SEQ2FUN

BioLiP
Download all results in tab-seperated text for 942758 receptor-ligand interactions, whose format is explained at readme.txt.
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  • Hover over EC number to view the full name of enzymatic activity.
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    # PDB
    (Resolution Å)
    Site # Ligand EC number GO terms UniProt PubMed Binding
    affinity
    431801 5yb0:B (2.94) BS01 PLP 2.6.1.52 GO:0004648 ... Q60I38 30959130
    431802 5yb0:B (2.94) BS02 PLP 2.6.1.52 GO:0004648 ... Q60I38 30959130
    431803 5yb0:C (2.94) BS01 PLP 2.6.1.52 GO:0004648 ... Q60I38 30959130
    431804 5yb0:C (2.94) BS02 PLP 2.6.1.52 GO:0004648 ... Q60I38 30959130
    431805 5yb0:D (2.94) BS01 PLP 2.6.1.52 GO:0004648 ... Q60I38 30959130
    431806 5yb0:E (2.94) BS01 PLP 2.6.1.52 GO:0004648 ... Q60I38 30959130
    431807 5yb0:E (2.94) BS02 PLP 2.6.1.52 GO:0004648 ... Q60I38 30959130
    431808 5yb0:F (2.94) BS01 PLP 2.6.1.52 GO:0004648 ... Q60I38 30959130
    431809 5yb0:G (2.94) BS01 PLP 2.6.1.52 GO:0004648 ... Q60I38 30959130
    431810 5yb0:G (2.94) BS02 PLP 2.6.1.52 GO:0004648 ... Q60I38 30959130
    431811 5yb0:H (2.94) BS01 PLP 2.6.1.52 GO:0004648 ... Q60I38 30959130
    431812 5yb0:I (2.94) BS01 PLP 2.6.1.52 GO:0004648 ... Q60I38 30959130
    431813 5yb0:J (2.94) BS01 PLP 2.6.1.52 GO:0004648 ... Q60I38 30959130
    431814 5yb0:K (2.94) BS01 PLP 2.6.1.52 GO:0004648 ... Q60I38 30959130
    431815 5yb1:A (2.616) BS01 PLM ? GO:0003677 ... P02768 29722993
    431816 5yb1:A (2.616) BS02 PLM ? GO:0003677 ... P02768 29722993
    431817 5yb1:A (2.616) BS03 PLM ? GO:0003677 ... P02768 29722993
    431818 5yb1:A (2.616) BS04 PLM ? GO:0003677 ... P02768 29722993
    431819 5yb1:A (2.616) BS05 PLM ? GO:0003677 ... P02768 29722993
    431820 5yb1:A (2.616) BS06 PLM ? GO:0003677 ... P02768 29722993
    431821 5yb1:A (2.616) BS07 PLM ? GO:0003677 ... P02768 29722993
    431822 5yb1:A (2.616) BS08 8ZR ? GO:0003677 ... P02768 29722993
    431823 5yb1:B (2.616) BS01 PLM ? GO:0003677 ... P02768 29722993
    431824 5yb1:B (2.616) BS02 PLM ? GO:0003677 ... P02768 29722993
    431825 5yb1:B (2.616) BS03 PLM ? GO:0003677 ... P02768 29722993
    431826 5yb1:B (2.616) BS04 PLM ? GO:0003677 ... P02768 29722993
    431827 5yb1:B (2.616) BS05 PLM ? GO:0003677 ... P02768 29722993
    431828 5yb1:B (2.616) BS06 PLM ? GO:0003677 ... P02768 29722993
    431829 5yb1:B (2.616) BS07 8ZR ? GO:0003677 ... P02768 29722993
    431830 5yb2:A (3.8) BS01 peptide ? N/A P04578 29535974
    431831 5yb2:A (3.8) BS02 peptide ? N/A P04578 29535974
    431832 5yb2:A (3.8) BS03 peptide ? N/A P04578 29535974
    431833 5yb2:B (3.8) BS01 peptide ? N/A P04578 29535974
    431834 5yb2:B (3.8) BS02 peptide ? N/A P04578 29535974
    431835 5yb2:C (3.8) BS01 peptide ? N/A P04578 29535974
    431836 5yb2:C (3.8) BS02 peptide ? N/A P04578 29535974
    431837 5yb2:D (3.8) BS01 peptide ? N/A P04578 29535974
    431838 5yb2:D (3.8) BS02 peptide ? N/A P04578 29535974
    431839 5yb2:E (3.8) BS01 peptide ? N/A P04578 29535974
    431840 5yb2:E (3.8) BS02 peptide ? N/A P04578 29535974
    431841 5yb2:E (3.8) BS03 peptide ? N/A P04578 29535974
    431842 5yb2:F (3.8) BS01 peptide ? N/A P04578 29535974
    431843 5yb2:M (3.8) BS01 peptide ? N/A P04578 29535974
    431844 5yb3:D (2.043) BS01 peptide ? N/A P04578 29535974
    431845 5yb3:D (2.043) BS02 peptide ? N/A P04578 29535974
    431846 5yb3:E (2.043) BS01 peptide ? N/A P04578 29535974
    431847 5yb3:E (2.043) BS02 peptide ? N/A P04578 29535974
    431848 5yb3:F (2.043) BS01 peptide ? N/A P04578 29535974
    431849 5yb3:F (2.043) BS02 peptide ? N/A P04578 29535974
    431850 5yb4:D (2.5) BS01 peptide ? N/A P04578 29535974
    431851 5yb4:D (2.5) BS02 peptide ? N/A P04578 29535974
    431852 5yb4:E (2.5) BS01 peptide ? N/A P04578 29535974
    431853 5yb4:E (2.5) BS02 peptide ? N/A P04578 29535974
    431854 5yb4:F (2.5) BS01 peptide ? N/A P04578 29535974
    431855 5yb4:F (2.5) BS02 peptide ? N/A P04578 29535974
    431856 5yb5:B (1.903) BS01 SNO ? GO:0003824 ... A0A0R5NGA4 N/A
    431857 5yb6:A (2.1) BS01 FAD 1.13.12.3 GO:0000166 ... W6JQJ6 29511608
    431858 5yb6:A (2.1) BS02 LYS 1.13.12.3 GO:0000166 ... W6JQJ6 29511608
    431859 5yb6:A (2.1) BS03 LYS 1.13.12.3 GO:0000166 ... W6JQJ6 29511608
    431860 5yb6:A (2.1) BS04 LYS 1.13.12.3 GO:0000166 ... W6JQJ6 29511608
    431861 5yb6:B (2.1) BS01 FAD 1.13.12.3 GO:0000166 ... W6JQJ6 29511608
    431862 5yb6:B (2.1) BS02 LYS 1.13.12.3 GO:0000166 ... W6JQJ6 29511608
    431863 5yb6:B (2.1) BS03 LYS 1.13.12.3 GO:0000166 ... W6JQJ6 29511608
    431864 5yb6:B (2.1) BS04 LYS 1.13.12.3 GO:0000166 ... W6JQJ6 29511608
    431865 5yb6:C (2.1) BS01 LYS 1.13.12.3 GO:0000166 ... W6JQJ6 29511608
    431866 5yb6:C (2.1) BS02 FAD 1.13.12.3 GO:0000166 ... W6JQJ6 29511608
    431867 5yb6:C (2.1) BS03 LYS 1.13.12.3 GO:0000166 ... W6JQJ6 29511608
    431868 5yb6:C (2.1) BS04 LYS 1.13.12.3 GO:0000166 ... W6JQJ6 29511608
    431869 5yb6:D (2.1) BS01 LYS 1.13.12.3 GO:0000166 ... W6JQJ6 29511608
    431870 5yb6:D (2.1) BS02 FAD 1.13.12.3 GO:0000166 ... W6JQJ6 29511608
    431871 5yb6:D (2.1) BS03 LYS 1.13.12.3 GO:0000166 ... W6JQJ6 29511608
    431872 5yb6:D (2.1) BS04 LYS 1.13.12.3 GO:0000166 ... W6JQJ6 29511608
    431873 5yb7:A (2.0) BS01 FAD 1.13.12.3 GO:0000166 ... W6JQJ6 29511608
    431874 5yb7:A (2.0) BS02 ORN 1.13.12.3 GO:0000166 ... W6JQJ6 29511608
    431875 5yb7:A (2.0) BS03 ORN 1.13.12.3 GO:0000166 ... W6JQJ6 29511608
    431876 5yb7:A (2.0) BS04 ORN 1.13.12.3 GO:0000166 ... W6JQJ6 29511608
    431877 5yb7:B (2.0) BS01 FAD 1.13.12.3 GO:0000166 ... W6JQJ6 29511608
    431878 5yb7:B (2.0) BS02 ORN 1.13.12.3 GO:0000166 ... W6JQJ6 29511608
    431879 5yb7:B (2.0) BS03 ORN 1.13.12.3 GO:0000166 ... W6JQJ6 29511608
    431880 5yb7:B (2.0) BS04 ORN 1.13.12.3 GO:0000166 ... W6JQJ6 29511608
    431881 5yb7:C (2.0) BS01 ORN 1.13.12.3 GO:0000166 ... W6JQJ6 29511608
    431882 5yb7:C (2.0) BS02 FAD 1.13.12.3 GO:0000166 ... W6JQJ6 29511608
    431883 5yb7:C (2.0) BS03 ORN 1.13.12.3 GO:0000166 ... W6JQJ6 29511608
    431884 5yb7:C (2.0) BS04 ORN 1.13.12.3 GO:0000166 ... W6JQJ6 29511608
    431885 5yb7:D (2.0) BS01 FAD 1.13.12.3 GO:0000166 ... W6JQJ6 29511608
    431886 5yb7:D (2.0) BS02 ORN 1.13.12.3 GO:0000166 ... W6JQJ6 29511608
    431887 5yb7:D (2.0) BS03 ORN 1.13.12.3 GO:0000166 ... W6JQJ6 29511608
    431888 5yb8:A (2.3) BS01 ARG 1.13.12.3 GO:0000166 ... W6JQJ6 29511608
    431889 5yb8:A (2.3) BS02 ARG 1.13.12.3 GO:0000166 ... W6JQJ6 29511608
    431890 5yb8:A (2.3) BS03 ARG 1.13.12.3 GO:0000166 ... W6JQJ6 29511608
    431891 5yb8:A (2.3) BS04 FAD 1.13.12.3 GO:0000166 ... W6JQJ6 29511608
    431892 5yb8:B (2.3) BS01 ARG 1.13.12.3 GO:0000166 ... W6JQJ6 29511608
    431893 5yb8:B (2.3) BS02 ARG 1.13.12.3 GO:0000166 ... W6JQJ6 29511608
    431894 5yb8:B (2.3) BS03 FAD 1.13.12.3 GO:0000166 ... W6JQJ6 29511608
    431895 5yb8:B (2.3) BS04 ARG 1.13.12.3 GO:0000166 ... W6JQJ6 29511608
    431896 5yb8:C (2.3) BS01 ARG 1.13.12.3 GO:0000166 ... W6JQJ6 29511608
    431897 5yb8:C (2.3) BS02 ARG 1.13.12.3 GO:0000166 ... W6JQJ6 29511608
    431898 5yb8:C (2.3) BS03 ARG 1.13.12.3 GO:0000166 ... W6JQJ6 29511608
    431899 5yb8:C (2.3) BS04 FAD 1.13.12.3 GO:0000166 ... W6JQJ6 29511608
    431900 5yb8:D (2.3) BS01 ARG 1.13.12.3 GO:0000166 ... W6JQJ6 29511608
    431901 5yb8:D (2.3) BS02 ARG 1.13.12.3 GO:0000166 ... W6JQJ6 29511608
    431902 5yb8:D (2.3) BS03 FAD 1.13.12.3 GO:0000166 ... W6JQJ6 29511608
    431903 5yba:A (2.062) BS01 peptide 5.2.1.8 GO:0000413 ... A2DT06 29615721
    431904 5yba:C (2.062) BS01 peptide 5.2.1.8 GO:0000413 ... A2DT06 29615721
    431905 5ybb:A (3.2) BS01 SAM 2.1.1.72 GO:0003676 ... Q8R9Q4 28973912
    431906 5ybb:B (3.2) BS01 SAM 2.1.1.72 GO:0003676 ... Q8R9Q4 28973912
    431907 5ybb:D (3.2) BS01 dna ? GO:0003677 ... Q8R9Q6 28973912
    431908 5ybb:D (3.2) BS02 dna ? GO:0003677 ... Q8R9Q6 28973912
    431909 5ybb:G (3.2) BS01 dna ? GO:0003677 ... Q8R9Q6 28973912
    431910 5ybb:G (3.2) BS02 dna ? GO:0003677 ... Q8R9Q6 28973912
    431911 5ybd:A (2.769) BS01 dna ? GO:0003700 ... P11308 30279318
    431912 5ybd:A (2.769) BS02 dna ? GO:0003700 ... P11308 30279318
    431913 5ybd:X (2.769) BS01 dna ? GO:0003700 ... P11308 30279318
    431914 5ybd:X (2.769) BS02 dna ? GO:0003700 ... P11308 30279318
    431915 5ybe:A (2.111) BS01 peptide ? GO:0030837 ... Q6AXG6 29158259
    431916 5ybf:A (1.5) BS01 GLU ? GO:0015276 ... P42262 29298820
    431917 5ybf:A (1.5) BS02 8SR ? GO:0015276 ... P42262 29298820 MOAD: Kd=543nM
    431918 5ybf:A (1.5) BS03 ZN ? GO:0015276 ... P42262 29298820
    431919 5ybf:B (1.5) BS01 8SR ? GO:0015276 ... P42262 29298820
    431920 5ybf:B (1.5) BS02 GLU ? GO:0015276 ... P42262 29298820
    431921 5ybf:B (1.5) BS03 ZN ? GO:0015276 ... P42262 29298820
    431922 5ybf:C (1.5) BS01 GLU ? GO:0015276 ... P42262 29298820
    431923 5ybf:C (1.5) BS02 ZN ? GO:0015276 ... P42262 29298820
    431924 5ybf:C (1.5) BS03 ZN ? GO:0015276 ... P42262 29298820
    431925 5ybf:C (1.5) BS04 8SR ? GO:0015276 ... P42262 29298820 MOAD: Kd=543nM
    431926 5ybf:D (1.5) BS01 8SR ? GO:0015276 ... P42262 29298820
    431927 5ybf:D (1.5) BS02 GLU ? GO:0015276 ... P42262 29298820
    431928 5ybf:D (1.5) BS03 ZN ? GO:0015276 ... P42262 29298820
    431929 5ybf:D (1.5) BS04 ZN ? GO:0015276 ... P42262 29298820
    431930 5ybf:E (1.5) BS01 ZN ? GO:0015276 ... P42262 29298820
    431931 5ybf:E (1.5) BS02 GLU ? GO:0015276 ... P42262 29298820
    431932 5ybf:E (1.5) BS03 8SR ? GO:0015276 ... P42262 29298820 MOAD: Kd=543nM
    431933 5ybf:F (1.5) BS01 8SR ? GO:0015276 ... P42262 29298820
    431934 5ybf:F (1.5) BS02 GLU ? GO:0015276 ... P42262 29298820
    431935 5ybf:F (1.5) BS03 ZN ? GO:0015276 ... P42262 29298820
    431936 5ybg:A (1.52) BS01 GLU ? GO:0015276 ... P42262 29298820
    431937 5ybg:A (1.52) BS02 8SO ? GO:0015276 ... P42262 29298820 MOAD: ic50=0.03uM
    431938 5ybg:A (1.52) BS03 ZN ? GO:0015276 ... P42262 29298820
    431939 5ybg:B (1.52) BS01 8SO ? GO:0015276 ... P42262 29298820
    431940 5ybg:B (1.52) BS02 GLU ? GO:0015276 ... P42262 29298820
    431941 5ybg:B (1.52) BS03 ZN ? GO:0015276 ... P42262 29298820
    431942 5ybg:C (1.52) BS01 GLU ? GO:0015276 ... P42262 29298820
    431943 5ybg:C (1.52) BS02 8SO ? GO:0015276 ... P42262 29298820 MOAD: ic50=0.03uM
    431944 5ybg:C (1.52) BS03 ZN ? GO:0015276 ... P42262 29298820
    431945 5ybg:C (1.52) BS04 ZN ? GO:0015276 ... P42262 29298820
    431946 5ybg:D (1.52) BS01 8SO ? GO:0015276 ... P42262 29298820
    431947 5ybg:D (1.52) BS02 GLU ? GO:0015276 ... P42262 29298820
    431948 5ybg:D (1.52) BS03 ZN ? GO:0015276 ... P42262 29298820
    431949 5ybg:D (1.52) BS04 ZN ? GO:0015276 ... P42262 29298820
    431950 5ybg:E (1.52) BS01 ZN ? GO:0015276 ... P42262 29298820
    431951 5ybg:E (1.52) BS02 GLU ? GO:0015276 ... P42262 29298820
    431952 5ybg:E (1.52) BS03 8SO ? GO:0015276 ... P42262 29298820 MOAD: ic50=0.03uM
    431953 5ybg:F (1.52) BS01 8SO ? GO:0015276 ... P42262 29298820
    431954 5ybg:F (1.52) BS02 GLU ? GO:0015276 ... P42262 29298820
    431955 5ybg:F (1.52) BS03 ZN ? GO:0015276 ... P42262 29298820
    431956 5ybh:A (2.5) BS01 MG 7.4.2.8 GO:0005524 ... P0A1C1 30013545
    431957 5ybh:A (2.5) BS02 MG 7.4.2.8 GO:0005524 ... P0A1C1 30013545
    431958 5ybh:A (2.5) BS03 MG 7.4.2.8 GO:0005524 ... P0A1C1 30013545
    431959 5ybh:B (2.5) BS01 MG 7.4.2.8 GO:0005524 ... P0A1C1 30013545
    431960 5ybh:B (2.5) BS02 MG 7.4.2.8 GO:0005524 ... P0A1C1 30013545
    431961 5ybh:B (2.5) BS03 MG 7.4.2.8 GO:0005524 ... P0A1C1 30013545
    431962 5ybh:B (2.5) BS04 MG 7.4.2.8 GO:0005524 ... P0A1C1 30013545
    431963 5ybh:B (2.5) BS05 MG 7.4.2.8 GO:0005524 ... P0A1C1 30013545
    431964 5ybh:B (2.5) BS06 MG 7.4.2.8 GO:0005524 ... P0A1C1 30013545
    431965 5ybh:B (2.5) BS07 MG 7.4.2.8 GO:0005524 ... P0A1C1 30013545
    431966 5ybi:A (2.268) BS01 ANP 7.4.2.8 GO:0005524 ... P0A1C1 30013545
    431967 5ybi:A (2.268) BS02 MG 7.4.2.8 GO:0005524 ... P0A1C1 30013545
    431968 5ybi:A (2.268) BS03 MG 7.4.2.8 GO:0005524 ... P0A1C1 30013545
    431969 5ybi:A (2.268) BS04 MG 7.4.2.8 GO:0005524 ... P0A1C1 30013545
    431970 5ybi:A (2.268) BS05 MG 7.4.2.8 GO:0005524 ... P0A1C1 30013545
    431971 5ybi:A (2.268) BS06 MG 7.4.2.8 GO:0005524 ... P0A1C1 30013545
    431972 5ybi:A (2.268) BS07 MG 7.4.2.8 GO:0005524 ... P0A1C1 30013545
    431973 5ybi:A (2.268) BS08 MG 7.4.2.8 GO:0005524 ... P0A1C1 30013545
    431974 5ybi:B (2.268) BS01 MG 7.4.2.8 GO:0005524 ... P0A1C1 30013545
    431975 5ybi:B (2.268) BS02 MG 7.4.2.8 GO:0005524 ... P0A1C1 30013545
    431976 5ybi:B (2.268) BS03 MG 7.4.2.8 GO:0005524 ... P0A1C1 30013545
    431977 5ybi:B (2.268) BS04 MG 7.4.2.8 GO:0005524 ... P0A1C1 30013545
    431978 5ybi:B (2.268) BS05 MG 7.4.2.8 GO:0005524 ... P0A1C1 30013545
    431979 5ybi:B (2.268) BS06 MG 7.4.2.8 GO:0005524 ... P0A1C1 30013545
    431980 5ybi:B (2.268) BS07 MG 7.4.2.8 GO:0005524 ... P0A1C1 30013545
    431981 5ybi:B (2.268) BS08 MG 7.4.2.8 GO:0005524 ... P0A1C1 30013545
    431982 5ybi:B (2.268) BS09 MG 7.4.2.8 GO:0005524 ... P0A1C1 30013545
    431983 5ybi:B (2.268) BS10 MG 7.4.2.8 GO:0005524 ... P0A1C1 30013545
    431984 5ybi:B (2.268) BS11 MG 7.4.2.8 GO:0005524 ... P0A1C1 30013545
    431985 5ybl:A (2.108) BS01 MN 1.14.11.- GO:0005575 ... Q5AR34 29317628
    431986 5ybl:A (2.108) BS02 AKG 1.14.11.- GO:0005575 ... Q5AR34 29317628
    431987 5ybl:B (2.108) BS01 MN 1.14.11.- GO:0005575 ... Q5AR34 29317628
    431988 5ybl:C (2.108) BS01 MN 1.14.11.- GO:0005575 ... Q5AR34 29317628
    431989 5ybl:C (2.108) BS02 AKG 1.14.11.- GO:0005575 ... Q5AR34 29317628
    431990 5ybl:D (2.108) BS01 MN 1.14.11.- GO:0005575 ... Q5AR34 29317628
    431991 5ybn:A (2.104) BS01 FE 1.14.11.- GO:0016114 ... A0A1E1FFL0 29317628
    431992 5ybn:A (2.104) BS02 AKG 1.14.11.- GO:0016114 ... A0A1E1FFL0 29317628
    431993 5ybn:B (2.104) BS01 FE 1.14.11.- GO:0016114 ... A0A1E1FFL0 29317628
    431994 5ybn:B (2.104) BS02 AKG 1.14.11.- GO:0016114 ... A0A1E1FFL0 29317628
    431995 5ybo:A (2.204) BS01 FE 1.14.11.- GO:0016114 ... A0A1E1FFL0 29317628
    431996 5ybo:A (2.204) BS02 AKG 1.14.11.- GO:0016114 ... A0A1E1FFL0 29317628
    431997 5ybo:B (2.204) BS01 FE 1.14.11.- GO:0016114 ... A0A1E1FFL0 29317628
    431998 5ybo:B (2.204) BS02 AKG 1.14.11.- GO:0016114 ... A0A1E1FFL0 29317628
    431999 5ybo:B (2.204) BS03 8SX 1.14.11.- GO:0016114 ... A0A1E1FFL0 29317628
    432000 5ybp:A (2.312) BS01 FE 1.14.11.- GO:0016114 ... A0A1E1FFL0 29317628

    Reference:
  • Chengxin Zhang, Xi Zhang, Lydia Freddolino, and Yang Zhang. BioLiP2: an updated structure database for biologically relevent ligand-protein interactions, Nucleic Acids Research, gkad630 (2023).
  • Jianyi Yang, Ambrish Roy, and Yang Zhang. BioLiP: a semi-manually curated database for biologically relevant ligand-protein interactions, Nucleic Acids Research, 41: D1096-D1103 (2013) (download the PDF file).