SEQ2FUN

BioLiP
Download all results in tab-seperated text for 942758 receptor-ligand interactions, whose format is explained at readme.txt.
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    # PDB
    (Resolution Å)
    Site # Ligand EC number GO terms UniProt PubMed Binding
    affinity
    428601 5y5s:K (1.9) BS03 BCL ? GO:0005515 ... D2Z0P2 29618814
    428602 5y5s:K (1.9) BS04 CRT ? GO:0005515 ... D2Z0P2 29618814
    428603 5y5s:K (1.9) BS05 CRT ? GO:0005515 ... D2Z0P2 29618814
    428604 5y5s:L (1.9) BS01 BCL ? GO:0005515 ... D2Z0P3 29618814
    428605 5y5s:L (1.9) BS02 BPH ? GO:0005515 ... D2Z0P3 29618814
    428606 5y5s:L (1.9) BS03 UQ8 ? GO:0005515 ... D2Z0P3 29618814
    428607 5y5s:L (1.9) BS04 UQ8 ? GO:0005515 ... D2Z0P3 29618814
    428608 5y5s:L (1.9) BS05 UQ8 ? GO:0005515 ... D2Z0P3 29618814
    428609 5y5s:L (1.9) BS06 FE ? GO:0005515 ... D2Z0P3 29618814
    428610 5y5s:L (1.9) BS07 BCL ? GO:0005515 ... D2Z0P3 29618814
    428611 5y5s:L (1.9) BS08 BCL ? GO:0005515 ... D2Z0P3 29618814
    428612 5y5s:L (1.9) BS09 BPH ? GO:0005515 ... D2Z0P3 29618814
    428613 5y5s:L (1.9) BS10 MQ8 ? GO:0005515 ... D2Z0P3 29618814
    428614 5y5s:L (1.9) BS11 UQ8 ? GO:0005515 ... D2Z0P3 29618814
    428615 5y5s:M (1.9) BS01 BPH ? GO:0005515 ... A8ASG6 29618814
    428616 5y5s:M (1.9) BS02 FE ? GO:0005515 ... A8ASG6 29618814
    428617 5y5s:M (1.9) BS03 BCL ? GO:0005515 ... A8ASG6 29618814
    428618 5y5s:M (1.9) BS04 BCL ? GO:0005515 ... A8ASG6 29618814
    428619 5y5s:M (1.9) BS05 BCL ? GO:0005515 ... A8ASG6 29618814
    428620 5y5s:M (1.9) BS06 BPH ? GO:0005515 ... A8ASG6 29618814
    428621 5y5s:M (1.9) BS07 MQ8 ? GO:0005515 ... A8ASG6 29618814
    428622 5y5s:M (1.9) BS08 CRT ? GO:0005515 ... A8ASG6 29618814
    428623 5y5s:M (1.9) BS09 UQ8 ? GO:0005515 ... A8ASG6 29618814
    428624 5y5s:N (1.9) BS01 BCL ? GO:0005515 ... D2Z0P1 29618814
    428625 5y5s:N (1.9) BS02 BCL ? GO:0005515 ... D2Z0P1 29618814
    428626 5y5s:N (1.9) BS03 CRT ? GO:0005515 ... D2Z0P1 29618814
    428627 5y5s:O (1.9) BS01 CRT ? GO:0005515 ... D2Z0P2 29618814
    428628 5y5s:O (1.9) BS02 CA ? GO:0005515 ... D2Z0P2 29618814
    428629 5y5s:O (1.9) BS03 BCL ? GO:0005515 ... D2Z0P2 29618814
    428630 5y5s:O (1.9) BS04 BCL ? GO:0005515 ... D2Z0P2 29618814
    428631 5y5s:O (1.9) BS05 CRT ? GO:0005515 ... D2Z0P2 29618814
    428632 5y5s:P (1.9) BS01 BCL ? GO:0005515 ... D2Z0P1 29618814
    428633 5y5s:P (1.9) BS02 BCL ? GO:0005515 ... D2Z0P1 29618814
    428634 5y5s:P (1.9) BS03 CRT ? GO:0005515 ... D2Z0P1 29618814
    428635 5y5s:Q (1.9) BS01 CRT ? GO:0005515 ... D2Z0P2 29618814
    428636 5y5s:Q (1.9) BS02 CRT ? GO:0005515 ... D2Z0P2 29618814
    428637 5y5s:Q (1.9) BS03 CA ? GO:0005515 ... D2Z0P2 29618814
    428638 5y5s:Q (1.9) BS04 BCL ? GO:0005515 ... D2Z0P2 29618814
    428639 5y5s:Q (1.9) BS05 BCL ? GO:0005515 ... D2Z0P2 29618814
    428640 5y5s:Q (1.9) BS06 CRT ? GO:0005515 ... D2Z0P2 29618814
    428641 5y5s:R (1.9) BS01 CRT ? GO:0005515 ... D2Z0P1 29618814
    428642 5y5s:R (1.9) BS02 BCL ? GO:0005515 ... D2Z0P1 29618814
    428643 5y5s:R (1.9) BS03 BCL ? GO:0005515 ... D2Z0P1 29618814
    428644 5y5s:S (1.9) BS01 UQ8 ? GO:0005515 ... D2Z0P2 29618814
    428645 5y5s:S (1.9) BS02 CRT ? GO:0005515 ... D2Z0P2 29618814
    428646 5y5s:S (1.9) BS03 CRT ? GO:0005515 ... D2Z0P2 29618814
    428647 5y5s:S (1.9) BS04 CA ? GO:0005515 ... D2Z0P2 29618814
    428648 5y5s:S (1.9) BS05 BCL ? GO:0005515 ... D2Z0P2 29618814
    428649 5y5s:S (1.9) BS06 BCL ? GO:0005515 ... D2Z0P2 29618814
    428650 5y5s:S (1.9) BS07 CRT ? GO:0005515 ... D2Z0P2 29618814
    428651 5y5s:T (1.9) BS01 CRT ? GO:0005515 ... D2Z0P1 29618814
    428652 5y5s:T (1.9) BS02 BCL ? GO:0005515 ... D2Z0P1 29618814
    428653 5y5s:T (1.9) BS03 BCL ? GO:0005515 ... D2Z0P1 29618814
    428654 5y5s:U (1.9) BS01 CRT ? GO:0005515 ... D2Z0P2 29618814
    428655 5y5s:U (1.9) BS02 CA ? GO:0005515 ... D2Z0P2 29618814
    428656 5y5s:U (1.9) BS03 BCL ? GO:0005515 ... D2Z0P2 29618814
    428657 5y5s:U (1.9) BS04 BCL ? GO:0005515 ... D2Z0P2 29618814
    428658 5y5s:U (1.9) BS05 CRT ? GO:0005515 ... D2Z0P2 29618814
    428659 5y5s:U (1.9) BS06 CRT ? GO:0005515 ... D2Z0P2 29618814
    428660 5y5s:V (1.9) BS01 BCL ? GO:0005515 ... D2Z0P1 29618814
    428661 5y5s:V (1.9) BS02 BCL ? GO:0005515 ... D2Z0P1 29618814
    428662 5y5s:V (1.9) BS03 CRT ? GO:0005515 ... D2Z0P1 29618814
    428663 5y5s:W (1.9) BS01 CRT ? GO:0005515 ... D2Z0P2 29618814
    428664 5y5s:W (1.9) BS02 CRT ? GO:0005515 ... D2Z0P2 29618814
    428665 5y5s:W (1.9) BS03 CA ? GO:0005515 ... D2Z0P2 29618814
    428666 5y5s:W (1.9) BS04 BCL ? GO:0005515 ... D2Z0P2 29618814
    428667 5y5s:W (1.9) BS05 BCL ? GO:0005515 ... D2Z0P2 29618814
    428668 5y5s:W (1.9) BS06 CRT ? GO:0005515 ... D2Z0P2 29618814
    428669 5y5s:X (1.9) BS01 CRT ? GO:0005515 ... D2Z0P1 29618814
    428670 5y5s:X (1.9) BS02 BCL ? GO:0005515 ... D2Z0P1 29618814
    428671 5y5s:X (1.9) BS03 BCL ? GO:0005515 ... D2Z0P1 29618814
    428672 5y5s:Y (1.9) BS01 CRT ? GO:0005515 ... D2Z0P2 29618814
    428673 5y5s:Y (1.9) BS02 CA ? GO:0005515 ... D2Z0P2 29618814
    428674 5y5s:Y (1.9) BS03 BCL ? GO:0005515 ... D2Z0P2 29618814
    428675 5y5s:Y (1.9) BS04 CRT ? GO:0005515 ... D2Z0P2 29618814
    428676 5y5s:Y (1.9) BS05 BCL ? GO:0005515 ... D2Z0P2 29618814
    428677 5y5s:Y (1.9) BS06 CRT ? GO:0005515 ... D2Z0P2 29618814
    428678 5y5s:Z (1.9) BS01 BCL ? GO:0005515 ... D2Z0P1 29618814
    428679 5y5s:Z (1.9) BS02 CRT ? GO:0005515 ... D2Z0P1 29618814
    428680 5y5s:Z (1.9) BS03 BCL ? GO:0005515 ... D2Z0P1 29618814
    428681 5y5t:A (1.8) BS01 8OR 2.7.10.2 GO:0004672 ... P43405 29890824 MOAD: ic50=211nM
    428682 5y5u:A (2.14) BS01 8OU 2.7.10.2 GO:0004672 ... P43405 29890824 MOAD: ic50=17.7nM
    428683 5y5u:B (2.14) BS01 8OU 2.7.10.2 GO:0004672 ... P43405 29890824 MOAD: ic50=17.7nM
    428684 5y5w:A (3.3) BS01 peptide ? GO:0007276 ... Q9Y657 30381828
    428685 5y5w:B (3.3) BS01 peptide ? GO:0007276 ... Q9Y657 30381828
    428686 5y5w:C (3.3) BS01 peptide ? GO:0007276 ... Q9Y657 30381828
    428687 5y5x:A (5.0) BS01 ADP 7.1.2.2 GO:0005515 ... Q56403 29311594
    428688 5y5x:C (5.0) BS01 ADP 7.1.2.2 GO:0005515 ... Q56403 29311594
    428689 5y5y:A (4.7) BS01 ADP 7.1.2.2 GO:0005515 ... Q56403 29311594
    428690 5y5y:C (4.7) BS01 ADP 7.1.2.2 GO:0005515 ... Q56403 29311594
    428691 5y5z:B (6.7) BS01 ADP 7.1.2.2 GO:0005515 ... Q56403 29311594
    428692 5y5z:C (6.7) BS01 ADP 7.1.2.2 GO:0005515 ... Q56403 29311594
    428693 5y60:A (7.5) BS01 ADP 7.1.2.2 GO:0005515 ... Q56403 29311594
    428694 5y60:B (7.5) BS01 ADP 7.1.2.2 GO:0005515 ... Q56403 29311594
    428695 5y62:B (3.0) BS01 5GP ? N/A Q9I4L4 28870806
    428696 5y64:C (2.149) BS01 8LF 5.4.2.11
    5.4.2.4
    GO:0003824 ... P18669 N/A
    428697 5y65:C (2.554) BS01 HKB 5.4.2.11
    5.4.2.4
    GO:0003824 ... P18669 N/A
    428698 5y66:A (2.34) BS01 FAD 1.14.13.9 GO:0003824 ... Q84HF5 29208702
    428699 5y66:A (2.34) BS02 7ZR 1.14.13.9 GO:0003824 ... Q84HF5 29208702
    428700 5y66:A (2.34) BS03 KYN 1.14.13.9 GO:0003824 ... Q84HF5 29208702
    428701 5y6d:A (2.1) BS01 ZN 3.5.2.6 GO:0016787 ... Q9K2N0 29353720
    428702 5y6d:A (2.1) BS02 ZN 3.5.2.6 GO:0016787 ... Q9K2N0 29353720
    428703 5y6d:A (2.1) BS03 8PL 3.5.2.6 GO:0016787 ... Q9K2N0 29353720 MOAD: ic50=54.8nM
    428704 5y6d:B (2.1) BS01 ZN 3.5.2.6 GO:0016787 ... Q9K2N0 29353720
    428705 5y6d:B (2.1) BS02 ZN 3.5.2.6 GO:0016787 ... Q9K2N0 29353720
    428706 5y6d:B (2.1) BS03 8PL 3.5.2.6 GO:0016787 ... Q9K2N0 29353720 MOAD: ic50=54.8nM
    428707 5y6d:C (2.1) BS01 ZN 3.5.2.6 GO:0016787 ... Q9K2N0 29353720
    428708 5y6d:C (2.1) BS02 ZN 3.5.2.6 GO:0016787 ... Q9K2N0 29353720
    428709 5y6d:C (2.1) BS03 8PL 3.5.2.6 GO:0016787 ... Q9K2N0 29353720 MOAD: ic50=54.8nM
    428710 5y6d:D (2.1) BS01 ZN 3.5.2.6 GO:0016787 ... Q9K2N0 29353720
    428711 5y6d:D (2.1) BS02 ZN 3.5.2.6 GO:0016787 ... Q9K2N0 29353720
    428712 5y6d:D (2.1) BS03 8PL 3.5.2.6 GO:0016787 ... Q9K2N0 29353720 MOAD: ic50=54.8nM
    428713 5y6e:A (1.8) BS01 ZN 3.5.2.6 GO:0016787 ... Q9K2N0 29353720
    428714 5y6e:A (1.8) BS02 ZN 3.5.2.6 GO:0016787 ... Q9K2N0 29353720
    428715 5y6e:A (1.8) BS03 8PO 3.5.2.6 GO:0016787 ... Q9K2N0 29353720 MOAD: ic50=13.7nM
    428716 5y6e:B (1.8) BS01 ZN 3.5.2.6 GO:0016787 ... Q9K2N0 29353720
    428717 5y6e:B (1.8) BS02 ZN 3.5.2.6 GO:0016787 ... Q9K2N0 29353720
    428718 5y6e:B (1.8) BS03 8PO 3.5.2.6 GO:0016787 ... Q9K2N0 29353720 MOAD: ic50=13.7nM
    428719 5y6f:A (2.3) BS01 C2E ? GO:0000166 ... P76010 31836667
    428720 5y6f:A (2.3) BS02 C2E ? GO:0000166 ... P76010 31836667
    428721 5y6g:A (2.3) BS01 C2E ? GO:0035438 ... P76010 31836667
    428722 5y6g:A (2.3) BS02 C2E ? GO:0035438 ... P76010 31836667
    428723 5y6k:A (2.86) BS01 FE ? GO:0005515 ... P02787 29323384
    428724 5y6k:A (2.86) BS02 8R6 ? GO:0005515 ... P02787 29323384
    428725 5y6k:A (2.86) BS03 8R6 ? GO:0005515 ... P02787 29323384
    428726 5y6m:A (2.002) BS01 MN 2.1.1.56
    2.1.1.57
    2.7.7.48
    3.4.21.91
    3.6.1.15
    3.6.4.13
    GO:0004386 ... A0A024B7W1 29913559
    428727 5y6m:A (2.002) BS02 ADP 2.1.1.56
    2.1.1.57
    2.7.7.48
    3.4.21.91
    3.6.1.15
    3.6.4.13
    GO:0004386 ... A0A024B7W1 29913559
    428728 5y6m:A (2.002) BS03 AF3 2.1.1.56
    2.1.1.57
    2.7.7.48
    3.4.21.91
    3.6.1.15
    3.6.4.13
    GO:0004386 ... A0A024B7W1 29913559
    428729 5y6n:A (1.571) BS01 MN 2.1.1.56
    2.1.1.57
    2.7.7.48
    3.4.21.91
    3.6.1.15
    3.6.4.13
    GO:0004386 ... A0A024B7W1 29913559
    428730 5y6n:A (1.571) BS02 ADP 2.1.1.56
    2.1.1.57
    2.7.7.48
    3.4.21.91
    3.6.1.15
    3.6.4.13
    GO:0004386 ... A0A024B7W1 29913559
    428731 5y6p:14 (3.5) BS01 PEB N/A GO:0015979 ... N/A 29045394
    428732 5y6p:14 (3.5) BS02 PEB N/A GO:0015979 ... N/A 29045394
    428733 5y6p:14 (3.5) BS03 PEB N/A GO:0015979 ... N/A 29045394
    428734 5y6p:24 (3.5) BS01 PEB N/A GO:0015979 ... N/A 29045394
    428735 5y6p:24 (3.5) BS02 PEB N/A GO:0015979 ... N/A 29045394
    428736 5y6p:24 (3.5) BS03 PEB N/A GO:0015979 ... N/A 29045394
    428737 5y6p:24 (3.5) BS04 PEB N/A GO:0015979 ... N/A 29045394
    428738 5y6p:24 (3.5) BS05 PEB N/A GO:0015979 ... N/A 29045394
    428739 5y6p:24 (3.5) BS06 PEB N/A GO:0015979 ... N/A 29045394
    428740 5y6p:34 (3.5) BS01 PEB N/A N/A N/A 29045394
    428741 5y6p:34 (3.5) BS02 PEB N/A N/A N/A 29045394
    428742 5y6p:34 (3.5) BS03 PEB N/A N/A N/A 29045394
    428743 5y6p:34 (3.5) BS04 PEB N/A N/A N/A 29045394
    428744 5y6p:34 (3.5) BS05 PEB N/A N/A N/A 29045394
    428745 5y6p:34 (3.5) BS06 PEB N/A N/A N/A 29045394
    428746 5y6p:34 (3.5) BS07 PEB N/A N/A N/A 29045394
    428747 5y6p:34 (3.5) BS08 PVN N/A N/A N/A 29045394
    428748 5y6p:34 (3.5) BS09 PUB N/A N/A N/A 29045394
    428749 5y6p:34 (3.5) BS10 PUB N/A N/A N/A 29045394
    428750 5y6p:34 (3.5) BS11 PEB N/A N/A N/A 29045394
    428751 5y6p:34 (3.5) BS12 PEB N/A N/A N/A 29045394
    428752 5y6p:44 (3.5) BS01 PEB N/A N/A N/A 29045394
    428753 5y6p:44 (3.5) BS02 PEB N/A N/A N/A 29045394
    428754 5y6p:44 (3.5) BS03 PEB N/A N/A N/A 29045394
    428755 5y6p:44 (3.5) BS04 PEB N/A N/A N/A 29045394
    428756 5y6p:44 (3.5) BS05 PEB N/A N/A N/A 29045394
    428757 5y6p:44 (3.5) BS06 PEB N/A N/A N/A 29045394
    428758 5y6p:44 (3.5) BS07 PEB N/A N/A N/A 29045394
    428759 5y6p:44 (3.5) BS08 PVN N/A N/A N/A 29045394
    428760 5y6p:44 (3.5) BS09 PUB N/A N/A N/A 29045394
    428761 5y6p:44 (3.5) BS10 PUB N/A N/A N/A 29045394
    428762 5y6p:A1 (3.5) BS01 PEB N/A N/A N/A 29045394
    428763 5y6p:A2 (3.5) BS01 PEB N/A N/A N/A 29045394
    428764 5y6p:A2 (3.5) BS02 PEB N/A N/A N/A 29045394
    428765 5y6p:A2 (3.5) BS03 PEB N/A N/A N/A 29045394
    428766 5y6p:A2 (3.5) BS04 PVN N/A N/A N/A 29045394
    428767 5y6p:A2 (3.5) BS05 PUB N/A N/A N/A 29045394
    428768 5y6p:A2 (3.5) BS06 PUB N/A N/A N/A 29045394
    428769 5y6p:A2 (3.5) BS07 PEB N/A N/A N/A 29045394
    428770 5y6p:A2 (3.5) BS08 PEB N/A N/A N/A 29045394
    428771 5y6p:A2 (3.5) BS09 PEB N/A N/A N/A 29045394
    428772 5y6p:A2 (3.5) BS10 PEB N/A N/A N/A 29045394
    428773 5y6p:A2 (3.5) BS11 PEB N/A N/A N/A 29045394
    428774 5y6p:A2 (3.5) BS12 PEB N/A N/A N/A 29045394
    428775 5y6p:A2 (3.5) BS13 PEB N/A N/A N/A 29045394
    428776 5y6p:A3 (3.5) BS01 PEB N/A GO:0015979 ... N/A 29045394
    428777 5y6p:A3 (3.5) BS02 PEB N/A GO:0015979 ... N/A 29045394
    428778 5y6p:A4 (3.5) BS01 PEB N/A GO:0015979 ... N/A 29045394
    428779 5y6p:A4 (3.5) BS02 PEB N/A GO:0015979 ... N/A 29045394
    428780 5y6p:A4 (3.5) BS03 PEB N/A GO:0015979 ... N/A 29045394
    428781 5y6p:A5 (3.5) BS01 PEB N/A GO:0015979 ... N/A 29045394
    428782 5y6p:A5 (3.5) BS02 PEB N/A GO:0015979 ... N/A 29045394
    428783 5y6p:A6 (3.5) BS01 PEB N/A GO:0015979 ... N/A 29045394
    428784 5y6p:A6 (3.5) BS02 PEB N/A GO:0015979 ... N/A 29045394
    428785 5y6p:A7 (3.5) BS01 PEB N/A GO:0015979 ... N/A 29045394
    428786 5y6p:A8 (3.5) BS01 PEB N/A GO:0015979 ... N/A 29045394
    428787 5y6p:A8 (3.5) BS02 PEB N/A GO:0015979 ... N/A 29045394
    428788 5y6p:A8 (3.5) BS03 PUB N/A GO:0015979 ... N/A 29045394
    428789 5y6p:A8 (3.5) BS04 PEB N/A GO:0015979 ... N/A 29045394
    428790 5y6p:A9 (3.5) BS01 PEB N/A GO:0015979 ... N/A 29045394
    428791 5y6p:A9 (3.5) BS02 PEB N/A GO:0015979 ... N/A 29045394
    428792 5y6p:A9 (3.5) BS03 PEB N/A GO:0015979 ... N/A 29045394
    428793 5y6p:B1 (3.5) BS01 PEB N/A N/A N/A 29045394
    428794 5y6p:B2 (3.5) BS01 PEB N/A GO:0015979 ... N/A 29045394
    428795 5y6p:B2 (3.5) BS02 PEB N/A GO:0015979 ... N/A 29045394
    428796 5y6p:B2 (3.5) BS03 PEB N/A GO:0015979 ... N/A 29045394
    428797 5y6p:B2 (3.5) BS04 PEB N/A GO:0015979 ... N/A 29045394
    428798 5y6p:B3 (3.5) BS01 PEB N/A GO:0015979 ... N/A 29045394
    428799 5y6p:B3 (3.5) BS02 PEB N/A GO:0015979 ... N/A 29045394
    428800 5y6p:B3 (3.5) BS03 PEB N/A GO:0015979 ... N/A 29045394

    Reference:
  • Chengxin Zhang, Xi Zhang, Lydia Freddolino, and Yang Zhang. BioLiP2: an updated structure database for biologically relevent ligand-protein interactions, Nucleic Acids Research, gkad630 (2023).
  • Jianyi Yang, Ambrish Roy, and Yang Zhang. BioLiP: a semi-manually curated database for biologically relevant ligand-protein interactions, Nucleic Acids Research, 41: D1096-D1103 (2013) (download the PDF file).