SEQ2FUN

BioLiP
Download all results in tab-seperated text for 1072681 receptor-ligand interactions, whose format is explained at readme.txt.
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    # PDB
    (Resolution Å)
    Site # Ligand EC number GO terms UniProt PubMed Binding
    affinity
    42401 1pq9:A (2.1) BS02 44B ? GO:0003677 ... P55055 12819202
    42402 1pq9:B (2.1) BS01 BNS ? GO:0003677 ... P55055 12819202
    42403 1pq9:B (2.1) BS02 44B ? GO:0003677 ... P55055 12819202
    42404 1pq9:C (2.1) BS01 BNS ? GO:0003677 ... P55055 12819202
    42405 1pq9:C (2.1) BS02 44B ? GO:0003677 ... P55055 12819202
    42406 1pq9:D (2.1) BS01 BNS ? GO:0003677 ... P55055 12819202
    42407 1pq9:D (2.1) BS02 44B ? GO:0003677 ... P55055 12819202
    42408 1pqc:A (2.8) BS01 444 ? GO:0003677 ... P55055 12819202 BindingDB: IC50=9nM, EC50=170nM, Ki=41nM, Kd=103nM
    42409 1pqc:B (2.8) BS01 444 ? GO:0003677 ... P55055 12819202 BindingDB: IC50=9nM, EC50=170nM, Ki=41nM, Kd=103nM
    42410 1pqc:C (2.8) BS01 444 ? GO:0003677 ... P55055 12819202 BindingDB: IC50=9nM, EC50=170nM, Ki=41nM, Kd=103nM
    42411 1pqc:D (2.8) BS01 444 ? GO:0003677 ... P55055 12819202 BindingDB: IC50=9nM, EC50=170nM, Ki=41nM, Kd=103nM
    42412 1pqp:A (2.06) BS01 PO4 1.2.1.11 GO:0004073 ... P44801 15388927
    42413 1pqp:A (2.06) BS02 HSE 1.2.1.11 GO:0004073 ... P44801 15388927
    42414 1pqu:A (1.92) BS01 NAP 1.2.1.11 GO:0004073 ... P44801 15388927
    42415 1pqu:A (1.92) BS02 CYS 1.2.1.11 GO:0004073 ... P44801 15388927
    42416 1pqu:B (1.92) BS01 NAP 1.2.1.11 GO:0004073 ... P44801 15388927
    42417 1pqu:B (1.92) BS02 CYS 1.2.1.11 GO:0004073 ... P44801 15388927
    42418 1pqu:C (1.92) BS01 CYS 1.2.1.11 GO:0004073 ... P44801 15388927
    42419 1pqu:D (1.92) BS01 NAP 1.2.1.11 GO:0004073 ... P44801 15388927
    42420 1pqu:D (1.92) BS02 CYS 1.2.1.11 GO:0004073 ... P44801 15388927
    42421 1pr0:A (2.2) BS01 PO4 2.4.2.1 GO:0003824 ... P0ABP9 12937174
    42422 1pr0:A (2.2) BS02 NOS 2.4.2.1 GO:0003824 ... P0ABP9 12937174
    42423 1pr0:B (2.2) BS01 PO4 2.4.2.1 GO:0003824 ... P0ABP9 12937174
    42424 1pr0:B (2.2) BS02 NOS 2.4.2.1 GO:0003824 ... P0ABP9 12937174
    42425 1pr0:C (2.2) BS01 PO4 2.4.2.1 GO:0003824 ... P0ABP9 12937174
    42426 1pr0:C (2.2) BS02 NOS 2.4.2.1 GO:0003824 ... P0ABP9 12937174
    42427 1pr1:A (2.3) BS01 PO4 2.4.2.1 GO:0003824 ... P0ABP9 12937174
    42428 1pr1:A (2.3) BS02 FMB 2.4.2.1 GO:0003824 ... P0ABP9 12937174 MOAD: Ki=5uM
    42429 1pr1:B (2.3) BS01 PO4 2.4.2.1 GO:0003824 ... P0ABP9 12937174
    42430 1pr1:B (2.3) BS02 FMB 2.4.2.1 GO:0003824 ... P0ABP9 12937174 MOAD: Ki=5uM
    42431 1pr1:C (2.3) BS01 PO4 2.4.2.1 GO:0003824 ... P0ABP9 12937174
    42432 1pr1:C (2.3) BS02 FMB 2.4.2.1 GO:0003824 ... P0ABP9 12937174 MOAD: Ki=5uM
    42433 1pr2:A (2.3) BS01 PO4 2.4.2.1 GO:0003824 ... P0ABP9 12937174
    42434 1pr2:A (2.3) BS02 MDR 2.4.2.1 GO:0003824 ... P0ABP9 12937174
    42435 1pr2:B (2.3) BS01 PO4 2.4.2.1 GO:0003824 ... P0ABP9 12937174
    42436 1pr2:B (2.3) BS02 MDR 2.4.2.1 GO:0003824 ... P0ABP9 12937174
    42437 1pr2:C (2.3) BS01 PO4 2.4.2.1 GO:0003824 ... P0ABP9 12937174
    42438 1pr2:C (2.3) BS02 MDR 2.4.2.1 GO:0003824 ... P0ABP9 12937174
    42439 1pr3:A (2.15) BS01 PO4 1.2.1.11 GO:0004073 ... P44801 15272161
    42440 1pr4:A (2.4) BS01 PO4 2.4.2.1 GO:0003824 ... P0ABP9 12937174
    42441 1pr4:A (2.4) BS02 MTP 2.4.2.1 GO:0003824 ... P0ABP9 12937174
    42442 1pr4:B (2.4) BS01 PO4 2.4.2.1 GO:0003824 ... P0ABP9 12937174
    42443 1pr4:B (2.4) BS02 MTP 2.4.2.1 GO:0003824 ... P0ABP9 12937174
    42444 1pr4:C (2.4) BS01 PO4 2.4.2.1 GO:0003824 ... P0ABP9 12937174
    42445 1pr4:C (2.4) BS02 MTP 2.4.2.1 GO:0003824 ... P0ABP9 12937174
    42446 1pr5:A (2.5) BS01 PO4 2.4.2.1 GO:0003824 ... P0ABP9 12937174
    42447 1pr5:A (2.5) BS02 TBN 2.4.2.1 GO:0003824 ... P0ABP9 12937174 MOAD: Ki=120uM
    42448 1pr5:B (2.5) BS01 PO4 2.4.2.1 GO:0003824 ... P0ABP9 12937174
    42449 1pr5:B (2.5) BS02 TBN 2.4.2.1 GO:0003824 ... P0ABP9 12937174 MOAD: Ki=120uM
    42450 1pr5:C (2.5) BS01 PO4 2.4.2.1 GO:0003824 ... P0ABP9 12937174
    42451 1pr5:C (2.5) BS02 TBN 2.4.2.1 GO:0003824 ... P0ABP9 12937174 MOAD: Ki=120uM
    42452 1pr6:A (2.1) BS01 PO4 2.4.2.1 GO:0003824 ... P0ABP9 12937174
    42453 1pr6:A (2.1) BS02 XYA 2.4.2.1 GO:0003824 ... P0ABP9 12937174
    42454 1pr6:B (2.1) BS01 PO4 2.4.2.1 GO:0003824 ... P0ABP9 12937174
    42455 1pr6:B (2.1) BS02 XYA 2.4.2.1 GO:0003824 ... P0ABP9 12937174
    42456 1pr6:C (2.1) BS01 PO4 2.4.2.1 GO:0003824 ... P0ABP9 12937174
    42457 1pr6:C (2.1) BS02 XYA 2.4.2.1 GO:0003824 ... P0ABP9 12937174
    42458 1pr9:A (1.96) BS01 NAP 1.1.1.10 GO:0001669 ... Q7Z4W1 15103634
    42459 1pr9:A (1.96) BS02 2HP 1.1.1.10 GO:0001669 ... Q7Z4W1 15103634
    42460 1pr9:B (1.96) BS01 NAP 1.1.1.10 GO:0001669 ... Q7Z4W1 15103634
    42461 1pr9:B (1.96) BS02 2HP 1.1.1.10 GO:0001669 ... Q7Z4W1 15103634
    42462 1prc:C (2.3) BS01 HEC ? GO:0005506 ... P07173 7877166
    42463 1prc:C (2.3) BS02 HEC ? GO:0005506 ... P07173 7877166
    42464 1prc:C (2.3) BS03 HEC ? GO:0005506 ... P07173 7877166
    42465 1prc:C (2.3) BS04 HEC ? GO:0005506 ... P07173 7877166
    42466 1prc:L (2.3) BS01 BCB ? GO:0009772 ... P06009 7877166
    42467 1prc:L (2.3) BS02 BCB ? GO:0009772 ... P06009 7877166
    42468 1prc:L (2.3) BS03 BPB ? GO:0009772 ... P06009 7877166
    42469 1prc:L (2.3) BS04 UQ1 ? GO:0009772 ... P06009 7877166
    42470 1prc:L (2.3) BS05 FE ? GO:0009772 ... P06009 7877166
    42471 1prc:L (2.3) BS06 BCB ? GO:0009772 ... P06009 7877166
    42472 1prc:L (2.3) BS07 BPB ? GO:0009772 ... P06009 7877166
    42473 1prc:L (2.3) BS08 MQ7 ? GO:0009772 ... P06009 7877166
    42474 1prc:M (2.3) BS01 BCB ? GO:0009772 ... P06010 7877166
    42475 1prc:M (2.3) BS02 BPB ? GO:0009772 ... P06010 7877166
    42476 1prc:M (2.3) BS03 FE ? GO:0009772 ... P06010 7877166
    42477 1prc:M (2.3) BS04 BCB ? GO:0009772 ... P06010 7877166
    42478 1prc:M (2.3) BS05 BCB ? GO:0009772 ... P06010 7877166
    42479 1prc:M (2.3) BS06 BPB ? GO:0009772 ... P06010 7877166
    42480 1prc:M (2.3) BS07 MQ7 ? GO:0009772 ... P06010 7877166
    42481 1prc:M (2.3) BS08 NS1 ? GO:0009772 ... P06010 7877166
    42482 1prh:A (3.5) BS01 HEM 1.14.99.1 GO:0001516 ... P05979 8121489
    42483 1prh:B (3.5) BS01 HEM 1.14.99.1 GO:0001516 ... P05979 8121489
    42484 1prl:C (-1.00) BS01 peptide 2.7.10.2 GO:0006897 ... P00523 7526465
    42485 1prm:C (-1.00) BS01 peptide 2.7.10.2 GO:0006897 ... P00523 7526465
    42486 1prn:A (1.96) BS01 C8E ? GO:0009279 ... P39767 7525973
    42487 1prn:A (1.96) BS02 C8E ? GO:0009279 ... P39767 7525973
    42488 1pro:A (1.8) BS01 A88 2.7.7.-
    2.7.7.49
    2.7.7.7
    3.1.-.-
    3.1.13.2
    3.1.26.13
    3.4.23.16
    GO:0004190 ... P12499 8558507 MOAD: Ki=5pM
    42489 1pro:B (1.8) BS01 A88 2.7.7.-
    2.7.7.49
    2.7.7.7
    3.1.-.-
    3.1.13.2
    3.1.26.13
    3.4.23.16
    GO:0004190 ... P12499 8558507
    42490 1prr:A (-1.00) BS01 CA ? N/A P02966 8081742
    42491 1prr:A (-1.00) BS02 CA ? N/A P02966 8081742
    42492 1prs:A (-1.00) BS01 CA ? N/A P02966 8081742
    42493 1prs:A (-1.00) BS02 CA ? N/A P02966 8081742
    42494 1prw:A (1.7) BS01 CA ? GO:0000922 ... P62157 14527397
    42495 1prw:A (1.7) BS02 CA ? GO:0000922 ... P62157 14527397
    42496 1prw:A (1.7) BS03 CA ? GO:0000922 ... P62157 14527397
    42497 1prw:A (1.7) BS04 CA ? GO:0000922 ... P62157 14527397
    42498 1ps0:A (3.01) BS01 ZN 1.1.1.2
    1.6.-.-
    GO:0005575 ... Q04894 15289102
    42499 1ps0:A (3.01) BS02 NAP 1.1.1.2
    1.6.-.-
    GO:0005575 ... Q04894 15289102
    42500 1ps3:A (1.8) BS01 ZN 3.2.1.114 GO:0000139 ... Q24451 14636047
    42501 1ps3:A (1.8) BS02 KIF 3.2.1.114 GO:0000139 ... Q24451 14636047 MOAD: Ki=5.2mM
    42502 1ps6:A (2.25) BS01 ZN 1.1.1.262 GO:0000287 ... P19624 12896974
    42503 1ps6:A (2.25) BS02 4TP 1.1.1.262 GO:0000287 ... P19624 12896974
    42504 1ps6:B (2.25) BS01 ZN 1.1.1.262 GO:0000287 ... P19624 12896974
    42505 1ps7:A (2.47) BS01 ZN 1.1.1.262 GO:0000287 ... P19624 12896974
    42506 1ps7:B (2.47) BS01 ZN 1.1.1.262 GO:0000287 ... P19624 12896974
    42507 1ps7:C (2.47) BS01 ZN 1.1.1.262 GO:0000287 ... P19624 12896974
    42508 1ps7:D (2.47) BS01 ZN 1.1.1.262 GO:0000287 ... P19624 12896974
    42509 1ps9:A (2.2) BS01 SF4 1.3.1.34 GO:0005515 ... P42593 12840019
    42510 1ps9:A (2.2) BS02 FAD 1.3.1.34 GO:0005515 ... P42593 12840019
    42511 1ps9:A (2.2) BS03 FMN 1.3.1.34 GO:0005515 ... P42593 12840019
    42512 1ps9:A (2.2) BS04 NAP 1.3.1.34 GO:0005515 ... P42593 12840019
    42513 1ps9:A (2.2) BS05 MDE 1.3.1.34 GO:0005515 ... P42593 12840019
    42514 1psa:A (2.9) BS01 0ZL 3.4.23.1 GO:0004190 ... P00791 1418819
    42515 1psa:B (2.9) BS01 0ZL 3.4.23.1 GO:0004190 ... P00791 1418819
    42516 1psb:A (-1.00) BS01 peptide ? GO:0001726 ... P02638 14661952
    42517 1psb:B (-1.00) BS01 peptide ? GO:0001726 ... P02638 14661952
    42518 1psc:A (2.0) BS01 CD 3.1.8.1 GO:0008270 ... P0A434 7794910
    42519 1psc:A (2.0) BS02 CD 3.1.8.1 GO:0008270 ... P0A434 7794910
    42520 1psc:B (2.0) BS01 CD 3.1.8.1 GO:0008270 ... P0A434 7794910
    42521 1psc:B (2.0) BS02 CD 3.1.8.1 GO:0008270 ... P0A434 7794910
    42522 1psd:A (2.75) BS01 NAD 1.1.1.399
    1.1.1.95
    GO:0004617 ... P0A9T0 7719856
    42523 1psd:A (2.75) BS02 SER 1.1.1.399
    1.1.1.95
    GO:0004617 ... P0A9T0 7719856
    42524 1psd:B (2.75) BS01 NAD 1.1.1.399
    1.1.1.95
    GO:0004617 ... P0A9T0 7719856
    42525 1psd:B (2.75) BS02 SER 1.1.1.399
    1.1.1.95
    GO:0004617 ... P0A9T0 7719856
    42526 1psh:A (2.3) BS01 CA 3.1.1.4 GO:0004623 ... P15445 8419939
    42527 1psh:B (2.3) BS01 CA 3.1.1.4 GO:0004623 ... P15445 8419939
    42528 1psh:C (2.3) BS01 CA 3.1.1.4 GO:0004623 ... P15445 8419939
    42529 1psj:A (2.0) BS01 CA 3.1.1.4 GO:0004623 ... P14418 8636969
    42530 1pso:E (2.0) BS01 peptide 3.4.23.1 GO:0004190 ... P0DJD7 7663352
    42531 1pss:L (3.0) BS01 BCL ? GO:0009772 ... P0C0Y8 8161514
    42532 1pss:L (3.0) BS02 BPH ? GO:0009772 ... P0C0Y8 8161514
    42533 1pss:L (3.0) BS03 U10 ? GO:0009772 ... P0C0Y8 8161514
    42534 1pss:L (3.0) BS04 FE ? GO:0009772 ... P0C0Y8 8161514
    42535 1pss:L (3.0) BS05 BCL ? GO:0009772 ... P0C0Y8 8161514
    42536 1pss:L (3.0) BS06 BCL ? GO:0009772 ... P0C0Y8 8161514
    42537 1pss:L (3.0) BS07 BPH ? GO:0009772 ... P0C0Y8 8161514
    42538 1pss:L (3.0) BS08 U10 ? GO:0009772 ... P0C0Y8 8161514
    42539 1pss:M (3.0) BS01 BPH ? GO:0009772 ... P0C0Y9 8161514
    42540 1pss:M (3.0) BS02 FE ? GO:0009772 ... P0C0Y9 8161514
    42541 1pss:M (3.0) BS03 BCL ? GO:0009772 ... P0C0Y9 8161514
    42542 1pss:M (3.0) BS04 BCL ? GO:0009772 ... P0C0Y9 8161514
    42543 1pss:M (3.0) BS05 BCL ? GO:0009772 ... P0C0Y9 8161514
    42544 1pss:M (3.0) BS06 BPH ? GO:0009772 ... P0C0Y9 8161514
    42545 1pss:M (3.0) BS07 U10 ? GO:0009772 ... P0C0Y9 8161514
    42546 1pss:M (3.0) BS08 CRT ? GO:0009772 ... P0C0Y9 8161514
    42547 1pst:L (3.0) BS01 BCL ? GO:0009772 ... P0C0Y8 8161514
    42548 1pst:L (3.0) BS02 BCL ? GO:0009772 ... P0C0Y8 8161514
    42549 1pst:L (3.0) BS03 BPH ? GO:0009772 ... P0C0Y8 8161514
    42550 1pst:L (3.0) BS04 U10 ? GO:0009772 ... P0C0Y8 8161514
    42551 1pst:L (3.0) BS05 FE ? GO:0009772 ... P0C0Y8 8161514
    42552 1pst:L (3.0) BS06 BCL ? GO:0009772 ... P0C0Y8 8161514
    42553 1pst:L (3.0) BS07 BPH ? GO:0009772 ... P0C0Y8 8161514
    42554 1pst:L (3.0) BS08 U10 ? GO:0009772 ... P0C0Y8 8161514
    42555 1pst:M (3.0) BS01 BCL ? GO:0009772 ... P0C0Y9 8161514
    42556 1pst:M (3.0) BS02 BPH ? GO:0009772 ... P0C0Y9 8161514
    42557 1pst:M (3.0) BS03 U10 ? GO:0009772 ... P0C0Y9 8161514
    42558 1pst:M (3.0) BS04 FE ? GO:0009772 ... P0C0Y9 8161514
    42559 1pst:M (3.0) BS05 BCL ? GO:0009772 ... P0C0Y9 8161514
    42560 1pst:M (3.0) BS06 BPH ? GO:0009772 ... P0C0Y9 8161514
    42561 1pst:M (3.0) BS07 BPH ? GO:0009772 ... P0C0Y9 8161514
    42562 1pst:M (3.0) BS08 U10 ? GO:0009772 ... P0C0Y9 8161514
    42563 1pst:M (3.0) BS09 CRT ? GO:0009772 ... P0C0Y9 8161514
    42564 1psz:A (2.0) BS01 ZN ? GO:0007155 ... P0A4G2 9862808
    42565 1pt2:A (2.1) BS01 GLC 2.4.1.10 GO:0005576 ... P05655 14517548
    42566 1pt2:A (2.1) BS02 FRU 2.4.1.10 GO:0005576 ... P05655 14517548
    42567 1pt2:A (2.1) BS03 CA 2.4.1.10 GO:0005576 ... P05655 14517548
    42568 1pt3:A (2.5) BS01 dna 3.1.-.- GO:0004519 ... Q47112 14962381
    42569 1pt3:A (2.5) BS02 dna 3.1.-.- GO:0004519 ... Q47112 14962381
    42570 1pt3:B (2.5) BS01 dna 3.1.-.- GO:0004519 ... Q47112 14962381
    42571 1pt3:B (2.5) BS02 dna 3.1.-.- GO:0004519 ... Q47112 14962381
    42572 1pt5:A (2.0) BS01 ACO 2.8.3.16 GO:0003824 ... P69902 12844490
    42573 1pt5:B (2.0) BS01 ACO 2.8.3.16 GO:0003824 ... P69902 12844490
    42574 1pt5:B (2.0) BS02 ACO 2.8.3.16 GO:0003824 ... P69902 12844490
    42575 1pt6:A (1.87) BS01 MG ? N/A P56199 14660600
    42576 1pt6:B (1.87) BS01 MG ? N/A P56199 14660600
    42577 1pt8:A (2.2) BS01 ACO 2.8.3.16 GO:0003824 ... P69902 12844490
    42578 1pt8:A (2.2) BS02 ACO 2.8.3.16 GO:0003824 ... P69902 12844490
    42579 1pt8:B (2.2) BS01 ACO 2.8.3.16 GO:0003824 ... P69902 12844490
    42580 1pt9:A (2.42) BS01 TAP 7.1.1.1 N/A Q13423 12791694
    42581 1pt9:B (2.42) BS01 TAP 7.1.1.1 N/A Q13423 12791694
    42582 1ptg:A (2.6) BS01 INS 4.6.1.13 GO:0004436 ... P14262 7664726
    42583 1pth:A (3.4) BS01 HEM 1.14.99.1 GO:0001516 ... P05979 7552725
    42584 1pth:A (3.4) BS02 SAL 1.14.99.1 GO:0001516 ... P05979 7552725
    42585 1pth:B (3.4) BS01 HEM 1.14.99.1 GO:0001516 ... P05979 7552725
    42586 1pth:B (3.4) BS02 SAL 1.14.99.1 GO:0001516 ... P05979 7552725
    42587 1ptj:A (2.61) BS01 SND 7.1.1.1 GO:0003957 ... Q2RSB2 12791694
    42588 1ptj:C (2.61) BS01 NAP 7.1.1.1 N/A Q2RSB4 12791694
    42589 1ptk:A (2.4) BS01 HG 3.4.21.64 GO:0004252 ... P06873 8253733
    42590 1ptk:A (2.4) BS02 CA 3.4.21.64 GO:0004252 ... P06873 8253733
    42591 1ptm:A (1.96) BS01 ZN 1.1.1.262 GO:0000287 ... P19624 12896974
    42592 1ptm:A (1.96) BS02 PO4 1.1.1.262 GO:0000287 ... P19624 12896974
    42593 1ptm:B (1.96) BS01 ZN 1.1.1.262 GO:0000287 ... P19624 12896974
    42594 1pto:B (3.5) BS01 SIA ? GO:0005576 ... P04978 7634099
    42595 1pto:C (3.5) BS01 SIA ? GO:0005576 ... P04979 7634099
    42596 1pto:I (3.5) BS01 SIA ? GO:0005576 ... P04979 7634099
    42597 1ptq:A (1.95) BS01 ZN 2.7.10.2
    2.7.11.13
    N/A P28867 7781068
    42598 1ptq:A (1.95) BS02 ZN 2.7.10.2
    2.7.11.13
    N/A P28867 7781068
    42599 1ptr:A (2.2) BS01 ZN 2.7.10.2
    2.7.11.13
    N/A P28867 7781068
    42600 1ptr:A (2.2) BS02 ZN 2.7.10.2
    2.7.11.13
    N/A P28867 7781068

    Reference:
  • Chengxin Zhang, Xi Zhang, Lydia Freddolino, and Yang Zhang. BioLiP2: an updated structure database for biologically relevent ligand-protein interactions, Nucleic Acids Research, gkad630 (2023).
  • Jianyi Yang, Ambrish Roy, and Yang Zhang. BioLiP: a semi-manually curated database for biologically relevant ligand-protein interactions, Nucleic Acids Research, 41: D1096-D1103 (2013) (download the PDF file).