SEQ2FUN

BioLiP
Download all results in tab-seperated text for 942758 receptor-ligand interactions, whose format is explained at readme.txt.
  • Hover over PDB to view the title of the structure. Click PDB to view the structure at the RCSB PDB database. Resolution -1.00 means the resolution is unavailable, e.g., for NMR structures.
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  • Hover over Ligand to view the full ligand name. Click Ligand to view the 2D diagram and other detail information of the ligand.
  • Hover over EC number to view the full name of enzymatic activity.
  • Hover over GO terms to view all GO terms.
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    # PDB
    (Resolution Å)
    Site # Ligand EC number GO terms UniProt PubMed Binding
    affinity
    432601 5yhw:A (2.7) BS04 DGT ? N/A I3LG77 31152619
    432602 5yhw:A (2.7) BS05 DGT ? N/A I3LG77 31152619
    432603 5yhw:A (2.7) BS06 DGT ? N/A I3LG77 31152619
    432604 5yhw:B (2.7) BS01 DGT ? N/A I3LG77 31152619
    432605 5yhw:B (2.7) BS02 DGT ? N/A I3LG77 31152619
    432606 5yhw:B (2.7) BS03 DGT ? N/A I3LG77 31152619
    432607 5yhw:B (2.7) BS04 DGT ? N/A I3LG77 31152619
    432608 5yhw:B (2.7) BS05 DGT ? N/A I3LG77 31152619
    432609 5yhw:B (2.7) BS06 DGT ? N/A I3LG77 31152619
    432610 5yhw:C (2.7) BS01 DGT ? N/A I3LG77 31152619
    432611 5yhw:C (2.7) BS02 DGT ? N/A I3LG77 31152619
    432612 5yhw:C (2.7) BS03 DGT ? N/A I3LG77 31152619
    432613 5yhw:C (2.7) BS04 DGT ? N/A I3LG77 31152619
    432614 5yhw:C (2.7) BS05 DGT ? N/A I3LG77 31152619
    432615 5yhw:C (2.7) BS06 DGT ? N/A I3LG77 31152619
    432616 5yhw:D (2.7) BS01 DGT ? N/A I3LG77 31152619
    432617 5yhw:D (2.7) BS02 DGT ? N/A I3LG77 31152619
    432618 5yhw:D (2.7) BS03 DGT ? N/A I3LG77 31152619
    432619 5yhw:D (2.7) BS04 DGT ? N/A I3LG77 31152619
    432620 5yhw:D (2.7) BS05 MG ? N/A I3LG77 31152619
    432621 5yhw:D (2.7) BS06 DGT ? N/A I3LG77 31152619
    432622 5yhw:E (2.7) BS01 DGT ? N/A I3LG77 31152619
    432623 5yhw:E (2.7) BS02 DGT ? N/A I3LG77 31152619
    432624 5yhw:E (2.7) BS03 DGT ? N/A I3LG77 31152619
    432625 5yhw:E (2.7) BS04 DGT ? N/A I3LG77 31152619
    432626 5yhw:E (2.7) BS05 DGT ? N/A I3LG77 31152619
    432627 5yhw:E (2.7) BS06 DGT ? N/A I3LG77 31152619
    432628 5yhw:F (2.7) BS01 DGT ? N/A I3LG77 31152619
    432629 5yhw:F (2.7) BS02 DGT ? N/A I3LG77 31152619
    432630 5yhw:F (2.7) BS03 DGT ? N/A I3LG77 31152619
    432631 5yhw:F (2.7) BS04 DGT ? N/A I3LG77 31152619
    432632 5yhw:F (2.7) BS05 DGT ? N/A I3LG77 31152619
    432633 5yhw:F (2.7) BS06 DGT ? N/A I3LG77 31152619
    432634 5yhw:G (2.7) BS01 DGT ? N/A I3LG77 31152619
    432635 5yhw:G (2.7) BS02 DGT ? N/A I3LG77 31152619
    432636 5yhw:G (2.7) BS03 DGT ? N/A I3LG77 31152619
    432637 5yhw:G (2.7) BS04 DGT ? N/A I3LG77 31152619
    432638 5yhw:G (2.7) BS05 DGT ? N/A I3LG77 31152619
    432639 5yhw:G (2.7) BS06 MG ? N/A I3LG77 31152619
    432640 5yhw:G (2.7) BS07 DGT ? N/A I3LG77 31152619
    432641 5yhw:H (2.7) BS01 DGT ? N/A I3LG77 31152619
    432642 5yhw:H (2.7) BS02 DGT ? N/A I3LG77 31152619
    432643 5yhw:H (2.7) BS03 DGT ? N/A I3LG77 31152619
    432644 5yhw:H (2.7) BS04 DGT ? N/A I3LG77 31152619
    432645 5yhw:H (2.7) BS05 DGT ? N/A I3LG77 31152619
    432646 5yhw:H (2.7) BS06 DGT ? N/A I3LG77 31152619
    432647 5yhx:A (2.4) BS01 ZN ? GO:0003677 ... Q9CDU5 29229866
    432648 5yhx:A (2.4) BS02 ZN ? GO:0003677 ... Q9CDU5 29229866
    432649 5yhx:B (2.4) BS01 ZN ? GO:0003677 ... Q9CDU5 29229866
    432650 5yhx:B (2.4) BS02 ZN ? GO:0003677 ... Q9CDU5 29229866
    432651 5yhx:G (2.4) BS01 ZN ? GO:0003677 ... Q9CDU5 29229866
    432652 5yhx:G (2.4) BS02 ZN ? GO:0003677 ... Q9CDU5 29229866
    432653 5yhx:H (2.4) BS01 ZN ? GO:0003677 ... Q9CDU5 29229866
    432654 5yhx:H (2.4) BS02 ZN ? GO:0003677 ... Q9CDU5 29229866
    432655 5yhx:M (2.4) BS01 ZN ? GO:0003677 ... Q9CDU5 29229866
    432656 5yhx:M (2.4) BS02 ZN ? GO:0003677 ... Q9CDU5 29229866
    432657 5yhx:N (2.4) BS01 ZN ? GO:0003677 ... Q9CDU5 29229866
    432658 5yhx:N (2.4) BS02 ZN ? GO:0003677 ... Q9CDU5 29229866
    432659 5yhx:S (2.4) BS01 ZN ? GO:0003677 ... Q9CDU5 29229866
    432660 5yhx:S (2.4) BS02 ZN ? GO:0003677 ... Q9CDU5 29229866
    432661 5yhx:T (2.4) BS01 ZN ? GO:0003677 ... Q9CDU5 29229866
    432662 5yhx:T (2.4) BS02 ZN ? GO:0003677 ... Q9CDU5 29229866
    432663 5yhy:A (1.65) BS01 ZN ? GO:0003677 ... Q9CDU5 29229866
    432664 5yhz:A (1.9) BS01 ZN ? GO:0003677 ... Q9CDU5 29229866
    432665 5yhz:A (1.9) BS02 ZN ? GO:0003677 ... Q9CDU5 29229866
    432666 5yi0:A (2.3) BS01 ZN ? GO:0003677 ... Q9CDU5 29229866
    432667 5yi0:B (2.3) BS01 ZN ? GO:0003677 ... Q9CDU5 29229866
    432668 5yi0:C (2.3) BS01 ZN ? GO:0003677 ... Q9CDU5 29229866
    432669 5yi0:D (2.3) BS01 ZN ? GO:0003677 ... Q9CDU5 29229866
    432670 5yi2:A (2.6) BS01 dna ? GO:0003677 ... Q9CDU5 29229866
    432671 5yi2:A (2.6) BS02 dna ? GO:0003677 ... Q9CDU5 29229866
    432672 5yi2:A (2.6) BS03 dna ? GO:0003677 ... Q9CDU5 29229866
    432673 5yi2:A (2.6) BS04 ZN ? GO:0003677 ... Q9CDU5 29229866
    432674 5yi2:A (2.6) BS05 ZN ? GO:0003677 ... Q9CDU5 29229866
    432675 5yi2:B (2.6) BS01 dna ? GO:0003677 ... Q9CDU5 29229866
    432676 5yi2:B (2.6) BS02 dna ? GO:0003677 ... Q9CDU5 29229866
    432677 5yi2:B (2.6) BS03 ZN ? GO:0003677 ... Q9CDU5 29229866
    432678 5yi2:B (2.6) BS04 ZN ? GO:0003677 ... Q9CDU5 29229866
    432679 5yi2:E (2.6) BS01 dna ? GO:0003677 ... Q9CDU5 29229866
    432680 5yi2:E (2.6) BS02 dna ? GO:0003677 ... Q9CDU5 29229866
    432681 5yi2:E (2.6) BS03 dna ? GO:0003677 ... Q9CDU5 29229866
    432682 5yi2:E (2.6) BS04 ZN ? GO:0003677 ... Q9CDU5 29229866
    432683 5yi2:E (2.6) BS05 ZN ? GO:0003677 ... Q9CDU5 29229866
    432684 5yi2:F (2.6) BS01 dna ? GO:0003677 ... Q9CDU5 29229866
    432685 5yi2:F (2.6) BS02 dna ? GO:0003677 ... Q9CDU5 29229866
    432686 5yi2:F (2.6) BS03 ZN ? GO:0003677 ... Q9CDU5 29229866
    432687 5yi2:F (2.6) BS04 ZN ? GO:0003677 ... Q9CDU5 29229866
    432688 5yi2:I (2.6) BS01 dna ? GO:0003677 ... Q9CDU5 29229866
    432689 5yi2:I (2.6) BS02 dna ? GO:0003677 ... Q9CDU5 29229866
    432690 5yi2:I (2.6) BS03 ZN ? GO:0003677 ... Q9CDU5 29229866
    432691 5yi2:I (2.6) BS04 ZN ? GO:0003677 ... Q9CDU5 29229866
    432692 5yi2:J (2.6) BS01 dna ? GO:0003677 ... Q9CDU5 29229866
    432693 5yi2:J (2.6) BS02 dna ? GO:0003677 ... Q9CDU5 29229866
    432694 5yi2:J (2.6) BS03 dna ? GO:0003677 ... Q9CDU5 29229866
    432695 5yi2:J (2.6) BS04 dna ? GO:0003677 ... Q9CDU5 29229866
    432696 5yi2:J (2.6) BS05 ZN ? GO:0003677 ... Q9CDU5 29229866
    432697 5yi2:J (2.6) BS06 ZN ? GO:0003677 ... Q9CDU5 29229866
    432698 5yi2:M (2.6) BS01 dna ? GO:0003677 ... Q9CDU5 29229866
    432699 5yi2:M (2.6) BS02 dna ? GO:0003677 ... Q9CDU5 29229866
    432700 5yi2:M (2.6) BS03 ZN ? GO:0003677 ... Q9CDU5 29229866
    432701 5yi2:M (2.6) BS04 ZN ? GO:0003677 ... Q9CDU5 29229866
    432702 5yi2:N (2.6) BS01 dna ? GO:0003677 ... Q9CDU5 29229866
    432703 5yi2:N (2.6) BS02 dna ? GO:0003677 ... Q9CDU5 29229866
    432704 5yi2:N (2.6) BS03 ZN ? GO:0003677 ... Q9CDU5 29229866
    432705 5yi2:N (2.6) BS04 ZN ? GO:0003677 ... Q9CDU5 29229866
    432706 5yi3:A (2.9) BS01 dna ? GO:0003677 ... Q9CDU5 29229866
    432707 5yi3:A (2.9) BS02 dna ? GO:0003677 ... Q9CDU5 29229866
    432708 5yi3:A (2.9) BS03 dna ? GO:0003677 ... Q9CDU5 29229866
    432709 5yi3:A (2.9) BS04 ZN ? GO:0003677 ... Q9CDU5 29229866
    432710 5yi3:B (2.9) BS01 dna ? GO:0003677 ... Q9CDU5 29229866
    432711 5yi3:B (2.9) BS02 dna ? GO:0003677 ... Q9CDU5 29229866
    432712 5yi3:B (2.9) BS03 ZN ? GO:0003677 ... Q9CDU5 29229866
    432713 5yi3:E (2.9) BS01 dna ? GO:0003677 ... Q9CDU5 29229866
    432714 5yi3:E (2.9) BS02 dna ? GO:0003677 ... Q9CDU5 29229866
    432715 5yi3:E (2.9) BS03 dna ? GO:0003677 ... Q9CDU5 29229866
    432716 5yi3:E (2.9) BS04 ZN ? GO:0003677 ... Q9CDU5 29229866
    432717 5yi3:F (2.9) BS01 dna ? GO:0003677 ... Q9CDU5 29229866
    432718 5yi3:F (2.9) BS02 dna ? GO:0003677 ... Q9CDU5 29229866
    432719 5yi3:F (2.9) BS03 ZN ? GO:0003677 ... Q9CDU5 29229866
    432720 5yi3:I (2.9) BS01 dna ? GO:0003677 ... Q9CDU5 29229866
    432721 5yi3:I (2.9) BS02 dna ? GO:0003677 ... Q9CDU5 29229866
    432722 5yi3:I (2.9) BS03 dna ? GO:0003677 ... Q9CDU5 29229866
    432723 5yi3:I (2.9) BS04 ZN ? GO:0003677 ... Q9CDU5 29229866
    432724 5yi3:J (2.9) BS01 dna ? GO:0003677 ... Q9CDU5 29229866
    432725 5yi3:J (2.9) BS02 dna ? GO:0003677 ... Q9CDU5 29229866
    432726 5yi3:J (2.9) BS03 ZN ? GO:0003677 ... Q9CDU5 29229866
    432727 5yi3:M (2.9) BS01 dna ? GO:0003677 ... Q9CDU5 29229866
    432728 5yi3:M (2.9) BS02 dna ? GO:0003677 ... Q9CDU5 29229866
    432729 5yi3:M (2.9) BS03 dna ? GO:0003677 ... Q9CDU5 29229866
    432730 5yi3:M (2.9) BS04 ZN ? GO:0003677 ... Q9CDU5 29229866
    432731 5yi3:N (2.9) BS01 dna ? GO:0003677 ... Q9CDU5 29229866
    432732 5yi3:N (2.9) BS02 dna ? GO:0003677 ... Q9CDU5 29229866
    432733 5yi3:N (2.9) BS03 ZN ? GO:0003677 ... Q9CDU5 29229866
    432734 5yi7:A (1.7) BS01 peptide ? N/A P16554 29467404
    432735 5yi7:C (1.7) BS01 peptide ? N/A P16554 29467404
    432736 5yi8:A (2.001) BS01 peptide ? N/A P16554 29467404
    432737 5yia:A (2.0) BS01 8V9 3.4.23.39 GO:0004190 ... Q8I6V3 29943906 MOAD: Ki=3nM
    432738 5yib:A (2.15) BS01 8VC 3.4.23.39 GO:0004190 ... Q8I6V3 29943906 MOAD: Ki=3.3nM
    432739 5yic:A (1.9) BS01 8VO 3.4.23.39 GO:0004190 ... Q8I6V3 29943906 MOAD: Ki=1.3nM
    432740 5yid:A (2.1) BS01 K95 3.4.23.39 GO:0004190 ... Q8I6V3 29943906 MOAD: Ki=4nM
    432741 5yie:A (2.1) BS01 8VF 3.4.23.39 GO:0004190 ... Q8I6V3 29943906 MOAD: Ki=5.6nM
    432742 5yif:A (2.45) BS01 8VR N/A GO:0004553 ... N/A 30104607
    432743 5yif:B (2.45) BS01 8VR N/A GO:0004553 ... N/A 30104607
    432744 5yig:A (2.8) BS01 54B N/A GO:0003677 ... N/A 30125722
    432745 5yig:B (2.8) BS01 54B N/A GO:0003677 ... N/A 30125722
    432746 5yij:A (3.18) BS01 NAI ? GO:0106274 ... Q6RCR0 29795342
    432747 5yip:A (1.85) BS01 peptide ? GO:0005515 ... Q8R3R8 29867141
    432748 5yiq:A (2.6) BS01 peptide ? GO:0000421 ... Q9CQV6 29867141
    432749 5yiq:A (2.6) BS02 ZN ? GO:0000421 ... Q9CQV6 29867141
    432750 5yiq:A (2.6) BS03 ZN ? GO:0000421 ... Q9CQV6 29867141
    432751 5yir:A (2.75) BS01 peptide ? GO:0000139 ... Q9DCD6 29867141
    432752 5yir:B (2.75) BS01 peptide ? GO:0000139 ... Q9DCD6 29867141
    432753 5yir:D (2.75) BS01 peptide ? GO:0000139 ... Q9DCD6 29867141
    432754 5yis:A (2.201) BS01 peptide ? GO:0000421 ... Q9CQV6 29867141
    432755 5yis:B (2.201) BS01 peptide ? GO:0000421 ... Q9CQV6 29867141
    432756 5yis:B (2.201) BS02 peptide ? GO:0000421 ... Q9CQV6 29867141
    432757 5yiv:A (2.914) BS01 dna ? N/A A0A0H3C9J4 29514271
    432758 5yiv:A (2.914) BS02 dna ? N/A A0A0H3C9J4 29514271
    432759 5yiv:B (2.914) BS01 dna ? N/A A0A0H3C9J4 29514271
    432760 5yiv:B (2.914) BS02 dna ? N/A A0A0H3C9J4 29514271
    432761 5yiv:C (2.914) BS01 dna ? N/A A0A0H3C9J4 29514271
    432762 5yiv:C (2.914) BS02 dna ? N/A A0A0H3C9J4 29514271
    432763 5yiv:D (2.914) BS01 dna ? N/A A0A0H3C9J4 29514271
    432764 5yiv:D (2.914) BS02 dna ? N/A A0A0H3C9J4 29514271
    432765 5yiw:A (1.551) BS01 dna ? N/A A0A0H3C9J4 29514271
    432766 5yiw:A (1.551) BS02 dna ? N/A A0A0H3C9J4 29514271
    432767 5yiw:C (1.551) BS01 dna ? N/A A0A0H3C9J4 29514271
    432768 5yiw:C (1.551) BS02 dna ? N/A A0A0H3C9J4 29514271
    432769 5yix:A (2.302) BS01 BU3 ? GO:0003677 ... A0A0H3CAV3 29514271
    432770 5yix:B (2.302) BS01 BU3 ? N/A A0A0H3C9J4 29514271
    432771 5yix:B (2.302) BS02 ZN ? N/A A0A0H3C9J4 29514271
    432772 5yiz:A (2.0) BS01 EF2 ? N/A Q8C7D2 29358579
    432773 5yiz:A (2.0) BS02 ZN ? N/A Q8C7D2 29358579
    432774 5yiz:D (2.0) BS01 EF2 ? N/A Q8C7D2 29358579
    432775 5yiz:D (2.0) BS02 ZN ? N/A Q8C7D2 29358579
    432776 5yiz:G (2.0) BS01 EF2 ? N/A Q8C7D2 29358579
    432777 5yiz:G (2.0) BS02 ZN ? N/A Q8C7D2 29358579
    432778 5yiz:J (2.0) BS01 EF2 ? N/A Q8C7D2 29358579
    432779 5yiz:J (2.0) BS02 ZN ? N/A Q8C7D2 29358579
    432780 5yiz:M (2.0) BS01 EF2 ? N/A Q8C7D2 29358579
    432781 5yiz:M (2.0) BS02 ZN ? N/A Q8C7D2 29358579
    432782 5yiz:P (2.0) BS01 EF2 ? N/A Q8C7D2 29358579
    432783 5yiz:P (2.0) BS02 ZN ? N/A Q8C7D2 29358579
    432784 5yiz:S (2.0) BS01 EF2 ? N/A Q8C7D2 29358579
    432785 5yiz:S (2.0) BS02 ZN ? N/A Q8C7D2 29358579
    432786 5yiz:V (2.0) BS01 EF2 ? N/A Q8C7D2 29358579
    432787 5yiz:V (2.0) BS02 ZN ? N/A Q8C7D2 29358579
    432788 5yiz:Y (2.0) BS01 EF2 ? N/A Q8C7D2 29358579
    432789 5yiz:Y (2.0) BS02 ZN ? N/A Q8C7D2 29358579
    432790 5yiz:b (2.0) BS01 EF2 ? N/A Q8C7D2 29358579
    432791 5yiz:b (2.0) BS02 ZN ? N/A Q8C7D2 29358579
    432792 5yiz:e (2.0) BS01 EF2 ? N/A Q8C7D2 29358579
    432793 5yiz:e (2.0) BS02 ZN ? N/A Q8C7D2 29358579
    432794 5yiz:h (2.0) BS01 EF2 ? N/A Q8C7D2 29358579
    432795 5yiz:h (2.0) BS02 ZN ? N/A Q8C7D2 29358579
    432796 5yiz:k (2.0) BS01 EF2 ? N/A Q8C7D2 29358579
    432797 5yiz:k (2.0) BS02 ZN ? N/A Q8C7D2 29358579
    432798 5yiz:n (2.0) BS01 EF2 ? N/A Q8C7D2 29358579
    432799 5yiz:n (2.0) BS02 ZN ? N/A Q8C7D2 29358579
    432800 5yiz:q (2.0) BS01 EF2 ? N/A Q8C7D2 29358579

    Reference:
  • Chengxin Zhang, Xi Zhang, Lydia Freddolino, and Yang Zhang. BioLiP2: an updated structure database for biologically relevent ligand-protein interactions, Nucleic Acids Research, gkad630 (2023).
  • Jianyi Yang, Ambrish Roy, and Yang Zhang. BioLiP: a semi-manually curated database for biologically relevant ligand-protein interactions, Nucleic Acids Research, 41: D1096-D1103 (2013) (download the PDF file).