SEQ2FUN

BioLiP
Download all results in tab-seperated text for 942758 receptor-ligand interactions, whose format is explained at readme.txt.
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    # PDB
    (Resolution Å)
    Site # Ligand EC number GO terms UniProt PubMed Binding
    affinity
    422401 5wsb:C (2.25) BS01 AMP 2.7.1.40 GO:0000287 ... P9WKE5 29215013
    422402 5wsb:C (2.25) BS02 G6P 2.7.1.40 GO:0000287 ... P9WKE5 29215013
    422403 5wsb:C (2.25) BS03 MG 2.7.1.40 GO:0000287 ... P9WKE5 29215013
    422404 5wsb:C (2.25) BS04 OXL 2.7.1.40 GO:0000287 ... P9WKE5 29215013
    422405 5wsb:C (2.25) BS05 PO4 2.7.1.40 GO:0000287 ... P9WKE5 29215013
    422406 5wsb:D (2.25) BS01 AMP 2.7.1.40 GO:0000287 ... P9WKE5 29215013
    422407 5wsb:D (2.25) BS02 G6P 2.7.1.40 GO:0000287 ... P9WKE5 29215013
    422408 5wsb:D (2.25) BS03 MG 2.7.1.40 GO:0000287 ... P9WKE5 29215013
    422409 5wsb:D (2.25) BS04 OXL 2.7.1.40 GO:0000287 ... P9WKE5 29215013
    422410 5wsc:A (2.4) BS01 AMP 2.7.1.40 GO:0000287 ... P9WKE5 29215013
    422411 5wsc:A (2.4) BS02 G6P 2.7.1.40 GO:0000287 ... P9WKE5 29215013
    422412 5wsc:A (2.4) BS03 MG 2.7.1.40 GO:0000287 ... P9WKE5 29215013
    422413 5wsc:A (2.4) BS04 OXL 2.7.1.40 GO:0000287 ... P9WKE5 29215013
    422414 5wsc:B (2.4) BS01 AMP 2.7.1.40 GO:0000287 ... P9WKE5 29215013
    422415 5wsc:B (2.4) BS02 G6P 2.7.1.40 GO:0000287 ... P9WKE5 29215013
    422416 5wsc:B (2.4) BS03 MG 2.7.1.40 GO:0000287 ... P9WKE5 29215013
    422417 5wsc:B (2.4) BS04 OXL 2.7.1.40 GO:0000287 ... P9WKE5 29215013
    422418 5wsc:C (2.4) BS01 AMP 2.7.1.40 GO:0000287 ... P9WKE5 29215013
    422419 5wsc:C (2.4) BS02 G6P 2.7.1.40 GO:0000287 ... P9WKE5 29215013
    422420 5wsc:C (2.4) BS03 MG 2.7.1.40 GO:0000287 ... P9WKE5 29215013
    422421 5wsc:C (2.4) BS04 OXL 2.7.1.40 GO:0000287 ... P9WKE5 29215013
    422422 5wsc:C (2.4) BS05 PO4 2.7.1.40 GO:0000287 ... P9WKE5 29215013
    422423 5wsc:D (2.4) BS01 AMP 2.7.1.40 GO:0000287 ... P9WKE5 29215013
    422424 5wsc:D (2.4) BS02 G6P 2.7.1.40 GO:0000287 ... P9WKE5 29215013
    422425 5wsc:D (2.4) BS03 MG 2.7.1.40 GO:0000287 ... P9WKE5 29215013
    422426 5wsc:D (2.4) BS04 OXL 2.7.1.40 GO:0000287 ... P9WKE5 29215013
    422427 5wse:A (1.12) BS01 OS ? GO:0046872 ... Q9X1H0 28340294
    422428 5wse:B (1.12) BS01 OS ? GO:0046872 ... Q9X1H0 28340294
    422429 5wse:C (1.12) BS01 OS ? GO:0046872 ... Q9X1H0 28340294
    422430 5wse:D (1.12) BS01 OS ? GO:0046872 ... Q9X1H0 28340294
    422431 5wsf:A (1.11) BS01 OS ? GO:0046872 ... Q9X1H0 28340294
    422432 5wsf:B (1.11) BS01 OS ? GO:0046872 ... Q9X1H0 28340294
    422433 5wsf:C (1.11) BS01 OS ? GO:0046872 ... Q9X1H0 28340294
    422434 5wsf:D (1.11) BS01 OS ? GO:0046872 ... Q9X1H0 28340294
    422435 5wsg:A (4.0) BS01 peptide ? GO:0000244 ... P33334 27980089
    422436 5wsg:A (4.0) BS02 rna ? GO:0000244 ... P33334 27980089
    422437 5wsg:A (4.0) BS03 rna ? GO:0000244 ... P33334 27980089
    422438 5wsg:A (4.0) BS04 rna ? GO:0000244 ... P33334 27980089
    422439 5wsg:A (4.0) BS05 rna ? GO:0000244 ... P33334 27980089
    422440 5wsg:A (4.0) BS06 rna ? GO:0000244 ... P33334 27980089
    422441 5wsg:A (4.0) BS07 rna ? GO:0000244 ... P33334 27980089
    422442 5wsg:C (4.0) BS01 rna ? GO:0000244 ... P36048 27980089
    422443 5wsg:C (4.0) BS02 GTP ? GO:0000244 ... P36048 27980089
    422444 5wsg:C (4.0) BS03 MG ? GO:0000244 ... P36048 27980089
    422445 5wsg:F (4.0) BS01 rna ? GO:0000243 ... P40018 27980089
    422446 5wsg:G (4.0) BS01 rna ? GO:0000243 ... Q12330 27980089
    422447 5wsg:H (4.0) BS01 rna ? GO:0000243 ... P54999 27980089
    422448 5wsg:I (4.0) BS01 rna ? GO:0000384 ... P53277 27980089
    422449 5wsg:I (4.0) BS02 rna ? GO:0000384 ... P53277 27980089
    422450 5wsg:K (4.0) BS01 rna ? GO:0000243 ... P40204 27980089
    422451 5wsg:P (4.0) BS01 rna ? GO:0000350 ... P28004 27980089
    422452 5wsg:P (4.0) BS02 rna ? GO:0000350 ... P28004 27980089
    422453 5wsg:P (4.0) BS03 rna ? GO:0000350 ... P28004 27980089
    422454 5wsg:Q (4.0) BS01 rna ? GO:0000398 ... P38241 27980089
    422455 5wsg:Q (4.0) BS02 ZN ? GO:0000398 ... P38241 27980089
    422456 5wsg:Q (4.0) BS03 ZN ? GO:0000398 ... P38241 27980089
    422457 5wsg:R (4.0) BS01 rna ? GO:0000387 ... Q12046 27980089
    422458 5wsg:R (4.0) BS02 rna ? GO:0000387 ... Q12046 27980089
    422459 5wsg:R (4.0) BS03 ZN ? GO:0000387 ... Q12046 27980089
    422460 5wsg:S (4.0) BS01 rna ? GO:0000398 ... Q03772 27980089
    422461 5wsg:S (4.0) BS02 rna ? GO:0000398 ... Q03772 27980089
    422462 5wsg:S (4.0) BS03 rna ? GO:0000398 ... Q03772 27980089
    422463 5wsg:T (4.0) BS01 rna ? GO:0000282 ... P25337 27980089
    422464 5wsg:T (4.0) BS02 rna ? GO:0000282 ... P25337 27980089
    422465 5wsg:T (4.0) BS03 ZN ? GO:0000282 ... P25337 27980089
    422466 5wsg:T (4.0) BS04 ZN ? GO:0000282 ... P25337 27980089
    422467 5wsg:T (4.0) BS05 ZN ? GO:0000282 ... P25337 27980089
    422468 5wsg:U (4.0) BS01 rna ? GO:0000243 ... P43321 27980089
    422469 5wsg:V (4.0) BS01 rna ? GO:0000243 ... Q02260 27980089
    422470 5wsg:W (4.0) BS01 rna ? GO:0000243 ... Q06217 27980089
    422471 5wsg:X (4.0) BS01 rna ? GO:0000398 ... P40567 27980089
    422472 5wsg:Z (4.0) BS01 peptide ? GO:0000398 ... P53333 27980089
    422473 5wsg:c (4.0) BS01 rna ? GO:0000350 ... Q03654 27980089
    422474 5wsg:c (4.0) BS02 rna ? GO:0000350 ... Q03654 27980089
    422475 5wsg:d (4.0) BS01 rna ? GO:0000398 ... Q12309 27980089
    422476 5wsg:g (4.0) BS01 rna ? GO:0000243 ... Q06217 27980089
    422477 5wsg:h (4.0) BS01 rna ? GO:0000243 ... P54999 27980089
    422478 5wsg:i (4.0) BS01 rna ? GO:0000243 ... Q12330 27980089
    422479 5wsg:j (4.0) BS01 rna ? GO:0000243 ... P40204 27980089
    422480 5wsg:k (4.0) BS01 rna ? GO:0000243 ... P40018 27980089
    422481 5wsg:l (4.0) BS01 rna ? GO:0000243 ... P43321 27980089
    422482 5wsg:m (4.0) BS01 rna ? GO:0000243 ... Q02260 27980089
    422483 5wsg:n (4.0) BS01 rna ? GO:0000348 ... P40968 27980089
    422484 5wsg:n (4.0) BS02 rna ? GO:0000348 ... P40968 27980089
    422485 5wsg:n (4.0) BS03 rna ? GO:0000348 ... P40968 27980089
    422486 5wsh:A (2.0) BS01 peptide ? N/A P04439 29950410
    422487 5wsk:A (1.781) BS01 MG 4.1.1.39 GO:0000287 ... P11383 N/A
    422488 5wsk:B (1.781) BS01 MG 4.1.1.39 GO:0000287 ... P11383 N/A
    422489 5wsk:C (1.781) BS01 MG 4.1.1.39 GO:0000287 ... P11383 N/A
    422490 5wsk:D (1.781) BS01 MG 4.1.1.39 GO:0000287 ... P11383 N/A
    422491 5wsl:A (1.5) BS01 CA ? GO:0004252 ... A0A2H4A2Y5 28680127
    422492 5wsl:A (1.5) BS02 CA ? GO:0004252 ... A0A2H4A2Y5 28680127
    422493 5wsl:B (1.5) BS01 CA ? GO:0004252 ... A0A2H4A2Y5 28680127
    422494 5wsl:B (1.5) BS02 CA ? GO:0004252 ... A0A2H4A2Y5 28680127
    422495 5wsl:C (1.5) BS01 CA ? GO:0004252 ... A0A2H4A2Y5 28680127
    422496 5wsl:C (1.5) BS02 CA ? GO:0004252 ... A0A2H4A2Y5 28680127
    422497 5wsv:A (2.33) BS01 peptide ? GO:0000086 ... P0DP23 28262393
    422498 5wsv:A (2.33) BS02 peptide ? GO:0000086 ... P0DP23 28262393
    422499 5wsv:A (2.33) BS03 CA ? GO:0000086 ... P0DP23 28262393
    422500 5wsv:A (2.33) BS04 CA ? GO:0000086 ... P0DP23 28262393
    422501 5wsv:A (2.33) BS05 CA ? GO:0000086 ... P0DP23 28262393
    422502 5wsv:A (2.33) BS06 CA ? GO:0000086 ... P0DP23 28262393
    422503 5wsv:C (2.33) BS01 peptide ? GO:0000086 ... P0DP23 28262393
    422504 5wsv:C (2.33) BS02 peptide ? GO:0000086 ... P0DP23 28262393
    422505 5wsv:C (2.33) BS03 CA ? GO:0000086 ... P0DP23 28262393
    422506 5wsv:C (2.33) BS04 CA ? GO:0000086 ... P0DP23 28262393
    422507 5wsv:C (2.33) BS05 CA ? GO:0000086 ... P0DP23 28262393
    422508 5wsv:C (2.33) BS06 CA ? GO:0000086 ... P0DP23 28262393
    422509 5wsy:A (2.0) BS01 7UC 4.3.2.11 GO:0006631 ... Q79ZR9 28522606
    422510 5wsy:A (2.0) BS02 7UC 4.3.2.11 GO:0006631 ... Q79ZR9 28522606
    422511 5wsy:B (2.0) BS01 7UC 4.3.2.11 GO:0006631 ... Q79ZR9 28522606
    422512 5wsy:B (2.0) BS02 7UC 4.3.2.11 GO:0006631 ... Q79ZR9 28522606
    422513 5wsz:A (2.565) BS01 CU ? N/A A0A0C5K362 N/A
    422514 5wsz:B (2.565) BS01 CU ? N/A A0A0C5K362 N/A
    422515 5wsz:C (2.565) BS01 CU ? N/A A0A0C5K362 N/A
    422516 5wsz:D (2.565) BS01 CU ? N/A A0A0C5K362 N/A
    422517 5wt1:A (2.598) BS01 rna 2.1.1.-
    2.1.1.228
    GO:0002939 ... Q9V2G1 29214216
    422518 5wt1:A (2.598) BS02 SAH 2.1.1.-
    2.1.1.228
    GO:0002939 ... Q9V2G1 29214216
    422519 5wt1:B (2.598) BS01 rna 2.1.1.-
    2.1.1.228
    GO:0002939 ... Q9V2G1 29214216
    422520 5wt1:B (2.598) BS02 SAH 2.1.1.-
    2.1.1.228
    GO:0002939 ... Q9V2G1 29214216
    422521 5wt2:A (2.301) BS01 PLP 2.8.1.7 GO:0005515 ... O25008 31587510
    422522 5wt3:A (3.204) BS01 rna 2.1.1.-
    2.1.1.228
    GO:0002939 ... Q9V2G1 29214216
    422523 5wt3:A (3.204) BS02 MTA 2.1.1.-
    2.1.1.228
    GO:0002939 ... Q9V2G1 29214216
    422524 5wt4:A (2.92) BS01 C6P 2.8.1.7 GO:0005515 ... O25008 31587510
    422525 5wt6:A (3.3) BS01 PDA 2.8.1.7 GO:0005515 ... O25008 N/A
    422526 5wt9:G (2.401) BS01 FUC ? GO:0016020 ... Q15116 28165004
    422527 5wtb:A (3.3) BS01 peptide ? GO:0005618 ... Q932F7 28258151
    422528 5wtb:B (3.3) BS01 peptide ? GO:0005618 ... Q932F7 28258151
    422529 5wtb:C (3.3) BS01 peptide ? GO:0005618 ... Q932F7 28258151
    422530 5wtb:D (3.3) BS01 peptide ? GO:0005618 ... Q932F7 28258151
    422531 5wtc:A (2.2) BS01 7UL 2.4.2.-
    2.4.2.30
    GO:0003950 ... P09874 N/A
    422532 5wtc:B (2.2) BS01 7UL 2.4.2.-
    2.4.2.30
    GO:0003950 ... P09874 N/A
    422533 5wtd:A (2.501) BS01 FE ? GO:0005515 ... P02787 35690040
    422534 5wtd:A (2.501) BS02 RU ? GO:0005515 ... P02787 35690040
    422535 5wti:Z (2.682) BS01 dna N/A N/A N/A 28374750
    422536 5wti:Z (2.682) BS02 dna N/A N/A N/A 28374750
    422537 5wti:Z (2.682) BS03 rna N/A N/A N/A 28374750
    422538 5wti:Z (2.682) BS04 MG N/A N/A N/A 28374750
    422539 5wti:Z (2.682) BS05 MG N/A N/A N/A 28374750
    422540 5wtk:A (2.651) BS01 rna 3.1.-.- GO:0003723 ... P0DOC6 28086085
    422541 5wtl:A (2.298) BS01 CA ? GO:0005509 ... N/A 28807152
    422542 5wtl:A (2.298) BS02 CA ? GO:0005509 ... N/A 28807152
    422543 5wtl:A (2.298) BS03 CA ? GO:0005509 ... N/A 28807152
    422544 5wtl:A (2.298) BS04 CA ? GO:0005509 ... N/A 28807152
    422545 5wtl:A (2.298) BS05 CA ? GO:0005509 ... N/A 28807152
    422546 5wtl:A (2.298) BS06 CA ? GO:0005509 ... N/A 28807152
    422547 5wtl:A (2.298) BS07 CA ? GO:0005509 ... N/A 28807152
    422548 5wtl:A (2.298) BS08 CA ? GO:0005509 ... N/A 28807152
    422549 5wtl:A (2.298) BS09 CA ? GO:0005509 ... N/A 28807152
    422550 5wtl:A (2.298) BS10 CA ? GO:0005509 ... N/A 28807152
    422551 5wtl:A (2.298) BS11 CA ? GO:0005509 ... N/A 28807152
    422552 5wtl:B (2.298) BS01 CA ? GO:0005509 ... N/A 28807152
    422553 5wtl:B (2.298) BS02 CA ? GO:0005509 ... N/A 28807152
    422554 5wtl:B (2.298) BS03 CA ? GO:0005509 ... N/A 28807152
    422555 5wtl:B (2.298) BS04 CA ? GO:0005509 ... N/A 28807152
    422556 5wtl:B (2.298) BS05 CA ? GO:0005509 ... N/A 28807152
    422557 5wtl:B (2.298) BS06 CA ? GO:0005509 ... N/A 28807152
    422558 5wtl:B (2.298) BS07 CA ? GO:0005509 ... N/A 28807152
    422559 5wtl:B (2.298) BS08 CA ? GO:0005509 ... N/A 28807152
    422560 5wtl:B (2.298) BS09 CA ? GO:0005509 ... N/A 28807152
    422561 5wtl:B (2.298) BS10 CA ? GO:0005509 ... N/A 28807152
    422562 5wtl:B (2.298) BS11 CA ? GO:0005509 ... N/A 28807152
    422563 5wtl:C (2.298) BS01 CA ? GO:0005509 ... N/A 28807152
    422564 5wtl:C (2.298) BS02 CA ? GO:0005509 ... N/A 28807152
    422565 5wtl:C (2.298) BS03 CA ? GO:0005509 ... N/A 28807152
    422566 5wtl:C (2.298) BS04 CA ? GO:0005509 ... N/A 28807152
    422567 5wtl:C (2.298) BS05 CA ? GO:0005509 ... N/A 28807152
    422568 5wtl:C (2.298) BS06 CA ? GO:0005509 ... N/A 28807152
    422569 5wtl:C (2.298) BS07 CA ? GO:0005509 ... N/A 28807152
    422570 5wtl:C (2.298) BS08 CA ? GO:0005509 ... N/A 28807152
    422571 5wtl:C (2.298) BS09 CA ? GO:0005509 ... N/A 28807152
    422572 5wtl:C (2.298) BS10 CA ? GO:0005509 ... N/A 28807152
    422573 5wtl:C (2.298) BS11 CA ? GO:0005509 ... N/A 28807152
    422574 5wtl:D (2.298) BS01 CA ? GO:0005509 ... N/A 28807152
    422575 5wtl:D (2.298) BS02 CA ? GO:0005509 ... N/A 28807152
    422576 5wtl:D (2.298) BS03 CA ? GO:0005509 ... N/A 28807152
    422577 5wtl:D (2.298) BS04 CA ? GO:0005509 ... N/A 28807152
    422578 5wtl:D (2.298) BS05 CA ? GO:0005509 ... N/A 28807152
    422579 5wtl:D (2.298) BS06 CA ? GO:0005509 ... N/A 28807152
    422580 5wtl:D (2.298) BS07 CA ? GO:0005509 ... N/A 28807152
    422581 5wtl:D (2.298) BS08 CA ? GO:0005509 ... N/A 28807152
    422582 5wtl:D (2.298) BS09 CA ? GO:0005509 ... N/A 28807152
    422583 5wtl:D (2.298) BS10 CA ? GO:0005509 ... N/A 28807152
    422584 5wtt:A (2.7) BS01 peptide N/A N/A N/A 28608634
    422585 5wtt:B (2.7) BS01 peptide N/A N/A N/A 28608634
    422586 5wtt:B (2.7) BS02 peptide N/A N/A N/A 28608634
    422587 5wtt:H (2.7) BS01 peptide N/A N/A N/A 28608634
    422588 5wtt:L (2.7) BS01 peptide N/A N/A N/A 28608634
    422589 5wty:A (2.785) BS01 rna ? GO:0003723 ... P47077 28053123
    422590 5wty:B (2.785) BS01 rna ? GO:0003723 ... P47077 28053123
    422591 5wtz:A (1.803) BS01 NAD ? GO:0000166 ... X5I2D7 28199340
    422592 5wu0:A (2.251) BS01 NAI ? GO:0000166 ... X5I2D7 28199340
    422593 5wu2:A (2.95) BS01 UTP 2.7.7.19
    2.7.7.52
    N/A Q9H6E5 28589955
    422594 5wu2:B (2.95) BS01 UTP 2.7.7.19
    2.7.7.52
    N/A Q9H6E5 28589955
    422595 5wu3:A (2.703) BS01 UTP 2.7.7.19
    2.7.7.52
    N/A Q9H6E5 28589955
    422596 5wu3:B (2.703) BS01 UTP 2.7.7.19
    2.7.7.52
    N/A Q9H6E5 28589955
    422597 5wu4:A (2.8) BS01 ATP 2.7.7.19
    2.7.7.52
    N/A Q9H6E5 28589955
    422598 5wu4:A (2.8) BS02 MG 2.7.7.19
    2.7.7.52
    N/A Q9H6E5 28589955
    422599 5wu4:B (2.8) BS01 ATP 2.7.7.19
    2.7.7.52
    N/A Q9H6E5 28589955
    422600 5wu4:B (2.8) BS02 MG 2.7.7.19
    2.7.7.52
    N/A Q9H6E5 28589955

    Reference:
  • Chengxin Zhang, Xi Zhang, Lydia Freddolino, and Yang Zhang. BioLiP2: an updated structure database for biologically relevent ligand-protein interactions, Nucleic Acids Research, gkad630 (2023).
  • Jianyi Yang, Ambrish Roy, and Yang Zhang. BioLiP: a semi-manually curated database for biologically relevant ligand-protein interactions, Nucleic Acids Research, 41: D1096-D1103 (2013) (download the PDF file).