SEQ2FUN

BioLiP
Download all results in tab-seperated text for 942758 receptor-ligand interactions, whose format is explained at readme.txt.
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  • Hover over EC number to view the full name of enzymatic activity.
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    # PDB
    (Resolution Å)
    Site # Ligand EC number GO terms UniProt PubMed Binding
    affinity
    424001 5x8f:A (1.763) BS08 MG 6.2.1.26 GO:0005524 ... P23971 28559280
    424002 5x8f:A (1.763) BS09 CA 6.2.1.26 GO:0005524 ... P23971 28559280
    424003 5x8f:B (1.763) BS01 S0N 6.2.1.26 GO:0005524 ... P23971 28559280
    424004 5x8f:B (1.763) BS02 MG 6.2.1.26 GO:0005524 ... P23971 28559280
    424005 5x8f:B (1.763) BS03 MG 6.2.1.26 GO:0005524 ... P23971 28559280
    424006 5x8f:B (1.763) BS04 MG 6.2.1.26 GO:0005524 ... P23971 28559280
    424007 5x8f:C (1.763) BS01 S0N 6.2.1.26 GO:0005524 ... P23971 28559280
    424008 5x8f:C (1.763) BS02 AMP 6.2.1.26 GO:0005524 ... P23971 28559280
    424009 5x8f:C (1.763) BS03 MG 6.2.1.26 GO:0005524 ... P23971 28559280
    424010 5x8f:C (1.763) BS04 MG 6.2.1.26 GO:0005524 ... P23971 28559280
    424011 5x8f:C (1.763) BS05 CA 6.2.1.26 GO:0005524 ... P23971 28559280
    424012 5x8f:D (1.763) BS01 S0N 6.2.1.26 GO:0005524 ... P23971 28559280
    424013 5x8f:D (1.763) BS02 MG 6.2.1.26 GO:0005524 ... P23971 28559280
    424014 5x8f:D (1.763) BS03 MG 6.2.1.26 GO:0005524 ... P23971 28559280
    424015 5x8f:D (1.763) BS04 MG 6.2.1.26 GO:0005524 ... P23971 28559280
    424016 5x8g:A (1.9) BS01 S0N 6.2.1.26 GO:0005524 ... P23971 28559280
    424017 5x8g:A (1.9) BS02 MG 6.2.1.26 GO:0005524 ... P23971 28559280
    424018 5x8g:A (1.9) BS03 CA 6.2.1.26 GO:0005524 ... P23971 28559280
    424019 5x8g:A (1.9) BS04 CA 6.2.1.26 GO:0005524 ... P23971 28559280
    424020 5x8g:B (1.9) BS01 S0N 6.2.1.26 GO:0005524 ... P23971 28559280
    424021 5x8g:B (1.9) BS02 CA 6.2.1.26 GO:0005524 ... P23971 28559280
    424022 5x8g:C (1.9) BS01 CA 6.2.1.26 GO:0005524 ... P23971 28559280
    424023 5x8g:C (1.9) BS02 CA 6.2.1.26 GO:0005524 ... P23971 28559280
    424024 5x8g:C (1.9) BS03 CA 6.2.1.26 GO:0005524 ... P23971 28559280
    424025 5x8g:C (1.9) BS04 S0N 6.2.1.26 GO:0005524 ... P23971 28559280
    424026 5x8g:D (1.9) BS01 S0N 6.2.1.26 GO:0005524 ... P23971 28559280
    424027 5x8g:D (1.9) BS02 MG 6.2.1.26 GO:0005524 ... P23971 28559280
    424028 5x8i:A (1.902) BS01 SQZ 2.7.12.1 GO:0004672 ... P49759 28692292 MOAD: ic50=2nM
    BindingDB: IC50=2.0nM
    424029 5x8i:B (1.902) BS01 SQZ 2.7.12.1 GO:0004672 ... P49759 28692292 MOAD: ic50=2nM
    BindingDB: IC50=2.0nM
    424030 5x8n:A (2.15) BS01 peptide ? GO:0005737 ... P52293 28383161
    424031 5x8p:0 (3.4) BS01 rna ? GO:0003735 ... P82249 28582576
    424032 5x8p:0 (3.4) BS02 rna ? GO:0003735 ... P82249 28582576
    424033 5x8p:1 (3.4) BS01 rna ? GO:0003735 ... P28804 28582576
    424034 5x8p:1 (3.4) BS02 rna ? GO:0003735 ... P28804 28582576
    424035 5x8p:2 (3.4) BS01 rna ? GO:0003735 ... P28805 28582576
    424036 5x8p:3 (3.4) BS01 rna ? GO:0003735 ... P82244 28582576
    424037 5x8p:4 (3.4) BS01 rna ? GO:0003735 ... P23326 28582576
    424038 5x8p:5 (3.4) BS01 rna ? GO:0003735 ... P12230 28582576
    424039 5x8p:6 (3.4) BS01 rna ? GO:0005840 ... P27684 28582576
    424040 5x8p:7 (3.4) BS01 rna ? GO:0003723 ... P82411 28582576
    424041 5x8p:7 (3.4) BS02 rna ? GO:0003723 ... P82411 28582576
    424042 5x8p:C (3.4) BS01 rna ? GO:0003723 ... P06509 28582576
    424043 5x8p:D (3.4) BS01 rna ? GO:0003735 ... P82191 28582576
    424044 5x8p:D (3.4) BS02 rna ? GO:0003735 ... P82191 28582576
    424045 5x8p:E (3.4) BS01 rna ? GO:0003735 ... O49937 28582576
    424046 5x8p:F (3.4) BS01 rna ? GO:0003735 ... P82192 28582576
    424047 5x8p:F (3.4) BS02 rna ? GO:0003735 ... P82192 28582576
    424048 5x8p:G (3.4) BS01 rna ? GO:0003735 ... P82193 28582576
    424049 5x8p:H (3.4) BS01 rna ? GO:0003735 ... P82180 28582576
    424050 5x8p:K (3.4) BS01 rna ? GO:0003735 ... P12629 28582576
    424051 5x8p:K (3.4) BS02 rna ? GO:0003735 ... P12629 28582576
    424052 5x8p:L (3.4) BS01 rna ? GO:0003735 ... P09596 28582576
    424053 5x8p:L (3.4) BS02 rna ? GO:0003735 ... P09596 28582576
    424054 5x8p:M (3.4) BS01 rna ? GO:0003735 ... P22798 28582576
    424055 5x8p:N (3.4) BS01 rna ? GO:0003735 ... P17353 28582576
    424056 5x8p:N (3.4) BS02 rna ? GO:0003735 ... P17353 28582576
    424057 5x8p:O (3.4) BS01 rna ? GO:0003735 ... P82194 28582576
    424058 5x8p:O (3.4) BS02 rna ? GO:0003735 ... P82194 28582576
    424059 5x8p:P (3.4) BS01 rna ? GO:0003735 ... P82195 28582576
    424060 5x8p:P (3.4) BS02 rna ? GO:0003735 ... P82195 28582576
    424061 5x8p:Q (3.4) BS01 rna ? GO:0003735 ... P82413 28582576
    424062 5x8p:Q (3.4) BS02 rna ? GO:0003735 ... P82413 28582576
    424063 5x8p:Q (3.4) BS03 rna ? GO:0003735 ... P82413 28582576
    424064 5x8p:R (3.4) BS01 rna ? GO:0000027 ... P28803 28582576
    424065 5x8p:S (3.4) BS01 rna ? GO:0003723 ... P24613 28582576
    424066 5x8p:T (3.4) BS01 rna ? GO:0003735 ... P09594 28582576
    424067 5x8p:U (3.4) BS01 rna ? GO:0003735 ... Q9LWB5 28582576
    424068 5x8p:V (3.4) BS01 rna ? GO:0003723 ... P27683 28582576
    424069 5x8p:X (3.4) BS01 rna ? GO:0003735 ... P82190 28582576
    424070 5x8p:X (3.4) BS02 rna ? GO:0003735 ... P82190 28582576
    424071 5x8p:Y (3.4) BS01 rna ? GO:0003735 ... P82245 28582576
    424072 5x8p:Z (3.4) BS01 rna ? GO:0003735 ... P82248 28582576
    424073 5x8p:b (3.4) BS01 rna ? GO:0003735 ... P08242 28582576
    424074 5x8p:c (3.4) BS01 rna ? GO:0003723 ... P09595 28582576
    424075 5x8p:d (3.4) BS01 rna ? GO:0003723 ... P13788 28582576
    424076 5x8p:e (3.4) BS01 rna ? GO:0003723 ... Q9ST69 28582576
    424077 5x8p:f (3.4) BS01 rna ? GO:0003735 ... P82403 28582576
    424078 5x8p:g (3.4) BS01 rna ? GO:0000028 ... P82129 28582576
    424079 5x8p:h (3.4) BS01 rna ? GO:0003735 ... P09597 28582576
    424080 5x8p:i (3.4) BS01 rna ? GO:0003735 ... P82278 28582576
    424081 5x8p:j (3.4) BS01 rna ? GO:0003723 ... P82162 28582576
    424082 5x8p:k (3.4) BS01 rna ? GO:0003735 ... P06506 28582576
    424083 5x8p:l (3.4) BS01 rna ? GO:0003735 ... P62128 28582576
    424084 5x8p:m (3.4) BS01 rna ? GO:0003676 ... P82163 28582576
    424085 5x8p:m (3.4) BS02 rna ? GO:0003676 ... P82163 28582576
    424086 5x8p:n (3.4) BS01 rna ? GO:0003735 ... P06507 28582576
    424087 5x8p:o (3.4) BS01 rna ? GO:0003735 ... Q9M3I4 28582576
    424088 5x8p:o (3.4) BS02 rna ? GO:0003735 ... Q9M3I4 28582576
    424089 5x8p:p (3.4) BS01 rna ? GO:0003735 ... P28807 28582576
    424090 5x8p:q (3.4) BS01 rna ? GO:0003735 ... P82137 28582576
    424091 5x8p:r (3.4) BS01 rna ? GO:0003735 ... Q9M3K7 28582576
    424092 5x8p:s (3.4) BS01 rna ? GO:0000028 ... P06508 28582576
    424093 5x8p:s (3.4) BS02 rna ? GO:0000028 ... P06508 28582576
    424094 5x8p:t (3.4) BS01 rna N/A GO:0003723 ... N/A 28582576
    424095 5x8p:u (3.4) BS01 rna ? GO:0003735 ... P82024 28582576
    424096 5x8p:v (3.4) BS01 rna ? GO:0003676 ... P82277 28582576
    424097 5x8p:x (3.4) BS01 rna ? GO:0005840 ... P47910 28582576
    424098 5x8p:y (3.4) BS01 rna ? GO:0044238 ... P19954 28582576
    424099 5x8q:A (2.2) BS01 peptide ? GO:0003677 ... P51449 28493531
    424100 5x8q:A (2.2) BS02 82R ? GO:0003677 ... P51449 28493531
    424101 5x8q:C (2.2) BS01 peptide ? GO:0003677 ... P51449 28493531
    424102 5x8q:C (2.2) BS02 82R ? GO:0003677 ... P51449 28493531
    424103 5x8q:E (2.2) BS01 peptide ? GO:0003677 ... P51449 28493531
    424104 5x8q:E (2.2) BS02 82R ? GO:0003677 ... P51449 28493531
    424105 5x8q:G (2.2) BS01 peptide ? GO:0003677 ... P51449 28493531
    424106 5x8q:G (2.2) BS02 82R ? GO:0003677 ... P51449 28493531
    424107 5x8r:b (3.7) BS01 rna ? GO:0003735 ... P08242 28582576
    424108 5x8r:c (3.7) BS01 rna ? GO:0003723 ... P09595 28582576
    424109 5x8r:d (3.7) BS01 rna ? GO:0003723 ... P13788 28582576
    424110 5x8r:e (3.7) BS01 rna ? GO:0003723 ... Q9ST69 28582576
    424111 5x8r:f (3.7) BS01 rna ? GO:0003735 ... P82403 28582576
    424112 5x8r:g (3.7) BS01 rna ? GO:0000028 ... P82129 28582576
    424113 5x8r:h (3.7) BS01 rna ? GO:0003735 ... P09597 28582576
    424114 5x8r:i (3.7) BS01 rna ? GO:0003735 ... P82278 28582576
    424115 5x8r:j (3.7) BS01 rna ? GO:0003723 ... P82162 28582576
    424116 5x8r:k (3.7) BS01 rna ? GO:0003735 ... P06506 28582576
    424117 5x8r:l (3.7) BS01 rna ? GO:0003735 ... P62128 28582576
    424118 5x8r:m (3.7) BS01 rna ? GO:0003676 ... B8AQA7 28582576
    424119 5x8r:n (3.7) BS01 rna ? GO:0003735 ... P06507 28582576
    424120 5x8r:o (3.7) BS01 rna ? GO:0003735 ... Q9M3I4 28582576
    424121 5x8r:p (3.7) BS01 rna ? GO:0003735 ... P28807 28582576
    424122 5x8r:q (3.7) BS01 rna ? GO:0003735 ... P82137 28582576
    424123 5x8r:r (3.7) BS01 rna ? GO:0003735 ... Q9M3K7 28582576
    424124 5x8r:s (3.7) BS01 rna ? GO:0000028 ... P06508 28582576
    424125 5x8r:t (3.7) BS01 rna ? GO:0003723 ... P82130 28582576
    424126 5x8r:u (3.7) BS01 rna ? GO:0003735 ... P82024 28582576
    424127 5x8r:v (3.7) BS01 rna ? GO:0003676 ... P82277 28582576
    424128 5x8r:x (3.7) BS01 rna ? GO:0005840 ... P47910 28582576
    424129 5x8r:y (3.7) BS01 rna ? GO:0044238 ... P19954 28582576
    424130 5x8s:A (2.2) BS01 6Q5 ? GO:0003677 ... G1RH57 28493531
    424131 5x8s:B (2.2) BS01 6Q5 ? GO:0003677 ... G1RH57 28493531
    424132 5x8t:0 (3.3) BS01 rna ? GO:0003735 ... P82249 28582576
    424133 5x8t:1 (3.3) BS01 rna ? GO:0003735 ... P28804 28582576
    424134 5x8t:1 (3.3) BS02 rna ? GO:0003735 ... P28804 28582576
    424135 5x8t:2 (3.3) BS01 rna ? GO:0003735 ... P28805 28582576
    424136 5x8t:3 (3.3) BS01 rna ? GO:0003735 ... P82244 28582576
    424137 5x8t:4 (3.3) BS01 rna ? GO:0003735 ... P23326 28582576
    424138 5x8t:5 (3.3) BS01 rna ? GO:0003735 ... P12230 28582576
    424139 5x8t:6 (3.3) BS01 rna ? GO:0005840 ... P27684 28582576
    424140 5x8t:7 (3.3) BS01 rna ? GO:0003723 ... P82411 28582576
    424141 5x8t:7 (3.3) BS02 rna ? GO:0003723 ... P82411 28582576
    424142 5x8t:C (3.3) BS01 rna ? GO:0003723 ... P06509 28582576
    424143 5x8t:D (3.3) BS01 rna ? GO:0003735 ... P82191 28582576
    424144 5x8t:D (3.3) BS02 rna ? GO:0003735 ... P82191 28582576
    424145 5x8t:E (3.3) BS01 rna ? GO:0003735 ... O49937 28582576
    424146 5x8t:F (3.3) BS01 rna ? GO:0003735 ... P82192 28582576
    424147 5x8t:F (3.3) BS02 rna ? GO:0003735 ... P82192 28582576
    424148 5x8t:G (3.3) BS01 rna ? GO:0003735 ... P82193 28582576
    424149 5x8t:H (3.3) BS01 rna ? GO:0003735 ... P82180 28582576
    424150 5x8t:K (3.3) BS01 rna ? GO:0003735 ... P12629 28582576
    424151 5x8t:K (3.3) BS02 rna ? GO:0003735 ... P12629 28582576
    424152 5x8t:L (3.3) BS01 rna ? GO:0003735 ... P09596 28582576
    424153 5x8t:M (3.3) BS01 rna ? GO:0003735 ... P22798 28582576
    424154 5x8t:N (3.3) BS01 rna ? GO:0003735 ... P17353 28582576
    424155 5x8t:N (3.3) BS02 rna ? GO:0003735 ... P17353 28582576
    424156 5x8t:O (3.3) BS01 rna ? GO:0003735 ... P82194 28582576
    424157 5x8t:O (3.3) BS02 rna ? GO:0003735 ... P82194 28582576
    424158 5x8t:P (3.3) BS01 rna ? GO:0003735 ... P82195 28582576
    424159 5x8t:P (3.3) BS02 rna ? GO:0003735 ... P82195 28582576
    424160 5x8t:Q (3.3) BS01 rna ? GO:0003735 ... P82413 28582576
    424161 5x8t:Q (3.3) BS02 rna ? GO:0003735 ... P82413 28582576
    424162 5x8t:R (3.3) BS01 rna ? GO:0000027 ... P28803 28582576
    424163 5x8t:S (3.3) BS01 rna ? GO:0003723 ... P24613 28582576
    424164 5x8t:T (3.3) BS01 rna ? GO:0003735 ... P09594 28582576
    424165 5x8t:U (3.3) BS01 rna ? GO:0003735 ... Q9LWB5 28582576
    424166 5x8t:V (3.3) BS01 rna ? GO:0003723 ... P27683 28582576
    424167 5x8t:X (3.3) BS01 rna ? GO:0003735 ... P82190 28582576
    424168 5x8t:X (3.3) BS02 rna ? GO:0003735 ... P82190 28582576
    424169 5x8t:Y (3.3) BS01 rna ? GO:0003735 ... P82245 28582576
    424170 5x8t:Z (3.3) BS01 rna ? GO:0003735 ... P82248 28582576
    424171 5x8u:A (2.0) BS01 peptide ? GO:0003677 ... G1RH57 28493531
    424172 5x8w:A (2.3) BS01 peptide ? GO:0003677 ... G1RH57 28493531
    424173 5x8x:A (2.6) BS01 peptide ? GO:0003677 ... G1RH57 28493531
    424174 5x8x:A (2.6) BS02 82O ? GO:0003677 ... G1RH57 28493531
    424175 5x8x:C (2.6) BS01 peptide ? GO:0003677 ... G1RH57 28493531
    424176 5x8x:C (2.6) BS02 82O ? GO:0003677 ... G1RH57 28493531
    424177 5x8x:E (2.6) BS01 peptide ? GO:0003677 ... G1RH57 28493531
    424178 5x8x:E (2.6) BS02 82O ? GO:0003677 ... G1RH57 28493531
    424179 5x8x:G (2.6) BS01 peptide ? GO:0003677 ... G1RH57 28493531
    424180 5x8x:G (2.6) BS02 82O ? GO:0003677 ... G1RH57 28493531
    424181 5x93:A (2.2) BS01 K87 3.2.1.17 GO:0003796 ... P00720
    P24530
    28805809 MOAD: ic50=150nM
    424182 5x93:A (2.2) BS02 CLR 3.2.1.17 GO:0003796 ... P00720
    P24530
    28805809
    424183 5x94:A (2.6) BS01 peptide 3.1.3.48 N/A Q06124 28930683
    424184 5x94:A (2.6) BS02 peptide 3.1.3.48 N/A Q06124 28930683
    424185 5x94:B (2.6) BS01 peptide 3.1.3.48 N/A Q06124 28930683
    424186 5x94:B (2.6) BS02 peptide 3.1.3.48 N/A Q06124 28930683
    424187 5x98:A (1.76) BS01 MG 2.7.4.9 GO:0004798 ... Q5SHX3 29652261
    424188 5x98:A (1.76) BS02 MG 2.7.4.9 GO:0004798 ... Q5SHX3 29652261
    424189 5x98:B (1.76) BS01 MG 2.7.4.9 GO:0004798 ... Q5SHX3 29652261
    424190 5x98:B (1.76) BS02 MG 2.7.4.9 GO:0004798 ... Q5SHX3 29652261
    424191 5x98:B (1.76) BS03 MG 2.7.4.9 GO:0004798 ... Q5SHX3 29652261
    424192 5x98:B (1.76) BS04 MG 2.7.4.9 GO:0004798 ... Q5SHX3 29652261
    424193 5x99:A (1.73) BS01 MG 2.7.4.9 GO:0004798 ... Q5SHX3 29652261
    424194 5x99:A (1.73) BS02 MG 2.7.4.9 GO:0004798 ... Q5SHX3 29652261
    424195 5x99:A (1.73) BS03 MG 2.7.4.9 GO:0004798 ... Q5SHX3 29652261
    424196 5x99:B (1.73) BS01 MG 2.7.4.9 GO:0004798 ... Q5SHX3 29652261
    424197 5x99:B (1.73) BS02 MG 2.7.4.9 GO:0004798 ... Q5SHX3 29652261
    424198 5x99:B (1.73) BS03 MG 2.7.4.9 GO:0004798 ... Q5SHX3 29652261
    424199 5x9a:A (1.85) BS01 CA ? GO:0005509 ... Q8T893 29386625
    424200 5x9a:A (1.85) BS02 CA ? GO:0005509 ... Q8T893 29386625

    Reference:
  • Chengxin Zhang, Xi Zhang, Lydia Freddolino, and Yang Zhang. BioLiP2: an updated structure database for biologically relevent ligand-protein interactions, Nucleic Acids Research, gkad630 (2023).
  • Jianyi Yang, Ambrish Roy, and Yang Zhang. BioLiP: a semi-manually curated database for biologically relevant ligand-protein interactions, Nucleic Acids Research, 41: D1096-D1103 (2013) (download the PDF file).