SEQ2FUN

BioLiP
Download all results in tab-seperated text for 942758 receptor-ligand interactions, whose format is explained at readme.txt.
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    # PDB
    (Resolution Å)
    Site # Ligand EC number GO terms UniProt PubMed Binding
    affinity
    423001 5wzi:A (2.75) BS01 rna ? GO:0003723 ... Q9C552 29036323
    423002 5wzj:A (2.101) BS01 rna ? GO:0003723 ... Q9C552 29036323
    423003 5wzk:A (2.8) BS01 rna ? GO:0003723 ... Q9C552 29036323
    423004 5wzm:A (2.0) BS01 CA 3.1.1.4 GO:0004623 ... Q9NZK7 28883454
    423005 5wzm:A (2.0) BS02 CA 3.1.1.4 GO:0004623 ... Q9NZK7 28883454
    423006 5wzn:A (2.1) BS01 ZN 3.2.1.- GO:0016798 ... G5ELM1 28546425
    423007 5wzn:A (2.1) BS02 CA 3.2.1.- GO:0016798 ... G5ELM1 28546425
    423008 5wzn:B (2.1) BS01 ZN 3.2.1.- GO:0016798 ... G5ELM1 28546425
    423009 5wzn:B (2.1) BS02 CA 3.2.1.- GO:0016798 ... G5ELM1 28546425
    423010 5wzo:A (1.9) BS01 CA 3.1.1.4 GO:0004623 ... Q9NZK7 28883454
    423011 5wzo:A (1.9) BS02 CA 3.1.1.4 GO:0004623 ... Q9NZK7 28883454
    423012 5wzp:A (2.64) BS01 ZN 3.2.1.- GO:0016798 ... G5ELM1 28546425
    423013 5wzp:A (2.64) BS02 CA 3.2.1.- GO:0016798 ... G5ELM1 28546425
    423014 5wzp:B (2.64) BS01 ZN 3.2.1.- GO:0016798 ... G5ELM1 28546425
    423015 5wzp:B (2.64) BS02 CA 3.2.1.- GO:0016798 ... G5ELM1 28546425
    423016 5wzq:A (1.9) BS01 ZN 3.2.1.- GO:0016798 ... G5ELM1 28546425
    423017 5wzq:B (1.9) BS01 ZN 3.2.1.- GO:0016798 ... G5ELM1 28546425
    423018 5wzr:A (2.79) BS01 ZN 3.2.1.- GO:0016798 ... G5ELM1 28546425
    423019 5wzr:A (2.79) BS02 DJN 3.2.1.- GO:0016798 ... G5ELM1 28546425
    423020 5wzr:A (2.79) BS03 CA 3.2.1.- GO:0016798 ... G5ELM1 28546425
    423021 5wzr:B (2.79) BS01 ZN 3.2.1.- GO:0016798 ... G5ELM1 28546425
    423022 5wzr:B (2.79) BS02 DJN 3.2.1.- GO:0016798 ... G5ELM1 28546425
    423023 5wzr:B (2.79) BS03 CA 3.2.1.- GO:0016798 ... G5ELM1 28546425
    423024 5wzs:A (2.3) BS01 7W9 3.1.1.4 GO:0004623 ... Q9NZK7 28883454 MOAD: ic50=0.28uM
    423025 5wzs:A (2.3) BS02 CA 3.1.1.4 GO:0004623 ... Q9NZK7 28883454
    423026 5wzt:A (2.4) BS01 CA 3.1.1.4 GO:0004623 ... Q9NZK7 28883454
    423027 5wzt:A (2.4) BS02 7W6 3.1.1.4 GO:0004623 ... Q9NZK7 28883454 MOAD: ic50=0.22uM
    423028 5wzu:A (2.2) BS01 CA 3.1.1.4 GO:0004623 ... Q9NZK7 28883454
    423029 5wzu:A (2.2) BS02 7W3 3.1.1.4 GO:0004623 ... Q9NZK7 28883454 MOAD: ic50=0.1uM
    423030 5wzv:A (2.2) BS01 CA 3.1.1.4 GO:0004623 ... Q9NZK7 28883454
    423031 5wzv:A (2.2) BS02 7W0 3.1.1.4 GO:0004623 ... Q9NZK7 28883454 MOAD: ic50=0.21uM
    423032 5wzw:A (1.95) BS01 CA 3.1.1.4 GO:0004623 ... Q9NZK7 28883454
    423033 5wzw:A (1.95) BS02 U8D 3.1.1.4 GO:0004623 ... Q9NZK7 28883454 MOAD: ic50=1.23uM
    423034 5wzx:A (2.95) BS01 peptide ? GO:0003677 ... Q96RI1 29162643
    423035 5wzx:A (2.95) BS02 7VX ? GO:0003677 ... Q96RI1 29162643
    423036 5wzx:A (2.95) BS03 BU3 ? GO:0003677 ... Q96RI1 29162643
    423037 5wzx:B (2.95) BS01 peptide ? GO:0003677 ... Q96RI1 29162643
    423038 5wzx:B (2.95) BS02 7VX ? GO:0003677 ... Q96RI1 29162643
    423039 5wzy:A (2.799) BS01 MAN ? GO:0001614 ... F8W463 28332633
    423040 5wzy:A (2.799) BS02 CTP ? GO:0001614 ... F8W463 28332633
    423041 5wzz:A (2.103) BS01 peptide 2.3.2.27 GO:0005737 ... Q8IUQ4 28546513
    423042 5wzz:A (2.103) BS02 ZN 2.3.2.27 GO:0005737 ... Q8IUQ4 28546513
    423043 5wzz:A (2.103) BS03 ZN 2.3.2.27 GO:0005737 ... Q8IUQ4 28546513
    423044 5wzz:B (2.103) BS01 peptide 2.3.2.27 GO:0005737 ... Q8IUQ4 28546513
    423045 5wzz:B (2.103) BS02 ZN 2.3.2.27 GO:0005737 ... Q8IUQ4 28546513
    423046 5wzz:B (2.103) BS03 ZN 2.3.2.27 GO:0005737 ... Q8IUQ4 28546513
    423047 5wzz:C (2.103) BS01 peptide 2.3.2.27 GO:0005737 ... Q8IUQ4 28546513
    423048 5wzz:C (2.103) BS02 ZN 2.3.2.27 GO:0005737 ... Q8IUQ4 28546513
    423049 5wzz:C (2.103) BS03 ZN 2.3.2.27 GO:0005737 ... Q8IUQ4 28546513
    423050 5wzz:D (2.103) BS01 peptide 2.3.2.27 GO:0005737 ... Q8IUQ4 28546513
    423051 5wzz:D (2.103) BS02 ZN 2.3.2.27 GO:0005737 ... Q8IUQ4 28546513
    423052 5wzz:D (2.103) BS03 ZN 2.3.2.27 GO:0005737 ... Q8IUQ4 28546513
    423053 5x02:A (2.401) BS01 F6M 2.7.10.1 GO:0004672 ... P36888 29187377
    423054 5x03:A (2.0) BS01 PLP ? GO:0009058 ... P94426 28412355
    423055 5x03:A (2.0) BS02 ABU ? GO:0009058 ... P94426 28412355
    423056 5x03:B (2.0) BS01 PLP ? GO:0009058 ... P94426 28412355
    423057 5x06:E (3.237) BS01 ADP ? GO:0000166 ... P69931 N/A
    423058 5x06:F (3.237) BS01 ADP ? GO:0000166 ... P69931 N/A
    423059 5x06:G (3.237) BS01 ADP ? GO:0000166 ... P69931 N/A
    423060 5x06:H (3.237) BS01 ADP ? GO:0000166 ... P69931 N/A
    423061 5x07:C (2.796) BS01 dna ? GO:0003700 ... Q9Y261 28644006
    423062 5x07:C (2.796) BS02 dna ? GO:0003700 ... Q9Y261 28644006
    423063 5x07:C (2.796) BS03 dna ? GO:0003700 ... Q9Y261 28644006
    423064 5x07:C (2.796) BS04 dna ? GO:0003700 ... Q9Y261 28644006
    423065 5x07:F (2.796) BS01 dna ? GO:0003700 ... Q9Y261 28644006
    423066 5x07:F (2.796) BS02 dna ? GO:0003700 ... Q9Y261 28644006
    423067 5x07:F (2.796) BS03 dna ? GO:0003700 ... Q9Y261 28644006
    423068 5x07:F (2.796) BS04 dna ? GO:0003700 ... Q9Y261 28644006
    423069 5x07:I (2.796) BS01 dna ? GO:0003700 ... Q9Y261 28644006
    423070 5x07:I (2.796) BS02 dna ? GO:0003700 ... Q9Y261 28644006
    423071 5x07:I (2.796) BS03 dna ? GO:0003700 ... Q9Y261 28644006
    423072 5x07:L (2.796) BS01 dna ? GO:0003700 ... Q9Y261 28644006
    423073 5x07:L (2.796) BS02 dna ? GO:0003700 ... Q9Y261 28644006
    423074 5x07:L (2.796) BS03 dna ? GO:0003700 ... Q9Y261 28644006
    423075 5x07:L (2.796) BS04 dna ? GO:0003700 ... Q9Y261 28644006
    423076 5x08:H (1.49) BS01 peptide N/A N/A N/A 28300601
    423077 5x08:L (1.49) BS01 peptide N/A N/A N/A 28300601
    423078 5x0b:A (1.75) BS01 AMP 2.7.1.226 GO:0005524 ... Q5JD03 28358477
    423079 5x0e:A (2.0) BS01 AMP 2.7.1.226 GO:0005524 ... Q5JD03 28358477
    423080 5x0e:A (2.0) BS02 SEP 2.7.1.226 GO:0005524 ... Q5JD03 28358477
    423081 5x0f:A (1.76) BS01 AMP 2.7.1.226 GO:0005524 ... Q5JD03 28358477
    423082 5x0g:A (1.9) BS01 AMP 2.7.1.226 GO:0005524 ... Q5JD03 28358477
    423083 5x0g:A (1.9) BS02 ADP 2.7.1.226 GO:0005524 ... Q5JD03 28358477
    423084 5x0g:A (1.9) BS03 7WF 2.7.1.226 GO:0005524 ... Q5JD03 28358477
    423085 5x0i:A (2.64) BS01 FBP 2.7.10.2
    2.7.11.1
    2.7.1.40
    GO:0000287 ... P14618 30911680
    423086 5x0i:A (2.64) BS02 SER 2.7.10.2
    2.7.11.1
    2.7.1.40
    GO:0000287 ... P14618 30911680
    423087 5x0i:A (2.64) BS03 PYR 2.7.10.2
    2.7.11.1
    2.7.1.40
    GO:0000287 ... P14618 30911680
    423088 5x0i:A (2.64) BS04 MG 2.7.10.2
    2.7.11.1
    2.7.1.40
    GO:0000287 ... P14618 30911680
    423089 5x0i:B (2.64) BS01 FBP 2.7.10.2
    2.7.11.1
    2.7.1.40
    GO:0000287 ... P14618 30911680
    423090 5x0i:B (2.64) BS02 SER 2.7.10.2
    2.7.11.1
    2.7.1.40
    GO:0000287 ... P14618 30911680
    423091 5x0i:B (2.64) BS03 PYR 2.7.10.2
    2.7.11.1
    2.7.1.40
    GO:0000287 ... P14618 30911680
    423092 5x0i:B (2.64) BS04 MG 2.7.10.2
    2.7.11.1
    2.7.1.40
    GO:0000287 ... P14618 30911680
    423093 5x0i:C (2.64) BS01 FBP 2.7.10.2
    2.7.11.1
    2.7.1.40
    GO:0000287 ... P14618 30911680
    423094 5x0i:C (2.64) BS02 SER 2.7.10.2
    2.7.11.1
    2.7.1.40
    GO:0000287 ... P14618 30911680
    423095 5x0i:C (2.64) BS03 PYR 2.7.10.2
    2.7.11.1
    2.7.1.40
    GO:0000287 ... P14618 30911680
    423096 5x0i:C (2.64) BS04 MG 2.7.10.2
    2.7.11.1
    2.7.1.40
    GO:0000287 ... P14618 30911680
    423097 5x0i:D (2.64) BS01 FBP 2.7.10.2
    2.7.11.1
    2.7.1.40
    GO:0000287 ... P14618 30911680
    423098 5x0i:D (2.64) BS02 SER 2.7.10.2
    2.7.11.1
    2.7.1.40
    GO:0000287 ... P14618 30911680
    423099 5x0i:D (2.64) BS03 PYR 2.7.10.2
    2.7.11.1
    2.7.1.40
    GO:0000287 ... P14618 30911680
    423100 5x0i:D (2.64) BS04 MG 2.7.10.2
    2.7.11.1
    2.7.1.40
    GO:0000287 ... P14618 30911680
    423101 5x0j:A (1.43) BS01 AMP 2.7.1.226 GO:0005524 ... Q5JD03 28358477
    423102 5x0j:A (1.43) BS02 SEP 2.7.1.226 GO:0005524 ... Q5JD03 28358477
    423103 5x0k:A (1.65) BS01 AMP 2.7.1.226 GO:0005524 ... Q5JD03 28358477
    423104 5x0r:A (2.665) BS01 peptide ? GO:0003677 ... O75469 28963450
    423105 5x0r:A (2.665) BS02 4WH ? GO:0003677 ... O75469 28963450 BindingDB: IC50=340nM, EC50=880nM
    423106 5x0r:B (2.665) BS01 peptide ? GO:0003677 ... O75469 28963450
    423107 5x0r:B (2.665) BS02 4WH ? GO:0003677 ... O75469 28963450 BindingDB: IC50=340nM, EC50=880nM
    423108 5x0x:A (3.97) BS01 dna ? GO:0000786 ... P84233 28424519
    423109 5x0x:A (3.97) BS02 dna ? GO:0000786 ... P84233 28424519
    423110 5x0x:B (3.97) BS01 dna ? GO:0000786 ... P62799 28424519
    423111 5x0x:B (3.97) BS02 dna ? GO:0000786 ... P62799 28424519
    423112 5x0x:C (3.97) BS01 dna ? GO:0000786 ... P06897 28424519
    423113 5x0x:C (3.97) BS02 dna ? GO:0000786 ... P06897 28424519
    423114 5x0x:D (3.97) BS01 dna ? GO:0000786 ... P02281 28424519
    423115 5x0x:D (3.97) BS02 dna ? GO:0000786 ... P02281 28424519
    423116 5x0x:E (3.97) BS01 dna ? GO:0000786 ... P84233 28424519
    423117 5x0x:E (3.97) BS02 dna ? GO:0000786 ... P84233 28424519
    423118 5x0x:F (3.97) BS01 dna ? GO:0000786 ... P62799 28424519
    423119 5x0x:F (3.97) BS02 dna ? GO:0000786 ... P62799 28424519
    423120 5x0x:G (3.97) BS01 dna ? GO:0000786 ... P06897 28424519
    423121 5x0x:G (3.97) BS02 dna ? GO:0000786 ... P06897 28424519
    423122 5x0x:H (3.97) BS01 dna ? GO:0000786 ... P02281 28424519
    423123 5x0x:H (3.97) BS02 dna ? GO:0000786 ... P02281 28424519
    423124 5x0x:O (3.97) BS01 dna 3.6.4.- GO:0005524 ... P22082 28424519
    423125 5x0x:O (3.97) BS02 dna 3.6.4.- GO:0005524 ... P22082 28424519
    423126 5x0y:A (4.69) BS01 dna ? GO:0000786 ... P84233 28424519
    423127 5x0y:A (4.69) BS02 dna ? GO:0000786 ... P84233 28424519
    423128 5x0y:B (4.69) BS01 dna ? GO:0000786 ... P62799 28424519
    423129 5x0y:B (4.69) BS02 dna ? GO:0000786 ... P62799 28424519
    423130 5x0y:C (4.69) BS01 dna ? GO:0000786 ... P06897 28424519
    423131 5x0y:C (4.69) BS02 dna ? GO:0000786 ... P06897 28424519
    423132 5x0y:D (4.69) BS01 dna ? GO:0000786 ... P02281 28424519
    423133 5x0y:D (4.69) BS02 dna ? GO:0000786 ... P02281 28424519
    423134 5x0y:E (4.69) BS01 dna ? GO:0000786 ... P84233 28424519
    423135 5x0y:E (4.69) BS02 dna ? GO:0000786 ... P84233 28424519
    423136 5x0y:F (4.69) BS01 dna ? GO:0000786 ... P62799 28424519
    423137 5x0y:F (4.69) BS02 dna ? GO:0000786 ... P62799 28424519
    423138 5x0y:G (4.69) BS01 dna ? GO:0000786 ... P06897 28424519
    423139 5x0y:G (4.69) BS02 dna ? GO:0000786 ... P06897 28424519
    423140 5x0y:H (4.69) BS01 dna ? GO:0000786 ... P02281 28424519
    423141 5x0y:H (4.69) BS02 dna ? GO:0000786 ... P02281 28424519
    423142 5x0y:O (4.69) BS01 dna 3.6.4.- GO:0005524 ... P22082 28424519
    423143 5x0y:O (4.69) BS02 dna 3.6.4.- GO:0005524 ... P22082 28424519
    423144 5x11:A (2.65) BS01 dna ? N/A E0TW95 29136175
    423145 5x11:A (2.65) BS02 dna ? N/A E0TW95 29136175
    423146 5x11:B (2.65) BS01 dna ? N/A E0TW95 29136175
    423147 5x11:B (2.65) BS02 dna ? N/A E0TW95 29136175
    423148 5x11:C (2.65) BS01 dna ? N/A E0TW95 29136175
    423149 5x11:C (2.65) BS02 dna ? N/A E0TW95 29136175
    423150 5x11:D (2.65) BS01 dna ? N/A E0TW95 29136175
    423151 5x11:D (2.65) BS02 dna ? N/A E0TW95 29136175
    423152 5x11:E (2.65) BS01 dna ? N/A E0TW95 29136175
    423153 5x11:E (2.65) BS02 dna ? N/A E0TW95 29136175
    423154 5x11:F (2.65) BS01 dna ? N/A E0TW95 29136175
    423155 5x11:F (2.65) BS02 dna ? N/A E0TW95 29136175
    423156 5x11:H (2.65) BS01 dna ? N/A E0TW95 29136175
    423157 5x11:H (2.65) BS02 dna ? N/A E0TW95 29136175
    423158 5x14:A (1.68) BS01 FER ? N/A E0TW95 29136175
    423159 5x16:A (1.97) BS01 AR6 2.3.1.-
    2.3.1.286
    2.4.2.-
    GO:0070403 ... Q8N6T7 N/A
    423160 5x16:A (1.97) BS02 ZN 2.3.1.-
    2.3.1.286
    2.4.2.-
    GO:0070403 ... Q8N6T7 N/A
    423161 5x17:A (2.0) BS01 ADP 2.7.11.1
    2.7.11.26
    GO:0004672 ... Q9DC28 28886336
    423162 5x17:B (2.0) BS01 ADP 2.7.11.1
    2.7.11.26
    GO:0004672 ... Q9DC28 28886336
    423163 5x19:A (2.2) BS01 HEA 7.1.1.9 GO:0004129 ... P00396 28740863
    423164 5x19:A (2.2) BS02 HEA 7.1.1.9 GO:0004129 ... P00396 28740863
    423165 5x19:A (2.2) BS03 CU 7.1.1.9 GO:0004129 ... P00396 28740863
    423166 5x19:A (2.2) BS04 MG 7.1.1.9 GO:0004129 ... P00396 28740863
    423167 5x19:B (2.2) BS01 HEA 7.1.1.9 GO:0004129 ... P68530 28740863
    423168 5x19:B (2.2) BS02 CUA 7.1.1.9 GO:0004129 ... P68530 28740863
    423169 5x19:F (2.2) BS01 ZN ? GO:0005740 ... P00428 28740863
    423170 5x19:M (2.2) BS01 DMU ? GO:0006123 ... P10175 28740863
    423171 5x19:N (2.2) BS01 HEA 7.1.1.9 GO:0004129 ... P00396 28740863
    423172 5x19:N (2.2) BS02 HEA 7.1.1.9 GO:0004129 ... P00396 28740863
    423173 5x19:N (2.2) BS03 CU 7.1.1.9 GO:0004129 ... P00396 28740863
    423174 5x19:N (2.2) BS04 MG 7.1.1.9 GO:0004129 ... P00396 28740863
    423175 5x19:O (2.2) BS01 CUA 7.1.1.9 GO:0004129 ... P68530 28740863
    423176 5x19:S (2.2) BS01 ZN ? GO:0005740 ... P00428 28740863
    423177 5x19:Z (2.2) BS01 DMU ? GO:0006123 ... P10175 28740863
    423178 5x1b:A (2.4) BS01 HEA 7.1.1.9 GO:0004129 ... P00396 28740863
    423179 5x1b:A (2.4) BS02 HEA 7.1.1.9 GO:0004129 ... P00396 28740863
    423180 5x1b:A (2.4) BS03 CU 7.1.1.9 GO:0004129 ... P00396 28740863
    423181 5x1b:A (2.4) BS04 MG 7.1.1.9 GO:0004129 ... P00396 28740863
    423182 5x1b:B (2.4) BS01 HEA 7.1.1.9 GO:0004129 ... P68530 28740863
    423183 5x1b:B (2.4) BS02 CUA 7.1.1.9 GO:0004129 ... P68530 28740863
    423184 5x1b:F (2.4) BS01 ZN ? GO:0005740 ... P00428 28740863
    423185 5x1b:M (2.4) BS01 DMU ? GO:0006123 ... P10175 28740863
    423186 5x1b:N (2.4) BS01 HEA 7.1.1.9 GO:0004129 ... P00396 28740863
    423187 5x1b:N (2.4) BS02 HEA 7.1.1.9 GO:0004129 ... P00396 28740863
    423188 5x1b:N (2.4) BS03 CU 7.1.1.9 GO:0004129 ... P00396 28740863
    423189 5x1b:N (2.4) BS04 MG 7.1.1.9 GO:0004129 ... P00396 28740863
    423190 5x1b:O (2.4) BS01 CUA 7.1.1.9 GO:0004129 ... P68530 28740863
    423191 5x1b:S (2.4) BS01 ZN ? GO:0005740 ... P00428 28740863
    423192 5x1b:Z (2.4) BS01 DMU ? GO:0006123 ... P10175 28740863
    423193 5x1f:A (2.2) BS01 HEA 7.1.1.9 GO:0004129 ... P00396 28740863
    423194 5x1f:A (2.2) BS02 HEA 7.1.1.9 GO:0004129 ... P00396 28740863
    423195 5x1f:A (2.2) BS03 CU 7.1.1.9 GO:0004129 ... P00396 28740863
    423196 5x1f:A (2.2) BS04 MG 7.1.1.9 GO:0004129 ... P00396 28740863
    423197 5x1f:B (2.2) BS01 HEA 7.1.1.9 GO:0004129 ... P68530 28740863
    423198 5x1f:B (2.2) BS02 CUA 7.1.1.9 GO:0004129 ... P68530 28740863
    423199 5x1f:F (2.2) BS01 ZN ? GO:0005740 ... P00428 28740863
    423200 5x1f:M (2.2) BS01 DMU ? GO:0006123 ... P10175 28740863

    Reference:
  • Chengxin Zhang, Xi Zhang, Lydia Freddolino, and Yang Zhang. BioLiP2: an updated structure database for biologically relevent ligand-protein interactions, Nucleic Acids Research, gkad630 (2023).
  • Jianyi Yang, Ambrish Roy, and Yang Zhang. BioLiP: a semi-manually curated database for biologically relevant ligand-protein interactions, Nucleic Acids Research, 41: D1096-D1103 (2013) (download the PDF file).