SEQ2FUN

BioLiP
Download all results in tab-seperated text for 942758 receptor-ligand interactions, whose format is explained at readme.txt.
  • Hover over PDB to view the title of the structure. Click PDB to view the structure at the RCSB PDB database. Resolution -1.00 means the resolution is unavailable, e.g., for NMR structures.
  • Click Site # to view the binding site structure. Hover over Site # to view the binding residues.
  • Hover over Ligand to view the full ligand name. Click Ligand to view the 2D diagram and other detail information of the ligand.
  • Hover over EC number to view the full name of enzymatic activity.
  • Hover over GO terms to view all GO terms.
  • Hover over UniProt to view the protein name.
  • Sort results by
    << < 2152 2153 2154 2155 2156 2157 2158 2159 2160 2161 2162 2163 2164 2165 2166 2167 2168 2169 2170 2171 2172 > >>
    Go to page

    # PDB
    (Resolution Å)
    Site # Ligand EC number GO terms UniProt PubMed Binding
    affinity
    432201 5yeg:B (2.0) BS04 ZN ? N/A P49711 29076501
    432202 5yeg:B (2.0) BS05 ZN ? N/A P49711 29076501
    432203 5yeg:B (2.0) BS06 ZN ? N/A P49711 29076501
    432204 5yeg:B (2.0) BS07 ZN ? N/A P49711 29076501
    432205 5yeh:A (2.328) BS01 dna ? N/A P49711 29076501
    432206 5yeh:A (2.328) BS02 dna ? N/A P49711 29076501
    432207 5yeh:A (2.328) BS03 dna ? N/A P49711 29076501
    432208 5yeh:A (2.328) BS04 ZN ? N/A P49711 29076501
    432209 5yeh:A (2.328) BS05 ZN ? N/A P49711 29076501
    432210 5yeh:A (2.328) BS06 ZN ? N/A P49711 29076501
    432211 5yeh:A (2.328) BS07 ZN ? N/A P49711 29076501
    432212 5yeh:A (2.328) BS08 ZN ? N/A P49711 29076501
    432213 5yeh:B (2.328) BS01 dna ? N/A P49711 29076501
    432214 5yeh:B (2.328) BS02 dna ? N/A P49711 29076501
    432215 5yeh:B (2.328) BS03 ZN ? N/A P49711 29076501
    432216 5yeh:B (2.328) BS04 ZN ? N/A P49711 29076501
    432217 5yeh:B (2.328) BS05 ZN ? N/A P49711 29076501
    432218 5yeh:B (2.328) BS06 ZN ? N/A P49711 29076501
    432219 5yeh:B (2.328) BS07 ZN ? N/A P49711 29076501
    432220 5yei:A (2.301) BS01 THR 2.7.2.4 GO:0004072 ... O69077 29382741
    432221 5yei:A (2.301) BS02 LYS 2.7.2.4 GO:0004072 ... O69077 29382741
    432222 5yei:A (2.301) BS03 THR 2.7.2.4 GO:0004072 ... O69077 29382741
    432223 5yei:B (2.301) BS01 THR 2.7.2.4 N/A O69077 29382741
    432224 5yei:B (2.301) BS02 LYS 2.7.2.4 N/A O69077 29382741
    432225 5yei:B (2.301) BS03 THR 2.7.2.4 N/A O69077 29382741
    432226 5yei:C (2.301) BS01 THR 2.7.2.4 GO:0004072 ... O69077 29382741
    432227 5yei:C (2.301) BS02 THR 2.7.2.4 GO:0004072 ... O69077 29382741
    432228 5yei:C (2.301) BS03 LYS 2.7.2.4 GO:0004072 ... O69077 29382741
    432229 5yei:D (2.301) BS01 THR 2.7.2.4 N/A O69077 29382741
    432230 5yei:D (2.301) BS02 THR 2.7.2.4 N/A O69077 29382741
    432231 5yei:D (2.301) BS03 LYS 2.7.2.4 N/A O69077 29382741
    432232 5yei:E (2.301) BS01 THR 2.7.2.4 GO:0004072 ... O69077 29382741
    432233 5yei:E (2.301) BS02 THR 2.7.2.4 GO:0004072 ... O69077 29382741
    432234 5yei:E (2.301) BS03 LYS 2.7.2.4 GO:0004072 ... O69077 29382741
    432235 5yei:F (2.301) BS01 THR 2.7.2.4 N/A O69077 29382741
    432236 5yei:F (2.301) BS02 THR 2.7.2.4 N/A O69077 29382741
    432237 5yei:F (2.301) BS03 LYS 2.7.2.4 N/A O69077 29382741
    432238 5yei:G (2.301) BS01 THR 2.7.2.4 GO:0004072 ... O69077 29382741
    432239 5yei:G (2.301) BS02 LYS 2.7.2.4 GO:0004072 ... O69077 29382741
    432240 5yei:G (2.301) BS03 THR 2.7.2.4 GO:0004072 ... O69077 29382741
    432241 5yei:H (2.301) BS01 THR 2.7.2.4 N/A O69077 29382741
    432242 5yei:H (2.301) BS02 LYS 2.7.2.4 N/A O69077 29382741
    432243 5yei:H (2.301) BS03 THR 2.7.2.4 N/A O69077 29382741
    432244 5yej:A (2.698) BS01 dna ? GO:0000976 ... A0QX69 29852200
    432245 5yej:B (2.698) BS01 dna ? GO:0000976 ... A0QX69 29852200
    432246 5yej:B (2.698) BS02 dna ? GO:0000976 ... A0QX69 29852200
    432247 5yej:C (2.698) BS01 dna ? GO:0000976 ... A0QX69 29852200
    432248 5yej:C (2.698) BS02 dna ? GO:0000976 ... A0QX69 29852200
    432249 5yel:A (2.96) BS01 dna ? N/A P49711 29076501
    432250 5yel:A (2.96) BS02 dna ? N/A P49711 29076501
    432251 5yel:A (2.96) BS03 ZN ? N/A P49711 29076501
    432252 5yel:A (2.96) BS04 ZN ? N/A P49711 29076501
    432253 5yel:A (2.96) BS05 ZN ? N/A P49711 29076501
    432254 5yel:A (2.96) BS06 ZN ? N/A P49711 29076501
    432255 5yel:A (2.96) BS07 ZN ? N/A P49711 29076501
    432256 5yel:A (2.96) BS08 ZN ? N/A P49711 29076501
    432257 5yel:B (2.96) BS01 dna ? N/A P49711 29076501
    432258 5yel:B (2.96) BS02 dna ? N/A P49711 29076501
    432259 5yel:B (2.96) BS03 ZN ? N/A P49711 29076501
    432260 5yel:B (2.96) BS04 ZN ? N/A P49711 29076501
    432261 5yel:B (2.96) BS05 ZN ? N/A P49711 29076501
    432262 5yel:B (2.96) BS06 ZN ? N/A P49711 29076501
    432263 5yel:B (2.96) BS07 ZN ? N/A P49711 29076501
    432264 5yel:B (2.96) BS08 ZN ? N/A P49711 29076501
    432265 5yem:A (1.49) BS01 CA 1.11.1.6 GO:0004096 ... M4GGR5 38265876
    432266 5yem:A (1.49) BS02 CA 1.11.1.6 GO:0004096 ... M4GGR5 38265876
    432267 5yem:A (1.49) BS03 HEM 1.11.1.6 GO:0004096 ... M4GGR5 38265876
    432268 5yem:B (1.49) BS01 CA 1.11.1.6 GO:0004096 ... M4GGR5 38265876
    432269 5yem:B (1.49) BS02 CA 1.11.1.6 GO:0004096 ... M4GGR5 38265876
    432270 5yem:B (1.49) BS03 CA 1.11.1.6 GO:0004096 ... M4GGR5 38265876
    432271 5yem:B (1.49) BS04 HEM 1.11.1.6 GO:0004096 ... M4GGR5 38265876
    432272 5yem:C (1.49) BS01 CA 1.11.1.6 GO:0004096 ... M4GGR5 38265876
    432273 5yem:C (1.49) BS02 CA 1.11.1.6 GO:0004096 ... M4GGR5 38265876
    432274 5yem:C (1.49) BS03 HEM 1.11.1.6 GO:0004096 ... M4GGR5 38265876
    432275 5yem:D (1.49) BS01 CA 1.11.1.6 GO:0004096 ... M4GGR5 38265876
    432276 5yem:D (1.49) BS02 HEM 1.11.1.6 GO:0004096 ... M4GGR5 38265876
    432277 5yeq:B (1.75) BS01 MG 1.1.1.86 GO:0000287 ... Q4J8K9 29739976
    432278 5yeu:A (3.001) BS01 MG ? N/A Q5UQV1 30428313
    432279 5yeu:B (3.001) BS01 MG ? N/A Q5UQV1 30428313
    432280 5yew:A (3.2) BS01 GDP 3.6.5.- GO:0003924 ... Q8IWA4 29483649
    432281 5yew:A (3.2) BS02 BEF 3.6.5.- GO:0003924 ... Q8IWA4 29483649
    432282 5yew:A (3.2) BS03 K 3.6.5.- GO:0003924 ... Q8IWA4 29483649
    432283 5yew:A (3.2) BS04 MG 3.6.5.- GO:0003924 ... Q8IWA4 29483649
    432284 5yew:B (3.2) BS01 GDP 3.6.5.- GO:0003924 ... Q8IWA4 29483649
    432285 5yew:B (3.2) BS02 BEF 3.6.5.- GO:0003924 ... Q8IWA4 29483649
    432286 5yew:B (3.2) BS03 K 3.6.5.- GO:0003924 ... Q8IWA4 29483649
    432287 5yew:B (3.2) BS04 MG 3.6.5.- GO:0003924 ... Q8IWA4 29483649
    432288 5yew:C (3.2) BS01 GDP 3.6.5.- GO:0003924 ... Q8IWA4 29483649
    432289 5yew:C (3.2) BS02 BEF 3.6.5.- GO:0003924 ... Q8IWA4 29483649
    432290 5yew:C (3.2) BS03 K 3.6.5.- GO:0003924 ... Q8IWA4 29483649
    432291 5yew:C (3.2) BS04 MG 3.6.5.- GO:0003924 ... Q8IWA4 29483649
    432292 5yf0:A (2.25) BS01 SAM 2.1.1.22 GO:0008757 ... Q8N4J0 29463897
    432293 5yf0:B (2.25) BS01 SAM 2.1.1.22 GO:0008757 ... Q8N4J0 29463897
    432294 5yf0:B (2.25) BS02 CA 2.1.1.22 GO:0008757 ... Q8N4J0 29463897
    432295 5yf1:A (2.399) BS01 SFG 2.1.1.22 GO:0008757 ... Q8N4J0 29463897
    432296 5yf1:A (2.399) BS02 8V0 2.1.1.22 GO:0008757 ... Q8N4J0 29463897 MOAD: Kd=0.52mM
    432297 5yf1:B (2.399) BS01 SFG 2.1.1.22 GO:0008757 ... Q8N4J0 29463897
    432298 5yf1:B (2.399) BS02 8V0 2.1.1.22 GO:0008757 ... Q8N4J0 29463897 MOAD: Kd=0.52mM
    432299 5yf1:B (2.399) BS03 CA 2.1.1.22 GO:0008757 ... Q8N4J0 29463897
    432300 5yf2:A (2.802) BS01 SAH 2.1.1.22 GO:0008757 ... Q8N4J0 29463897
    432301 5yf2:A (2.802) BS02 8V3 2.1.1.22 GO:0008757 ... Q8N4J0 29463897
    432302 5yf2:B (2.802) BS01 SAH 2.1.1.22 GO:0008757 ... Q8N4J0 29463897
    432303 5yf2:B (2.802) BS02 8V3 2.1.1.22 GO:0008757 ... Q8N4J0 29463897
    432304 5yf4:A (1.897) BS01 peptide ? N/A Q9Y3A3 30072378
    432305 5yf4:A (1.897) BS02 ZN ? N/A Q9Y3A3 30072378
    432306 5yf4:A (1.897) BS03 ZN ? N/A Q9Y3A3 30072378
    432307 5yf9:B (1.89) BS01 NIO 2.7.11.1 GO:0000785 ... P19784 29717996
    432308 5yf9:X (1.89) BS01 NIO 2.7.11.1 GO:0000785 ... P19784 29717996
    432309 5yfb:A (2.2) BS01 ZN 3.4.14.4 GO:0004177 ... B0S4Q0 29050944
    432310 5yfb:B (2.2) BS01 ZN 3.4.14.4 GO:0004177 ... B0S4Q0 29050944
    432311 5yfd:A (1.76) BS01 CU 3.4.14.4 GO:0004177 ... B0S4Q0 29050944
    432312 5yfd:B (1.76) BS01 CU 3.4.14.4 GO:0004177 ... B0S4Q0 29050944
    432313 5yfi:H (1.848) BS01 ZN N/A N/A N/A 30510193
    432314 5yfi:L (1.848) BS01 ZN N/A N/A N/A 30510193
    432315 5yfj:A (2.2) BS01 RUB 5.3.1.29 GO:0016853 ... O57947 29382938
    432316 5yfj:B (2.2) BS01 RUB 5.3.1.29 GO:0016853 ... O57947 29382938
    432317 5yfj:C (2.2) BS01 RUB 5.3.1.29 GO:0016853 ... O57947 29382938
    432318 5yfm:A (2.4) BS01 NAP 1.1.1.42 GO:0000287 ... O75874 N/A
    432319 5yfm:A (2.4) BS02 MG 1.1.1.42 GO:0000287 ... O75874 N/A
    432320 5yfm:B (2.4) BS01 NAP 1.1.1.42 GO:0000287 ... O75874 N/A
    432321 5yfm:B (2.4) BS02 MG 1.1.1.42 GO:0000287 ... O75874 N/A
    432322 5yfm:C (2.4) BS01 NAP 1.1.1.42 GO:0000287 ... O75874 N/A
    432323 5yfm:C (2.4) BS02 MG 1.1.1.42 GO:0000287 ... O75874 N/A
    432324 5yfn:A (2.5) BS01 MG 1.1.1.42 GO:0000287 ... O75874 N/A
    432325 5yfs:A (2.3) BS01 RI2 5.3.1.29 GO:0016853 ... O57947 29382938 MOAD: Kd=13.8uM
    432326 5yfs:B (2.3) BS01 RI2 5.3.1.29 GO:0016853 ... O57947 29382938 MOAD: Kd=13.8uM
    432327 5yfs:C (2.3) BS01 RI2 5.3.1.29 GO:0016853 ... O57947 29382938 MOAD: Kd=13.8uM
    432328 5yft:A (2.21) BS01 RI2 5.3.1.29 GO:0016853 ... O57947 29382938 MOAD: Kd=10uM
    432329 5yft:B (2.21) BS01 RI2 5.3.1.29 GO:0016853 ... O57947 29382938 MOAD: Kd=10uM
    432330 5yft:C (2.21) BS01 RI2 5.3.1.29 GO:0016853 ... O57947 29382938 MOAD: Kd=10uM
    432331 5yfu:A (2.35) BS01 RUB 5.3.1.29 GO:0016853 ... O57947 29382938
    432332 5yfu:A (2.35) BS02 AMP 5.3.1.29 GO:0016853 ... O57947 29382938
    432333 5yfu:A (2.35) BS03 AMP 5.3.1.29 GO:0016853 ... O57947 29382938
    432334 5yfu:B (2.35) BS01 AMP 5.3.1.29 GO:0016853 ... O57947 29382938
    432335 5yfu:B (2.35) BS02 RUB 5.3.1.29 GO:0016853 ... O57947 29382938
    432336 5yfu:B (2.35) BS03 AMP 5.3.1.29 GO:0016853 ... O57947 29382938
    432337 5yfu:C (2.35) BS01 AMP 5.3.1.29 GO:0016853 ... O57947 29382938
    432338 5yfu:C (2.35) BS02 RUB 5.3.1.29 GO:0016853 ... O57947 29382938
    432339 5yfu:C (2.35) BS03 AMP 5.3.1.29 GO:0016853 ... O57947 29382938
    432340 5yfv:A (2.75) BS01 RI2 5.3.1.29 GO:0016853 ... O57947 29382938
    432341 5yfv:A (2.75) BS02 AMP 5.3.1.29 GO:0016853 ... O57947 29382938
    432342 5yfv:A (2.75) BS03 AMP 5.3.1.29 GO:0016853 ... O57947 29382938
    432343 5yfv:B (2.75) BS01 AMP 5.3.1.29 GO:0016853 ... O57947 29382938
    432344 5yfv:B (2.75) BS02 RI2 5.3.1.29 GO:0016853 ... O57947 29382938
    432345 5yfv:B (2.75) BS03 AMP 5.3.1.29 GO:0016853 ... O57947 29382938
    432346 5yfv:C (2.75) BS01 AMP 5.3.1.29 GO:0016853 ... O57947 29382938
    432347 5yfv:C (2.75) BS02 RI2 5.3.1.29 GO:0016853 ... O57947 29382938
    432348 5yfv:C (2.75) BS03 AMP 5.3.1.29 GO:0016853 ... O57947 29382938
    432349 5yfw:A (2.35) BS01 RI2 5.3.1.29 GO:0016853 ... O57947 29382938 MOAD: Kd=10uM
    432350 5yfw:A (2.35) BS02 AMP 5.3.1.29 GO:0016853 ... O57947 29382938
    432351 5yfw:A (2.35) BS03 AMP 5.3.1.29 GO:0016853 ... O57947 29382938
    432352 5yfw:B (2.35) BS01 AMP 5.3.1.29 GO:0016853 ... O57947 29382938
    432353 5yfw:B (2.35) BS02 RI2 5.3.1.29 GO:0016853 ... O57947 29382938 MOAD: Kd=10uM
    432354 5yfw:B (2.35) BS03 AMP 5.3.1.29 GO:0016853 ... O57947 29382938
    432355 5yfw:C (2.35) BS01 AMP 5.3.1.29 GO:0016853 ... O57947 29382938
    432356 5yfw:C (2.35) BS02 RI2 5.3.1.29 GO:0016853 ... O57947 29382938 MOAD: Kd=10uM
    432357 5yfw:C (2.35) BS03 AMP 5.3.1.29 GO:0016853 ... O57947 29382938
    432358 5yfx:A (2.7) BS01 RI2 5.3.1.29 GO:0016853 ... O57947 29382938
    432359 5yfx:A (2.7) BS02 AMP 5.3.1.29 GO:0016853 ... O57947 29382938
    432360 5yfy:A (2.3) BS01 PLG 2.1.2.1 GO:0004372 ... A5K8L9 N/A
    432361 5yfy:A (2.3) BS02 8UL 2.1.2.1 GO:0004372 ... A5K8L9 N/A
    432362 5yfy:A (2.3) BS03 PLG 2.1.2.1 GO:0004372 ... A5K8L9 N/A
    432363 5yfy:A (2.3) BS04 8UL 2.1.2.1 GO:0004372 ... A5K8L9 N/A
    432364 5yfy:B (2.3) BS01 PLG 2.1.2.1 GO:0004372 ... A5K8L9 N/A
    432365 5yfy:B (2.3) BS02 8UL 2.1.2.1 GO:0004372 ... A5K8L9 N/A
    432366 5yfy:B (2.3) BS03 PLG 2.1.2.1 GO:0004372 ... A5K8L9 N/A
    432367 5yfy:B (2.3) BS04 8UL 2.1.2.1 GO:0004372 ... A5K8L9 N/A
    432368 5yfy:C (2.3) BS01 PLG 2.1.2.1 GO:0004372 ... A5K8L9 N/A
    432369 5yfy:C (2.3) BS02 8UL 2.1.2.1 GO:0004372 ... A5K8L9 N/A
    432370 5yfz:A (2.16) BS01 PLG 2.1.2.1 GO:0004372 ... A0A1G4H5I1 29655285
    432371 5yfz:A (2.16) BS02 8UO 2.1.2.1 GO:0004372 ... A0A1G4H5I1 29655285
    432372 5yfz:A (2.16) BS03 8UO 2.1.2.1 GO:0004372 ... A0A1G4H5I1 29655285
    432373 5yfz:B (2.16) BS01 8UO 2.1.2.1 GO:0004372 ... A0A1G4H5I1 29655285
    432374 5yfz:B (2.16) BS02 PLG 2.1.2.1 GO:0004372 ... A0A1G4H5I1 29655285
    432375 5yfz:B (2.16) BS03 8UO 2.1.2.1 GO:0004372 ... A0A1G4H5I1 29655285
    432376 5yfz:C (2.16) BS01 PLG 2.1.2.1 GO:0004372 ... A0A1G4H5I1 29655285
    432377 5yfz:C (2.16) BS02 8UO 2.1.2.1 GO:0004372 ... A0A1G4H5I1 29655285
    432378 5yg0:A (2.33) BS01 PLG 2.1.2.1 GO:0004372 ... A5K8L9 N/A
    432379 5yg0:A (2.33) BS02 8UR 2.1.2.1 GO:0004372 ... A5K8L9 N/A
    432380 5yg0:A (2.33) BS03 PLG 2.1.2.1 GO:0004372 ... A5K8L9 N/A
    432381 5yg0:A (2.33) BS04 8UR 2.1.2.1 GO:0004372 ... A5K8L9 N/A
    432382 5yg0:B (2.33) BS01 PLG 2.1.2.1 GO:0004372 ... A5K8L9 N/A
    432383 5yg0:B (2.33) BS02 8UR 2.1.2.1 GO:0004372 ... A5K8L9 N/A
    432384 5yg0:B (2.33) BS03 PLG 2.1.2.1 GO:0004372 ... A5K8L9 N/A
    432385 5yg0:B (2.33) BS04 8UR 2.1.2.1 GO:0004372 ... A5K8L9 N/A
    432386 5yg0:C (2.33) BS01 PLG 2.1.2.1 GO:0004372 ... A5K8L9 N/A
    432387 5yg0:C (2.33) BS02 8UR 2.1.2.1 GO:0004372 ... A5K8L9 N/A
    432388 5yg1:A (2.45) BS01 PLG 2.1.2.1 GO:0004372 ... A5K8L9 N/A
    432389 5yg1:A (2.45) BS02 8UU 2.1.2.1 GO:0004372 ... A5K8L9 N/A
    432390 5yg1:A (2.45) BS03 PLG 2.1.2.1 GO:0004372 ... A5K8L9 N/A
    432391 5yg1:A (2.45) BS04 8UU 2.1.2.1 GO:0004372 ... A5K8L9 N/A
    432392 5yg1:B (2.45) BS01 PLG 2.1.2.1 GO:0004372 ... A5K8L9 N/A
    432393 5yg1:B (2.45) BS02 8UU 2.1.2.1 GO:0004372 ... A5K8L9 N/A
    432394 5yg1:B (2.45) BS03 PLG 2.1.2.1 GO:0004372 ... A5K8L9 N/A
    432395 5yg1:B (2.45) BS04 8UU 2.1.2.1 GO:0004372 ... A5K8L9 N/A
    432396 5yg1:C (2.45) BS01 PLG 2.1.2.1 GO:0004372 ... A5K8L9 N/A
    432397 5yg1:C (2.45) BS02 8UU 2.1.2.1 GO:0004372 ... A5K8L9 N/A
    432398 5yg2:A (2.2) BS01 PLG 2.1.2.1 GO:0004372 ... A0A1G4H5I1 29655285
    432399 5yg2:A (2.2) BS02 N05 2.1.2.1 GO:0004372 ... A0A1G4H5I1 29655285
    432400 5yg2:A (2.2) BS03 N05 2.1.2.1 GO:0004372 ... A0A1G4H5I1 29655285

    Reference:
  • Chengxin Zhang, Xi Zhang, Lydia Freddolino, and Yang Zhang. BioLiP2: an updated structure database for biologically relevent ligand-protein interactions, Nucleic Acids Research, gkad630 (2023).
  • Jianyi Yang, Ambrish Roy, and Yang Zhang. BioLiP: a semi-manually curated database for biologically relevant ligand-protein interactions, Nucleic Acids Research, 41: D1096-D1103 (2013) (download the PDF file).