SEQ2FUN

BioLiP
Download all results in tab-seperated text for 942758 receptor-ligand interactions, whose format is explained at readme.txt.
  • Hover over PDB to view the title of the structure. Click PDB to view the structure at the RCSB PDB database. Resolution -1.00 means the resolution is unavailable, e.g., for NMR structures.
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  • Hover over Ligand to view the full ligand name. Click Ligand to view the 2D diagram and other detail information of the ligand.
  • Hover over EC number to view the full name of enzymatic activity.
  • Hover over GO terms to view all GO terms.
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    # PDB
    (Resolution Å)
    Site # Ligand EC number GO terms UniProt PubMed Binding
    affinity
    427001 5xsv:C (3.723) BS02 CO 3.2.1.14 N/A A0A161KIT4 29800365
    427002 5xsv:C (3.723) BS03 CO 3.2.1.14 N/A A0A161KIT4 29800365
    427003 5xsv:D (3.723) BS01 CO 3.2.1.14 N/A A0A161KIT4 29800365
    427004 5xsv:D (3.723) BS02 CO 3.2.1.14 N/A A0A161KIT4 29800365
    427005 5xsv:D (3.723) BS03 CO 3.2.1.14 N/A A0A161KIT4 29800365
    427006 5xt0:A (1.15) BS01 CA 2.2.1.1 GO:0004802 ... P34736 30155962
    427007 5xt0:A (1.15) BS02 T6F 2.2.1.1 GO:0004802 ... P34736 30155962
    427008 5xt2:A (2.652) BS01 MG N/A GO:0000160 ... N/A 29636388
    427009 5xt2:B (2.652) BS01 MG N/A GO:0000160 ... N/A 29636388
    427010 5xt2:C (2.652) BS01 MG N/A GO:0000160 ... N/A 29636388
    427011 5xt2:D (2.652) BS01 MG N/A GO:0000160 ... N/A 29636388
    427012 5xt2:E (2.652) BS01 MG N/A GO:0000160 ... N/A 29636388
    427013 5xt3:A (2.591) BS01 MN 3.1.4.- GO:0003676 ... A0A0U1MUE2 29203646
    427014 5xt3:A (2.591) BS02 MN 3.1.4.- GO:0003676 ... A0A0U1MUE2 29203646
    427015 5xt3:A (2.591) BS03 C2E 3.1.4.- GO:0003676 ... A0A0U1MUE2 29203646
    427016 5xt3:B (2.591) BS01 MN 3.1.4.- GO:0003676 ... A0A0U1MUE2 29203646
    427017 5xt3:B (2.591) BS02 C2E 3.1.4.- GO:0003676 ... A0A0U1MUE2 29203646
    427018 5xt4:A (1.06) BS01 CA 2.2.1.1 GO:0004802 ... P34736 30155962
    427019 5xt4:A (1.06) BS02 T6F 2.2.1.1 GO:0004802 ... P34736 30155962
    427020 5xt5:A (2.34) BS01 PLP 2.8.1.7 GO:0005515 ... O32164 29235855
    427021 5xt5:B (2.34) BS01 PLP 2.8.1.7 GO:0005515 ... O32164 29235855
    427022 5xt5:C (2.34) BS01 ZN 2.-.-.- GO:0005506 ... O32163 29235855
    427023 5xt5:D (2.34) BS01 ZN 2.-.-.- GO:0005506 ... O32163 29235855
    427024 5xt6:A (3.5) BS01 PDA 2.8.1.7 GO:0005515 ... O32164 29235855
    427025 5xt6:A (3.5) BS02 PDA 2.8.1.7 GO:0005515 ... O32164 29235855
    427026 5xt6:B (3.5) BS01 PDA 2.8.1.7 GO:0005515 ... O32164 29235855
    427027 5xt6:B (3.5) BS02 PDA 2.8.1.7 GO:0005515 ... O32164 29235855
    427028 5xt6:C (3.5) BS01 ZN 2.-.-.- GO:0005506 ... O32163 29235855
    427029 5xt6:D (3.5) BS01 ZN 2.-.-.- GO:0005506 ... O32163 29235855
    427030 5xt8:A (2.01) BS01 MG 2.7.4.9 GO:0004798 ... Q5SHX3 29652261
    427031 5xt8:A (2.01) BS02 MG 2.7.4.9 GO:0004798 ... Q5SHX3 29652261
    427032 5xt8:A (2.01) BS03 MG 2.7.4.9 GO:0004798 ... Q5SHX3 29652261
    427033 5xt8:A (2.01) BS04 MG 2.7.4.9 GO:0004798 ... Q5SHX3 29652261
    427034 5xt8:B (2.01) BS01 MG 2.7.4.9 GO:0004798 ... Q5SHX3 29652261
    427035 5xt8:B (2.01) BS02 MG 2.7.4.9 GO:0004798 ... Q5SHX3 29652261
    427036 5xt8:B (2.01) BS03 MG 2.7.4.9 GO:0004798 ... Q5SHX3 29652261
    427037 5xtb:A (3.4) BS01 SF4 7.1.1.2 GO:0005515 ... P49821 28844695
    427038 5xtb:A (3.4) BS02 FMN 7.1.1.2 GO:0005515 ... P49821 28844695
    427039 5xtb:B (3.4) BS01 SF4 7.1.1.2 GO:0016020 ... O00217 28844695
    427040 5xtb:B (3.4) BS02 SF4 7.1.1.2 GO:0016020 ... O00217 28844695
    427041 5xtb:C (3.4) BS01 SF4 7.1.1.2 GO:0008137 ... O75251 28844695
    427042 5xtb:E (3.4) BS01 8Q1 ? GO:0045271 ... P56556 28844695
    427043 5xtb:I (3.4) BS01 peptide ? GO:0005515 ... O95182 28844695
    427044 5xtb:J (3.4) BS01 NDP ? N/A Q16795 28844695
    427045 5xtb:M (3.4) BS01 SF4 7.1.1.2 GO:0005515 ... P28331 28844695
    427046 5xtb:M (3.4) BS02 SF4 7.1.1.2 GO:0005515 ... P28331 28844695
    427047 5xtb:M (3.4) BS03 FES 7.1.1.2 GO:0005515 ... P28331 28844695
    427048 5xtb:O (3.4) BS01 FES 7.1.1.2 GO:0016491 ... P19404 28844695
    427049 5xtb:Q (3.4) BS01 peptide 7.1.1.2 GO:0016651 ... O75306 28844695
    427050 5xtc:U (3.7) BS01 PLX ? GO:0005515 ... O95167 28844695
    427051 5xtc:a (3.7) BS01 PLX ? N/A O43674 28844695
    427052 5xtc:b (3.7) BS01 PLX ? GO:0005515 ... O95139 28844695
    427053 5xtc:e (3.7) BS01 PLX ? N/A Q9NX14 28844695
    427054 5xtc:f (3.7) BS01 PLX ? GO:0005739 ... O43677 28844695
    427055 5xtc:g (3.7) BS01 PLX ? GO:0005515 ... O95298 28844695
    427056 5xtc:g (3.7) BS02 PLX ? GO:0005515 ... O95298 28844695
    427057 5xtc:g (3.7) BS03 PLX ? GO:0005515 ... O95298 28844695
    427058 5xtc:h (3.7) BS01 PLX ? GO:0005515 ... O43920 28844695
    427059 5xtc:i (3.7) BS01 PLX 7.1.1.2 GO:0001666 ... P03891 28844695
    427060 5xtc:j (3.7) BS01 PLX 7.1.1.2 GO:0005515 ... P03897 28844695
    427061 5xtc:o (3.7) BS01 PLX ? GO:0005654 ... O95168 28844695
    427062 5xtc:p (3.7) BS01 8Q1 ? GO:0005515 ... Q9Y6M9 28844695
    427063 5xtc:r (3.7) BS01 PLX 7.1.1.2 GO:0001666 ... P03905 28844695
    427064 5xtc:r (3.7) BS02 PLX 7.1.1.2 GO:0001666 ... P03905 28844695
    427065 5xtc:s (3.7) BS01 PLX 7.1.1.2 GO:0001666 ... P03886 28844695
    427066 5xtc:s (3.7) BS02 PLX 7.1.1.2 GO:0001666 ... P03886 28844695
    427067 5xtd:A (3.7) BS01 SF4 7.1.1.2 GO:0005515 ... P49821 28844695
    427068 5xtd:A (3.7) BS02 FMN 7.1.1.2 GO:0005515 ... P49821 28844695
    427069 5xtd:B (3.7) BS01 SF4 7.1.1.2 GO:0016020 ... O00217 28844695
    427070 5xtd:B (3.7) BS02 SF4 7.1.1.2 GO:0016020 ... O00217 28844695
    427071 5xtd:B (3.7) BS03 PLX 7.1.1.2 GO:0016020 ... O00217 28844695
    427072 5xtd:C (3.7) BS01 SF4 7.1.1.2 GO:0008137 ... O75251 28844695
    427073 5xtd:E (3.7) BS01 8Q1 ? GO:0045271 ... P56556 28844695
    427074 5xtd:J (3.7) BS01 NDP ? N/A Q16795 28844695
    427075 5xtd:M (3.7) BS01 SF4 7.1.1.2 GO:0005515 ... P28331 28844695
    427076 5xtd:M (3.7) BS02 SF4 7.1.1.2 GO:0005515 ... P28331 28844695
    427077 5xtd:M (3.7) BS03 FES 7.1.1.2 GO:0005515 ... P28331 28844695
    427078 5xtd:O (3.7) BS01 FES 7.1.1.2 GO:0016491 ... P19404 28844695
    427079 5xtd:U (3.7) BS01 PLX ? GO:0005515 ... O95167 28844695
    427080 5xtd:a (3.7) BS01 PLX ? N/A O43674 28844695
    427081 5xtd:b (3.7) BS01 PLX ? GO:0005515 ... O95139 28844695
    427082 5xtd:e (3.7) BS01 PLX ? N/A Q9NX14 28844695
    427083 5xtd:f (3.7) BS01 PLX ? GO:0005739 ... O43677 28844695
    427084 5xtd:g (3.7) BS01 PLX ? GO:0005515 ... O95298 28844695
    427085 5xtd:g (3.7) BS02 PLX ? GO:0005515 ... O95298 28844695
    427086 5xtd:g (3.7) BS03 PLX ? GO:0005515 ... O95298 28844695
    427087 5xtd:h (3.7) BS01 PLX ? GO:0005515 ... O43920 28844695
    427088 5xtd:i (3.7) BS01 PLX 7.1.1.2 GO:0001666 ... P03891 28844695
    427089 5xtd:j (3.7) BS01 PLX 7.1.1.2 GO:0005515 ... P03897 28844695
    427090 5xtd:o (3.7) BS01 PLX ? GO:0005654 ... O95168 28844695
    427091 5xtd:p (3.7) BS01 8Q1 ? GO:0005515 ... Q9Y6M9 28844695
    427092 5xtd:r (3.7) BS01 PLX 7.1.1.2 GO:0001666 ... P03905 28844695
    427093 5xtd:r (3.7) BS02 PLX 7.1.1.2 GO:0001666 ... P03905 28844695
    427094 5xtd:s (3.7) BS01 PLX 7.1.1.2 GO:0001666 ... P03886 28844695
    427095 5xtd:s (3.7) BS02 PLX 7.1.1.2 GO:0001666 ... P03886 28844695
    427096 5xte:C (3.4) BS01 FES 7.1.1.8 GO:0008121 ... P47985 28844695
    427097 5xte:D (3.4) BS01 PLX ? GO:0005515 ... Q9UDW1 28844695
    427098 5xte:H (3.4) BS01 HEC 7.1.1.8 GO:0009055 ... P08574 28844695
    427099 5xte:J (3.4) BS01 HEM ? GO:0001666 ... P00156 28844695
    427100 5xte:J (3.4) BS02 HEM ? GO:0001666 ... P00156 28844695
    427101 5xte:P (3.4) BS01 FES 7.1.1.8 GO:0008121 ... P47985 28844695
    427102 5xte:P (3.4) BS02 PLX 7.1.1.8 GO:0008121 ... P47985 28844695
    427103 5xte:Q (3.4) BS01 PLX ? GO:0005515 ... Q9UDW1 28844695
    427104 5xte:U (3.4) BS01 HEC 7.1.1.8 GO:0009055 ... P08574 28844695
    427105 5xte:V (3.4) BS01 HEM ? GO:0001666 ... P00156 28844695
    427106 5xte:V (3.4) BS02 HEM ? GO:0001666 ... P00156 28844695
    427107 5xtg:B (2.318) BS01 NAD ? GO:0000166 ... G9G7I7 28728845
    427108 5xth:2 (3.9) BS01 ZN ? GO:0005740 ... P00428 28844695
    427109 5xth:A (3.9) BS01 SF4 7.1.1.2 GO:0005515 ... P49821 28844695
    427110 5xth:A (3.9) BS02 FMN 7.1.1.2 GO:0005515 ... P49821 28844695
    427111 5xth:AC (3.9) BS01 FES 7.1.1.8 GO:0008121 ... P47985 28844695
    427112 5xth:AD (3.9) BS01 PLX ? GO:0005515 ... Q9UDW1 28844695
    427113 5xth:AH (3.9) BS01 HEC 7.1.1.8 GO:0009055 ... P08574 28844695
    427114 5xth:AJ (3.9) BS01 HEM ? GO:0001666 ... P00156 28844695
    427115 5xth:AJ (3.9) BS02 HEM ? GO:0001666 ... P00156 28844695
    427116 5xth:AP (3.9) BS01 FES 7.1.1.8 GO:0008121 ... P47985 28844695
    427117 5xth:AP (3.9) BS02 PLX 7.1.1.8 GO:0008121 ... P47985 28844695
    427118 5xth:AQ (3.9) BS01 PLX ? GO:0005515 ... Q9UDW1 28844695
    427119 5xth:AU (3.9) BS01 HEC 7.1.1.8 GO:0009055 ... P08574 28844695
    427120 5xth:AV (3.9) BS01 HEM ? GO:0001666 ... P00156 28844695
    427121 5xth:AV (3.9) BS02 HEM ? GO:0001666 ... P00156 28844695
    427122 5xth:B (3.9) BS01 SF4 7.1.1.2 GO:0016020 ... O00217 28844695
    427123 5xth:B (3.9) BS02 SF4 7.1.1.2 GO:0016020 ... O00217 28844695
    427124 5xth:B (3.9) BS03 PLX 7.1.1.2 GO:0016020 ... O00217 28844695
    427125 5xth:C (3.9) BS01 SF4 7.1.1.2 GO:0008137 ... O75251 28844695
    427126 5xth:E (3.9) BS01 8Q1 ? GO:0045271 ... P56556 28844695
    427127 5xth:J (3.9) BS01 NDP ? N/A Q16795 28844695
    427128 5xth:M (3.9) BS01 SF4 7.1.1.2 GO:0005515 ... P28331 28844695
    427129 5xth:M (3.9) BS02 SF4 7.1.1.2 GO:0005515 ... P28331 28844695
    427130 5xth:M (3.9) BS03 FES 7.1.1.2 GO:0005515 ... P28331 28844695
    427131 5xth:O (3.9) BS01 FES 7.1.1.2 GO:0016491 ... P19404 28844695
    427132 5xth:U (3.9) BS01 PLX ? GO:0005515 ... O95167 28844695
    427133 5xth:a (3.9) BS01 PLX ? N/A O43674 28844695
    427134 5xth:b (3.9) BS01 PLX ? GO:0005515 ... O95139 28844695
    427135 5xth:e (3.9) BS01 PLX ? N/A Q9NX14 28844695
    427136 5xth:f (3.9) BS01 PLX ? GO:0005739 ... O43677 28844695
    427137 5xth:g (3.9) BS01 PLX ? GO:0005515 ... O95298 28844695
    427138 5xth:g (3.9) BS02 PLX ? GO:0005515 ... O95298 28844695
    427139 5xth:g (3.9) BS03 PLX ? GO:0005515 ... O95298 28844695
    427140 5xth:h (3.9) BS01 PLX ? GO:0005515 ... O43920 28844695
    427141 5xth:i (3.9) BS01 PLX 7.1.1.2 GO:0001666 ... P03891 28844695
    427142 5xth:j (3.9) BS01 PLX 7.1.1.2 GO:0005739 ... B9EE38 28844695
    427143 5xth:o (3.9) BS01 PLX ? GO:0005654 ... O95168 28844695
    427144 5xth:p (3.9) BS01 8Q1 ? GO:0005515 ... Q9Y6M9 28844695
    427145 5xth:r (3.9) BS01 PLX 7.1.1.2 GO:0001666 ... P03905 28844695
    427146 5xth:r (3.9) BS02 PLX 7.1.1.2 GO:0001666 ... P03905 28844695
    427147 5xth:s (3.9) BS01 PLX 7.1.1.2 GO:0005739 ... H9PGF0 28844695
    427148 5xth:s (3.9) BS02 PLX 7.1.1.2 GO:0005739 ... H9PGF0 28844695
    427149 5xth:x (3.9) BS01 CU 7.1.1.9 GO:0004129 ... P00396 28844695
    427150 5xth:x (3.9) BS02 MG 7.1.1.9 GO:0004129 ... P00396 28844695
    427151 5xth:x (3.9) BS03 HEA 7.1.1.9 GO:0004129 ... P00396 28844695
    427152 5xth:x (3.9) BS04 HEA 7.1.1.9 GO:0004129 ... P00396 28844695
    427153 5xth:y (3.9) BS01 CU 7.1.1.9 GO:0004129 ... P68530 28844695
    427154 5xth:y (3.9) BS02 CU 7.1.1.9 GO:0004129 ... P68530 28844695
    427155 5xti:2 (17.4) BS01 ZN ? GO:0005740 ... P00428 28844695
    427156 5xti:A (17.4) BS01 SF4 7.1.1.2 GO:0005515 ... P49821 28844695
    427157 5xti:A (17.4) BS02 FMN 7.1.1.2 GO:0005515 ... P49821 28844695
    427158 5xti:AC (17.4) BS01 FES 7.1.1.8 GO:0008121 ... P47985 28844695
    427159 5xti:AD (17.4) BS01 PLX ? GO:0005515 ... Q9UDW1 28844695
    427160 5xti:AH (17.4) BS01 HEC 7.1.1.8 GO:0009055 ... P08574 28844695
    427161 5xti:AJ (17.4) BS01 HEM ? GO:0001666 ... P00156 28844695
    427162 5xti:AJ (17.4) BS02 HEM ? GO:0001666 ... P00156 28844695
    427163 5xti:AP (17.4) BS01 FES 7.1.1.8 GO:0008121 ... P47985 28844695
    427164 5xti:AP (17.4) BS02 PLX 7.1.1.8 GO:0008121 ... P47985 28844695
    427165 5xti:AQ (17.4) BS01 PLX ? GO:0005515 ... Q9UDW1 28844695
    427166 5xti:AU (17.4) BS01 HEC 7.1.1.8 GO:0009055 ... P08574 28844695
    427167 5xti:AV (17.4) BS01 HEM ? GO:0001666 ... P00156 28844695
    427168 5xti:AV (17.4) BS02 HEM ? GO:0001666 ... P00156 28844695
    427169 5xti:B (17.4) BS01 SF4 7.1.1.2 GO:0016020 ... O00217 28844695
    427170 5xti:B (17.4) BS02 SF4 7.1.1.2 GO:0016020 ... O00217 28844695
    427171 5xti:B (17.4) BS03 PLX 7.1.1.2 GO:0016020 ... O00217 28844695
    427172 5xti:B2 (17.4) BS01 ZN ? GO:0005740 ... P00428 28844695
    427173 5xti:BA (17.4) BS01 SF4 7.1.1.2 GO:0005515 ... P49821 28844695
    427174 5xti:BA (17.4) BS02 FMN 7.1.1.2 GO:0005515 ... P49821 28844695
    427175 5xti:BB (17.4) BS01 SF4 7.1.1.2 GO:0016020 ... O00217 28844695
    427176 5xti:BB (17.4) BS02 SF4 7.1.1.2 GO:0016020 ... O00217 28844695
    427177 5xti:BB (17.4) BS03 PLX 7.1.1.2 GO:0016020 ... O00217 28844695
    427178 5xti:BC (17.4) BS01 SF4 7.1.1.2 GO:0008137 ... O75251 28844695
    427179 5xti:BE (17.4) BS01 8Q1 ? GO:0045271 ... P56556 28844695
    427180 5xti:BJ (17.4) BS01 NDP ? N/A Q16795 28844695
    427181 5xti:BM (17.4) BS01 SF4 7.1.1.2 GO:0005515 ... P28331 28844695
    427182 5xti:BM (17.4) BS02 SF4 7.1.1.2 GO:0005515 ... P28331 28844695
    427183 5xti:BM (17.4) BS03 FES 7.1.1.2 GO:0005515 ... P28331 28844695
    427184 5xti:BO (17.4) BS01 FES 7.1.1.2 GO:0016491 ... P19404 28844695
    427185 5xti:BU (17.4) BS01 PLX ? GO:0005515 ... O95167 28844695
    427186 5xti:Ba (17.4) BS01 PLX ? N/A O43674 28844695
    427187 5xti:Bb (17.4) BS01 PLX ? GO:0005515 ... O95139 28844695
    427188 5xti:Be (17.4) BS01 PLX ? N/A Q9NX14 28844695
    427189 5xti:Bf (17.4) BS01 PLX ? GO:0005739 ... O43677 28844695
    427190 5xti:Bg (17.4) BS01 PLX ? GO:0005515 ... O95298 28844695
    427191 5xti:Bg (17.4) BS02 PLX ? GO:0005515 ... O95298 28844695
    427192 5xti:Bg (17.4) BS03 PLX ? GO:0005515 ... O95298 28844695
    427193 5xti:Bh (17.4) BS01 PLX ? GO:0005515 ... O43920 28844695
    427194 5xti:Bi (17.4) BS01 PLX 7.1.1.2 GO:0001666 ... P03891 28844695
    427195 5xti:Bj (17.4) BS01 PLX 7.1.1.2 GO:0005739 ... B9EE38 28844695
    427196 5xti:Bo (17.4) BS01 PLX ? GO:0005654 ... O95168 28844695
    427197 5xti:Bp (17.4) BS01 8Q1 ? GO:0005515 ... Q9Y6M9 28844695
    427198 5xti:Br (17.4) BS01 PLX 7.1.1.2 GO:0001666 ... P03905 28844695
    427199 5xti:Br (17.4) BS02 PLX 7.1.1.2 GO:0001666 ... P03905 28844695
    427200 5xti:Bs (17.4) BS01 PLX 7.1.1.2 GO:0005739 ... H9PGF0 28844695

    Reference:
  • Chengxin Zhang, Xi Zhang, Lydia Freddolino, and Yang Zhang. BioLiP2: an updated structure database for biologically relevent ligand-protein interactions, Nucleic Acids Research, gkad630 (2023).
  • Jianyi Yang, Ambrish Roy, and Yang Zhang. BioLiP: a semi-manually curated database for biologically relevant ligand-protein interactions, Nucleic Acids Research, 41: D1096-D1103 (2013) (download the PDF file).