semi-manually curated database for biologically relevant ligand-protein interactions, Nucleic Acids Research, 41: D1096-D1103 (2013) (download the PDF file).