SEQ2FUN

BioLiP
Download all results in tab-seperated text for 942758 receptor-ligand interactions, whose format is explained at readme.txt.
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    # PDB
    (Resolution Å)
    Site # Ligand EC number GO terms UniProt PubMed Binding
    affinity
    432801 5yiz:q (2.0) BS02 ZN ? N/A Q8C7D2 29358579
    432802 5yiz:t (2.0) BS01 EF2 ? N/A Q8C7D2 29358579
    432803 5yiz:t (2.0) BS02 ZN ? N/A Q8C7D2 29358579
    432804 5yj0:A (1.8) BS01 EF2 ? N/A Q8C7D2 29358579 MOAD: Kd=5.7uM
    432805 5yj0:A (1.8) BS02 ZN ? N/A Q8C7D2 29358579
    432806 5yj0:D (1.8) BS01 EF2 ? N/A Q8C7D2 29358579 MOAD: Kd=5.7uM
    432807 5yj0:D (1.8) BS02 ZN ? N/A Q8C7D2 29358579
    432808 5yj0:G (1.8) BS01 EF2 ? N/A Q8C7D2 29358579 MOAD: Kd=5.7uM
    432809 5yj0:G (1.8) BS02 ZN ? N/A Q8C7D2 29358579
    432810 5yj0:J (1.8) BS01 EF2 ? N/A Q8C7D2 29358579 MOAD: Kd=5.7uM
    432811 5yj0:J (1.8) BS02 ZN ? N/A Q8C7D2 29358579
    432812 5yj0:M (1.8) BS01 EF2 ? N/A Q8C7D2 29358579 MOAD: Kd=5.7uM
    432813 5yj0:M (1.8) BS02 ZN ? N/A Q8C7D2 29358579
    432814 5yj0:P (1.8) BS01 EF2 ? N/A Q8C7D2 29358579 MOAD: Kd=5.7uM
    432815 5yj0:P (1.8) BS02 ZN ? N/A Q8C7D2 29358579
    432816 5yj0:S (1.8) BS01 EF2 ? N/A Q8C7D2 29358579 MOAD: Kd=5.7uM
    432817 5yj0:S (1.8) BS02 ZN ? N/A Q8C7D2 29358579
    432818 5yj0:V (1.8) BS01 EF2 ? N/A Q8C7D2 29358579 MOAD: Kd=5.7uM
    432819 5yj0:V (1.8) BS02 ZN ? N/A Q8C7D2 29358579
    432820 5yj0:Y (1.8) BS01 EF2 ? N/A Q8C7D2 29358579 MOAD: Kd=5.7uM
    432821 5yj0:Y (1.8) BS02 ZN ? N/A Q8C7D2 29358579
    432822 5yj0:b (1.8) BS01 EF2 ? N/A Q8C7D2 29358579
    432823 5yj0:b (1.8) BS02 ZN ? N/A Q8C7D2 29358579
    432824 5yj0:e (1.8) BS01 EF2 ? N/A Q8C7D2 29358579
    432825 5yj0:e (1.8) BS02 ZN ? N/A Q8C7D2 29358579
    432826 5yj0:h (1.8) BS01 EF2 ? N/A Q8C7D2 29358579
    432827 5yj0:h (1.8) BS02 ZN ? N/A Q8C7D2 29358579
    432828 5yj0:k (1.8) BS01 EF2 ? N/A Q8C7D2 29358579
    432829 5yj0:k (1.8) BS02 ZN ? N/A Q8C7D2 29358579
    432830 5yj0:n (1.8) BS01 EF2 ? N/A Q8C7D2 29358579
    432831 5yj0:n (1.8) BS02 ZN ? N/A Q8C7D2 29358579
    432832 5yj0:q (1.8) BS01 EF2 ? N/A Q8C7D2 29358579
    432833 5yj0:q (1.8) BS02 ZN ? N/A Q8C7D2 29358579
    432834 5yj0:t (1.8) BS01 EF2 ? N/A Q8C7D2 29358579
    432835 5yj0:t (1.8) BS02 ZN ? N/A Q8C7D2 29358579
    432836 5yj1:A (2.0) BS01 6EL ? N/A Q8C7D2 29358579 MOAD: Kd=50.3uM
    432837 5yj1:A (2.0) BS02 ZN ? N/A Q8C7D2 29358579
    432838 5yj1:D (2.0) BS01 6EL ? N/A Q8C7D2 29358579 MOAD: Kd=50.3uM
    432839 5yj1:D (2.0) BS02 ZN ? N/A Q8C7D2 29358579
    432840 5yj1:G (2.0) BS01 6EL ? N/A Q8C7D2 29358579 MOAD: Kd=50.3uM
    432841 5yj1:G (2.0) BS02 ZN ? N/A Q8C7D2 29358579
    432842 5yj1:J (2.0) BS01 6EL ? N/A Q8C7D2 29358579 MOAD: Kd=50.3uM
    432843 5yj1:J (2.0) BS02 ZN ? N/A Q8C7D2 29358579
    432844 5yj1:M (2.0) BS01 6EL ? N/A Q8C7D2 29358579 MOAD: Kd=50.3uM
    432845 5yj1:M (2.0) BS02 ZN ? N/A Q8C7D2 29358579
    432846 5yj1:P (2.0) BS01 6EL ? N/A Q8C7D2 29358579 MOAD: Kd=50.3uM
    432847 5yj1:P (2.0) BS02 ZN ? N/A Q8C7D2 29358579
    432848 5yj1:S (2.0) BS01 6EL ? N/A Q8C7D2 29358579 MOAD: Kd=50.3uM
    432849 5yj1:S (2.0) BS02 ZN ? N/A Q8C7D2 29358579
    432850 5yj1:V (2.0) BS01 6EL ? N/A Q8C7D2 29358579 MOAD: Kd=50.3uM
    432851 5yj1:V (2.0) BS02 ZN ? N/A Q8C7D2 29358579
    432852 5yj1:Y (2.0) BS01 6EL ? N/A Q8C7D2 29358579 MOAD: Kd=50.3uM
    432853 5yj1:Y (2.0) BS02 ZN ? N/A Q8C7D2 29358579
    432854 5yj1:b (2.0) BS01 6EL ? N/A Q8C7D2 29358579
    432855 5yj1:b (2.0) BS02 ZN ? N/A Q8C7D2 29358579
    432856 5yj1:e (2.0) BS01 6EL ? N/A Q8C7D2 29358579
    432857 5yj1:e (2.0) BS02 ZN ? N/A Q8C7D2 29358579
    432858 5yj1:h (2.0) BS01 6EL ? N/A Q8C7D2 29358579
    432859 5yj1:h (2.0) BS02 ZN ? N/A Q8C7D2 29358579
    432860 5yj1:k (2.0) BS01 6EL ? N/A Q8C7D2 29358579
    432861 5yj1:k (2.0) BS02 ZN ? N/A Q8C7D2 29358579
    432862 5yj1:k (2.0) BS03 6EL ? N/A Q8C7D2 29358579
    432863 5yj1:n (2.0) BS01 6EL ? N/A Q8C7D2 29358579
    432864 5yj1:n (2.0) BS02 ZN ? N/A Q8C7D2 29358579
    432865 5yj1:q (2.0) BS01 6EL ? N/A Q8C7D2 29358579
    432866 5yj1:q (2.0) BS02 ZN ? N/A Q8C7D2 29358579
    432867 5yj1:t (2.0) BS01 6EL ? N/A Q8C7D2 29358579
    432868 5yj1:t (2.0) BS02 ZN ? N/A Q8C7D2 29358579
    432869 5yj2:A (1.71) BS01 AZA 1.7.3.3
    4.1.1.97
    GO:0004846 ... Q45697 N/A
    432870 5yj2:A (1.71) BS02 OXY 1.7.3.3
    4.1.1.97
    GO:0004846 ... Q45697 N/A
    432871 5yj2:A (1.71) BS03 MXE 1.7.3.3
    4.1.1.97
    GO:0004846 ... Q45697 N/A
    432872 5yj2:A (1.71) BS04 AZA 1.7.3.3
    4.1.1.97
    GO:0004846 ... Q45697 N/A
    432873 5yj2:B (1.71) BS01 AZA 1.7.3.3
    4.1.1.97
    GO:0004846 ... Q45697 N/A
    432874 5yj2:B (1.71) BS02 AZA 1.7.3.3
    4.1.1.97
    GO:0004846 ... Q45697 N/A
    432875 5yj2:B (1.71) BS03 OXY 1.7.3.3
    4.1.1.97
    GO:0004846 ... Q45697 N/A
    432876 5yj2:C (1.71) BS01 AZA 1.7.3.3
    4.1.1.97
    GO:0004846 ... Q45697 N/A
    432877 5yj2:C (1.71) BS02 OXY 1.7.3.3
    4.1.1.97
    GO:0004846 ... Q45697 N/A
    432878 5yj2:C (1.71) BS03 MXE 1.7.3.3
    4.1.1.97
    GO:0004846 ... Q45697 N/A
    432879 5yj2:C (1.71) BS04 AZA 1.7.3.3
    4.1.1.97
    GO:0004846 ... Q45697 N/A
    432880 5yj2:D (1.71) BS01 AZA 1.7.3.3
    4.1.1.97
    GO:0004846 ... Q45697 N/A
    432881 5yj2:D (1.71) BS02 AZA 1.7.3.3
    4.1.1.97
    GO:0004846 ... Q45697 N/A
    432882 5yj2:D (1.71) BS03 OXY 1.7.3.3
    4.1.1.97
    GO:0004846 ... Q45697 N/A
    432883 5yj3:C (2.845) BS01 dna ? N/A P10074 29134956
    432884 5yj3:C (2.845) BS02 dna ? N/A P10074 29134956
    432885 5yj3:C (2.845) BS03 ZN ? N/A P10074 29134956
    432886 5yj3:C (2.845) BS04 ZN ? N/A P10074 29134956
    432887 5yj3:D (2.845) BS01 dna ? N/A P10074 29134956
    432888 5yj3:D (2.845) BS02 dna ? N/A P10074 29134956
    432889 5yj3:D (2.845) BS03 ZN ? N/A P10074 29134956
    432890 5yj3:D (2.845) BS04 ZN ? N/A P10074 29134956
    432891 5yj6:A (1.43) BS01 33O ? GO:0004553 ... C7ED31 29344087
    432892 5yj7:C (1.61) BS01 CA 3.2.1.21 GO:0004553 ... A0A452CSM4 33347927
    432893 5yj8:A (1.762) BS01 8W9 ? N/A Q9H7E2 29645362 MOAD: Kd=0.104mM
    432894 5yj9:D (2.53) BS01 ANP 2.7.11.1 GO:0004672 ... D6WMX4 29991771
    432895 5yj9:D (2.53) BS02 MG 2.7.11.1 GO:0004672 ... D6WMX4 29991771
    432896 5yja:A (1.65) BS01 AZA 1.7.3.3
    4.1.1.97
    GO:0004846 ... Q45697 N/A
    432897 5yja:A (1.65) BS02 AZA 1.7.3.3
    4.1.1.97
    GO:0004846 ... Q45697 N/A
    432898 5yja:B (1.65) BS01 AZA 1.7.3.3
    4.1.1.97
    GO:0004846 ... Q45697 N/A
    432899 5yja:B (1.65) BS02 AZA 1.7.3.3
    4.1.1.97
    GO:0004846 ... Q45697 N/A
    432900 5yja:B (1.65) BS03 OXY 1.7.3.3
    4.1.1.97
    GO:0004846 ... Q45697 N/A
    432901 5yja:C (1.65) BS01 AZA 1.7.3.3
    4.1.1.97
    GO:0004846 ... Q45697 N/A
    432902 5yja:C (1.65) BS02 AZA 1.7.3.3
    4.1.1.97
    GO:0004846 ... Q45697 N/A
    432903 5yja:D (1.65) BS01 AZA 1.7.3.3
    4.1.1.97
    GO:0004846 ... Q45697 N/A
    432904 5yja:D (1.65) BS02 AZA 1.7.3.3
    4.1.1.97
    GO:0004846 ... Q45697 N/A
    432905 5yja:D (1.65) BS03 OXY 1.7.3.3
    4.1.1.97
    GO:0004846 ... Q45697 N/A
    432906 5yjb:A (2.96) BS01 FAD 1.14.99.66 GO:0005634 ... O60341 29949906
    432907 5yjb:A (2.96) BS02 8WC 1.14.99.66 GO:0005634 ... O60341 29949906 BindingDB: Ki=29nM
    432908 5yjf:A (2.49) BS01 SAH 2.1.1.1 GO:0005737 ... P40261 29483571 BindingDB: IC50=35300nM
    432909 5yjf:A (2.49) BS02 8WO 2.1.1.1 GO:0005737 ... P40261 29483571 MOAD: ic50=1.8uM
    432910 5yjf:B (2.49) BS01 SAH 2.1.1.1 GO:0005737 ... P40261 29483571 BindingDB: IC50=35300nM
    432911 5yjf:B (2.49) BS02 8WO 2.1.1.1 GO:0005737 ... P40261 29483571 MOAD: ic50=1.8uM
    432912 5yjf:C (2.49) BS01 SAH 2.1.1.1 GO:0005737 ... P40261 29483571 BindingDB: IC50=35300nM
    432913 5yjf:C (2.49) BS02 8WO 2.1.1.1 GO:0005737 ... P40261 29483571 MOAD: ic50=1.8uM
    432914 5yjf:D (2.49) BS01 SAH 2.1.1.1 GO:0005737 ... P40261 29483571 BindingDB: IC50=35300nM
    432915 5yjf:D (2.49) BS02 8WO 2.1.1.1 GO:0005737 ... P40261 29483571 MOAD: ic50=1.8uM
    432916 5yjg:A (2.399) BS01 CYS ? N/A Q15063 29754429
    432917 5yjg:A (2.399) BS02 CA ? N/A Q15063 29754429
    432918 5yjg:A (2.399) BS03 CA ? N/A Q15063 29754429
    432919 5yjg:A (2.399) BS04 CA ? N/A Q15063 29754429
    432920 5yjg:A (2.399) BS05 MG ? N/A Q15063 29754429
    432921 5yjg:A (2.399) BS06 MG ? N/A Q15063 29754429
    432922 5yjg:A (2.399) BS07 MG ? N/A Q15063 29754429
    432923 5yjg:A (2.399) BS08 MG ? N/A Q15063 29754429
    432924 5yjg:A (2.399) BS09 MG ? N/A Q15063 29754429
    432925 5yjg:A (2.399) BS10 MG ? N/A Q15063 29754429
    432926 5yjg:A (2.399) BS11 MG ? N/A Q15063 29754429
    432927 5yjh:A (2.957) BS01 MG ? N/A Q15063 29754429
    432928 5yjh:A (2.957) BS02 MG ? N/A Q15063 29754429
    432929 5yjh:A (2.957) BS03 MG ? N/A Q15063 29754429
    432930 5yjh:A (2.957) BS04 MG ? N/A Q15063 29754429
    432931 5yjh:A (2.957) BS05 MG ? N/A Q15063 29754429
    432932 5yjh:A (2.957) BS06 MG ? N/A Q15063 29754429
    432933 5yjh:A (2.957) BS07 MG ? N/A Q15063 29754429
    432934 5yjh:A (2.957) BS08 MG ? N/A Q15063 29754429
    432935 5yjh:A (2.957) BS09 MG ? N/A Q15063 29754429
    432936 5yji:A (1.99) BS01 SAH 2.1.1.1 GO:0005737 ... O55239 29483571
    432937 5yji:A (1.99) BS02 8WO 2.1.1.1 GO:0005737 ... O55239 29483571 MOAD: ic50=5uM
    432938 5yji:B (1.99) BS01 SAH 2.1.1.1 GO:0005737 ... O55239 29483571
    432939 5yji:B (1.99) BS02 8WO 2.1.1.1 GO:0005737 ... O55239 29483571 MOAD: ic50=5uM
    432940 5yjj:A (2.2) BS01 PO4 2.7.7.8 GO:0000175 ... Q8CST1 29242153
    432941 5yjj:A (2.2) BS02 MG 2.7.7.8 GO:0000175 ... Q8CST1 29242153
    432942 5yjj:B (2.2) BS01 PO4 2.7.7.8 GO:0000175 ... Q8CST1 29242153
    432943 5yjj:B (2.2) BS02 MG 2.7.7.8 GO:0000175 ... Q8CST1 29242153
    432944 5yjj:C (2.2) BS01 PO4 2.7.7.8 GO:0000175 ... Q8CST1 29242153
    432945 5yjj:C (2.2) BS02 MG 2.7.7.8 GO:0000175 ... Q8CST1 29242153
    432946 5yjj:D (2.2) BS01 PO4 2.7.7.8 GO:0000175 ... Q8CST1 29242153
    432947 5yjj:E (2.2) BS01 PO4 2.7.7.8 GO:0000175 ... Q8CST1 29242153
    432948 5yjj:E (2.2) BS02 MG 2.7.7.8 GO:0000175 ... Q8CST1 29242153
    432949 5yjj:F (2.2) BS01 PO4 2.7.7.8 GO:0000175 ... Q8CST1 29242153
    432950 5yjj:F (2.2) BS02 MG 2.7.7.8 GO:0000175 ... Q8CST1 29242153
    432951 5yjk:A (2.4) BS01 8VX 3.4.21.117 GO:0001533 ... P49862 29102227 MOAD: ic50=0.82uM
    BindingDB: IC50=820nM
    432952 5yjl:A (2.7) BS01 NAP 1.2.1.70 GO:0008883 ... P42804 29785497
    432953 5yjl:B (2.7) BS01 NAP 1.2.1.70 GO:0008883 ... P42804 29785497
    432954 5yjm:A (1.9) BS01 ZN 3.4.21.39 GO:0002003 ... P23946 29191554
    432955 5yjm:A (1.9) BS02 8W3 3.4.21.39 GO:0002003 ... P23946 29191554 MOAD: Kd=0.000000064M
    BindingDB: Kd=2.1nM, IC50=8.9nM
    432956 5yjo:A (2.135) BS01 ZN 2.1.1.354 GO:0000978 ... Q9H7B4 31223458
    432957 5yjo:A (2.135) BS02 ZN 2.1.1.354 GO:0000978 ... Q9H7B4 31223458
    432958 5yjo:A (2.135) BS03 ZN 2.1.1.354 GO:0000978 ... Q9H7B4 31223458
    432959 5yjo:A (2.135) BS04 8W0 2.1.1.354 GO:0000978 ... Q9H7B4 31223458
    432960 5yjo:A (2.135) BS05 SAM 2.1.1.354 GO:0000978 ... Q9H7B4 31223458
    432961 5yjp:A (1.8) BS01 ZN 3.4.21.39 GO:0002003 ... P23946 29191554
    432962 5yjp:A (1.8) BS02 8W6 3.4.21.39 GO:0002003 ... P23946 29191554 MOAD: ic50=0.24uM
    BindingDB: IC50=240nM
    432963 5yjs:A (2.16) BS01 SAL ? GO:0046872 ... A0A452CSM5 30181145
    432964 5yjs:A (2.16) BS02 CU1 ? GO:0046872 ... A0A452CSM5 30181145
    432965 5yjs:B (2.16) BS01 SAL ? GO:0046872 ... A0A452CSM5 30181145
    432966 5yjs:B (2.16) BS02 CU1 ? GO:0046872 ... A0A452CSM5 30181145
    432967 5yjw:A (1.85) BS01 FAD 1.6.5.9 GO:0003954 ... P32340 29402945
    432968 5yjw:A (1.85) BS02 MG 1.6.5.9 GO:0003954 ... P32340 29402945
    432969 5yjw:A (1.85) BS03 MG 1.6.5.9 GO:0003954 ... P32340 29402945
    432970 5yjw:A (1.85) BS04 MG 1.6.5.9 GO:0003954 ... P32340 29402945
    432971 5yjw:A (1.85) BS05 SMA 1.6.5.9 GO:0003954 ... P32340 29402945 MOAD: ic50=107nM
    432972 5yjw:A (1.85) BS06 SMA 1.6.5.9 GO:0003954 ... P32340 29402945 MOAD: ic50=107nM
    432973 5yjx:A (3.21) BS01 FAD 1.6.5.9 GO:0003954 ... P32340 29402945
    432974 5yjx:A (3.21) BS02 MG 1.6.5.9 GO:0003954 ... P32340 29402945
    432975 5yjx:A (3.21) BS03 MG 1.6.5.9 GO:0003954 ... P32340 29402945
    432976 5yjx:A (3.21) BS04 MG 1.6.5.9 GO:0003954 ... P32340 29402945
    432977 5yjx:A (3.21) BS05 MG 1.6.5.9 GO:0003954 ... P32340 29402945
    432978 5yjx:A (3.21) BS06 MYX 1.6.5.9 GO:0003954 ... P32340 29402945
    432979 5yjx:B (3.21) BS01 FAD 1.6.5.9 GO:0003954 ... P32340 29402945
    432980 5yjx:B (3.21) BS02 MG 1.6.5.9 GO:0003954 ... P32340 29402945
    432981 5yjx:B (3.21) BS03 MG 1.6.5.9 GO:0003954 ... P32340 29402945
    432982 5yjx:B (3.21) BS04 MG 1.6.5.9 GO:0003954 ... P32340 29402945
    432983 5yjx:B (3.21) BS05 MG 1.6.5.9 GO:0003954 ... P32340 29402945
    432984 5yjx:B (3.21) BS06 MYX 1.6.5.9 GO:0003954 ... P32340 29402945
    432985 5yjy:A (3.4) BS01 FAD 1.6.5.9 GO:0003954 ... P32340 29402945
    432986 5yjy:A (3.4) BS02 MG 1.6.5.9 GO:0003954 ... P32340 29402945
    432987 5yjy:A (3.4) BS03 MG 1.6.5.9 GO:0003954 ... P32340 29402945
    432988 5yjy:A (3.4) BS04 MG 1.6.5.9 GO:0003954 ... P32340 29402945
    432989 5yjy:A (3.4) BS05 MG 1.6.5.9 GO:0003954 ... P32340 29402945
    432990 5yjy:A (3.4) BS06 8WF 1.6.5.9 GO:0003954 ... P32340 29402945
    432991 5yjy:B (3.4) BS01 FAD 1.6.5.9 GO:0003954 ... P32340 29402945
    432992 5yjy:B (3.4) BS02 MG 1.6.5.9 GO:0003954 ... P32340 29402945
    432993 5yjy:B (3.4) BS03 MG 1.6.5.9 GO:0003954 ... P32340 29402945
    432994 5yjy:B (3.4) BS04 MG 1.6.5.9 GO:0003954 ... P32340 29402945
    432995 5yjy:B (3.4) BS05 8WF 1.6.5.9 GO:0003954 ... P32340 29402945
    432996 5yk0:A (2.102) BS01 ADP ? GO:0005524 ... O53343 29350349
    432997 5yk1:A (2.103) BS01 ANP ? GO:0005524 ... O53343 29350349
    432998 5yk2:A (2.807) BS01 ERY ? GO:0005524 ... O53343 29350349
    432999 5yk4:A (2.97) BS01 ADP ? GO:0003677 ... Q5F5J4 29182773
    433000 5yk4:B (2.97) BS01 ADP ? GO:0003677 ... Q5F5J4 29182773

    Reference:
  • Chengxin Zhang, Xi Zhang, Lydia Freddolino, and Yang Zhang. BioLiP2: an updated structure database for biologically relevent ligand-protein interactions, Nucleic Acids Research, gkad630 (2023).
  • Jianyi Yang, Ambrish Roy, and Yang Zhang. BioLiP: a semi-manually curated database for biologically relevant ligand-protein interactions, Nucleic Acids Research, 41: D1096-D1103 (2013) (download the PDF file).