SEQ2FUN

BioLiP
Download all results in tab-seperated text for 942758 receptor-ligand interactions, whose format is explained at readme.txt.
  • Hover over PDB to view the title of the structure. Click PDB to view the structure at the RCSB PDB database. Resolution -1.00 means the resolution is unavailable, e.g., for NMR structures.
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    # PDB
    (Resolution Å)
    Site # Ligand EC number GO terms UniProt PubMed Binding
    affinity
    426601 5xnp:A (3.729) BS03 CA ? N/A Q96NI6 29348579
    426602 5xnp:B (3.729) BS01 CA ? N/A Q96NI6 29348579
    426603 5xnp:B (3.729) BS02 CA ? N/A Q96NI6 29348579
    426604 5xnp:B (3.729) BS03 CA ? N/A Q96NI6 29348579
    426605 5xnq:A (2.802) BS01 CA ? N/A Q96NI6 29348579
    426606 5xnr:A (2.3) BS01 CA ? GO:0004553 ... A0A3B6UEP6 29057942
    426607 5xnt:A (2.7) BS01 HEM 1.14.15.8
    1.14.99.-
    GO:0004497 ... Q06069 28633515
    426608 5xnv:A (2.696) BS01 peptide ? GO:0006355 ... Q9ULM3 29057918
    426609 5xnx:C (3.7) BS01 MG 2.7.6.5
    3.1.7.2
    GO:0015969 ... P9WHG9 28672070
    426610 5xnx:D (3.7) BS01 MG 2.7.6.5
    3.1.7.2
    GO:0015969 ... P9WHG9 28672070
    426611 5xnz:A (2.3) BS01 FUM 4.3.99.5 GO:0003824 ... A0A0K2JL82 29505698
    426612 5xnz:A (2.3) BS02 FUM 4.3.99.5 GO:0003824 ... A0A0K2JL82 29505698
    426613 5xo2:A (2.201) BS01 peptide ? N/A Q9UKJ1 29046357
    426614 5xo2:A (2.201) BS02 peptide ? N/A Q9UKJ1 29046357
    426615 5xo2:A (2.201) BS03 SIA ? N/A Q9UKJ1 29046357
    426616 5xo2:B (2.201) BS01 peptide ? N/A Q9UKJ1 29046357
    426617 5xo2:B (2.201) BS02 peptide ? N/A Q9UKJ1 29046357
    426618 5xo2:B (2.201) BS03 SIA ? N/A Q9UKJ1 29046357
    426619 5xo7:A (1.88) BS01 36J ? N/A A0A0D2ILK1 N/A
    426620 5xo7:B (1.88) BS01 36J ? N/A A0A0D2ILK1 N/A
    426621 5xo7:C (1.88) BS01 36J ? N/A A0A0D2ILK1 N/A
    426622 5xo7:D (1.88) BS01 36J ? N/A A0A0D2ILK1 N/A
    426623 5xo7:E (1.88) BS01 36J ? N/A A0A0D2ILK1 N/A
    426624 5xo7:F (1.88) BS01 36J ? N/A A0A0D2ILK1 N/A
    426625 5xo7:G (1.88) BS01 36J ? N/A A0A0D2ILK1 N/A
    426626 5xo7:H (1.88) BS01 36J ? N/A A0A0D2ILK1 N/A
    426627 5xo8:A (1.88) BS01 ZER ? N/A A0A0D2ILK1 N/A
    426628 5xo8:B (1.88) BS01 ZER ? N/A A0A0D2ILK1 N/A
    426629 5xo8:C (1.88) BS01 ZER ? N/A A0A0D2ILK1 N/A
    426630 5xo8:D (1.88) BS01 ZER ? N/A A0A0D2ILK1 N/A
    426631 5xo8:E (1.88) BS01 ZER ? N/A A0A0D2ILK1 N/A
    426632 5xo8:F (1.88) BS01 ZER ? N/A A0A0D2ILK1 N/A
    426633 5xo8:G (1.88) BS01 ZER ? N/A A0A0D2ILK1 N/A
    426634 5xo8:H (1.88) BS01 ZER ? N/A A0A0D2ILK1 N/A
    426635 5xob:Z (2.48) BS01 ZN 6.3.4.22 GO:0002101 ... O28025 30121296
    426636 5xob:Z (2.48) BS02 MG 6.3.4.22 GO:0002101 ... O28025 30121296
    426637 5xod:A (1.851) BS01 peptide ? GO:0006355 ... Q15796 29588413
    426638 5xof:A (1.963) BS01 peptide ? N/A Q9UKJ1 29046357
    426639 5xof:A (1.963) BS02 peptide ? N/A Q9UKJ1 29046357
    426640 5xof:A (1.963) BS03 SIA ? N/A Q9UKJ1 29046357
    426641 5xof:B (1.963) BS01 peptide ? N/A Q9UKJ1 29046357
    426642 5xof:B (1.963) BS02 peptide ? N/A Q9UKJ1 29046357
    426643 5xof:B (1.963) BS03 SIA ? N/A Q9UKJ1 29046357
    426644 5xof:C (1.963) BS01 peptide ? N/A Q9UKJ1 29046357
    426645 5xof:C (1.963) BS02 peptide ? N/A Q9UKJ1 29046357
    426646 5xof:C (1.963) BS03 SIA ? N/A Q9UKJ1 29046357
    426647 5xof:D (1.963) BS01 peptide ? N/A Q9UKJ1 29046357
    426648 5xof:D (1.963) BS02 peptide ? N/A Q9UKJ1 29046357
    426649 5xof:D (1.963) BS03 SIA ? N/A Q9UKJ1 29046357
    426650 5xog:A (3.0) BS01 rna 2.7.7.6 GO:0000428 ... C4R4Y0 28775211
    426651 5xog:A (3.0) BS02 dna 2.7.7.6 GO:0000428 ... C4R4Y0 28775211
    426652 5xog:A (3.0) BS03 ZN 2.7.7.6 GO:0000428 ... C4R4Y0 28775211
    426653 5xog:A (3.0) BS04 ZN 2.7.7.6 GO:0000428 ... C4R4Y0 28775211
    426654 5xog:A (3.0) BS05 MG 2.7.7.6 GO:0000428 ... C4R4Y0 28775211
    426655 5xog:A (3.0) BS06 APC 2.7.7.6 GO:0000428 ... C4R4Y0 28775211
    426656 5xog:B (3.0) BS01 rna 2.7.7.6 GO:0000428 ... C4QZQ7 28775211
    426657 5xog:B (3.0) BS02 dna 2.7.7.6 GO:0000428 ... C4QZQ7 28775211
    426658 5xog:B (3.0) BS03 dna 2.7.7.6 GO:0000428 ... C4QZQ7 28775211
    426659 5xog:B (3.0) BS04 ZN 2.7.7.6 GO:0000428 ... C4QZQ7 28775211
    426660 5xog:C (3.0) BS01 ZN ? GO:0000428 ... C4R7L2 28775211
    426661 5xog:E (3.0) BS01 dna ? GO:0001054 ... C4R3P8 28775211
    426662 5xog:I (3.0) BS01 ZN ? GO:0000428 ... F2QPE6 28775211
    426663 5xog:I (3.0) BS02 ZN ? GO:0000428 ... F2QPE6 28775211
    426664 5xog:J (3.0) BS01 ZN ? GO:0000428 ... C4R009 28775211
    426665 5xog:L (3.0) BS01 ZN ? GO:0001054 ... F2QMI1 28775211
    426666 5xog:M (3.0) BS01 ZN ? N/A A0A1B2JER8 28775211
    426667 5xoh:A (2.2) BS01 SAH 2.1.1.69 GO:0005737 ... A0A166U5H3 N/A
    426668 5xoh:A (2.2) BS02 8B6 2.1.1.69 GO:0005737 ... A0A166U5H3 N/A
    426669 5xoi:A (1.8) BS01 MN ? N/A Q10BI6 30061746
    426670 5xoj:A (2.2) BS01 GTP N/A GO:0003924 ... N/A 28791779
    426671 5xoj:A (2.2) BS02 MG N/A GO:0003924 ... N/A 28791779
    426672 5xoj:C (2.2) BS01 peptide ? GO:0000055 ... P30822 28791779
    426673 5xoj:C (2.2) BS02 peptide ? GO:0000055 ... P30822 28791779
    426674 5xoj:C (2.2) BS03 peptide ? GO:0000055 ... P30822 28791779
    426675 5xoj:C (2.2) BS04 peptide ? GO:0000055 ... P30822 28791779
    426676 5xon:A (3.83) BS01 rna 2.7.7.6 GO:0000428 ... C4R4Y0 28775211
    426677 5xon:A (3.83) BS02 dna 2.7.7.6 GO:0000428 ... C4R4Y0 28775211
    426678 5xon:A (3.83) BS03 ZN 2.7.7.6 GO:0000428 ... C4R4Y0 28775211
    426679 5xon:A (3.83) BS04 ZN 2.7.7.6 GO:0000428 ... C4R4Y0 28775211
    426680 5xon:A (3.83) BS05 MG 2.7.7.6 GO:0000428 ... C4R4Y0 28775211
    426681 5xon:B (3.83) BS01 rna 2.7.7.6 GO:0000428 ... C4QZQ7 28775211
    426682 5xon:B (3.83) BS02 dna 2.7.7.6 GO:0000428 ... C4QZQ7 28775211
    426683 5xon:B (3.83) BS03 ZN 2.7.7.6 GO:0000428 ... C4QZQ7 28775211
    426684 5xon:C (3.83) BS01 ZN ? GO:0000428 ... C4R7L2 28775211
    426685 5xon:I (3.83) BS01 ZN ? GO:0000428 ... C4QY79 28775211
    426686 5xon:I (3.83) BS02 ZN ? GO:0000428 ... C4QY79 28775211
    426687 5xon:J (3.83) BS01 ZN ? GO:0000428 ... C4R009 28775211
    426688 5xon:L (3.83) BS01 ZN ? GO:0001054 ... C4QWA8 28775211
    426689 5xon:U (3.83) BS01 ZN ? GO:0003676 ... C4R2R6 28775211
    426690 5xon:V (3.83) BS01 ZN ? GO:0000775 ... C4R0E6 28775211
    426691 5xon:W (3.83) BS01 dna ? GO:0006354 ... C4R370 28775211
    426692 5xoo:A (2.85) BS01 XYP ? GO:0005524 ... T2MHS6 29572475
    426693 5xoo:A (2.85) BS02 GAL ? GO:0005524 ... T2MHS6 29572475
    426694 5xoo:A (2.85) BS03 ADN ? GO:0005524 ... T2MHS6 29572475
    426695 5xoo:B (2.85) BS01 ADN ? GO:0005524 ... T2MHS6 29572475
    426696 5xop:A (1.9) BS01 CA ? GO:0005509 ... M3TKH6 17554780
    426697 5xop:A (1.9) BS02 CA ? GO:0005509 ... M3TKH6 17554780
    426698 5xop:B (1.9) BS01 CA ? GO:0005509 ... M3TKH6 17554780
    426699 5xop:B (1.9) BS02 CA ? GO:0005509 ... M3TKH6 17554780
    426700 5xop:B (1.9) BS03 CA ? GO:0005509 ... M3TKH6 17554780
    426701 5xop:C (1.9) BS01 CA ? GO:0005509 ... M3TKH6 17554780
    426702 5xop:C (1.9) BS02 CA ? GO:0005509 ... M3TKH6 17554780
    426703 5xop:D (1.9) BS01 CA ? GO:0005509 ... M3TKH6 17554780
    426704 5xop:D (1.9) BS02 CA ? GO:0005509 ... M3TKH6 17554780
    426705 5xop:E (1.9) BS01 CA ? GO:0005509 ... M3TKH6 17554780
    426706 5xop:E (1.9) BS02 CA ? GO:0005509 ... M3TKH6 17554780
    426707 5xop:F (1.9) BS01 CA ? GO:0005509 ... M3TKH6 17554780
    426708 5xop:F (1.9) BS02 CA ? GO:0005509 ... M3TKH6 17554780
    426709 5xoq:A (1.87) BS01 peptide 2.5.1.47 GO:0004124 ... D5STP0 N/A
    426710 5xoq:B (1.87) BS01 peptide 2.5.1.47 GO:0004124 ... D5STP0 N/A
    426711 5xos:A (1.697) BS01 peptide ? N/A P01889 28615212
    426712 5xot:A (2.787) BS01 peptide ? N/A P01889 28615212
    426713 5xot:D (2.787) BS01 peptide N/A N/A N/A 28615212
    426714 5xot:E (2.787) BS01 peptide N/A N/A N/A 28615212
    426715 5xou:A (2.63) BS01 dna 3.1.24.- GO:0003676 ... Q746M7 28911094
    426716 5xou:A (2.63) BS02 dna 3.1.24.- GO:0003676 ... Q746M7 28911094
    426717 5xou:A (2.63) BS03 MG 3.1.24.- GO:0003676 ... Q746M7 28911094
    426718 5xou:B (2.63) BS01 dna 3.1.24.- GO:0003676 ... Q746M7 28911094
    426719 5xou:B (2.63) BS02 dna 3.1.24.- GO:0003676 ... Q746M7 28911094
    426720 5xov:A (2.684) BS01 peptide ? N/A P04439 28615212
    426721 5xov:D (2.684) BS01 peptide ? N/A P04439 28615212
    426722 5xov:H (2.684) BS01 peptide N/A N/A N/A 28615212
    426723 5xov:J (2.684) BS01 peptide N/A N/A N/A 28615212
    426724 5xow:A (2.902) BS01 dna 3.1.24.- GO:0003676 ... Q746M7 28911094
    426725 5xow:A (2.902) BS02 rna 3.1.24.- GO:0003676 ... Q746M7 28911094
    426726 5xox:A (3.0) BS01 GTP 2.7.7.79 GO:0000287 ... P53215 28623126
    426727 5xox:A (3.0) BS02 MG 2.7.7.79 GO:0000287 ... P53215 28623126
    426728 5xox:B (3.0) BS01 GTP 2.7.7.79 GO:0000287 ... P53215 28623126
    426729 5xox:B (3.0) BS02 MG 2.7.7.79 GO:0000287 ... P53215 28623126
    426730 5xox:C (3.0) BS01 GTP 2.7.7.79 GO:0000287 ... P53215 28623126
    426731 5xox:C (3.0) BS02 MG 2.7.7.79 GO:0000287 ... P53215 28623126
    426732 5xox:D (3.0) BS01 GTP 2.7.7.79 GO:0000287 ... P53215 28623126
    426733 5xox:D (3.0) BS02 MG 2.7.7.79 GO:0000287 ... P53215 28623126
    426734 5xox:E (3.0) BS01 GTP 2.7.7.79 GO:0000287 ... P53215 28623126
    426735 5xox:E (3.0) BS02 MG 2.7.7.79 GO:0000287 ... P53215 28623126
    426736 5xoy:A (2.39) BS01 LYS 3.5.1.130 GO:0005737 ... Q8VUS5 28720495
    426737 5xp3:A (2.3) BS01 GTP 3.6.5.- GO:0000226 ... Q2XVP4 29691282
    426738 5xp3:A (2.3) BS02 CA 3.6.5.- GO:0000226 ... Q2XVP4 29691282
    426739 5xp3:B (2.3) BS01 GDP ? GO:0000226 ... P02554 29691282
    426740 5xp3:C (2.3) BS01 GTP 3.6.5.- GO:0000226 ... Q2XVP4 29691282
    426741 5xp3:C (2.3) BS02 CA 3.6.5.- GO:0000226 ... Q2XVP4 29691282
    426742 5xp3:D (2.3) BS01 GTP ? GO:0000226 ... P02554 29691282
    426743 5xp3:F (2.3) BS01 ACP N/A GO:0036211 ... N/A 29691282
    426744 5xp5:A (2.101) BS01 8BU 2.7.10.2 GO:0004672 ... P00523 28535041
    426745 5xp5:B (2.101) BS01 8BU 2.7.10.2 GO:0004672 ... P00523 28535041
    426746 5xp6:A (0.95) BS01 ZN 3.5.2.6 GO:0008270 ... C7C422 29382822
    426747 5xp6:A (0.95) BS02 ZN 3.5.2.6 GO:0008270 ... C7C422 29382822
    426748 5xp7:A (2.012) BS01 8C6 2.7.10.2 GO:0004672 ... P00523 28535041
    426749 5xp7:B (2.012) BS01 8C6 2.7.10.2 GO:0004672 ... P00523 28535041
    426750 5xp7:B (2.012) BS02 MG 2.7.10.2 GO:0004672 ... P00523 28535041
    426751 5xp8:A (3.1) BS01 dna 3.1.24.- GO:0003676 ... Q746M7 28911094
    426752 5xp8:A (3.1) BS02 dna 3.1.24.- GO:0003676 ... Q746M7 28911094
    426753 5xp8:A (3.1) BS03 dna 3.1.24.- GO:0003676 ... Q746M7 28911094
    426754 5xp8:A (3.1) BS04 MG 3.1.24.- GO:0003676 ... Q746M7 28911094
    426755 5xp8:A (3.1) BS05 MG 3.1.24.- GO:0003676 ... Q746M7 28911094
    426756 5xp9:A (1.55) BS01 BS3 3.5.2.6 GO:0008270 ... C7C422 29382822
    426757 5xpa:A (2.9) BS01 dna 3.1.24.- GO:0003676 ... Q746M7 28911094
    426758 5xpa:A (2.9) BS02 rna 3.1.24.- GO:0003676 ... Q746M7 28911094
    426759 5xpd:A (2.788) BS01 DCM ? GO:0005506 ... Q9FGQ2 28878024
    426760 5xpg:A (2.8) BS01 dna 3.1.24.- GO:0003676 ... Q746M7 28911094
    426761 5xpg:A (2.8) BS02 rna 3.1.24.- GO:0003676 ... Q746M7 28911094
    426762 5xpi:A (2.2) BS01 8C3 2.3.2.27 N/A Q96T88 29562800 MOAD: Kd=5.2uM
    426763 5xpl:A (2.05) BS01 peptide ? GO:0003677 ... P13053 28954197
    426764 5xpl:A (2.05) BS02 8C9 ? GO:0003677 ... P13053 28954197 MOAD: ic50=20nM
    426765 5xpm:A (2.2) BS01 peptide ? GO:0003677 ... P13053 28954197
    426766 5xpm:A (2.2) BS02 8C0 ? GO:0003677 ... P13053 28954197 MOAD: ic50=23nM
    426767 5xpn:A (1.96) BS01 peptide ? GO:0003677 ... P13053 28954197
    426768 5xpn:A (1.96) BS02 8BO ? GO:0003677 ... P13053 28954197 MOAD: ic50=102nM
    426769 5xpn:A (1.96) BS03 9RO ? GO:0003677 ... P13053 28954197 MOAD: ic50=102nM
    426770 5xpo:A (2.28) BS01 peptide ? GO:0003677 ... P13053 28954197
    426771 5xpo:A (2.28) BS02 8BL ? GO:0003677 ... P13053 28954197 MOAD: ic50=84nM
    426772 5xpp:A (2.85) BS01 peptide ? GO:0003677 ... P13053 28954197
    426773 5xpp:A (2.85) BS02 8BF ? GO:0003677 ... P13053 28954197
    426774 5xpr:A (3.6) BS01 K86 3.2.1.17 GO:0003796 ... P00720
    P24530
    28805809
    426775 5xps:A (1.07) BS01 TPP 2.2.1.1 GO:0004802 ... P34736 30155962
    426776 5xps:A (1.07) BS02 E4P 2.2.1.1 GO:0004802 ... P34736 30155962
    426777 5xps:A (1.07) BS03 CA 2.2.1.1 GO:0004802 ... P34736 30155962
    426778 5xpt:A (2.102) BS01 peptide ? GO:0000122 ... Q9UI95 28887307
    426779 5xpu:A (2.304) BS01 peptide ? GO:0000122 ... Q9UI95 28887307
    426780 5xpx:A (2.77) BS01 ZN 3.1.1.3 GO:0004806 ... A0A0K0PTR1 N/A
    426781 5xpx:A (2.77) BS02 CA 3.1.1.3 GO:0004806 ... A0A0K0PTR1 N/A
    426782 5xpx:E (2.77) BS01 ZN 3.1.1.3 GO:0004806 ... A0A0K0PTR1 N/A
    426783 5xpx:E (2.77) BS02 CA 3.1.1.3 GO:0004806 ... A0A0K0PTR1 N/A
    426784 5xq2:A (3.33) BS01 dna 3.1.24.- GO:0003676 ... Q746M7 28911094
    426785 5xq2:A (3.33) BS02 dna 3.1.24.- GO:0003676 ... Q746M7 28911094
    426786 5xq2:A (3.33) BS03 dna 3.1.24.- GO:0003676 ... Q746M7 28911094
    426787 5xq2:B (3.33) BS01 dna 3.1.24.- GO:0003676 ... Q746M7 28911094
    426788 5xq2:B (3.33) BS02 dna 3.1.24.- GO:0003676 ... Q746M7 28911094
    426789 5xq2:B (3.33) BS03 dna 3.1.24.- GO:0003676 ... Q746M7 28911094
    426790 5xq3:A (2.85) BS01 CA ? GO:0046872 ... B6H7Q7 29574769
    426791 5xq3:B (2.85) BS01 CA ? GO:0046872 ... B6H7Q7 29574769
    426792 5xqa:A (1.14) BS01 TPP 2.2.1.1 GO:0004802 ... P34736 30155962
    426793 5xqa:A (1.14) BS02 CA 2.2.1.1 GO:0004802 ... P34736 30155962
    426794 5xqa:A (1.14) BS03 HSX 2.2.1.1 GO:0004802 ... P34736 30155962
    426795 5xqd:A (1.6) BS01 8CF 3.6.4.10 GO:0005524 ... P07900 N/A BindingDB: IC50=37nM
    426796 5xqe:A (1.699) BS01 8CO 3.6.4.10 GO:0005524 ... P07900 N/A BindingDB: IC50=38nM
    426797 5xqg:A (2.74) BS01 RAM ? GO:0046872 ... B6H7Q7 29574769
    426798 5xqg:A (2.74) BS02 GAD ? GO:0046872 ... B6H7Q7 29574769
    426799 5xqg:A (2.74) BS03 CA ? GO:0046872 ... B6H7Q7 29574769
    426800 5xqg:B (2.74) BS01 RAM ? GO:0046872 ... B6H7Q7 29574769

    Reference:
  • Chengxin Zhang, Xi Zhang, Lydia Freddolino, and Yang Zhang. BioLiP2: an updated structure database for biologically relevent ligand-protein interactions, Nucleic Acids Research, gkad630 (2023).
  • Jianyi Yang, Ambrish Roy, and Yang Zhang. BioLiP: a semi-manually curated database for biologically relevant ligand-protein interactions, Nucleic Acids Research, 41: D1096-D1103 (2013) (download the PDF file).